BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G29130.1
Length=2070
Score E
Sequences producing significant alignments: (Bits) Value
Ahg497195 jgi|Araly1|497195|fgenesh2_kg.41__3__AT2G29130.1 2918 0.0
Ahg933387 jgi|Araly1|933387|scaffold_401375.1 2806 0.0
> Ahg497195 jgi|Araly1|497195|fgenesh2_kg.41__3__AT2G29130.1
Length=2038
Score = 2918 bits (1580), Expect = 0.0
Identities = 1919/2076 (92%), Gaps = 50/2076 (2%)
Strand=Plus/Plus
Query 3 ATATAAAACATATAACTTTCCTTCAATATTCAAACAAATATTGAACATGGTTACGTGGGT 62
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATATAAAACATATATCTTTCCTTCAATATTCAAACAAATATTGAACATGGTTACGTGGGT 60
Query 63 TTTGAATTATCTTCTTGTGGCATTTCT-ATTTGCCATTAGTTACAACATCGATGCAGCAT 121
|||| |||||||||| ||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 61 TTTGCATTATCTTCTCGTGGCATTTCTGA-TTGCCATTAGTTACAACATCGATGCAGCAT 119
Query 122 CTGCAGGAATCACGCGGCACTACCAATTCGATATTCAACTGAAAAACATCACAAGGTTGT 181
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 120 CTGCAGGAATCACGCGGCACTACCAGTTCGATATTCAACTGAAAAACATCACAAGATTGT 179
Query 182 GCAAGACAAAAACAATCGTGACGGTCAACGGAAAATTCCCAGGACCT-AGAGTTACCGCA 240
||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||
Sbjct 180 GCAAGACGAAAACAATCGTGACGGTCAATGGAAAATTCCCAGGACCTAAG-GTTACCGCA 238
Query 241 AGAGAAGGAGATAATCTACAAATCAAAGTTGTTAATCATGTATCCAATAACATTTCTATA 300
|||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 239 AGAGAAGGAGATAATCTACAGATCAAAGTTGTTAATCATGTCTCTAATAACATTTCTATC 298
Query 301 CATTGGCATGGTATCCGGCAGCTAAGGAGTGGTTGGGCGGATGGACCGTCCTATGTGACA 360
|| ||||| |||||||||||||||||||| || |||||||||||||| || |||||||||
Sbjct 299 CACTGGCACGGTATCCGGCAGCTAAGGAGCGGATGGGCGGATGGACCATCGTATGTGACA 358
Query 361 CAATGTCCAATTCGGATGGGACAAAGTTATGTTTACAACTTCACGGTGACTGGACAAAGA 420
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 CAATGTCCAATTCGGACCGGACAAAGTTATGTTTACAACTTCACGGTGACTGGACAAAGA 418
Query 421 GGAACCTTGTGGTGGCATGCTCATATTCAGTGGATGAGAGCTACTGTGTACGGACCATTA 480
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct 419 GGAACCTTGTGGTGGCATGCTCATATTCAATGGATGAGAGCTACCGTGTACGGACCTTTG 478
Query 481 ATCATTCTCCCTAAGCTTCATCAGCCTTACCCTTTTCCCAAACCCTACAAACAAGTCCCT 540
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 ATCATTCTCCCTAAACTCCATCAGCCTTACCCTTTTCCCAAACCCTACAAACAAGTCCCT 538
Query 541 ATACTCTTTGGTGAGTGGTTTAATGCTGATCCTCAAGCAGTGGTGCAACAAGCTCTTCAG 600
||| |||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 539 ATAATCTTTGGTGAATGGTTTAATGCTGATCCTCAAGCAGTGCTACAACAAGCTCTTCAG 598
Query 601 ACGGGTGCAGGTCCAAATGCATCTGATGCTCATACTTTTAATGGGCTCCCAGGTCCATTA 660
||||||||||| |||||||| ||||||||||| || |||||||||| ||||||||||||
Sbjct 599 ACGGGTGCAGGCCCAAATGCTTCTGATGCTCA-CCTCTTAATGGGCTTCCAGGTCCATTA 657
Query 661 TACAATTGCTCTACAAAA-G---ACACATACAAACTGATGGTGAAACCTGGAAAGACGTA 716
|||||||||||||||||| | | || |||||||||||||| |||||||||||||||||
Sbjct 658 TACAATTGCTCTACAAAAGGTAAATACGTACAAACTGATGGTAAAACCTGGAAAGACGTA 717
Query 717 TCTACTACGATTAATCAATGCTGCACTCAATGACGAACTCTTCTTCACCATAGCCAATCA 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 TCTACTACGATTAATCAATGCTGCACTCAATGACGAACTCTTCTTCACCATAGCCAATCA 777
Query 777 TACATTGACGGTCGTAGAAGCGGATGCTTGCTACGTTAAACCATTTCAAACCAACATCGT 836
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 778 TACATTGACGGTCGTAGAAGCGGATGCTTGCTACGTTAAACCATTCCAAACCAACACCGT 837
Query 837 GCTTCTCGGCCCGGGCCAAACCA-CCAATGTACTACTCAAAACCAAACCTATTTATCCAA 895
|||| |||| |||||| |||| | |||| |||||||||||||||||||||||||||||||
Sbjct 838 GCTTATCGGTCCGGGC-AAACAAACCAACGTACTACTCAAAACCAAACCTATTTATCCAA 896
Query 896 ATGCAACCTTCTACATGTTGGCAAGACCGTACTTCACGGGCCAAGGAACAATTGATAATA 955
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 897 ATGCAACCTTTTACATGTTGGCAAGACCGTACTTTACGGGCCAAGGAACAATTGATAATA 956
Query 956 CAACCGTCGCGGGAATTCTCCAATACCAACATCATACCAAGTCTTCTAAGAATCTTTCTA 1015
||||||| |||||||||||||||||||| |||||| |||| |||||||||||||||||||
Sbjct 957 CAACCGTTGCGGGAATTCTCCAATACCATCATCATTCCAAATCTTCTAAGAATCTTTCTA 1016
Query 1016 TCATTAAACCATCTCTCCCTCCCATCAATAGCACTAGCTACGCCGCAAATTTCACAAAGA 1075
| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |
Sbjct 1017 TTATTAAACCATCTCTCCCTCCCATCAATAGTACGAGCTACGCCGCAAATTTCACAAAAA 1076
Query 1076 TGTTTAGAAGTTTGGCAAGTTCTACATTTCCGGCAAACGTGCCAAAAGTCGTGGACAAAC 1135
||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||
Sbjct 1077 TGTTTAGAAGTTTGGCAAGTTCTACATTTCCGGTAAACGCGCCAAAAACCGTGGACAAAA 1136
Query 1136 AATATTTCTTTGCCATCGGTTTAGGAACCAACCCTTGTCCTAAAAACCAAACATGCCAAG 1195
||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1137 AATATTTCTTTACCGTCGGTCTAGGAACCAACCCTTGTCCTAAAAACCAAACATGCCAAG 1196
Query 1196 GACCAACTAATACAACGAAATTTGCAGCATCTATCAACAACGTGTCTTTCATCTTACCAA 1255
||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1197 GACCAACTAATGCAACGAAATTTGCAGCATCTATCAACAATGTCTCTTTCATCTTACCAA 1256
Query 1256 ACAAGACTTCTCTATTACAATCATACTTCGTTGGCAAATCCAAGAATGTTTTCATGACCG 1315
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1257 ACAAGACTTCTCTATTACAATCATACTTCGTTGGCAAGTCCAACAATGTTTTCATGACCG 1316
Query 1316 ATTTCCCAACTGCCCCTATTATTCCATTTAATTACACGGGTACGCCACCAAACAACACAA 1375
||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||
Sbjct 1317 ATTTCCCAACTGCCCCTTTTTTTCCATTTAATTACACGGGGACGCCACCAAACAACACAA 1376
Query 1376 TGGTCTCAAGAGGGACCAAAGTTGTGGTCTTGAAGTACAAGACAACTGTTGAATTGGTGT 1435
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1377 TGGTCTCAAGAGGGACCAAAGTTGTGGTCTTGAAGTACAACACAACTGTTGAATTGGTGT 1436
Query 1436 TACAGGGCACTAGCATCTTGGGTATTGAGGCCCACCCTATACATCTTCATGGCTTCAACT 1495
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1437 TACAGGGCACTAGCATCTTGGGTATTGAGGCCCACCCTGTACATCTTCATGGCTTCAACT 1496
Query 1496 TTTATGTGGTGGGTCAAGGCTTTGGCAATTTTAACCCGGCCCGTGACCCAAAACATTATA 1555
|||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||
Sbjct 1497 TTTATGTGGTGGGTCAAGGCTTCGGCAATTTTAACCCGGCCCGTGACCCAAAGCAATATA 1556
Query 1556 ACCTAGTCGATCCGGTCGAACGAAACACCATCAATATCCCTTCCGGTGGATGGGTCGCCA 1615
| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 1557 ATCTAGTCGATCCGGTCGAACGAAACACCATCAATGTCCCTTCCGGTGGTTGGGTCGCCA 1616
Query 1616 TCCGCTTCCTTGCCGATAATCCCGGTGTGTGGCTGATGCATTGCCACATTGAGATTCATT 1675
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 TCCGCTTCCTCGCCGATAATCCCGGTGTGTGGCTGATGCATTGCCACATTGAGATTCATT 1676
Query 1676 TGAGTTGGGGTCTGACCATGGCTTGGGTTGTTTTGGACGGTGACCTTCCAAATCAG-AAG 1734
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 1677 TGAGTTGGGGTCTGACCATGGCTTGGGTGGTTTTGGACGGTGACCTTCCAAATCAGGAA- 1735
Query 1735 CTCCTTCCTCCACCCTCAGATTTCCCTAAATGTTGACTATGACCGATCCAACGCCTCTGC 1794
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 1736 CTCCTTCCTCCACCCTCAGATTTCCCTAAATGTTGACTCTGACCGATCCAACGCCTCTAC 1795
Query 1795 AAATGCCACATCACCTTTTTCCCTTTCTTGGAATGATATTTC-TGAAGTGCAATATATGT 1853
|||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct 1796 AAATGCCACATCACCTTTTTCCCTTTCTTGGAATGATATTTCCTTA-GTGCAATATATG- 1853
Query 1854 CTctttttcgtttttttttcttcattttatttctttcctctttaatacttttgt---gtt 1910
|| | | | |||| | || |||| || |||||||||||| ||||||||| |||
Sbjct 1854 CT-TCT--C-TTTTGCCAT-TT--TTTT-TT-CTTTCCTCTTTA-TACTTTTGTCATGTT 1903
Query 1911 ttgagatttctgagtttttttATCCCTTTGCTTGATGATTTGTTGTATAAAGAGTGAACT 1970
||||||||||||||||||||| | ||| ||| | ||| || | | || |
Sbjct 1904 TTGAGATTTCTGAGTTTTTTTTTTT-TTT-CTTTTTTTTTTTTTTTTTTTTTTTTG---T 1958
Query 1971 GAAAAACGATGGTCGCGTTAGTAATTTCTGTGTACGATATGTTGACGCAAAATAAATAAT 2030
||||| || | | | | | || |||||||||| |||||||||||||||||||
Sbjct 1959 -AAAAA-GA-G-T-G----A--A----CT-TGTACGATATTTTGACGCAAAATAAATAAT 2002
Query 2031 CGTAAAGTTTTGTAATAAACGAAAAAGGCATTAGCA 2066
||||||||||||| ||| |||||||||||||||||
Sbjct 2003 TGTAAAGTTTTGTACTAATCGAAAAAGGCATTAGCA 2038
> Ahg933387 jgi|Araly1|933387|scaffold_401375.1
Length=1762
Score = 2806 bits (1519), Expect = 0.0
Identities = 1683/1764 (95%), Gaps = 4/1764 (0%)
Strand=Plus/Plus
Query 29 TATTCAAACAAATATTGAACATGGTTACGTGGGTTTTGAATTATCTTCTTGTGGCATTTC 88
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 1 TATTCAAACAAATATTGAACATGGTTACGTGGGTTTTGCATTATCTTCTCGTGGCATTTC 60
Query 89 T-ATTTGCCATTAGTTACAACATCGATGCAGCATCTGCAGGAATCACGCGGCACTACCAA 147
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TGA-TTGCCATTAGTTACAACATCGATGCAGCATCTGCAGGAATCACGCGGCACTACCAG 119
Query 148 TTCGATATTCAACTGAAAAACATCACAAGGTTGTGCAAGACAAAAACAATCGTGACGGTC 207
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 120 TTCGATATTCAACTGAAAAACATCACAAGATTGTGCAAGACGAAAACAATCGTGACGGTC 179
Query 208 AACGGAAAATTCCCAGGACCT-AGAGTTACCGCAAGAGAAGGAGATAATCTACAAATCAA 266
|| |||||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 180 AATGGAAAATTCCCAGGACCTAAG-GTTACCGCAAGAGAAGGAGATAATCTACAGATCAA 238
Query 267 AGTTGTTAATCATGTATCCAATAACATTTCTATACATTGGCATGGTATCCGGCAGCTAAG 326
||||||||||||||| || |||||||||||||| || ||||| |||||||||||||||||
Sbjct 239 AGTTGTTAATCATGTCTCTAATAACATTTCTATCCACTGGCACGGTATCCGGCAGCTAAG 298
Query 327 GAGTGGTTGGGCGGATGGACCGTCCTATGTGACACAATGTCCAATTCGGATGGGACAAAG 386
||| || |||||||||||||| || ||||||||||||||||||||||||| ||||||||
Sbjct 299 GAGCGGATGGGCGGATGGACCATCGTATGTGACACAATGTCCAATTCGGACCGGACAAAG 358
Query 387 TTATGTTTACAACTTCACGGTGACTGGACAAAGAGGAACCTTGTGGTGGCATGCTCATAT 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 TTATGTTTACAACTTCACGGTGACTGGACAAAGAGGAACCTTGTGGTGGCATGCTCATAT 418
Query 447 TCAGTGGATGAGAGCTACTGTGTACGGACCATTAATCATTCTCCCTAAGCTTCATCAGCC 506
||| |||||||||||||| ||||||||||| || |||||||||||||| || ||||||||
Sbjct 419 TCAATGGATGAGAGCTACCGTGTACGGACCTTTGATCATTCTCCCTAAACTCCATCAGCC 478
Query 507 TTACCCTTTTCCCAAACCCTACAAACAAGTCCCTATACTCTTTGGTGAGTGGTTTAATGC 566
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 479 TTACCCTTTTCCCAAACCCTACAAACAAGTCCCTATAATCTTTGGTGAATGGTTTAATGC 538
Query 567 TGATCCTCAAGCAGTGGTGCAACAAGCTCTTCAGACGGGTGCAGGTCCAAATGCATCTGA 626
|||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||||
Sbjct 539 TGATCCTCAAGCAGTGCTACAACAAGCTCTTCAGACGGGTGCAGGCCCAAATGCTTCTGA 598
Query 627 TGCTCATACTTTTAATGGGCTCCCAGGTCCATTATACAATTGCTCTACAAAAGACACATA 686
||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct 599 TGCTCATACTTTTAATGGGCTTCCAGGTCCATTATACAATTGCTCTACAAAAGATACGTA 658
Query 687 CAAACTGATGGTGAAACCTGGAAAGACGTATCTACTACGATTAATCAATGCTGCACTCAA 746
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 CAAACTGATGGTAAAACCTGGAAAGACGTATCTACTACGATTAATCAATGCTGCACTCAA 718
Query 747 TGACGAACTCTTCTTCACCATAGCCAATCATACATTGACGGTCGTAGAAGCGGATGCTTG 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 TGACGAACTCTTCTTCACCATAGCCAATCATACATTGACGGTCGTAGAAGCGGATGCTTG 778
Query 807 CTACGTTAAACCATTTCAAACCAACATCGTGCTTCTCGGCCCGGGCCAAACCACCAATGT 866
||||||||||||||| |||||||||| |||||||||||| || |||||||||||||| ||
Sbjct 779 CTACGTTAAACCATTCCAAACCAACACCGTGCTTCTCGGTCCAGGCCAAACCACCAACGT 838
Query 867 ACTACTCAAAACCAAACCTATTTATCCAAATGCAACCTTCTACATGTTGGCAAGACCGTA 926
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 839 ACTACTCAAAACCAAACCTATTTATCCAAATGCAACCTTTTACATGTTGGCAAGACCGTA 898
Query 927 CTTCACGGGCCAAGGAACAATTGATAATACAACCGTCGCGGGAATTCTCCAATACCAACA 986
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 899 CTTTACGGGCCAAGGAACAATTGATAATACAACCGTTGCGGGAATTCTCCAATACCATCA 958
Query 987 TCATACCAAGTCTTCTAAGAATCTTTCTATCATTAAACCATCTCTCCCTCCCATCAATAG 1046
|||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 959 TCATTCCAAATCTTCTAAGAATCTTTCTATTATTAAACCATCTCTCCCTCCCATCAATAG 1018
Query 1047 CACTAGCTACGCCGCAAATTTCACAAAGATGTTTAGAAGTTTGGCAAGTTCTACATTTCC 1106
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1019 TACGAGCTACGCCGCAAATTTCACAAAAATGTTTAGAAGTTTGGCAAGTTCTACATTTCC 1078
Query 1107 GGCAAACGTGCCAAAAGTCGTGGACAAACAATATTTCTTTGCCATCGGTTTAGGAACCAA 1166
|| ||||||||||||| |||||||||| ||||||||||| || ||||| ||||||||||
Sbjct 1079 GGTAAACGTGCCAAAAACCGTGGACAAAAAATATTTCTTTACCGTCGGTCTAGGAACCAA 1138
Query 1167 CCCTTGTCCTAAAAACCAAACATGCCAAGGACCAACTAATACAACGAAATTTGCAGCATC 1226
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1139 CCCTTGTCCTAAAAACCAAACATGCCAAGGACCAACTAATGCAACGAAATTTGCAGCATC 1198
Query 1227 TATCAACAACGTGTCTTTCATCTTACCAAACAAGACTTCTCTATTACAATCATACTTCGT 1286
||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1199 TATCAACAATGTCTCTTTCATCTTACCAGACAAGACTTCTCTATTACAATCATACTTCGT 1258
Query 1287 TGGCAAATCCAAGAATGTTTTCATGACCGATTTCCCAACTGCCCCTATTATTCCATTTAA 1346
|||||| ||||| ||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1259 TGGCAAGTCCAACAATGTTTTCATGACCGATTTCCCAACTGCCCCTTTTTTTCCATTTAA 1318
Query 1347 TTACACGGGTACGCCACCAAACAACACAATGGTCTCAAGAGGGACCAAAGTTGTGGTCTT 1406
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 TTACACGGGGACGCCACCAAACAACACAATGGTCTCAAGAGGGACCAAAGTTGTGGTCTT 1378
Query 1407 GAAGTACAAGACAACTGTTGAATTGGTGTTACAGGGCACTAGCATCTTGGGTATTGAGGC 1466
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 GAAGTACAACACAACTGTTGAATTGGTGTTACAGGGCACTAGCATCTTGGGTATTGAGGC 1438
Query 1467 CCACCCTATACATCTTCATGGCTTCAACTTTTATGTGGTGGGTCAAGGCTTTGGCAATTT 1526
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1439 CCACCCTGTACATCTTCATGGCTTCAACTTTTATGTGGTGGGTCAAGGCTTCGGCAATTT 1498
Query 1527 TAACCCGGCCCGTGACCCAAAACATTATAACCTAGTCGATCCGGTCGAACGAAACACCAT 1586
||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct 1499 TAACCCGGCCCGTGACCCAAAGCAATATAATCTAGTCGATCCGGTCGAACGAAACACCAT 1558
Query 1587 CAATATCCCTTCCGGTGGATGGGTCGCCATCCGCTTCCTTGCCGATAATCCCGGTGTGTG 1646
|||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1559 CAATGTCCCTTCCGGTGGTTGGGTCGCCATCCGCTTCCTCGCCGATAATCCCGGTGTGTG 1618
Query 1647 GCTGATGCATTGCCACATTGAGATTCATTTGAGTTGGGGTCTGACCATGGCTTGGGTTGT 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1619 GCTGATGCATTGCCACATTGAGATTCATTTGAGTTGGGGTCTGACCATGGCTTGGGTGGT 1678
Query 1707 TTTGGACGGTGACCTTCCAAATCAGAAGCTCCTTCCTCCACCCTCAGATTTCCCTAAATG 1766
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1679 TTTGGACGGTGACCTTCCAAATCAGAAACTCCTTCCTCCACCCTCAGATTTCCCTAAATG 1738
Query 1767 TTGACTATGACCGATCCAACGCCT 1790
|||||| |||||||||||||||||
Sbjct 1739 TTGACTCTGACCGATCCAACGCCT 1762
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77856460780
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5