BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G29370.1
Length=1062
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481853 jgi|Araly1|481853|fgenesh2_kg.4__913__AT2G29370.1 1269 0.0
Ahg481835 jgi|Araly1|481835|fgenesh2_kg.4__895__AT2G29150.1 769 0.0
Ahg481852 jgi|Araly1|481852|fgenesh2_kg.4__912__AT2G29360.1 761 0.0
Ahg497196 jgi|Araly1|497196|fgenesh2_kg.41__4__AT2G29150.1 754 0.0
Ahg481850 jgi|Araly1|481850|fgenesh2_kg.4__910__AT2G29350.1 710 0.0
Ahg481843 jgi|Araly1|481843|fgenesh2_kg.4__903__AT2G29290.2 676 0.0
> Ahg481853 jgi|Araly1|481853|fgenesh2_kg.4__913__AT2G29370.1
Length=819
Score = 1269 bits (687), Expect = 0.0
Identities = 777/821 (95%), Gaps = 4/821 (0%)
Strand=Plus/Plus
Query 1 ATGGCAAAGAGAGGGGAAAGCTTGAGAGACAAACCTAAATGGAGTCTTGAAGGCATGACT 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1 ATGGCAAAGAGAGGGGAAAGCTTGAGAGACAAACCTAGATGGAGTCTTGAAGGCATGACT 60
Query 61 GCTCTTGTTACCGGTGGATCTAAAGGCCTCGGAAAAGCTGTGGTGGAGGAACTAGCCATG 120
||||||||||||||||| || |||||| ||||| ||||||||||||||||||||||||||
Sbjct 61 GCTCTTGTTACCGGTGGCTCCAAAGGCATCGGAGAAGCTGTGGTGGAGGAACTAGCCATG 120
Query 121 TTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAAAGCTTACGT 180
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 121 TTTGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACGT 180
Query 181 GAATGGCAAGCAAAAGGGTTACAAGTCACCACTTCTGTTTGCGATGTTTCTTCTCGTGAC 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GAATGGCAAGCCAAAGGGTTACAAGTCACCACTTCTGTTTGCGATGTTTCTTCTCGTGAC 240
Query 241 CAGCGAGAGAAACTCATGGAAACTGTTTCCTCTCTCTTCCAAGGAAAACTCAGCATCCTC 300
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 241 CAGCGAGTGAAACTCATGGAAACTGTTTCCTCTCTCTTCCAAGGAAAACTCAACATCCTC 300
Query 301 GTACCCAATGTGGGAATAGGTGTACTAAAGCCGACGACTGAGTGTACAGCAGAAGAGTTC 360
|||||||||||||||| ||||| |||||||||| || ||||||||| |||||||||||
Sbjct 301 GTACCCAATGTGGGAACGGGTGTGGTAAAGCCGACCACAGAGTGTACATCAGAAGAGTTC 360
Query 361 TCATTTATAATAGCTACAAATCTGGAGTCAACTTTCCATTTCTCGCAACTCGCGCATCCT 420
|| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 361 TCTTTTATAATGGCTACAAATCTGGAGTCAACTTTCCATCTCTCGCAACTCGCGCACCCT 420
Query 421 TTATTGAAAGCCTCTGGTTCAGGGAACATTGTGCTCATGTCTTCCG-TGGCTGGAGTTGT 479
|||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||
Sbjct 421 TTATTGAAAGCCTCTGGTTCAGGGAACATTGTGCTCATGTCTTCCGCT-GCTGGGGTTGT 479
Query 480 AAATTTGGGTAATACATCAATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGCGAG 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AAATTTGGGTAATACATCAATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGCGAG 539
Query 540 AAATTTAGCATGCGAGTGGGCGAGTGATAATATAAGGGCTAATTCTGTTTGTCCATGGTT 599
|||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 540 AAATTTGGCATGCGAGTGGGCGAGTGATAACATAAGGGCTAACTCTGTTTGTCCATGGTT 599
Query 600 CATTACAACTCCGTCAACTAAAGATTTCCTCGGTGATAAAGATGTAAAAGAAAAGGTGGA 659
||| |||||||| |||| ||||||||| || |||||||||||||||||||||||||||||
Sbjct 600 CATCACAACTCCATCAAGTAAAGATTTTCTTGGTGATAAAGATGTAAAAGAAAAGGTGGA 659
Query 660 GAGTGTGACACC-ATTGAGACGTGTTGGAGAGGCAAATGAAGTATCATCGCTTGTTGCAT 718
|||||||||||| || | | || |||||||||||||||||||||||||||||||| ||||
Sbjct 660 GAGTGTGACACCGATGGGG-CGCGTTGGAGAGGCAAATGAAGTATCATCGCTTGTGGCAT 718
Query 719 TTCTATGTCTTCCCGCAGCTTCTTATATAACAGGTCAAACCATTTGCGTTGATGGAGGTT 778
||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 719 TTCTATGTCTTCCTGCAGCTTCTTATATTACTGGTCAAACCATTTGCGTTGATGGAGGTT 778
Query 779 TCACTATTAACGGCTTCTCTTTGCCTTAAACACGTATATAT 819
||||||||||||| |||||||| |||||||||||||||||
Sbjct 779 TCACTATTAACGGTTTCTCTTTTTCTTAAACACGTATATAT 819
> Ahg481835 jgi|Araly1|481835|fgenesh2_kg.4__895__AT2G29150.1
Length=798
Score = 769 bits (416), Expect = 0.0
Identities = 682/809 (84%), Gaps = 24/809 (3%)
Strand=Plus/Plus
Query 1 ATGGCAAAGAGAGGGGAAAGCTTGAGAGACAAACCTAAATGGAGTCTTGAAGGCATGACT 60
||||| |||| ||| |||| ||||||||||||| ||| |||||| ||||||||||||||
Sbjct 1 ATGGCTAAGACAGGAGAAAACTTGAGAGACAAATCTAGATGGAGCCTTGAAGGCATGACC 60
Query 61 GCTCTTGTTACCGGTGGATCTAAAGGCCTCGGAAAAGCTGTGGTGGAGGAACTAGCCATG 120
||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||
Sbjct 61 GCTCTTGTTACCGGTGGCTCCAAAGGCCTCGGAGAAGCTGTAGTGGAGGAACTAGCCATG 120
Query 121 TTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAAAGCTTACGT 180
|| ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 121 TTTGGAGCAAGAGTCCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGATTACGT 180
Query 181 GAATGGCAAGCAAAAGGGTTACAAGTCACCACTTCTGTTTGCGATGTTTCTTCTCGTGAC 240
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 181 GAATGGCAAGCAAAAGGGTTTCAAGTCACCACTTCTGTCTGCGATGTTTCTTCTCGTGAC 240
Query 241 CAGCGAGAGAAACTCATGGAAACTGTTTCCTCTCTCTTCCAAGGAAAACTCAGCATCCTC 300
|| |||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||
Sbjct 241 CAACGAGAGAAACTCATGGAAACCGTTGCCTCTCTCTTCCAAGGAAAACTCAACATCCTC 300
Query 301 GTACCCAATGTGGGAATAGGTGTACTAAAGCCGACGACT-GAGTGTACAGCAGAAGAGTT 359
||| ||||| ||||| ||| ||||||||||||| | | |||| ||||| | |||| ||
Sbjct 301 GTAAACAATGCGGGAACGGGTATACTAAAGCCGACTA-TAGAGTATACAGAACAAGA-TT 358
Query 360 -CTCATTT-ATAATAGCTACAAATCTGGAGTCAACTTTCCATTTCTCGCAACTCGCGCAT 417
||| ||| | | | ||||||||||| ||||| |||| ||| | || || ||||| |||
Sbjct 359 ACTCGTTTCAGA-TGGCTACAAATCTCGAGTCCGCTTTTCATCTATCACAGCTCGCTCAT 417
Query 418 CCTTTATTGAAAGCCTCTGG-TTCAGGGAACATTGTGCTCATGTCTTCCGTGGCTGGAGT 476
|||||||| ||||| || | || ||||| ||| ||| ||||||| || || |||||| |
Sbjct 418 CCTTTATTAAAAGCTTC-GAATTTAGGGAGCATCGTGTTCATGTCCTCTGTTGCTGGACT 476
Query 477 TGTAAATTTGGGTAATACATCAATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGC 536
|||| || ||| |||| ||||||||||||||||||||||| ||||||||||| |
Sbjct 477 TGTACATACCGGTG---CATCCATCTATGGAGCAACCAAAGGAGCTATGAATCAGCTAG- 532
Query 537 GA-GAAATTTAGCATGCGAGTGGGCGAGTGATAATATAAGGGCTAATTCTGTTTGTCCAT 595
|| || | ||||||||||||||||| ||||| || ||||||| ||| || || |||||||
Sbjct 533 GAAGAGACTTAGCATGCGAGTGGGCAAGTGACAACATAAGGGTTAACTCGGTGTGTCCAT 592
Query 596 GGTTCATTACAACTCCGTCAACTAAAGATTTCCTCGGTGAT-AAAGATGTAAAAGAAAAG 654
|| |||| |||||||| | ||||| | ||| | | |||| ||| | || || ||||||
Sbjct 593 GGGTCATAACAACTCCTTTAACTA--GCTTTATTAG-TGATGAAA-A-GTTAA-GAAAAG 646
Query 655 --GTGGAG-AGTGTGACACCATTGAGACGTGTTGGAGAGGCAAATGAAGTATCATCGCTT 711
|||||| | | ||||||| || ||||||||||||| | ||||||||||||||||||
Sbjct 647 CAGTGGAGGA-TAAGACACCAATGGGACGTGTTGGAGAAGTGAATGAAGTATCATCGCTT 705
Query 712 GTTGCATTTCTATGTCTTCCCGCAGCTTCTTATATAACAGGTCAAACCATTTGCGTTGAT 771
|| |||||||| ||| |||| ||||||||||||||||| ||||| || || ||||| ||
Sbjct 706 GTCGCATTTCTTTGTTTTCCGGCAGCTTCTTATATAACTGGTCAGACTATCTGCGTCGAC 765
Query 772 GGAGGTTTCACTATTAACGGCTTCTCTTT 800
|||||| || | | ||||||||||||||
Sbjct 766 GGAGGTGTCTCGGTGAACGGCTTCTCTTT 794
> Ahg481852 jgi|Araly1|481852|fgenesh2_kg.4__912__AT2G29360.1
Length=864
Score = 761 bits (412), Expect = 0.0
Identities = 682/811 (84%), Gaps = 23/811 (3%)
Strand=Plus/Plus
Query 1 ATGGCAAAGAGAGGGGAAAGCTTGAGAGACAAACCTAAATGGAGTCTTGAAGGCATGACT 60
|||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 47 ATGGCAAAGAGA-TGGAAAGCTTGAGAGACAAACCTAGATGGAGTCTTGTAGGCATGACC 105
Query 61 GCTCTTGTTACCGGTGGATCTAAAGGCCTCGGAAAAGCTGTGGTGGAGGAACTAGCCATG 120
||||||||||||||||| || |||||| ||||| |||||||||||||||||||||| |||
Sbjct 106 GCTCTTGTTACCGGTGGCTCCAAAGGCATCGGAGAAGCTGTGGTGGAGGAACTAGCTATG 165
Query 121 TTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAAAGCTTACGT 180
|| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 166 TTAGGAGCAAGAGTCCACACATGTGCCAGAGACGAAACTAAGCTTCAAGAAAGCTTACGT 225
Query 181 GAA-TGGCAAGCAAAAGGGTTACAAGTCACCACTTCTGTTTGCGATGTTTCTTCTCGTGA 239
|| ||||||||||||||||| || || ||||||||||||| ||| ||||||||||||
Sbjct 226 -AACTGGCAAGCAAAAGGGTTTCAGGTTACCACTTCTGTTTCCGACATTTCTTCTCGTGG 284
Query 240 CCAGCGAGAGAAACTCATGGAAACTGTTTCCTCTCTCTTCCAAGGAAAACTCAGCATCCT 299
||| ||||||||||| ||||||||||||||| | |||| |||||||||||| || ||
Sbjct 285 CCAACGAGAGAAACTTATGGAAACTGTTTCCACGATCTTTGAAGGAAAACTCAATATACT 344
Query 300 CGTACCCAATGTGGGAATAG-GTGTA-CTAAAGCCGACGAC-T-GAGTGTACAGCAGAAG 355
||| ||||||||||| | || || | ||| ||||| | | | |||||| ||||
Sbjct 345 TGTAAACAATGTGGGAA-CGTGTATAGCCAAA-CCGAC--CTTAAAACATACAGCGGAAG 400
Query 356 AGTTCTCATTTATAATAGCTACAAATCTGGAGTCAACTTTCCATTTCTCGCAACTCGCGC 415
| |||||||||| || ||||||||||| ||||||||||| ||| |||| || |||||||
Sbjct 401 ATTTCTCATTTACGATGGCTACAAATCTCGAGTCAACTTTTCATCTCTCACAGCTCGCGC 460
Query 416 ATCCTTTATTGAAAGCCTCTGGTTCAGGGAACATTGTGCTCATGTCTTCCGTGGCTGGAG 475
| ||||| |||||||||||||||||||||| ||| ||||| || || ||||| ||||||
Sbjct 461 ACCCTTTGTTGAAAGCCTCTGGTTCAGGGAGCATCGTGCTAATCTCCTCCGTATCTGGAG 520
Query 476 TTGTAAATTTGGGTAATACATCAATCTATGGAGCAACCAAAGGAGCCATGAATCAGCT-G 534
||||| || | | | |||| |||||||||| | | |||||||| ||||||||||| |
Sbjct 521 TTGTACATGTCAATGGTGCATCCATCTATGGAGTATCTAAAGGAGCTATGAATCAGCTAG 580
Query 535 GCGAGAAATTTAGCATGCGAGTGGGCGAGTGATAATATAAGGGCTAATTCTGTTTGTCCA 594
| ||||| ||||||||||||||||| ||||| || || ||| |||| ||||| ||||||
Sbjct 581 G-AAGAAACTTAGCATGCGAGTGGGCAAGTGACAACATTAGGACTAACTCTGTGTGTCCA 639
Query 595 TGGTTCATTA-CAACTCCGTCAACTAAAG-ATTTCCTCGGTGATAAAGATGTAAAAGAAA 652
||||||| || |||||| | | || | | || || || || |||| || |||||
Sbjct 640 TGGTTCA-TAGAAACTCCTTTAGTTACCGAAGTT-CTTAGTAATGAAGA-GT-TTAGAAA 695
Query 653 AG--GTGGAGAGT-GTGACACCATTGAGACGTGTTGGAGAGGCAAATGAAGTATCATCGC 709
|| ||||||||| | | ||||| || ||||||||||||| | |||||||| |||||||
Sbjct 696 AGAAGTGGAGAGTAG-GCCACCAATGGGACGTGTTGGAGAAGTGAATGAAGTCTCATCGC 754
Query 710 TTGTTGCATTTCTATGTCTTCCCGCAGCTTCTTATATAACAGGTCAAACCATTTGCGTTG 769
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 755 TTGTTGCATTTCTCTGTCTTCCTGCAGCTTCTTATATAACAGGTCAAACCATTTGCGTTG 814
Query 770 ATGGAGGTTTCACTATTAACGGCTTCTCTTT 800
|||||||||||||| |||| || ||||||||
Sbjct 815 ATGGAGGTTTCACTGTTAATGGTTTCTCTTT 845
> Ahg497196 jgi|Araly1|497196|fgenesh2_kg.41__4__AT2G29150.1
Length=804
Score = 754 bits (408), Expect = 0.0
Identities = 679/809 (84%), Gaps = 21/809 (3%)
Strand=Plus/Plus
Query 1 ATGGCAAAGAGAGGGGAAAGCTTGAGAGACAAACCTAAATGGAGTCTTGAAGGCATGACT 60
||||| |||| ||| |||| ||||| ||||||| ||| |||||| |||| |||||||||
Sbjct 1 ATGGCTAAGACAGGAGAAAACTTGACAGACAAATCTAGATGGAGCCTTGGAGGCATGACC 60
Query 61 GCTCTTGTTACCGGTGGATCTAAAGGCCTCGGAAAAGCTGTGGTGGAGGAACTAGCCATG 120
|||||||| |||||||| || |||||||||||| ||||||||||||||||||||||||||
Sbjct 61 GCTCTTGTGACCGGTGGCTCCAAAGGCCTCGGAGAAGCTGTGGTGGAGGAACTAGCCATG 120
Query 121 TTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAAAGCTTACGT 180
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 121 TTGGGAGCAAGAGTCCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTTACGT 180
Query 181 GAATGGCAAGCAAAAGGGTTACAAGTCACCACTTCTGTTTGCGATGTTTCTTCTCGTGAC 240
|| ||||||| ||||||||| || |||||||||||||| ||||| |||||||||||||||
Sbjct 181 GAGTGGCAAGGAAAAGGGTTTCAGGTCACCACTTCTGTATGCGACGTTTCTTCTCGTGAC 240
Query 241 CAGCGAGAGAAACTCATGGAAACTGTTTCCTCTCTCTTCCAAGGAAAACTCAGCATCCTC 300
|| |||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||
Sbjct 241 CAACGAGAGAAACTCATGGAAACCGTTTCCTCTATCTTCCAAGGAAAACTCAACATCCTC 300
Query 301 GTACCCAATGTGGGAATAGGTGTA-CTAAAGCCGACGACTGAGTGTACAGCAGAAGAGTT 359
||| |||| ||||| ||| || | ||||||||| ||||||| ||||||| |||| ||
Sbjct 301 GTAAGTAATGCGGGAACCGGTATAGC-AAAGCCGACTACTGAGTTTACAGCACAAGA-TT 358
Query 360 -CTCATTTATAATAGCTACAAATCTGGAGTCAACTTTCCATTTCTCGCAACTCGCGCATC 418
||| ||| | || ||||||||||| |||||| |||| ||| |||| || || || ||||
Sbjct 359 ACTCGTTTCTGATGGCTACAAATCTCGAGTCAGCTTTTCATATCTCACAGCTTGCTCATC 418
Query 419 CTTTATTGAAAGCCTCTGGTTCAGGGAACATTGTGCTCATGTCTTCCGTGGCTGGAGTTG 478
||||||| ||||| || ||| ||||| ||| ||| ||||||| || || |||||| |||
Sbjct 419 CTTTATTAAAAGCTTCAAGTTTAGGGAGCATCGTGTTCATGTCCTCTGTTGCTGGACTTG 478
Query 479 TAAATT-TGGGTAATACATCAATCTATGGAGCAACCAAAGGAGCCATGAATCAGCTGGCG 537
| || ||| | |||| |||||||||||||| |||||||| ||||||||||| | |
Sbjct 479 TGCATACTGG-TG---CATCCATCTATGGAGCAACAAAAGGAGCTATGAATCAGCTAG-G 533
Query 538 A-GAAATTTAGCATGCGAGTGGGCGAGTGATAATATAAGGGCTAATTCTGTTTGTCCATG 596
| |||| ||||||||||||||||| ||||| || ||||||| ||| ||||| ||||||||
Sbjct 534 AAGAAACTTAGCATGCGAGTGGGCAAGTGACAACATAAGGGTTAACTCTGTGTGTCCATG 593
Query 597 GTTCATTA-CAACTCCGTCAACTAA-AG-ATTTCCTCGGTGATAAAGA-TGTAAAAGAAA 652
| |||| | ||||||| | | | | | |||| || ||||| |||| | ||||| ||
Sbjct 594 GGTCAT-AGCAACTCCTTTAGCCAGCATTATTT--TCAGTGATGAAGAGTTTAAAA-AAG 649
Query 653 -AGGTGGAGAGTGTGACACCATTGAGACGTGTTGGAGAGGCAAATGAAGTATCATCGCTT 711
|| |||||||| ||||||| || ||||||||||| | ||||||||||| |||||||||
Sbjct 650 CAG-TGGAGAGTAAGACACCAATGGGACGTGTTGGAAAAGCAAATGAAGTCTCATCGCTT 708
Query 712 GTTGCATTTCTATGTCTTCCCGCAGCTTCTTATATAACAGGTCAAACCATTTGCGTTGAT 771
|| |||||||| ||| |||| ||||||||||||||||| ||||| || || || || |||
Sbjct 709 GTCGCATTTCTCTGTTTTCCGGCAGCTTCTTATATAACGGGTCAGACTATCTGTGTCGAT 768
Query 772 GGAGGTTTCACTATTAACGGCTTCTCTTT 800
|||||| | | | ||||||||||||||
Sbjct 769 GGAGGTGCCTCGGTGAACGGCTTCTCTTT 797
> Ahg481850 jgi|Araly1|481850|fgenesh2_kg.4__910__AT2G29350.1
Length=1118
Score = 710 bits (384), Expect = 0.0
Identities = 660/790 (84%), Gaps = 32/790 (4%)
Strand=Plus/Plus
Query 1 ATGGCAAA-GAGAGGGGAAAGCTTGAGAGACAAACCT-AA-ATGGAGTCTTGAAGGCATG 57
|||||||| || ||||| ||||| |||| || || || ||||||||||| |||||||
Sbjct 104 ATGGCAAAGGA-AGGGG---GCTTGGGAGA-GAA-CTCAAGATGGAGTCTTGGAGGCATG 157
Query 58 -ACTGCTCTTGTTACCGGTGGATCTAAAGGCCTCGGAAAAGCTGTGGTGGAGGAACTAGC 116
|| |||||||| || ||||| ||||||||| |||| |||||||||| |||||||||||
Sbjct 158 AAC-GCTCTTGTCACTGGTGGCTCTAAAGGCATCGGGGAAGCTGTGGTAGAGGAACTAGC 216
Query 117 CATGTTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAAAGCTT 176
|| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 217 AATATTGGGAGCAAGAGTCCACACATGTGCCAGAGACGAAACTCAGCTTCAAGAACGCTT 276
Query 177 ACGTGAATGGCAAGCAAAAGGGTTACAAGTCACCACTTCTGTTTGCGATGTTTCTTCTCG 236
||||||||||||||| |||||||| || |||||||||||||| ||||| || ||||||||
Sbjct 277 ACGTGAATGGCAAGCCAAAGGGTTTCAGGTCACCACTTCTGTCTGCGACGTCTCTTCTCG 336
Query 237 TGACCAGCGAGAGAAACTCATGGAAACTGTTTCCTCTCTCTTCCAAGGAAAACTCAGCAT 296
|||||| |||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 337 TGACCAACGAGTGAAACTCATGGAAACTGTTTCCTCTCTCTACCAAGGAAAACTCAACAT 396
Query 297 CCTCGT-ACCCAATGTGGGAATAGGTG--TACTAAAGCCGACGACTGAGTGTACAGCAGA 353
|||||| | | |||||||||| | | || | |||||||| || |||| |||||||||
Sbjct 397 CCTCGTCAAC-AATGTGGGAAC-G-TCAATATTCAAGCCGACCACAGAGTATACAGCAGA 453
Query 354 AGAGTTCTCATTTATAATAGCTACAAATCTGGAGTCAACTTTCCATTTCTCGCAACTCGC 413
||| ||||| ||| |||| ||||||||||| |||||| |||||||| |||| || || ||
Sbjct 454 AGATTTCTCTTTTGTAATGGCTACAAATCTCGAGTCAGCTTTCCATCTCTCACAGCTTGC 513
Query 414 GCATCCTTTATTGAAAGCCTCTGGTTCAGGGAACATTGTGCTCATGTCTTC--CGTGGCT 471
||| || || ||||||||||| || ||||||| ||| ||||||||||| || | || ||
Sbjct 514 GCACCCATTGTTGAAAGCCTCCGGCTCAGGGAGCATCGTGCTCATGTCCTCTAC-TG-CT 571
Query 472 GGAGTTGTAAATTTGGGTAATACATCAATCTATGGAGCAACCAAAGGAGCCATGAATCAG 531
||||| || || | | | ||| |||||||||||||||||||||||||||||||||
Sbjct 572 GGAGTCGTGCATGTCAATGTTGGATCCATCTATGGAGCAACCAAAGGAGCCATGAATCAG 631
Query 532 CTGGCGAGAAATTTAGCATGCGAGTGGGCGAGTGATAATATAAGGGCTAATTCTGTTTGT 591
||||| ||||| ||||| ||||| |||||||| || || |||||| |||| |||||||||
Sbjct 632 CTGGCTAGAAACTTAGCTTGCGAATGGGCGAGCGACAACATAAGGACTAACTCTGTTTGT 691
Query 592 CCATGGT-TCATTACAACTCCGTCAACTAAAGATTTCCTCGGTGATAAAGATGTAAAAGA 650
|| |||| | || |||||| | | | ||| ||||| ||| ||| | || | ||| | |
Sbjct 692 CCTTGGTAT-ATCACAACTTCTTTGAGTAACGATTTTTTCGATGA-AGAGTT-TAAGA-A 747
Query 651 A-AAGGTGGAGAGT-GTGACACC-ATTGAGACGTGTTGGAGAGGCAAATGAAGTATCATC 707
| ||| || | || | |||||| || | ||||||||||||||||||||||||| |||||
Sbjct 748 AGAAGC-GGTGCGTAG-GACACCGATGG-GACGTGTTGGAGAGGCAAATGAAGTCTCATC 804
Query 708 GCTTGTTGCATTTCTATGTCTTCCCGCAGCTTCTTATATAACAGGTCAAACCATTTGCGT 767
|||||| |||||||| |||||||| |||||||||||||| || ||||| |||||||| ||
Sbjct 805 GCTTGTGGCATTTCTTTGTCTTCCTGCAGCTTCTTATATTACTGGTCAGACCATTTGTGT 864
Query 768 TGATGGAGGT 777
||| ||||||
Sbjct 865 TGACGGAGGT 874
> Ahg481843 jgi|Araly1|481843|fgenesh2_kg.4__903__AT2G29290.2
Length=1329
Score = 676 bits (366), Expect = 0.0
Identities = 638/769 (83%), Gaps = 20/769 (3%)
Strand=Plus/Plus
Query 39 ATGGAGTCTTGAAGGCATGACTGCTCTTGTTACCGGTGG-ATCTAAAGGCCTCGGAAAAG 97
|||||||||| |||| |||||||||||||| |||||||| | ||||||| |||| |||
Sbjct 512 ATGGAGTCTTCAAGGTATGACTGCTCTTGTGACCGGTGGCA-CTAAAGGAATCGGGGAAG 570
Query 98 CTGTGGTGGAGGAACTAGCCATGTTGGGAGCAAGAGTTCACACATGTGCCAGAGACGAAA 157
||||||||||||||||| | || |||||||||| ||| |||||||||||||||||||| |
Sbjct 571 CTGTGGTGGAGGAACTATCAATCTTGGGAGCAATAGTCCACACATGTGCCAGAGACGAGA 630
Query 158 CTCAGCTTCAAGAAAGCTTACGTGAATGGCAAGCAAAAGGGTTACAAGTCACCACTTCTG 217
|||||||||||||| | || | ||||||||||| ||||||||| || |||||||||||||
Sbjct 631 CTCAGCTTCAAGAACGTTTGCTTGAATGGCAAGAAAAAGGGTTTCAGGTCACCACTTCTG 690
Query 218 TTTGCGATGTTTCTTCT-CGTGACCAGCGAGAGAAACTCATGGAAACTGTTTCCTCTCTC 276
| ||||| ||||| ||| |||||||| |||||||||||||| ||||| ||||||||||||
Sbjct 691 TCTGCGACGTTTC-TCTGCGTGACCAACGAGAGAAACTCATCGAAACCGTTTCCTCTCTC 749
Query 277 TTCCAAGGAAAACTCAGCATCCTCGTACCCAATGTGGGAATAG-GTGTACTAAAGCCGAC 335
|||||||||||||||| ||||||||| ||||| |||| | | |||| ||||||||
Sbjct 750 TTCCAAGGAAAACTCAATATCCTCGTAAACAATGCAGGAA-CGTTTATACTTAAGCCGAC 808
Query 336 GACTGAGTGTACAGCAGAAGAGTTCTCATTTATAATAGCTACAAATCTGGAGTCAACTTT 395
|| |||| |||||||||||| ||||| |||||||| ||||||||||| |||||| ||||
Sbjct 809 CACAGAGTATACAGCAGAAGAATTCTCGTTTATAATGGCTACAAATCTCGAGTCAGCTTT 868
Query 396 CCAT-TTCTCGCAACTCGCGCATCCTTTATTGAAAGCCTCTGGTTCAGGGAACATTGTGC 454
|||| || || || || ||||| ||||| |||||||||||||| ||||||| ||||||||
Sbjct 869 CCATATT-TCACAGCTAGCGCACCCTTTGTTGAAAGCCTCTGGCTCAGGGAGCATTGTGC 927
Query 455 TCATGTCTTCCGTGGCTGGAGTTGTAAATTTGGGTAATACATCAATCTATGGAGCAACCA 514
||||||| || | || ||||| || || | || | ||| ||||||||||||||||
Sbjct 928 TCATGTCCTCAATTGCCGGAGTCGTGCATGTCAGTGTTGGATCCATCTATGGAGCAACCA 987
Query 515 AAGGAGCCATGAATCAGCTGGCGAGAAATTTAGCATGCGAGTGGGCGAGTGATAATATAA 574
|||||||||||||||||||||| ||||| ||||| ||||| ||||| || || || ||||
Sbjct 988 AAGGAGCCATGAATCAGCTGGCTAGAAACTTAGCTTGCGAATGGGCTAGCGACAACATAA 1047
Query 575 GGGCTAATTCTGTTTGTCCATGGTTCATTACAACTCCGTCAACTAAAGATT-TCCTCGGT 633
| |||| || |||||||| || | || | |||||| | | || ||| || || ||
Sbjct 1048 GAACTAACGCTATTTGTCCAGGGGTAATCAAAACTCCTTTGATTAGTGATCATC-TCAGT 1106
Query 634 GATAAAGATG-T-AAAAGAA-AAGGTGGAG-AGTGTGACACC-ATTGAGACGTGTTGGAG 688
|||||||| | | |||| || ||| | || | | || ||| || | | || |||||||
Sbjct 1107 GATAAAGA-GATTAAAA-AAGAAGCAG-AGCAACG-GATACCGATGGGG-CGCGTTGGAG 1161
Query 689 AGGCAAATGAAGTATCATCGCTTGTTGCATTTCTATGTCTTCCCGCAGCTTCTTATATAA 748
||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||| |
Sbjct 1162 AGGCAAATGAAGTTTCATCGCTTGTGGCATTTCTCTGTCTTCCTGCAGCTTCTTATATTA 1221
Query 749 CAGGTCAAACCATTTGCGTTGATGGAGGTTTCACTATTAACGGCTTCTC 797
| ||||| |||||||| |||||||||||| ||||| |||| ||||||||
Sbjct 1222 CTGGTCAGACCATTTGTGTTGATGGAGGTCTCACTGTTAATGGCTTCTC 1270
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 39533464929
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5