BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G29800.1
Length=1565
Score E
Sequences producing significant alignments: (Bits) Value
Ahg900756 jgi|Araly1|900756|Al_scaffold_0004_1406 1456 0.0
Ahg320730 jgi|Araly1|320730|fgenesh1_pm.C_scaffold_4000787 1434 0.0
Ahg933437 jgi|Araly1|933437|scaffold_401425.1 196 3e-49
Ahg481897 jgi|Araly1|481897|fgenesh2_kg.4__957__AT2G29780.1 121 2e-26
Ahg899437 jgi|Araly1|899437|Al_scaffold_0004_87 62.1 1e-08
> Ahg900756 jgi|Araly1|900756|Al_scaffold_0004_1406
Length=1320
Score = 1456 bits (788), Expect = 0.0
Identities = 1109/1260 (88%), Gaps = 37/1260 (3%)
Strand=Plus/Plus
Query 12 CTCTGAAACTTCCGACGACGGCTCTAACGGCGGCGTTCCaaacca-gaaacccgaagaac 70
||||||||||||||||||||| ||||||||||||| |||||| || ||||||||||||||
Sbjct 72 CTCTGAAACTTCCGACGACGGTTCTAACGGCGGCGATCCAAA-CATGAAACCCGAAGAAC 130
Query 71 cccacaagaaccc---acaagaagaaaaagagaatcaaaacgagaacccgaaTGAAGCAG 127
||||||||||||| | |||||||| ||||||||||||||||||||||||| |||| ||
Sbjct 131 CCCACAAGAACCCGAAAGAAGAAGAAGAAGAGAATCAAAACGAGAACCCGAAAGAAGAAG 190
Query 128 ATGAAGAAGACGATCATC---AAGACGAAGAAGTAGAGAATGTTCCTCCGATTCCTCGAA 184
|| ||||| ||||||||| |||| |||||||| |||||| |||||| ||||||||||
Sbjct 191 ATCAAGAAAACGATCATCAAGAAGAAGAAGAAGTGGAGAATCTTCCTCAGATTCCTCGAC 250
Query 185 AAATCCCACCAGTACTAATCGAAAACACTATCGCACCCCTCCGGAGATGTCATTACCCGA 244
|||||||||||| |||||||||||| || ||||||||| |||||||||||||||||||
Sbjct 251 AAATCCCACCAGAACTAATCGAAAAAACCATCGCACCCATCCGGAGATGTCATTACCCTT 310
Query 245 AGCTATCTCTCCTCTCTAACGCCTTTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAG 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 311 CGCTATCTCTCCTCTCTAACGCCTTTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAA 370
Query 305 TTCGCTCGCTCATCGGCTCAACGGAACCGGTTCTTTATACCTTGATCACGTTCAAGTACC 364
|||||| | |||||| | || |||||||||||||||||||||||||||||||||||||
Sbjct 371 CTCGCTCTCGCATCGGTTTGACCGAACCGGTTCTTTATACCTTGATCACGTTCAAGTACC 430
Query 365 CAACATTTGAAGAAGGAAGATGGTTCATTCTCCAACGGAGAAACAATACCTCTTTAAAAT 424
|||| ||||||||| |||||||||||||||||| ||||| ||||| | || ||| |||
Sbjct 431 CAACTTTTGAAGAACCAAGATGGTTCATTCTCCATCGGAGCAACAA--C-TCCTTACAAT 487
Query 425 TGAACTGTGTAACATCTCTTCCTCCCATGTTTCTTGGATGCACTGCCGTCACAATAGGTC 484
||||| | || || ||||||||||||||||||||||||||| | ||||||||||| || |
Sbjct 488 TGAACAGAGTTACTTCTCTTCCTCCCATGTTTCTTGGATGCGCCGCCGTCACAATGGGCC 547
Query 485 ACAAGATTTATGTAGTGGGTGGTTATAACTTCCGCTACAATAAAACCATAAGTACTGTGC 544
|||||||||| ||| |||||||||||||||||||||||||| |||| |||| ||| |||
Sbjct 548 ACAAGATTTACGTAATGGGTGGTTATAACTTCCGCTACAATCGAACCGTAAGGACTATGC 607
Query 545 TTGAGATAGATTGTAGATTCAATACGTGTCGACATCTCCGGAATATGAAGAGGGATCGTT 604
||| |||||||| ||||||||||||| |||||| |||||||||||| | | ||||||||
Sbjct 608 TTGTCATAGATTGCAGATTCAATACGTATCGACAGCTCCGGAATATGCATAAGGATCGTT 667
Query 605 GCTCCGCAGTCGCTGGAGTGATCGACGGAAGGATTTACGTAGTCGCCGGACGCCAGAGAC 664
||| ||||| ||||||||||||||||||||||||||||||||||| || ||| ||||||
Sbjct 668 GCTACGCAGCCGCTGGAGTGATCGACGGAAGGATTTACGTAGTCGGAGGTCGCAAGAGAC 727
Query 665 GATTTGATGATTGGGTCGAAGTGTTCGATGTAGAGACTGAGAGATGGGAACTTGTGCCTG 724
||| | |||||||||||||||||||| |||||||||||||| | ||||||||||||||||
Sbjct 728 GATATAATGATTGGGTCGAAGTGTTCAATGTAGAGACTGAGCGTTGGGAACTTGTGCCTG 787
Query 725 GTCCATTCTCTTCCTTTGCTAGTTCTAGTGGAAAGTTT-ATTGTACATGTGGTTTTGGAT 783
||||||||||| || ||||||||| ||| ||| ||||| || |||||||||||||||||
Sbjct 788 GTCCATTCTCTCCCCTTGCTAGTTATAGGGGAGAGTTTGATA-TACATGTGGTTTTGGAT 846
Query 784 AATAAGATTTACATTATGGATGGTGA-CTATTGTTTTGCGTACGATCCAAGGCGACGTAG 842
||||||||||||||| |||||| ||| | |||||||||| ||||||||||| ||||||||
Sbjct 847 AATAAGATTTACATTTTGGATGATGAGC-ATTGTTTTGCTTACGATCCAAGACGACGTAG 905
Query 843 ATGGGAGACTTGGGGACCTGAAAGTGCACAGAGGAGTTATTGGCACTTGTCGTCTTGTGT 902
||||||| |||||||| || ||||| ||||||||||| ||||||| ||||||||||||
Sbjct 906 ATGGGAGGCTTGGGGAATTGGAAGTGTACAGAGGAGTTTTTGGCACGCGTCGTCTTGTGT 965
Query 903 GGTTGATGATTTGTTGTACGCGATTGTTCCT---CGGGAGATTTTTGGAGCTTC-GATTG 958
||||||||||||||| || || ||||||| | ||||||||| |||| ||| |||||
Sbjct 966 GGTTGATGATTTGTTATATGCCATTGTTCTTGATCGGGAGATTGCAGGAG-TTCCGATTG 1024
Query 959 TCGTTTATGATCCAAGGGGAATAGCTTGGAGACCTGTCATGGGTTTAGAGTTTTGGCCTA 1018
|||||||||||||||||| ||| | ||||||| |||||| |||||||| |||||||||||
Sbjct 1025 TCGTTTATGATCCAAGGGAAATGGTTTGGAGATCTGTCAAGGGTTTAGCGTTTTGGCCTA 1084
Query 1019 AT---CTCGTTTATTTCGAGTCTAAAATGGCGAATTTTGGTGGGAAGTTGGTGATTTTGG 1075
|| ||||||||||||||||||| |||||||||| |||||||||| ||||| ||||||
Sbjct 1085 ATGATCTCGTTTATTTCGAGTCTAGTATGGCGAATTATGGTGGGAAGCTGGTGGTTTTGG 1144
Query 1076 GATGTTATCGGAGT-AGT-T--T-T-GATTATTAC-AGAAAAGACGTTTGGTGCGTTGAG 1128
|||||| ||||||| | | | | | ||||||||| | |||| | ||||||||||| |||
Sbjct 1145 GATGTTTTCGGAGTCATTATAGTATTGATTATTACGATAAAA-ATGTTTGGTGCGTAGAG 1203
Query 1129 GTGGCTTTGGAGAAACATGAAGATGGTCAAATTT-GGGGGAAGGTCGAATCACTCTCGCT 1187
||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||
Sbjct 1204 GTGGCTTTGGAGAAACATGAAGATGGTGAAATTTTGGGGGA-GGTCGAATCATTCTCGCC 1262
Query 1188 TGTGAA-TGCATTCC-CTATGTCGCCTTTCTTTGAGCTTTCTCGAACTGTTACGATTTGA 1245
|||||| | |||||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 1263 TGTGAAAT-CATTCCGC-ATGTCGCCTTTCTTTGAGCTTTCTCGAACTGTTACGGTTTGA 1320
> Ahg320730 jgi|Araly1|320730|fgenesh1_pm.C_scaffold_4000787
Length=1326
Score = 1434 bits (776), Expect = 0.0
Identities = 1046/1175 (89%), Gaps = 24/1175 (2%)
Strand=Plus/Plus
Query 86 aagaagaaaaagagaatcaaaacgagaacccgaaTGAAGCAGATGAAGAAGACGATCATC 145
|||||||| ||||||||||||||||| || |||| |||| |||| |||||||||||||
Sbjct 161 AAGAAGAAGAAGAGAATCAAAACGAGGACGCGAAAGAAGAAGATCAAGAAGACGATCAAG 220
Query 146 AAGACGAAGAAGTAGAGAATGTTCCTCCGATTCCTCGAAAAATCCCACCAGTACTAATCG 205
|||| ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||
Sbjct 221 AAGATGAAGAAGTAGAGAATCATCCTCCGATTCCTCGAGTAATCCCACCAGAACTAATCG 280
Query 206 AAAACACTATCGCACCCCTCCGGAGATGTCATTACCCGAAGCTATCTCTCCTCTCTAACG 265
||||||| ||||||| | |||||||||||||||||||| ||||||||||||||||||||
Sbjct 281 AAAACACCATCGCACTCATCCGGAGATGTCATTACCCGTCGCTATCTCTCCTCTCTAACG 340
Query 266 CCTTTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAGTTCGCTCGCTCATCGGCTCAA 325
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||| | |
Sbjct 341 CCTTTCGTCAAGTAATCTCTTCAGAGGATCTCTTCCAAATTCGCTCGCGCATCGGTTTGA 400
Query 326 CGGAACCGGTTCTTTATACCTTGATCACGTTCAAGTACCCAACATTTGAAGAAGGAAGAT 385
| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 401 CCGAACCGGTTCTTTATACCTTGATCACGTTCAAGTACCCAACTTTTGAAGAACCAAGAT 460
Query 386 GGTTCATTCTCCAACGGAGAAACAATACCTCTTTAAAATTGAACTGTGTAACATCTCTTC 445
||||||||||||| ||||| ||||| | || ||| |||||||| | || || |||||||
Sbjct 461 GGTTCATTCTCCATCGGAGCAACAA--C-TCCTTACAATTGAACAGAGTTACTTCTCTTC 517
Query 446 CTCCCATGTTTCTTGGATGCACTGCCGTCACAATAGGTCACAAGATTTATGTAGTGGGTG 505
|||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||
Sbjct 518 CTCCCATGTTTCTTGGATGCACTGCCGTCACAATGGGACACAAGATTTACGTAATGGGTG 577
Query 506 GTTATAACTTCCGCTACAATAAAACCATAAGTACTGTGCTTGAGATAGATTGTAGATTCA 565
|||||||| ||||||| ||| | || || | ||| |||||| |||||||| |||||||
Sbjct 578 GTTATAACCTCCGCTATAATCGAGCCGTAGGGACTATGCTTGCCATAGATTGCAGATTCA 637
Query 566 ATACGTGTCGACATCTCCGGAATATGAAGAGGGATCGTTGCTCCGCAGTCGCTGGAGTGA 625
|||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 638 ATACGTCTCGACAGCTCCGGAGTATGAAGAGGGATCGTTGCTACGCAGTCGCTGGAGTGA 697
Query 626 TCGACGGAAGGATTTACGTAGTCGCCGGACGCCAGAGACGATTTGATGATTGGGTCGAAG 685
|||||||||||||||||||||||| |||||| |||||||| || |||||||||||||||
Sbjct 698 TCGACGGAAGGATTTACGTAGTCGGAGGACGCGAGAGACGAATTAATGATTGGGTCGAAG 757
Query 686 TGTTCGATGTAGAGACTGAGAGATGGGAACTTGTGCCTGGTCCATTCTCTTCCTTTGCTA 745
||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||
Sbjct 758 TGTTCGATGTAGAGACTGAGAGATGGGCACTTGTGCCTGGTCCATTCTCTCCCATTGCTA 817
Query 746 GTTCTAGTGGAAAGTTTATTGTACATGTGGTTTTGGATAATAAGATTTACATTATGGATG 805
||||||||||| ||||| || ||||||||||||||||||||||||||||||||| ||||
Sbjct 818 GTTCTAGTGGAGAGTTTGTTACACATGTGGTTTTGGATAATAAGATTTACATTATAGATG 877
Query 806 GTGACTATTGTTTTGCGTACGATCCAAGGCGACGTAGATGGGAGACTTGGGGACCTGAAA 865
|||| | ||||||||||||||||||||| | ||||| |||| ||||||||||||||||||
Sbjct 878 GTGATTTTTGTTTTGCGTACGATCCAAGACAACGTACATGGCAGACTTGGGGACCTGAAA 937
Query 866 GTGCACAGAGGAG-TTATTGGCACTTGTCGTCTTGTGTGGTTGATGATTTGTTGTACGCG 924
||| ||||||||| || ||||||| |||||||||||||||||||||||||||||| ||
Sbjct 938 GTGTACAGAGGAGGTT-TTGGCACGCGTCGTCTTGTGTGGTTGATGATTTGTTGTATGCC 996
Query 925 ATTGTTCCTCGGGAGATTTTTGGAGCTTCGA-TTGTCGTTTATGATCCAAGGGGAA-TAG 982
| |||||||||||||||| |||||| ||| | ||||||| ||||||||||||| || | |
Sbjct 997 ACTGTTCCTCGGGAGATTGTTGGAG-TTCCAATTGTCGTGTATGATCCAAGGG-AAGTGG 1054
Query 983 CTTGGAGACCTGTCATGGGTTTAGAGTTTTGGCCTAATCTCGTTTAT-TTCGAGTCTAAA 1041
||||||||| ||||| ||||||||||||||||||||||||||||||| || ||||||| |
Sbjct 1055 CTTGGAGACATGTCAAGGGTTTAGAGTTTTGGCCTAATCTCGTTTATATT-GAGTCTAGA 1113
Query 1042 ATGGCGAATTTTGGTGGGAAGTTGGTGATTTTGGGATGTTATC---G--G--AGTAGTTT 1094
||| ||||||||||||||||||||||||||||||||||||||| | | || |||||
Sbjct 1114 ATGACGAATTTTGGTGGGAAGTTGGTGATTTTGGGATGTTATCAAAGCCGGGAG-AGTTT 1172
Query 1095 TGATTATTACAG--AAA-AGACGTTTGGTGCGTTGAGGTGGCTTTGGAGAAACATGAAGA 1151
|||||||||||| ||| ||| ||||||||||| ||||| || ||||| |||| ||||||
Sbjct 1173 TGATTATTACAGGGAAATAGATGTTTGGTGCGTAGAGGTTGCATTGGAAAAACGTGAAGA 1232
Query 1152 TGGTCAAATTTGGGGGAAGGTCGAATCACTCTCGCTTGTGAATGCATTCC-CTATGTCGC 1210
|||| | ||||||||||||||| |||||||||||||||||||| |||||| | | |||
Sbjct 1233 TGGTGATATTTGGGGGAAGGTCCAATCACTCTCGCTTGTGAATACATTCCGCAAAC-CGC 1291
Query 1211 CTTTCTTTGAGCTTTCTCGAACTGTTACGATTTGA 1245
|||| ||||| |||||||||||||||||| |||||
Sbjct 1292 CTTTTTTTGAACTTTCTCGAACTGTTACGGTTTGA 1326
> Ahg933437 jgi|Araly1|933437|scaffold_401425.1
Length=1309
Score = 196 bits (106), Expect = 3e-49
Identities = 949/1331 (71%), Gaps = 157/1331 (12%)
Strand=Plus/Plus
Query 11 TCTCTGAAACTTCCGACGACGGCTCTAACGGCGGCGTTCCaaacc-agaaac--c-cgaa 66
|||||||||||||||||||||| ||||| ||||||| ||| |||| |||| | | |||
Sbjct 34 TCTCTGAAACTTCCGACGACGGATCTAATGGCGGCGATCC-AACCAAGAATCTGCAAGAA 92
Query 67 g--aa-ccccacaagaacccacaagaagaaaaagagaat-caaaacgagaa--c-ccgaa 119
| || | || |||| || ||||||| | | ||| | || |||||||| | ||| |
Sbjct 93 GATAATCAAAACGAGAATCCTCAAGAAGTAGATGAG-CTACATAACGAGAATCCTCCG-A 150
Query 120 TGAAGC-AGATGAAGAAGACGAT-CATCAA-G---A--C-GAAGAAGTA-GAGAA-TG-T 167
| | ||| |||||||| ||| ||| || | | | |||||||| |||| |
Sbjct 151 TTCCTCAAGAAGAAGAAGA-GATACAT-AACGACAATCCTCAAGAAGTACTAGAAGAGAA 208
Query 168 TCCTCCGATTCCTCGAA-AAATCCCACCAG-TACTAATCGAAAACACT-ATCGCACCCCT 224
|| ||||||||||| || || ||||| || || | |||| | || | |||| | |
Sbjct 209 TCTTCCGATTCCTC-AAGAACTCCCAATAGATA-TCATCGTGAGCA-TCGTCGCTCTTAT 265
Query 225 CCGGAGATGTCATTACCCGAAGCTATCTCTCCTCTCTA-ACGCCTTTCGTCAAGTAATCT 283
|| ||||||||||||||| |||||||||| |||| | | ||||||||||||||||||
Sbjct 266 CCCAAGATGTCATTACCCGTCGCTATCTCTCGTCTCCAGA-GCCTTTCGTCAAGTAATCA 324
Query 284 CTTCAG-AGGATCTCTTCC-AAGTTCGCTCGCTCATCGGC-TCAACGGAACCGGTTCTTT 340
|||| | | || |||| || || |||||| | ||||| || || |||||||||||||
Sbjct 325 CTTC-GCATGAACTCTACCTAA-CGCGCTCGAACCTCGGCTTC-ACCGAACCGGTTCTTT 381
Query 341 ATACCTTGATCACGTTCAAGTACCCAACATTTGA-AGAAGGAAGATGGTTCATTCTCCAA 399
|| | || || || | | |||| | | | | ||| |||||| |||| |
Sbjct 382 ATGCGTTCAT--CG---GA-TTCCCACCGTAT-ATTCCTCCAAGCTGGTTCTTTCTTCGT 434
Query 400 CGGAGAAAC--A--ATACCTCTTTAAAATTGAACTGTGTAA--C-ATCTCTTCCTCCCAT 452
||||| ||| | || || ||||| |||| || | ||| | || |||||||| ||
Sbjct 435 CGGAGCAACTTAGGATTCC-CTTTACAATT--AC-GCATAATCCGTTCACTTCCTCCAAT 490
Query 453 GTTTCTTGGATGC-ACTGCCGTCACAATAGG-TCACAAGATTTA-TGTAGTGGGTGGTTA 509
||||| || | || ||| ||||| || || | ||||||| || | || ||||||||||
Sbjct 491 GTTTCCTGCA-GCTGCTGTGGTCACCATCGGAT-ACAAGATCTACT-TAATGGGTGGTTA 547
Query 510 TAACTT-CCGC-TAC-AATA--AAACCATA-AGTACTGTGCTTGAGATAGATTGTAGATT 563
||| || || | | | |||| | || || | |||||| ||| || ||||| |||||
Sbjct 548 TAA-TTCCCTCGT-CGAATATCGACCCGTATCG-ACTGTGGTTGTCATCGATTGCAGATT 604
Query 564 CAATACGTGTCGAC-ATCTCCGGAATATGAAG-AGGGATCGTTGCTC-CGCAGTC-GCTG 619
| ||||||| | | |||||| ||||||| | |||| ||||| | | |||| | || |
Sbjct 605 CCATACGTG-GGGCTATCTCCAGAATATG-CGAAGGGCTCGTTAC-CATGCAG-CAGCCG 660
Query 620 GAGTGA-TCGACGGAAGGATTTACGTAGTCGCCGGAC-GCCAGAGACGATTTGATGATTG 677
|||| | | ||||||| ||||||||| ||| || | || ||| | || |||||||||
Sbjct 661 GAGT-ATTTGACGGAAACATTTACGTAATCGGAGG-CTGCAAGAAAAGAGATGATGATTG 718
Query 678 GGTCGAAGTGTTCGATGTAGA-GACTGAGAGATGGG-AACTTGTGCCTGGTCCATTCTCT 735
||||||||||||| |||| || |||||||| |||| ||| ||||||| ||| || | ||
Sbjct 719 GGTCGAAGTGTTCAATGT-GACGACTGAGACTTGGGCAAC-TGTGCCTAGTCAATGCCCT 776
Query 736 TCCTTTGCTAGTTCTAGTGGAAAGTTTATTGTACATGTGGTTTTGGATAATAAGATTTAC 795
||||||| | |||| |||||||| | ||||||| || | | ||||| |
Sbjct 777 GAAGATGCTAGTGAGAATGGAGAGTTTATTACATATGTGGTGATGCAGGGGAGGATTTTC 836
Query 796 A-TTATGGATG-GTGACTATTGTTTTGCGTACGATCCAAG-GCGACGTAGATGGGAGACT 852
| || |||| | || |||||| || ||||| || || | | || |||| || |
Sbjct 837 ACTT-TGGA-GCTTGGGGGTTGTTTGGCTTACGAACC-AGTACAAGGTTTATGGCAGTCA 893
Query 853 TGGGGACCTGA--AAGTGCA-CAGAGGAG-TTATTGGCA--C-TTGTCGTCTTGTGTGGT 905
|||||| | | ||||| | || ||| || |||||| | | |||||||||||||||
Sbjct 894 TGGGGA-GT-ATTAAGTG-AGTTGATGAGATT-TTGGCACCCGTCGTCGTCTTGTGTGGT 949
Query 906 T-GATGATTTGTTGTACGCGA-TTGTTCCTCGGGAGATT-T-TTGGAGC-TTCGATTGTC 960
| || ||||||||||| || | ||| | || | | || | |||| | | |||| ||
Sbjct 950 TGGA-GATTTGTTGTATGC-ACTTGAT-CTTACGTG-TTCTCGTGGA-CATCCGATAGTG 1004
Query 961 GTTTATGATCC-AAGGGGAA-TAGCTTGGAGACCTGT-CATGGGT-T-TA-GAGT-T--T 1011
|| ||| |||| || ||| | | |||||||||||| || |||| | || | | |
Sbjct 1005 GTATATTATCCGAA--TGAATTGGTTTGGAGACCTGTGCA-GGGTGTATATTCTTATAAT 1061
Query 1012 TGGCCTAATCTC-GTT-TATTTCGAGTCTAAAATGGCGAATTTTGGTGGGAAGTTGGTGA 1069
| ||||| |||| ||| || || | |||||| ||||||||||||||||||||||||||||
Sbjct 1062 TTGCCTATTCTCAGTTATAATT-G-GTCTAAGATGGCGAATTTTGGTGGGAAGTTGGTGA 1119
Query 1070 TTTTGGGATGTTATCGGAGTAGT-TTTGATTATTACAGAAAAGACGTTTGGTGCGTTGAG 1128
||||| | || | || || | |||| | || | || | | |||||||| | |||
Sbjct 1120 TTTTGAG-TGGT---GGC-TATTCTTTG-TGGTTT-A-AAGATA--TTTGGTGCATAGAG 1169
Query 1129 GTGGCTTTGGAGAA-ACATGAAG-ATGGTCAAATTTGGGGGAAGGTCGAATCACTCTCGC 1186
| || ||||| || || | ||| | ||| ||||||||| |||| |||||| ||||||
Sbjct 1170 ATTGCGTTGGA-AATACGTCAAGGAAA-TCAGATTTGGGGGGAGGTTGAATCAATCTCGC 1227
Query 1187 TTGTGAAT-GCATTCCCT-ATG-T--CGCCTTTCTTTGAGCTTTCTCGAACTGTTACGAT 1241
||||| | | | | | ||| | |||||| | ||||||||| |||||||||||| |
Sbjct 1228 TTGTGTTTAG-AGACG-TGATGATGGCGCCTTCCATTGAGCTTTGTCGAACTGTTACTTT 1285
Query 1242 TTGATGACTCG 1252
||||||| |||
Sbjct 1286 TTGATGATTCG 1296
> Ahg481897 jgi|Araly1|481897|fgenesh2_kg.4__957__AT2G29780.1
Length=1435
Score = 121 bits (65), Expect = 2e-26
Identities = 85/94 (90%), Gaps = 4/94 (4%)
Strand=Plus/Plus
Query 1 ATGGCTAGT-ATCTCTGAAACTTCCGACGACGGCTCTAACGGCGGCGTTCCaaaccagaa 59
||||||| | |||||||||||||||||||||||||||||||| ||||| |||||| ||||
Sbjct 1 ATGGCTA-TAATCTCTGAAACTTCCGACGACGGCTCTAACGGTGGCGTACCAAACAAGAA 59
Query 60 acccgaagaaccccacaagaaccc-acaagaaga 92
| ||||||||| |||||||||||| | |||||||
Sbjct 60 ATCCGAAGAACTCCACAAGAACCCTA-AAGAAGA 92
> Ahg899437 jgi|Araly1|899437|Al_scaffold_0004_87
Length=1182
Score = 62.1 bits (33), Expect = 1e-08
Identities = 35/36 (97%), Gaps = 0/36 (0%)
Strand=Plus/Plus
Query 10 ATCTCTGAAACTTCCGACGACGGCTCTAACGGCGGC 45
||||||||||||||||||||||||||||| ||||||
Sbjct 10 ATCTCTGAAACTTCCGACGACGGCTCTAATGGCGGC 45
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58620887055
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5