BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G29150.1
Length=807
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481835 jgi|Araly1|481835|fgenesh2_kg.4__895__AT2G29150.1 1179 0.0
Ahg497196 jgi|Araly1|497196|fgenesh2_kg.41__4__AT2G29150.1 1147 0.0
Ahg481852 jgi|Araly1|481852|fgenesh2_kg.4__912__AT2G29360.1 811 0.0
Ahg481850 jgi|Araly1|481850|fgenesh2_kg.4__910__AT2G29350.1 797 0.0
Ahg481853 jgi|Araly1|481853|fgenesh2_kg.4__913__AT2G29370.1 784 0.0
> Ahg481835 jgi|Araly1|481835|fgenesh2_kg.4__895__AT2G29150.1
Length=798
Score = 1179 bits (638), Expect = 0.0
Identities = 750/803 (93%), Gaps = 11/803 (1%)
Strand=Plus/Plus
Query 1 ATGGCTAAAG-CAGGAGAAAACTCGAGAGACAAATCTAGATGGAGCCTTGAAGGCATGAC 59
|||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCT-AAGACAGGAGAAAACTTGAGAGACAAATCTAGATGGAGCCTTGAAGGCATGAC 59
Query 60 CGCTCTTGTTACAGGTGGCTCCAAAGGCCTCGGAGAAGCTGTAGTGGAGGAACTAGCCAT 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 CGCTCTTGTTACCGGTGGCTCCAAAGGCCTCGGAGAAGCTGTAGTGGAGGAACTAGCCAT 119
Query 120 GTTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACG 179
||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 120 GTTTGGAGCAAGAGTCCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGATTACG 179
Query 180 TGAATGGCAAGCCAAAGGATTTGAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCGTGA 239
|||||||||||| ||||| ||| | |||||||||||||||||||| || |||||||||||
Sbjct 180 TGAATGGCAAGCAAAAGGGTTTCAAGTCACCACTTCTGTCTGCGATGTTTCTTCTCGTGA 239
Query 240 GCAACGAGAGAAACTCATGGAAACCGTTTCCTCTGTCTTCCAAGGAAAACTCAACATCCT 299
||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 240 CCAACGAGAGAAACTCATGGAAACCGTTGCCTCTCTCTTCCAAGGAAAACTCAACATCCT 299
Query 300 CGTAAATAATGCGGGAACGGGTATAATAAAGCCGAGTACAGAGTATACAGCAGAAGATTA 359
|||||| |||||||||||||||||| ||||||||| || ||||||||||| | |||||||
Sbjct 300 CGTAAACAATGCGGGAACGGGTATACTAAAGCCGACTATAGAGTATACAGAACAAGATTA 359
Query 360 CTCGTTTCTGATGGCTACAAATCTCGAGTCCGCTTTTCATCTCTCACAGATCGCGCACCC 419
|||||||| ||||||||||||||||||||||||||||||||| |||||| |||| || ||
Sbjct 360 CTCGTTTCAGATGGCTACAAATCTCGAGTCCGCTTTTCATCTATCACAGCTCGCTCATCC 419
Query 420 TTTGTTGAAAGCCTCTG-GTTCCGGGAGCATCGTGTTCATGTCCTCTGTTGCTGGACTTG 478
||| || ||||| || | || |||||||||||||||||||||||||||||||||||||
Sbjct 420 TTTATTAAAAGCTTC-GAATTTAGGGAGCATCGTGTTCATGTCCTCTGTTGCTGGACTTG 478
Query 479 TGCATACCGGTGCATCAATCTATGGAGCATCTAAAGGAGCTATGAATCAGCTAGGAAGAA 538
| |||||||||||||| |||||||||||| | |||||||||||||||||||||||||| |
Sbjct 479 TACATACCGGTGCATCCATCTATGGAGCAACCAAAGGAGCTATGAATCAGCTAGGAAG-A 537
Query 539 G-CTTAGCATGCGAGTGGGCAAGTGACAACATAAGGGTTAACTCTGTGTGTCCATGGGTC 597
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 538 GACTTAGCATGCGAGTGGGCAAGTGACAACATAAGGGTTAACTCGGTGTGTCCATGGGTC 597
Query 598 ATAACAACTCCTTTAACTAGCTTTATTTTCAGTGATGAAAAGTTAAGAAAAGCAGTGGAG 657
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 598 ATAACAACTCCTTTAACTAGCTTTA--TT-AGTGATGAAAAGTTAAGAAAAGCAGTGGAG 654
Query 658 GATAAGACACCAATGGGACGTGTTGGAGAAGCAAATGAAGTATCATCGCTTGTCGCATTT 717
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 655 GATAAGACACCAATGGGACGTGTTGGAGAAGTGAATGAAGTATCATCGCTTGTCGCATTT 714
Query 718 CTCTGTTTTCCGGCAGCTTCTTATATTACAGGTCAGACTATCTGCGTCGACGGAGGTG-C 776
|| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| |
Sbjct 715 CTTTGTTTTCCGGCAGCTTCTTATATAACTGGTCAGACTATCTGCGTCGACGGAGGTGTC 774
Query 777 TTCGGTGAATGGCTTCTCTTTCA 799
| ||||||| |||||||||||||
Sbjct 775 T-CGGTGAACGGCTTCTCTTTCA 796
> Ahg497196 jgi|Araly1|497196|fgenesh2_kg.41__4__AT2G29150.1
Length=804
Score = 1147 bits (621), Expect = 0.0
Identities = 746/807 (92%), Gaps = 6/807 (1%)
Strand=Plus/Plus
Query 1 ATGGCTAAAG-CAGGAGAAAACTCGAGAGACAAATCTAGATGGAGCCTTGAAGGCATGAC 59
|||||| ||| |||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 1 ATGGCT-AAGACAGGAGAAAACTTGACAGACAAATCTAGATGGAGCCTTGGAGGCATGAC 59
Query 60 CGCTCTTGTTACAGGTGGCTCCAAAGGCCTCGGAGAAGCTGTAGTGGAGGAACTAGCCAT 119
||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 60 CGCTCTTGTGACCGGTGGCTCCAAAGGCCTCGGAGAAGCTGTGGTGGAGGAACTAGCCAT 119
Query 120 GTTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACG 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GTTGGGAGCAAGAGTCCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACG 179
Query 180 TGAATGGCAAGCCAAAGGATTTGAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCGTGA 239
||| ||||||| ||||| ||| |||||||||||||||| |||||||| |||||||||||
Sbjct 180 TGAGTGGCAAGGAAAAGGGTTTCAGGTCACCACTTCTGTATGCGACGTTTCTTCTCGTGA 239
Query 240 GCAACGAGAGAAACTCATGGAAACCGTTTCCTCTGTCTTCCAAGGAAAACTCAACATCCT 299
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 240 CCAACGAGAGAAACTCATGGAAACCGTTTCCTCTATCTTCCAAGGAAAACTCAACATCCT 299
Query 300 CGTAAATAATGCGGGAACGGGTATAATAAAGCCGAGTACAGAGTATACAGCAGAAGATTA 359
||||| |||||||||||| |||||| |||||||| ||| |||| ||||||| |||||||
Sbjct 300 CGTAAGTAATGCGGGAACCGGTATAGCAAAGCCGACTACTGAGTTTACAGCACAAGATTA 359
Query 360 CTCGTTTCTGATGGCTACAAATCTCGAGTCCGCTTTTCATCTCTCACAGATCGCGCACCC 419
|||||||||||||||||||||||||||||| ||||||||| |||||||| | || || ||
Sbjct 360 CTCGTTTCTGATGGCTACAAATCTCGAGTCAGCTTTTCATATCTCACAGCTTGCTCATCC 419
Query 420 TTTGTTGAAAGCCTCTGGTTCCGGGAGCATCGTGTTCATGTCCTCTGTTGCTGGACTTGT 479
||| || ||||| || ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 420 TTTATTAAAAGCTTCAAGTTTAGGGAGCATCGTGTTCATGTCCTCTGTTGCTGGACTTGT 479
Query 480 GCATACCGGTGCATCAATCTATGGAGCATCTAAAGGAGCTATGAATCAGCTAGGAAGAAG 539
|||||| |||||||| |||||||||||| | ||||||||||||||||||||||||||||
Sbjct 480 GCATACTGGTGCATCCATCTATGGAGCAACAAAAGGAGCTATGAATCAGCTAGGAAGAAA 539
Query 540 CTTAGCATGCGAGTGGGCAAGTGACAACATAAGGGTTAACTCTGTGTGTCCATGGGTCAT 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CTTAGCATGCGAGTGGGCAAGTGACAACATAAGGGTTAACTCTGTGTGTCCATGGGTCAT 599
Query 600 AACAACTCCTTTAACTAGCTTTATTTTCAGTGATGAAAAGTT-AAGAAAAGCAGTGGAG- 657
| ||||||||||| | ||| ||||||||||||||||| |||| || |||||||||||||
Sbjct 600 AGCAACTCCTTTAGCCAGCATTATTTTCAGTGATGAAGAGTTTAA-AAAAGCAGTGGAGA 658
Query 658 GATAAGACACCAATGGGACGTGTTGGAGAAGCAAATGAAGTATCATCGCTTGTCGCATTT 717
| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 659 G-TAAGACACCAATGGGACGTGTTGGAAAAGCAAATGAAGTCTCATCGCTTGTCGCATTT 717
Query 718 CTCTGTTTTCCGGCAGCTTCTTATATTACAGGTCAGACTATCTGCGTCGACGGAGGTGCT 777
|||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||
Sbjct 718 CTCTGTTTTCCGGCAGCTTCTTATATAACGGGTCAGACTATCTGTGTCGATGGAGGTGCC 777
Query 778 TCGGTGAATGGCTTCTCTTTCAAGCCT 804
|||||||| ||||||||||||||||||
Sbjct 778 TCGGTGAACGGCTTCTCTTTCAAGCCT 804
> Ahg481852 jgi|Araly1|481852|fgenesh2_kg.4__912__AT2G29360.1
Length=864
Score = 811 bits (439), Expect = 0.0
Identities = 689/806 (85%), Gaps = 31/806 (4%)
Strand=Plus/Plus
Query 16 GAAAACTCGAGAGACAAATCTAGATGGAGCCTTGAAGGCATGACCGCTCTTGTTACAGGT 75
|||| || |||||||||| |||||||||| |||| ||||||||||||||||||||| |||
Sbjct 61 GAAAGCTTGAGAGACAAACCTAGATGGAGTCTTGTAGGCATGACCGCTCTTGTTACCGGT 120
Query 76 GGCTCCAAAGGCCTCGGAGAAGCTGTAGTGGAGGAACTAGCCATGTTGGGAGCAAGAGTT 135
|||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 121 GGCTCCAAAGGCATCGGAGAAGCTGTGGTGGAGGAACTAGCTATGTTAGGAGCAAGAGTC 180
Query 136 CACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACGTGAA-TGGCAAGCCAA 194
|||||||||||||||||||||||| ||||||||||| |||||||| || |||||||| ||
Sbjct 181 CACACATGTGCCAGAGACGAAACTAAGCTTCAAGAAAGCTTACGT-AACTGGCAAGCAAA 239
Query 195 AGGATTTGAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCGTGAG-CAACGAGAGAAAC 253
||| ||| |||| ||||||||||| | |||| | |||||||||| | |||||||||||||
Sbjct 240 AGGGTTTCAGGTTACCACTTCTGTTTCCGACATTTCTTCTCGTG-GCCAACGAGAGAAAC 298
Query 254 TCATGGAAACCGTTTCCTCTG-TCTTCCAAGGAAAACTCAACATCCTCGTAAATAATGCG 312
| |||||||| |||||| | | |||| ||||||||||||| || || ||||| |||| |
Sbjct 299 TTATGGAAACTGTTTCCAC-GATCTTTGAAGGAAAACTCAATATACTTGTAAACAATGTG 357
Query 313 GGAACGGGTATA-ATAAAGCCGA--GTACAGAGTATACAGCAGAAGATTACTCGTTT-CT 368
|||||| ||||| ||| |||| || | | ||||||| ||||||| ||| ||| |
Sbjct 358 GGAACGTGTATAGCCAAA-CCGACCTTA-A-AACATACAGCGGAAGATTTCTCATTTAC- 413
Query 369 GATGGCTACAAATCTCGAGTCCGCTTTTCATCTCTCACAGATCGCGCACCCTTTGTTGAA 428
||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 414 GATGGCTACAAATCTCGAGTCAACTTTTCATCTCTCACAGCTCGCGCACCCTTTGTTGAA 473
Query 429 AGCCTCTGGTTCCGGGAGCATCGTGTTCATGTCCTCTGT-TGCTGGACTTGTGCA--T-A 484
|||||||||||| |||||||||||| | || ||||| || | ||||| |||| || | |
Sbjct 474 AGCCTCTGGTTCAGGGAGCATCGTGCTAATCTCCTCCGTAT-CTGGAGTTGTACATGTCA 532
Query 485 CCGGTGCATCAATCTATGGAGCATCTAAAGGAGCTATGAATCAGCTAGGAAGAAGCTTAG 544
|||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 533 ATGGTGCATCCATCTATGGAGTATCTAAAGGAGCTATGAATCAGCTAGGAAGAAACTTAG 592
Query 545 CATGCGAGTGGGCAAGTGACAACATAAGGGTTAACTCTGTGTGTCCATGGGTCATA-ACA 603
||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||| | |
Sbjct 593 CATGCGAGTGGGCAAGTGACAACATTAGGACTAACTCTGTGTGTCCATGGTTCATAGA-A 651
Query 604 ACTCCTTTAACTAGCTTTA-TT-TTCAGTGATGAAAAGTTAAGAAAAGCAGTGGAG-GAT 660
||||||||| || | | || || ||| ||||| |||| ||||||| ||||||| | |
Sbjct 652 ACTCCTTTAGTTACCGA-AGTTCTT-AGTAATGAAGAGTTTAGAAAAGAAGTGGAGAG-T 708
Query 661 AAGACACCAATGGGACGTGTTGGAGAAGCAAATGAAGTATCATCGCTTGTCGCATTTCTC 720
| | |||||||||||||||||||||||| |||||||| ||||||||||| |||||||||
Sbjct 709 AGGCCACCAATGGGACGTGTTGGAGAAGTGAATGAAGTCTCATCGCTTGTTGCATTTCTC 768
Query 721 TGTTTTCCGGCAGCTTCTTATATTACAGGTCAGACTATCTGCGTCGACGGAGGTGCTTCG 780
||| |||| |||||||||||||| |||||||| || || ||||| || |||||| |||
Sbjct 769 TGTCTTCCTGCAGCTTCTTATATAACAGGTCAAACCATTTGCGTTGATGGAGGT--TTCA 826
Query 781 GTG--AATGGCTTCTCTTTCAAGCCT 804
|| ||||| |||||||| ||||||
Sbjct 827 CTGTTAATGGTTTCTCTTTTAAGCCT 852
> Ahg481850 jgi|Araly1|481850|fgenesh2_kg.4__910__AT2G29350.1
Length=1118
Score = 797 bits (431), Expect = 0.0
Identities = 671/786 (85%), Gaps = 20/786 (3%)
Strand=Plus/Plus
Query 26 GAGACAAATCTAGATGGAGCCTTGAAGGCATGACCGCTCTTGTTACAGGTGGCTCCAAAG 85
|||| || || |||||||| |||| |||||||| ||||||||| || |||||||| ||||
Sbjct 126 GAGAGAACTCAAGATGGAGTCTTGGAGGCATGAACGCTCTTGTCACTGGTGGCTCTAAAG 185
Query 86 GCCTCGGAGAAGCTGTAGTGGAGGAACTAGCCATGTTGGGAGCAAGAGTTCACACATGTG 145
|| |||| |||||||| || ||||||||||| || |||||||||||||| ||||||||||
Sbjct 186 GCATCGGGGAAGCTGTGGTAGAGGAACTAGCAATATTGGGAGCAAGAGTCCACACATGTG 245
Query 146 CCAGAGACGAAACTCAGCTTCAAGAACGCTTACGTGAATGGCAAGCCAAAGGATTTGAGG 205
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 246 CCAGAGACGAAACTCAGCTTCAAGAACGCTTACGTGAATGGCAAGCCAAAGGGTTTCAGG 305
Query 206 TCACCACTTCTGTCTGCGACGTCTCTTCTCGTGAGCAACGAGAGAAACTCATGGAAACCG 265
|||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |
Sbjct 306 TCACCACTTCTGTCTGCGACGTCTCTTCTCGTGACCAACGAGTGAAACTCATGGAAACTG 365
Query 266 TTTCCTCTGTCTTCCAAGGAAAACTCAACATCCTCGTAAATAATGCGGGAACGGGTATAA 325
|||||||| ||| |||||||||||||||||||||||| || |||| ||||||| |||
Sbjct 366 TTTCCTCTCTCTACCAAGGAAAACTCAACATCCTCGTCAACAATGTGGGAACGTCAATAT 425
Query 326 TAAAGCCGAGTACAGAGTATACAGCAGAAGATTACTCGTTTCTGATGGCTACAAATCTCG 385
| ||||||| |||||||||||||||||||||| ||| ||| | ||||||||||||||||
Sbjct 426 TCAAGCCGACCACAGAGTATACAGCAGAAGATTTCTCTTTTGTAATGGCTACAAATCTCG 485
Query 386 AGTCCGCTTTTCATCTCTCACAGATCGCGCACCCTTTGTTGAAAGCCTCTGGTTCCGGGA 445
|||| ||||| |||||||||||| | |||||||| |||||||||||||| || || ||||
Sbjct 486 AGTCAGCTTTCCATCTCTCACAGCTTGCGCACCCATTGTTGAAAGCCTCCGGCTCAGGGA 545
Query 446 GCATCGTGTTCATGTCCTCTGTTGCTGGACTTGTGCATACCG--GT-GCATCAATCTATG 502
|||||||| ||||||||||| ||||||| | |||||| | || | ||| |||||||
Sbjct 546 GCATCGTGCTCATGTCCTCTACTGCTGGAGTCGTGCATGTCAATGTTGGATCCATCTATG 605
Query 503 GAGCATCTAAAGGAGCTATGAATCAGCTAGGA-AGAAGCTTAGCATGCGAGTGGGCAAGT 561
||||| | |||||||| ||||||||||| || |||| |||||| ||||| ||||| ||
Sbjct 606 GAGCAACCAAAGGAGCCATGAATCAGCT-GGCTAGAAACTTAGCTTGCGAATGGGCGAGC 664
Query 562 GACAACATAAGGGTTAACTCTGTGTGTCCATGGGTCATA--ACAACTCCTTTAACTAGCT 619
|||||||||||| ||||||||| ||||| ||| | ||| |||||| |||| | || |
Sbjct 665 GACAACATAAGGACTAACTCTGTTTGTCCTTGG-T-ATATCACAACTTCTTTGAGTAACG 722
Query 620 -TTATTTTCAGTGATGAAAAGTT-AAGAAAAGCAGTGGAG-GATAAGACACCAATGGGAC 676
|| ||||| | ||||| |||| |||||| | || || | | || |||||| |||||||
Sbjct 723 ATT-TTTTC-G--ATGAAGAGTTTAAGAAA-GAAGCGGTGCG-TAGGACACCGATGGGAC 776
Query 677 GTGTTGGAGAAGCAAATGAAGTATCATCGCTTGTCGCATTTCTCTGTTTTCCGGCAGCTT 736
|||||||||| ||||||||||| ||||||||||| |||||||| ||| |||| |||||||
Sbjct 777 GTGTTGGAGAGGCAAATGAAGTCTCATCGCTTGTGGCATTTCTTTGTCTTCCTGCAGCTT 836
Query 737 CTTATATTACAGGTCAGACTATCTGCGTCGACGGAGGTGCTTCGGTGAATGG-CTTCTCT 795
|||||||||| |||||||| || || || ||||||||||| | || ||||| ||| ||
Sbjct 837 CTTATATTACTGGTCAGACCATTTGTGTTGACGGAGGTGCCACTGTCAATGGTCTT-TCC 895
Query 796 TTCAAG 801
||||||
Sbjct 896 TTCAAG 901
> Ahg481853 jgi|Araly1|481853|fgenesh2_kg.4__913__AT2G29370.1
Length=819
Score = 784 bits (424), Expect = 0.0
Identities = 670/787 (85%), Gaps = 23/787 (3%)
Strand=Plus/Plus
Query 1 ATGGCTAAAG-CAGGAGAAAACTCGAGAGACAAATCTAGATGGAGCCTTGAAGGCATGAC 59
||||| |||| ||| |||| || |||||||||| |||||||||| ||||||||||||||
Sbjct 1 ATGGC-AAAGAGAGGGGAAAGCTTGAGAGACAAACCTAGATGGAGTCTTGAAGGCATGAC 59
Query 60 CGCTCTTGTTACAGGTGGCTCCAAAGGCCTCGGAGAAGCTGTAGTGGAGGAACTAGCCAT 119
||||||||||| ||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 60 TGCTCTTGTTACCGGTGGCTCCAAAGGCATCGGAGAAGCTGTGGTGGAGGAACTAGCCAT 119
Query 120 GTTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACG 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 GTTTGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACG 179
Query 180 TGAATGGCAAGCCAAAGGATTTGAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCGTGA 239
|||||||||||||||||| || | |||||||||||||| ||||| || |||||||||||
Sbjct 180 TGAATGGCAAGCCAAAGGGTTACAAGTCACCACTTCTGTTTGCGATGTTTCTTCTCGTGA 239
Query 240 GCAACGAGAGAAACTCATGGAAACCGTTTCCTCTGTCTTCCAAGGAAAACTCAACATCCT 299
|| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 240 CCAGCGAGTGAAACTCATGGAAACTGTTTCCTCTCTCTTCCAAGGAAAACTCAACATCCT 299
Query 300 CGTAAATAATGCGGGAACGGGTATAATAAAGCCGAGTACAGAGTATACAGCAGAAGA-TT 358
|||| |||| |||||||||| | ||||||||| ||||||| |||| ||||||| ||
Sbjct 300 CGTACCCAATGTGGGAACGGGTGTGGTAAAGCCGACCACAGAGTGTACATCAGAAGAGTT 359
Query 359 ACTCGTTTCTGATGGCTACAAATCTCGAGTCCGCTTTTCATCTCTCACAGA-TCGCGCAC 417
||| ||| | |||||||||||||| ||||| |||| |||||||| || | ||||||||
Sbjct 360 -CTCTTTTATAATGGCTACAAATCTGGAGTCAACTTTCCATCTCTCGCA-ACTCGCGCAC 417
Query 418 CCTTTGTTGAAAGCCTCTGGTTCCGGGAGCATCGTGTTCATGTCCTCTGTTGCTGGACTT 477
||||| ||||||||||||||||| |||| ||| ||| ||||||| || | |||||| ||
Sbjct 418 CCTTTATTGAAAGCCTCTGGTTCAGGGAACATTGTGCTCATGTCTTCCGCTGCTGGGGTT 477
Query 478 GTGCATACCGGTG---CATCAATCTATGGAGCATCTAAAGGAGCTATGAATCAGCTAG-G 533
|| || ||| ||||||||||||||||| | |||||||| ||||||||||| | |
Sbjct 478 GTAAATTTGGGTAATACATCAATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGCG 537
Query 534 AAGAAGCTTAGCATGCGAGTGGGCAAGTGACAACATAAGGGTTAACTCTGTGTGTCCATG 593
| ||| || |||||||||||||| ||||| |||||||||| ||||||||| ||||||||
Sbjct 538 A-GAAATTTGGCATGCGAGTGGGCGAGTGATAACATAAGGGCTAACTCTGTTTGTCCATG 596
Query 594 GGTCATAACAACTCCTTTAACTA--GCTTTATTTTCAGTGATGAAA-A-GTTAA-GAAAA 648
| |||| |||||||| | || || | ||| | || ||||| ||| | || || |||||
Sbjct 597 GTTCATCACAACTCCATCAAGTAAAGATTT-TCTTG-GTGAT-AAAGATGTAAAAGAAAA 653
Query 649 GCAGTGGAG-GATAAGACACCAATGGGACGTGTTGGAGAAGCAAATGAAGTATCATCGCT 707
| |||||| | | |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct 654 G--GTGGAGAG-TGTGACACCGATGGGGCGCGTTGGAGAGGCAAATGAAGTATCATCGCT 710
Query 708 TGTCGCATTTCTCTGTTTTCCGGCAGCTTCTTATATTACAGGTCAGACTATCTGCGTCGA 767
||| |||||||| ||| |||| ||||||||||||||||| ||||| || || ||||| ||
Sbjct 711 TGTGGCATTTCTATGTCTTCCTGCAGCTTCTTATATTACTGGTCAAACCATTTGCGTTGA 770
Query 768 CGGAGGT 774
||||||
Sbjct 771 TGGAGGT 777
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 29812121094
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5