BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G29220.1 Length=1884 Score E Sequences producing significant alignments: (Bits) Value Ahg320698 jgi|Araly1|320698|fgenesh1_pm.C_scaffold_4000755 2612 0.0 Ahg952007 jgi|Araly1|952007|scaffold_29500001.1 2383 0.0 Ahg933399 jgi|Araly1|933399|scaffold_401387.1 1864 0.0 > Ahg320698 jgi|Araly1|320698|fgenesh1_pm.C_scaffold_4000755 Length=1887 Score = 2612 bits (1414), Expect = 0.0 Identities = 1742/1899 (92%), Gaps = 27/1899 (1%) Strand=Plus/Plus Query 1 ATGATTACCTTCAAATCTATAGCTCTAACGATAATCTTCCTATCATATTTTGTTTCTTGT 60 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGATTACCTCCAAATCTATAGCTCTAACAATAATCTTCCTATCATATTTTGTTTCTTGT 60 Query 61 GTCTCAAGTCAACGAGAGACCAAGTTTCTTAACCATGGCTTCCTCGGGGCTAATCTCCTC 120 ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 61 GTCTCAAGTCAACGAGAAACCAAGTTTCTTAACCATGGCTTTCTCGGAGCTAATCTCCTC 120 Query 121 AACTTCGGCTCCTCCAAGG-TCTACCCAAGTGGCCTCTTGGAGTTGACAAACACTTCGAT 179 ||||| ||||| ||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 121 AACTTAGGCTCTTCCAAGGTTC-ACCCAAGTGGCCTCTTGGAGTTGACAAACACTTCGAT 179 Query 180 GAGGCAGATAGGTCAAGCTTTTCATGGCTTTCCCATCCCCTTGTCAAACCCTAACTCAAC 239 |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 180 GAGGCAAATAGGTCAAGCTTTTCATGGCTTTCCCATGCCCTTGTCAAACCCTAACTCCAC 239 Query 240 AAATTCGGTTTCTTTTTCCACAAGCTTCATCTTCGCCATCACTCAAGGAACCGGCGCACC 299 |||||| ||||||| |||||||||||| |||| |||||||||||||||||||||||||| Sbjct 240 AAATTCTCTTTCTTTCTCCACAAGCTTCGTCTTTGCCATCACTCAAGGAACCGGCGCACC 299 Query 300 AGGCCATGGCCTAGCTTTCGTCATTTCACCCTCGATGGACTTCAGTGGTGCTTTTCCCAG 359 |||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct 300 AGGCCACGGCTTAGCTTTCGTCATTTCACCAACGATGGACTTCAGTGGGGCTTTTCCCAG 359 Query 360 CAATTATCTGGGCCTCTTCAACACCTCCAACAATGGAAACTCCTTGAATCGAATTCTTGC 419 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 360 CAATTATCTCGGCCTCTTCAACACCTCCAACAATGGAAACTCCTTGAATCGCATTCTTGC 419 Query 420 AATTGAATTTGACACCGTGCAAGCGGTTGAGTTGAATGATATTGACGATAACCACGTAGG 479 | |||||||||||||||||||||||||||||||||||||||| || ||||| || || || Sbjct 420 AGTTGAATTTGACACCGTGCAAGCGGTTGAGTTGAATGATATCGATGATAATCATGTTGG 479 Query 480 CATCGACCTAAATGGAGTGATCTCCATTGCGTCTGCACCGGCTGCATATTTTGATGACCG 539 ||||| |||| |||||| ||||||||| ||||||||||||||||||||||||||| || Sbjct 480 TATCGATTTAAACGGAGTGGTCTCCATTGAGTCTGCACCGGCTGCATATTTTGATGATCG 539 Query 540 AGAGGCCAAGAACATAAGCTTGAGGCTGGCGAGTGGGAAA-CCAGTAAGAGTCTGGATCG 598 |||||||||||||| ||||||||||||||||||||||||| ||| | ||||||||||| | Sbjct 540 AGAGGCCAAGAACAGAAGCTTGAGGCTGGCGAGTGGGAAACCCA-TTAGAGTCTGGATTG 598 Query 599 AATACAACGCCACTGAGACAATGCTTAATGTCACATTGGCTCCTCTAGATCGTCCGAAGC 658 |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct 599 AATACAACGCAACTGAGATAATGCTCAATGTCACATTGGCTCCTCTAGATCGTCCGAAGC 658 Query 659 CAAGTATACCTCTTCTCTCGAGAAAAATGAATCTTTCAGGGATTTTCTCCCAAGAACATC 718 |||||||||||||||||||||||||| |||||||||| |||||||| || |||||||||| Sbjct 659 CAAGTATACCTCTTCTCTCGAGAAAACTGAATCTTTCTGGGATTTTATCTCAAGAACATC 718 Query 719 ACGTTGGATTCTCTGCGTCCACGGGGACTGTAGCGAGCTCACATTTTGTTCTAGGTTGGA 778 ||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||| Sbjct 719 ACGTTGGATTCTCTGCGGCCACGGGAACGGTAGCGAGCTCACATTTGGTTCTAGGTTGGA 778 Query 779 GCTTCAACATCGAAGGGAAAGAATCAGACTTTGATATCACGAAGCTTCCTTCTCTCCCAG 838 |||| |||||||| ||||||||||||||||| |||||||||||||||||||| || |||| Sbjct 779 GCTTTAACATCGAGGGGAAAGAATCAGACTTCGATATCACGAAGCTTCCTTCACTTCCAG 838 Query 839 ATCCGCCACCAACATTGTCTCCATCCCCAAGTCCTCCGGTTTCAACCGAGAAGAAGTCGA 898 | |||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct 839 ACCCGCCACCAACATTGTCTCCATCCCCAAGTCCTCCGGTTTCAGCCAATAAGAAGTCGA 898 Query 899 ACAACACGATGCTGATCATAATCGTCGCTGCATCAGCAACGGTTGCACTCATGATCCTAA 958 |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 899 GCAACACGATGCTGATCATAATCGTGGCTGCATCAGCAACGGTTGCAATCATGATCCTAA 958 Query 959 TCTTCTCAGGATTTTGGTTCTTACGTAGAGACAAAATATTCTTCATCGGAGGTGCAAGGA 1018 |||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||| Sbjct 959 TCTTCTTAGCATTTTGGTTCTTCCGTAGAGACAAAATATTCTTCACCGGAGGTGCAAGGA 1018 Query 1019 AATTCTCCTACCAGACGATATCGAACGCAACGGGAGG---TTTCGACAATTCTAAACTCT 1075 |||| |||||||| || || || | |||||||||||| ||| ||||| |||||||||| Sbjct 1019 AATTTTCCTACCAAACAATTTCCAGCGCAACGGGAGGAGGTTTTGACAACTCTAAACTCT 1078 Query 1076 TGGGAGAGAGAAACTCTGGAAGTTTCTACAAAGGACAGCTT-GCTCCCACAGAGATAATT 1134 ||||||||||||||||||| |||||||||||||| |||||| | |||||||||||||||| Sbjct 1079 TGGGAGAGAGAAACTCTGGGAGTTTCTACAAAGGGCAGCTTAG-TCCCACAGAGATAATT 1137 Query 1135 GCCGTAAAGAAGA-TTACTTGCACCACAAGGCAACAAAAGACAACCCTAATAGCCGAGAT 1193 |||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1138 GCCGTAAAGA-GAATTACTTGCGCCACAAGGCAACAAAAGACAACCCTAATAACCGAGAT 1196 Query 1194 CGATGCGATCTCCAAGATTAAACAACGAAACCTAGTCAATCTACATGGTTACTGCAGCAA 1253 |||||| || |||||| | |||||| |||| || || |||| |||||||| |||||||| Sbjct 1197 CGATGCAATTTCCAAGGTAAAACAAAGAAATCTTGTTGATCTGCATGGTTATTGCAGCAA 1256 Query 1254 AGGAAAAGATATCTATCTTGTTTACGAGTATGTCCCCAATGGAAGCCTAGACCGGTTCTT 1313 |||||| || |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 1257 AGGAAACGAGATCTATCTAGTTTACGAGTATGTCCCCAACGGAAGCCTAGACCGGTTCTT 1316 Query 1314 GTTCAACAACGACCGACCAGTTCTCACCTGGTCAGATCGGTTCTGTATAATAAAGGGGAT 1373 ||||| ||||||||| || ||||||||||||||||| ||||||||||| |||||||| || Sbjct 1317 GTTCAGCAACGACCGCCCTGTTCTCACCTGGTCAGACCGGTTCTGTATCATAAAGGGCAT 1376 Query 1374 TGCAG-CAGCACTTCAACACCTTCACGGTGAAGGTCAAAAACCT-TTGATTCATGGAAAC 1431 ||| | ||||||||||||||||||||||||| || ||||||||| || ||||| |||||| Sbjct 1377 TGC-GTCAGCACTTCAACACCTTCACGGTGAGGGACAAAAACCTCTT-ATTCACGGAAAC 1434 Query 1432 GTAAAAGCAAGCAACGTACTCTTAGACGAAGAGCTAAACGCTCGACTAGGCGACTATGGA 1491 || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1435 GTCAAAGCCAGCAACGTACTCTTAGACGAAGAGCTAAACGCTCGACTAGGAGACTATGGG 1494 Query 1492 CAAGGAAGCAGACACAGCACCACAGGG-CACGTTGCACCAGAACTAGTCAACACGGGAAA 1550 || |||||||||||||||||||| ||| || || |||||||||||||||||||||||||| Sbjct 1495 CATGGAAGCAGACACAGCACCAC-GGGACATGTGGCACCAGAACTAGTCAACACGGGAAA 1553 Query 1551 GG-TAACACGTGACACAGATGTGTTTGCGTTTGGAGTGTTGATGATGGAGATCGTTTGTG 1609 || || |||||||||||||||| |||| |||||||||||| ||||||||||| ||||||| Sbjct 1554 GGCTA-CACGTGACACAGATGTTTTTGAGTTTGGAGTGTTAATGATGGAGATTGTTTGTG 1612 Query 1610 GAAGGAAGGCCATAGAGCCGACTAAAGC-ACCAGAAGAGATAAGTTTGGTGAACTGGGTG 1668 |||| || || ||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct 1613 GAAGAAAAGCTATAGAGCCGAC-AAAGCCACCAGCAGAGATAAGTTTGGTGAACTGGGTG 1671 Query 1669 CTTCAAGGGTTCAAGAAAGGTGA-TCTGTTA-ATGAGCTGCGACACAAGAATCAATAGAG 1726 ||||||| |||||||||||| || | ||||| | || ||||||||||||| ||||||||| Sbjct 1672 CTTCAAGAGTTCAAGAAAGG-GAATTTGTTACA-GATCTGCGACACAAGAGTCAATAGAG 1729 Query 1727 AGAATTTGGTAGCTCGAGAAGTATTATTGGTTCTGAAAACAGGACTTCTCTGCGCCAACC 1786 |||||||||||||||||||||| || |||||||| ||||| |||||||||||||| |||| Sbjct 1730 AGAATTTGGTAGCTCGAGAAGTGTTGTTGGTTCTCAAAACTGGACTTCTCTGCGCGAACC 1789 Query 1787 GATCTCCAGAATCAAGGCCAATGATGAAA-AATGTGTTTCGGTATCTCGAAGGAACTGAA 1845 |||||||||||||||||||||||||||| || |||||||||| |||||| ||||| ||| Sbjct 1790 GATCTCCAGAATCAAGGCCAATGATGAAGCAA-GTGTTTCGGTTTCTCGATGGAACAGAA 1848 Query 1846 GCTCTCCCTCATGATGACTACCTCTTCTATGGAGTCTAA 1884 |||||||||||||||||||||||||||||||||||||| Sbjct 1849 CCTCTCCCTCATGATGACTACCTCTTCTATGGAGTCTAA 1887 > Ahg952007 jgi|Araly1|952007|scaffold_29500001.1 Length=1930 Score = 2383 bits (1290), Expect = 0.0 Identities = 1706/1904 (90%), Gaps = 40/1904 (2%) Strand=Plus/Plus Query 1 ATGATTACCTTCAAATCTATAGCTCTAACGATAATCTTCCTATCATATTTTGTTTCTTGT 60 |||||||||| ||||||||||||||||| ||||||||| ||| |||| | ||||||||| Sbjct 25 ATGATTACCTCCAAATCTATAGCTCTAATAATAATCTTCTTATTATATCTAGTTTCTTGT 84 Query 61 GTCTCAAGTCAACGAGAGACCAAGTTTCTTAACCATGGCTTCCTCGGGGCTAATCTCCTC 120 || |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 85 GTTTCAAGTCAACGAGAAATTAAGTTTCTTAACCATGGCTTCCTCGGGGCTAATCTCCTC 144 Query 121 AACTTCGGCTCCTCCAAGG-TCTACCCAAGTGGCCTCTTGGAGTTGACAAACACTTCGAT 179 || |||||||||||||||| || ||||||||||||||||||| ||||| |||||||| || Sbjct 145 AAGTTCGGCTCCTCCAAGGTTC-ACCCAAGTGGCCTCTTGGAATTGACGAACACTTCCAT 203 Query 180 GAGGCAGATAGGTCAAGCTTTTCATGGCTTTCCCATCCCCTTGTCAAACCCTAACTCAAC 239 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 204 GAGGCAGATAGGTCAAGCTTTTCATGGCTTTCCCATACCCTTGTCAAACCCTAACTCCAC 263 Query 240 AAATTCGGTTTCTTTTTCCACAAGCTTCATCTTCGCCATCACTCAAGGAACCGGCGCACC 299 |||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||| Sbjct 264 AAATTCTGTTTCTTTCTCCACAAGCTTCGTCTTCGCCATCACTCAAGGACCCGGCGCACC 323 Query 300 AGGCCATGGCCTAGCTTTCGTCATTTCACCCTCGATGGACTTCAGTGGTGCTTTTCCCAG 359 |||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 324 AGGCCACGGCTTAGCTTTCGTCATTTCACCCTCGATGGACTTCAGTGGGGCTTTTCCCAG 383 Query 360 CAATTATCTGGGCCTCTTCAACACCTCCAACAATGGAAACTCCTTGAATCGAATTCTTGC 419 ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 384 CAATTATCTCGGCCTCTTCAACACCTCCAACAATGGAATCTCCTTGAATCGCATTCTTGC 443 Query 420 AATTGAATTTGACACCGTGCAAGCGGTTGAGTTGAATGATATTGACGATAACCACGTAGG 479 | ||||||||||||||||||| || |||||||| || |||||||| ||||| || || || Sbjct 444 AGTTGAATTTGACACCGTGCAGGCCGTTGAGTTAAACGATATTGATGATAATCATGTTGG 503 Query 480 CATCGACCTAAATGGAGTGATCTCCATTGCGTCTGCACCGGCTGCATATTTTGATGACCG 539 ||||| ||||| ||||||| |||||||| ||| ||||| || ||||||||||||||||| Sbjct 504 TATCGATCTAAACGGAGTGACCTCCATTGAGTCCGCACCAGCGGCATATTTTGATGACCG 563 Query 540 AGAGGCCAAGAACATAAGCTTGAGGCTGGCGAGTGGGAAACCAGTAAGAGTCTGGATCGA 599 ||||||||||||||||||||||||||||||||||||||||| | | ||||||||||| || Sbjct 564 AGAGGCCAAGAACATAAGCTTGAGGCTGGCGAGTGGGAAACGAATTAGAGTCTGGATTGA 623 Query 600 ATACAACGCCACTGAGACAATGCTTAATGTCACATTGGCTCCTCTAGATCGTCC-GAAGC 658 ||||||||| ||||||| ||||| |||||||| |||||||||||||||| ||| ||||| Sbjct 624 ATACAACGCAACTGAGATGATGCTCAATGTCACGTTGGCTCCTCTAGATC-TCCCGAAGC 682 Query 659 CAAGTATACCTCTTCTCTCGAGAAAAATGAATCTTTCAGGGATTTTCTCCCAAGAACATC 718 |||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct 683 CAAGTATACCTCTTCTCTCGAGAAAACTGAATCTTTCTGGGATTTTATCCCAAGAACATC 742 Query 719 ACGTTGGATTCTCTGCGTCCACGGGGACTGTAGCGAGCTCACATTTTGTTCTAGGTTGGA 778 | ||||||||||||||| ||||||| |||||||| ||||||||||| ||||||||||||| Sbjct 743 ATGTTGGATTCTCTGCGGCCACGGGAACTGTAGCTAGCTCACATTTGGTTCTAGGTTGGA 802 Query 779 GCTTCAACATCGAAGGGAAAGAATCAGACTTTGATATCACGAAGCTTCCTTCTCTCCCAG 838 |||| |||||||| || | || |||||| |||||||||||||||||||||||||| |||| Sbjct 803 GCTTTAACATCGATGGCACAGCATCAGAATTTGATATCACGAAGCTTCCTTCTCTTCCAG 862 Query 839 ATCC-GCCACCAAC-ATTGTCTCCATCCCCAAGTCCTCCGGTTTCAACCGAGAAGAAG-T 895 ||| ||| || | ||||||||| ||||||||||||||||||||| | | || ||| | Sbjct 863 -TCCCGCCGCCT-CTATTGTCTCCGTCCCCAAGTCCTCCGGTTTCAGTCAA-AA-AAGAT 918 Query 896 -CGAACAACACGATGCTGATCATAATC-GTCGCTGCATCAGCAACGGTTGCACTCATGAT 953 ||||||||| || |||||| || ||| | |||| |||||| |||| ||| | || |||| Sbjct 919 TCGAACAACATGAAGCTGATTATTATCTG-CGCTACATCAGGAACGTTTGTAATCGTGAT 977 Query 954 CCTAAT-CTTCTCAGGATTTTGGTTCTTACGTAGAGA-CAAAATATTCTTCATC-GGAGG 1010 | | || || || ||| |||||| | || |||||| | |||| |||||| | | ||||| Sbjct 978 CTTGATTCT-CTTAGGGTTTTGGGTATTCCGTAGAAAGCAAAC-ATTCTTTA-CAGGAGG 1034 Query 1011 TGCAAGGAAATTCTCCTACCAGACGATATCGAACGCAACGGGAGGTTTCGACAATTCTAA 1070 |||||||||||||||| |||||| ||||||| |||||| |||||||| ||||| ||||| Sbjct 1035 TGCAAGGAAATTCTCCCACCAGAAAATATCGAGCGCAACAGGAGGTTTTGACAACTCTAA 1094 Query 1071 ACTCTTGGGAGAGAGAAACTCTGGAAGTTTCTACAAAGGACAGCTT-GCTCCCACAGAGA 1129 |||||||||||||||||||||||| |||||||||||||| |||||| | ||||||||||| Sbjct 1095 ACTCTTGGGAGAGAGAAACTCTGGGAGTTTCTACAAAGGGCAGCTTAG-TCCCACAGAGA 1153 Query 1130 TAATTGCCGTAAAGAAGA-TTACTTGCACCACAAGGCAACAAAAGACAACCCTAATAGCC 1188 ||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| || Sbjct 1154 TAATTGCCGTAAAGA-GAATTACTTGCGCCACAAGGCAACAAAAGACAACCCTAATAACC 1212 Query 1189 GAGATCGATGCGATCTCCAAGATTAAACAACGAAACCTAGTCAATCTACATGGTTACTGC 1248 ||||||||||| || |||||| | |||||| |||| || || |||| |||||||| ||| Sbjct 1213 GAGATCGATGCAATTTCCAAGGTAAAACAAAGAAATCTTGTTGATCTGCATGGTTATTGC 1272 Query 1249 AGCAAAGGAAAAGATATCTATCTTGTTTACGAGTATGTCCCCAATGGAAGCCTAGACCGG 1308 ||||||||||| || |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 1273 AGCAAAGGAAACGAGATCTATCTAGTTTACGAGTATGTCCCCAACGGAAGCCTAGACCGG 1332 Query 1309 TTCTTGTTCAACAACGACCGACCAGTTCTCACCTGGTCAGATCGGTTCTGTATAATAAAG 1368 |||||||||| ||||||||| || ||||||||||||||||| ||||||||||| |||||| Sbjct 1333 TTCTTGTTCAGCAACGACCGCCCTGTTCTCACCTGGTCAGACCGGTTCTGTATCATAAAG 1392 Query 1369 GGGATTGCAG-CAGCACTTCAACACCTTCACGGTGAAGGTCAAAAACCT-TTGATTCATG 1426 || ||||| | ||||||||||||||||||||||||| || ||||||||| || ||||| | Sbjct 1393 GGCATTGC-GTCAGCACTTCAACACCTTCACGGTGAGGGACAAAAACCTCTT-ATTCACG 1450 Query 1427 GAAACGTAAAAGCAAGCAACGTACTCTTAGACGAAGAGCTAAACGCTCGACTAGGCGACT 1486 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1451 GAAACGTCAAAGCCAGCAACGTACTCTTAGACGAAGAGCTAAACGCTCGACTAGGAGACT 1510 Query 1487 ATGGACAAGGAAGCAGACACAGCACCACAGGG-CACGTTGCACCAGAACTAGTCAACACG 1545 |||| || |||||||||||||||||||| ||| || || ||||||||||||||||||||| Sbjct 1511 ATGGGCATGGAAGCAGACACAGCACCAC-GGGACATGTGGCACCAGAACTAGTCAACACG 1569 Query 1546 GGAAAGG-TAACACGTGACACAGATGTGTTTGCGTTTGGAGTGTTGATGATGGAGATCGT 1604 ||||||| || |||||||||||||||| |||| |||||||||||| ||||||||||| || Sbjct 1570 GGAAAGGCTA-CACGTGACACAGATGTTTTTGAGTTTGGAGTGTTAATGATGGAGATTGT 1628 Query 1605 TTGTGGAAGGAAGGCCATAGAGCCGACTAAAGC-ACCAGAAGAGATAAGTTTGGTGAACT 1663 ||||||||| || || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct 1629 TTGTGGAAGAAAAGCTATAGAGCCGAC-AAAGCCACCAGCAGAGATAAGTTTGGTGAACT 1687 Query 1664 GGGTGCTTCAAGGGTTCAAGAAAGGTGA-TCTGTTA-ATGAGCTGCGACACAAGAATCAA 1721 |||||||||||| |||||||||||| || | ||||| | || ||||||||||||| |||| Sbjct 1688 GGGTGCTTCAAGAGTTCAAGAAAGG-GAATTTGTTACA-GATCTGCGACACAAGAGTCAA 1745 Query 1722 TAGAGAGAATTTGGTAGCTCGAGAAGTATTATTGGTTCTGAAAACAGGACTTCTCTGCGC 1781 ||||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||| Sbjct 1746 TAGAGAGAATTTGGTAGCTCGAGAAGTGTTGTTGGTTCTCAAAACTGGACTTCTCTGCGC 1805 Query 1782 CAACCGATCTCCAGAATCAAGGCCAATGATGAAA-AATGTGTTTCGGTATCTCGAAGGAA 1840 |||||||||||||||||||||||||||||||| || |||||||||| |||||| |||| Sbjct 1806 GAACCGATCTCCAGAATCAAGGCCAATGATGAAGCAA-GTGTTTCGGTTTCTCGATGGAA 1864 Query 1841 CTGAAGCTCTCCCTCATGATGACTACCTCTTCTATGGAGTCTAA 1884 | ||| |||||||||||||||||||||||||||||||||||||| Sbjct 1865 CAGAACCTCTCCCTCATGATGACTACCTCTTCTATGGAGTCTAA 1908 > Ahg933399 jgi|Araly1|933399|scaffold_401387.1 Length=1915 Score = 1864 bits (1009), Expect = 0.0 Identities = 1618/1904 (85%), Gaps = 73/1904 (4%) Strand=Plus/Plus Query 6 TACCTTC-AAATCTATAGCTCTAACGATAATCTTCCTATCATATTTTGTTTCTTGTGTCT 64 |||| || ||||| ||||||||| | ||||||||||||| || | |||||||||||| Sbjct 29 TACC-TCTAAATCGATAGCTCTATCAATAATCTTCCTATTATCCTCAATTTCTTGTGTCT 87 Query 65 CAAGTCAACGA-GAGACCAAGTTTCTTAACCATGGCTTCCTCGGGGCTAATCTCCTCAAC 123 |||||||| | || | ||| ||||||||||||||||| ||||| |||||||||||| || Sbjct 88 TAAGTCAAC-AGGAAAACAAATTTCTTAACCATGGCTTTCTCGGAGCTAATCTCCTC-AC 145 Query 124 -TTCGGCTCCTCCAAGGTCTACCCA-AGTGGCCTCTTGGAGTTGACAAACACTTCGATGA 181 || |||||||| ||| || | ||| ||||||||||||||||||||||| ||||| |||| Sbjct 146 TTTTGGCTCCTCAAAGATCCA-CCAGAGTGGCCTCTTGGAGTTGACAAATACTTCAATGA 204 Query 182 GGCAGATAGGTCAAGCTTTTCATGGCTTTCCCATCCCCTTGTCAAACCCTAACTCAACAA 241 |||| ||||||||||||||||||||||||||||| ||||| | ||||||||||| ||| Sbjct 205 GGCAAATAGGTCAAGCTTTTCATGGCTTTCCCATACCCTTCTTGAACCCTAACTCCTCAA 264 Query 242 ATTCGGTTTCTTTTTCCACAAGCTTCATCTTCGCCATCACTCAAGGAACC-GGCGCACCA 300 |||| |||||||| ||||||||||| ||||||||||||||| ||| ||| | ||||| Sbjct 265 ATTCTGTTTCTTTCTCCACAAGCTTTGTCTTCGCCATCACTCCAGG-ACCAACCACACCA 323 Query 301 GGCCATGGCCT-AGCTTTCGTCATTTCACCCTCGATGGACTTCAGTGGTGCTTTTCCCAG 359 ||||| ||| | |||||| || || || || ||||||||||| || || || |||||||| Sbjct 324 GGCCACGGCTTGAGCTTT-GTTATCTCTCCGTCGATGGACTTTAGCGGAGCCTTTCCCAG 382 Query 360 CAATTATCTGGGCCTCTTCAACACCTCCAACAATGGAAACTCCTTGAATCGAATTCTTGC 419 |||||| || ||||| |||||||| |||| |||||||||||||| || || |||||||| Sbjct 383 CAATTACCTTGGCCTTTTCAACACATCCACCAATGGAAACTCCTCAAACCGCATTCTTGC 442 Query 420 AATTGAATTTGACACCGTGCAAG-CGGTTGAGTTGAATGATATTGACGATAACCACGTAG 478 | |||| || ||||| || | || | ||||| |||| |||||||| |||||||| || | Sbjct 443 AGTTGAGTTCGACACGGTTC-AGTCCGTTGAAATGAACGATATTGATGATAACCATGTTG 501 Query 479 GCATCGACCTAAATGGAGTGATCTCCATTGCGTCTG-CACCGGCTGCATATTTTGATGAC 537 | |||||| ||||||||||||||||||||| |||| | || |||||||||||||||||| Sbjct 502 GTATCGACGTAAATGGAGTGATCTCCATTGAATCTGCCTCC-GCTGCATATTTTGATGAC 560 Query 538 CGAGAGGCCAAGAACATAAGCTTGAGGCTGGCGAGTGGGAAACC-AGTAAGAGTCTGGAT 596 |||||||| |||||||| || |||||| |||||||||||||||| | | ||||||||||| Sbjct 561 CGAGAGGCAAAGAACATTAGTTTGAGGTTGGCGAGTGGGAAACCTA-TTAGAGTCTGGAT 619 Query 597 CGAATACAACGCCACTGAGACAATGCTTAATGTCACATTGGCTCCTCTAGATCGTCCGAA 656 ||||||||| || || |||| ||||| |||||||||||||||||||||||||||||||| Sbjct 620 CGAATACAATGCGACCGAGATGATGCTCAATGTCACATTGGCTCCTCTAGATCGTCCGAA 679 Query 657 GCC-AAGTATACCTCTTCTCTCGAGAAAAATGAATCTTTCAGGGATTTTCTCCCAAGAAC 715 ||| || | | |||||||| ||||||||| | ||||| || | |||| |||| |||||| Sbjct 680 GCCAAACT-TGCCTCTTCTATCGAGAAAACTAAATCTCTCTGAGATTGTCTCTGAAGAAC 738 Query 716 ATCACGTTGGATTCTCTGC-GTCCACGGGGACTGT-AGCGAGCTCACATTTTGTTCTAGG 773 || |||||||||||||| | ||||||| ||||| | |||||||||||||||| ||||| Sbjct 739 ATTTTGTTGGATTCTCTGCAG-CCACGGGAACTGTCA-CGAGCTCACATTTTGTGCTAGG 796 Query 774 TTGGAGCTTCAACATCGAAGGGAAAGAATCAGACTTTGATATCACGAAGCTTCCTTCTCT 833 |||||||||| |||||| ||||||| ||||||||||||||| ||||||||||| ||||| Sbjct 797 CTGGAGCTTCAGCATCGAGGGGAAAGCATCAGACTTTGATATTACGAAGCTTCCCTCTCT 856 Query 834 CCCAGAT-CCGCCACCAACATTGTCTCCATCCCCAAGTCCTCCGGTTTCAACCGAGAAGA 892 |||| | || || || |||||||||| |||||||||||||||||||| | |||||| Sbjct 857 TCCAG-TCCCACCGCCTCCATTGTCTCCGTCCCCAAGTCCTCCGGTTTCGGTCAAGAAGA 915 Query 893 AGTCGAACAACACGATGCTGATCATAATCGTCGCTGCATCAGCAACGGTTGCACTCATGA 952 |||||| ||||| || ||||||||||||| | ||| || ||||||| ||| | || || Sbjct 916 AGTCGAGCAACATGAAGCTGATCATAATCATTGCTACAGCAGCAACATTTGTAATCTTGT 975 Query 953 TCCTAATCTTCTCAGGATTTTG-GTTCTTACGTAG-AGACAAAATATTCTTCATCGGAGG 1010 || | ||||||| || | |||| ||| || ||||| || ||| | ||||| |||||| Sbjct 976 TCTTGATCTTCTTAGCAGTTTGTGTT-TTTCGTAGAAG-GGAAA-A--CTTCACCGGAGG 1030 Query 1011 TGCAAGGAAATTCTC-CTACCAGACGATATCGAACGCAACGGGAGGTTTCGACAATTCTA 1069 ||| |||||||||| | |||||||||| || | ||||||||||||||||||||| |||| Sbjct 1031 CGCACGGAAATTCTCAC-ACCAGACGATTTCCAGCGCAACGGGAGGTTTCGACAACTCTA 1089 Query 1070 AACTCTTGGGAGAGAGAAACTCTGGAAGTTTCTACAAAGGACAGCTTGCTCCCACAGAGA 1129 | || |||||||||||||||||||| |||||||||||||| || |||||||||||||||| Sbjct 1090 AGCTTTTGGGAGAGAGAAACTCTGGCAGTTTCTACAAAGGGCAACTTGCTCCCACAGAGA 1149 Query 1130 TAATTGCCGTAAAGAAG-ATTACTTGCACCACAAGGCAACAAAAGACAACCCTAATAGCC 1188 |||||||||||||| || |||||||||| ||||||||| |||||||||||||||||||| Sbjct 1150 TAATTGCCGTAAAG-AGAATTACTTGCAGCACAAGGCAGCAAAAGACAACCCTAATAGCT 1208 Query 1189 GAGATCGATGCGATCTCCAAGATTAAACAACGAAACCTAGTCAATCTACATGGTTACTGC 1248 || |||||||||||||||||||| |||||| ||||||| || |||||||||||||||||| Sbjct 1209 GAAATCGATGCGATCTCCAAGATAAAACAAAGAAACCTTGTTAATCTACATGGTTACTGC 1268 Query 1249 AGCAAAGGAAAAGATATCTATCTTGTTTACGAGTATGTCCCCAATGGAAGCCTAGACCGG 1308 || |||||||| || |||||||| |||||||| ||||||||||| |||||||| |||||| Sbjct 1269 AGAAAAGGAAACGAGATCTATCTAGTTTACGAATATGTCCCCAACGGAAGCCTGGACCGG 1328 Query 1309 TTCTTGTTCAACAACGACCGACCAGTTCTCACCTGG-TCAGATC-GGTT-CTGTATAATA 1365 |||||||||||||||||||||||||||||||| ||| | ||| | |||| | |||| ||| Sbjct 1329 TTCTTGTTCAACAACGACCGACCAGTTCTCACATGGGT-AGA-CAGGTTTC-GTATTATA 1385 Query 1366 AAGGGGATTGCAG-CAGCACTTCAACACCTTCACGGTGAAGGT-CAAAAACCT-TTGATT 1422 ||||| ||||| | ||||||||||||||||||||||||| ||| ||||||||| || || Sbjct 1386 AAGGGTATTGC-GTCAGCACTTCAACACCTTCACGGTGA-GGTTCAAAAACCTCTT-ATA 1442 Query 1423 CATGGAAACGTAAAAGCAAGCAACGTACTCTTAGACGAAGAGCTAAACGCTCGACTAGGC 1482 |||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1443 CATGGAAATGTCAAAGCAAGTAACGTACTCTTGGACGAAGAGCTAAACGCTCGACTAGGA 1502 Query 1483 GACTATGGACAAGGAAGCAGACACAGCACCACAGGG-CACGTTGCACCAGAACTAGTCAA 1541 ||||||||||||||||||||||||||||| || ||| || || ||||||||||||||||| Sbjct 1503 GACTATGGACAAGGAAGCAGACACAGCACTAC-GGGACATGTGGCACCAGAACTAGTCAA 1561 Query 1542 CACGGGAAAGG-TAACACGTGACACAGATGTGTTTGCGTTTGGAGTGTTGAT-GATGGAG 1599 ||||||||||| || ||| ||| ||||||||||||| |||||||||||| || ||||||| Sbjct 1562 CACGGGAAAGGCTA-CACTTGAAACAGATGTGTTTGAGTTTGGAGTGTT-ATTGATGGAG 1619 Query 1600 ATCGTTTGTGGAAGGA-AGGCCATAGAGCCGACTAAAGCA-CCAGAAGAGATAAGTTTGG 1657 || ||||||||||||| || ||||||||||||| |||| | || | |||||| ||||| | Sbjct 1620 ATTGTTTGTGGAAGGAGAG-CCATAGAGCCGAC-AAAGGAACCGGTAGAGATCAGTTTAG 1677 Query 1658 TGAACTGGGTGCTTCAAGGGTTCAAGAAAGGTGATCTGTTAATGAGCTGCGACACAAGAA 1717 | |||||| |||||| |||| |||||| || |||| |||| ||| ||||||| ||||| Sbjct 1678 TTAACTGGATGCTTCGAGGGGTCAAGAGCGGCAATCTCTTAAGGAGATGCGACAAAAGAA 1737 Query 1718 TCAATAGAGAGAATTTGGTAGCTCG-AG-AAGTATTATTGGTTCTGAAAACAGGACTTCT 1775 |||| | | || ||||||| | ||| || |||| | ||||||| |||||||||||||||| Sbjct 1738 TCAAGAAAAAGGATTTGGT-G-TCGGAGGAAGTGTCATTGGTTTTGAAAACAGGACTTCT 1795 Query 1776 CTGCGCCA-ACCGATCTCCAGAATCAAGGCCAATGATGAA-AAATGTGTTTCG-GTATCT 1832 ||||| | || ||||||||||| | |||||||||||||| ||| ||||| | |||||| Sbjct 1796 CTGCGTGAGAC-GATCTCCAGAAGCTAGGCCAATGATGAAGAAA-GTGTTG-GAGTATCT 1852 Query 1833 CGAA-GGAACTGAA-GCTCTCCCTCATGATGACTACCTCTTCTA 1874 | || || || ||| | |||||||||||| |||||| || |||| Sbjct 1853 C-AATGGTACAGAAAG-TCTCCCTCATGACGACTACGTCGTCTA 1894 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 70771675210 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5