BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G30770.1
Length=1632
Score E
Sequences producing significant alignments: (Bits) Value
Ahg481994 jgi|Araly1|481994|fgenesh2_kg.4__1054__AT2G30770.1 2431 0.0
Ahg320824 jgi|Araly1|320824|fgenesh1_pm.C_scaffold_4000881 2028 0.0
Ahg915064 jgi|Araly1|915064|Al_scaffold_0009_33 230 3e-59
> Ahg481994 jgi|Araly1|481994|fgenesh2_kg.4__1054__AT2G30770.1
Length=1545
Score = 2431 bits (1316), Expect = 0.0
Identities = 1471/1547 (95%), Gaps = 6/1547 (0%)
Strand=Plus/Plus
Query 1 CTTACATGAGCAATATTCAAGAAATGGAAATGATATTGAGT-ATCTCTTTGTGCTTAACG 59
|||||||||||||||||||| |||||||||||||| ||| | |||||||||||||| |||
Sbjct 1 CTTACATGAGCAATATTCAAAAAATGGAAATGATACTGA-TGATCTCTTTGTGCTTGACG 59
Query 60 ACCCTCATAACCCTTCTCTTGCTGAGGCGATTCCTCAAACGAACCGCCACTAAAGTGAAC 119
|||||| |||||||||| ||||| || ||||||||||||||| |||||||||||||||
Sbjct 60 ACCCTCTTAACCCTTCTATTGCTTAGAAAATTCCTCAAACGAACTGCCACTAAAGTGAAC 119
Query 120 CTACCACCATCTCCATGGAGGCTTCCGGTGATCGGAAACCTCCACCAGCTGAGCCTCCAT 179
| |||||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||
Sbjct 120 CGACCACCATCTCCATGGCGACTTCCGGTGATTGGAAACCTCCACCAGCTCAGCCTCCAC 179
Query 180 CCTCACCGTTCCCTCCGGTCCCTCAGTCTCAGGTACGGACCACTCATGCTCCTTCATTTT 239
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 180 CCTCACCGTTCCCTCCGGTCCCTCAGCCTCAGGTACGGACCTCTCATGCTCCTTCATTTT 239
Query 240 GGCCGTGTCCCTATACTCGTAGTCTCCTCCGGTGAAGCAGCTCAAGAGGTATTGAAAACA 299
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 GGCCGTGTCCCCATACTCGTAGTCTCCTCCGGTGAAGCAGCTCAAGAGGTATTGAAAACA 299
Query 300 CATGATCATAAATTTGCGAACCGCCCGAGATCAAAAGCCGTTCATGGGCTTATGAATGGT 359
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 300 CATGATCATAAGTTTGCGAACCGCCCGAGATCAAAAGCCGTTCGTGGGCTTATGAATGGT 359
Query 360 GGACGTGATGTTGTGTTTGCTCCCTATGGAGAATACTGGAGACAGATGAAGAGTGTATGC 419
|| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 360 GGGCGTGATGTGGTGTTTGCTCCCTATGGAGAATATTGGAGACAGATGAAGAGTGTATGC 419
Query 420 ATTCTCAATCTGCTCACCAACAAAATGGTTGAATCCTTTGAGAAGGTAAGAGAAGACGAG 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 420 ATTCTCAATCTGCTCACCAACAAAATGGTTGAATCCTTTGAGAAGGTAAGAGAAGAAGAG 479
Query 480 GTAAATGCAATGATCGAGAAGCTGGAGAAAGCAAGTTCTTCTTCTTCATCAGAAAATCTG 539
|||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 480 GTAACTGCAATGATGGAGAAGCTGGAGAAAGCAAGTTGTTCTTCTTCATCAGAAAATCTG 539
Query 540 AGCGAACTCTTTATAACTCTACCAAGCGATGTTACGAGTAGAGTTGCGTTGGGAAGAAAA 599
|| ||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 540 AGTGAAATCTTTATTACTCTACCAAGCGATGTTACGAGTAGGGTTGCCTTGGGAAGAAAA 599
Query 600 CATAGCGAGGACGAGACCGCAAGGGATCTCAAGAAGCGAGTGAGGCAGATCATGGAGCTT 659
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 600 CATAGCGAGGACGAAACCGCAAGGGATCTTAAGAAGCGAGTGAGGCAGATCATGGAGCTT 659
Query 660 TTAGGCGAGTTCCCGATCGGGGAATATGTCCCCATATTGGCATGGATAGATGGGATCCGT 719
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 660 TTAGGCGAGTTCCCGATCGGGGAATATGTCCCCATTTTGGGATGGATAGATGGGATCCGT 719
Query 720 GGTTTCAATAATAAAATTAAGGAAGTGAGTCGAGGGTTTAGCGATCTTATGGACAAAGTG 779
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 720 GGTTTCAATAATAAGATTAAGGAAGTGAGTCGCGGGTTTAGCGATCTTATGGACAAAGTG 779
Query 780 GTGCAAGAACATTTAGAGGC-GAGTAACGATAAAGCGGATTTCGTGGATATATTGTTATC 838
|||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||
Sbjct 780 GTGCAAGAACATTTAGAGGCGGACAAAC-ATAAAGCGGATTTCGTGGATATATTGTTATC 838
Query 839 AATCGAAAAAGATAAGAACAGTGGATTCCAAGTTCAAAGAAACGACATAAAATTTATGAT 898
|||||||||||| ||||| | ||||||||||||||||||| ||||||| |||||||||||
Sbjct 839 AATCGAAAAAGACAAGAATAATGGATTCCAAGTTCAAAGAGACGACATCAAATTTATGAT 898
Query 899 CTTGGATATGTTTATCGGAGGAACGTCAACAACTTCGACTCTACTAGAATGGACGATGAC 958
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 899 CTTGGATATGTTTATAGGAGGAACGTCAACAACTTCGACTCTACTAGAATGGACAATGAC 958
Query 959 GGAACTGATCAGAAGTCCAAAGAGTATGAAGAAACTCCAAGACGAGATTCGGTCAACTAT 1018
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 959 GGAACTGATCAGAAGTCCAAAGAGTATGAAGAATCTCCAAGACGAGATTCGGTCAACCAT 1018
Query 1019 TAGGCCACATGGTTCATACATAAAAGAAAAAGAAGTGGAAAATATGAAATACTTAAAAGC 1078
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1019 TAGGCCACATGGTTCATACATAAAAGAAAAAGAAGTTGAAAATATGAAATACTTGAAAGC 1078
Query 1079 CGTGATTAAAGAGGTGCTTCGGTTGCATCCTTCTCTTCCAATGATACTTCCCAGACTCTT 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 CGTGATTAAAGAGGTGCTTCGGTTGCATCCTTCTCTTCCAATGATACTTCCCAGACTCTT 1138
Query 1139 AAGTGAAGATGTCAAAGTAAAGGGATATAACATAGCCGCAGGGACAGAGGTGATAATCAA 1198
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1139 AAGTGAAGATGTCAAAGTAAAGGGATATAACATAGCCGCAGGGACAGAGGTGATCATCAA 1198
Query 1199 TGCTTGGGCGATCCAACGAGACACTGCGATATGGGGACCGGATGCTGAAGAATTCAAACC 1258
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1199 TGCTTGGGCGATCCAACGAGACACCGCGATATGGGGACCGGATGCTGAAGAATTCAAACC 1258
Query 1259 GGAGAGACACTTAGATTCAGGTTTAGATTATCACGGAAAAAATCTGAACTACATCCCATT 1318
||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||| |||||
Sbjct 1259 GGAAAGACACTTAGATTCAGCTTTGGATTATCACGGGAAAAATCTGAACTACATTCCATT 1318
Query 1319 CGGATCAGGGAGAAGGATATGCCCCGGGATAAATCTTGCTTTGGGTCTGGCAGAGGTGAC 1378
||| |||||||||||||| || |||||||||||||||||||||||| |||||||||||||
Sbjct 1319 CGGTTCAGGGAGAAGGATTTGTCCCGGGATAAATCTTGCTTTGGGTTTGGCAGAGGTGAC 1378
Query 1379 AGTGGCCAACCTTGTAGGCCGATTTGACTGGAGGGTAGAGGCTGGACCAAATGGGGATCA 1438
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1379 AGTGGCCAACCTTGTAGGCCGATTTGACTGGAAGGTAGAGGCTGGACCAAATGGGGATCA 1438
Query 1439 ACCTGATCTAACTGAAGCCATTGGTATCGATGTTTGCCGCAAAT-TCCCTCTCATTGCAT 1497
|||||||||| ||||||||||||||||||||||||||||||| | ||| |||||||||||
Sbjct 1439 ACCTGATCTAGCTGAAGCCATTGGTATCGATGTTTGCCGCAAGTCTCC-TCTCATTGCAT 1497
Query 1498 TTCCATCTTCGGTTGTGTAACATGTTTTCTCTTTCACCTTGTTATGC 1544
|||||||||| ||| ||||||||||||||||||||| || |||||||
Sbjct 1498 TTCCATCTTCTGTTATGTAACATGTTTTCTCTTTCATCTCGTTATGC 1544
> Ahg320824 jgi|Araly1|320824|fgenesh1_pm.C_scaffold_4000881
Length=1512
Score = 2028 bits (1098), Expect = 0.0
Identities = 1376/1512 (91%), Gaps = 12/1512 (1%)
Strand=Plus/Plus
Query 6 ATGAGCAATATTCAAGAAATGGAAATGATATTGAGT-ATCTCTTTGTGCTTAACGACCCT 64
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 1 ATGAGCAATATTCAAGAAATGGAAATGATATTGA-TGGTCTCTTTGTGCTTAACGACCCT 59
Query 65 CATAACCCTTCTCTTGCTGAGGCGATTCCTCAAACGAACCGCC-ACTAAAGTGAACCTAC 123
| |||||||||||||||| | | ||||||||||||||||||| || ||||||||| |||
Sbjct 60 CTTAACCCTTCTCTTGCTTAAACAATTCCTCAAACGAACCGCCAAC-AAAGTGAACTTAC 118
Query 124 CACCATCTCCATGGAGGCTTCCGGTGATCGGAAACCTCCACCAGCTGAGCCTCCATCCTC 183
|||||||||||||| | ||||||||||| ||||||||||||||||| |||||||| ||||
Sbjct 119 CACCATCTCCATGGCGACTTCCGGTGATTGGAAACCTCCACCAGCTCAGCCTCCACCCTC 178
Query 184 ACCGTTCCCTCCGGTCCCTCAGTCTCAGGTACGGACCACTCATGCTCCTTCATTTTGGCC 243
|||||||||||| |||||||| ||| ||||||||||||||||||| |||||||||||||
Sbjct 179 ACCGTTCCCTCCATTCCCTCAGCCTCCGGTACGGACCACTCATGCTGCTTCATTTTGGCC 238
Query 244 GTGTCCCTATACTCGTAGTCTCCTCCGGTGAAGCAGCTCAAGAGGTATTGAAAACACATG 303
||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||| |
Sbjct 239 GTGTCCCCATACTCGTAGTATCCTCCGGCGAAGCAGCTCATGAGGTATTGAAAACACACG 298
Query 304 ATCATAAATTTGCGAACCGCCCGAGATCAAAAGCCGTTCATGGGCTTATGAATGGTGGAC 363
||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 299 ATCTTAAGTTTGCCAACCGCCCGAGATCAAAAGCCGTTCGTGGGCTTATGAATGGTGGGC 358
Query 364 GTGATGTTGTGTTTGCTCCCTATGGAGAATACTGGAGACAGATGAAGAGTGTATGCATTC 423
||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 359 GTGATGTGGTGTTTGGTCCCTATGGAGATTATTGGAGACAGATGAAGAGTGTATGCATTC 418
Query 424 TCAATCTGCTCACCAACAAAATGGTTGAATCCTTTGAGAAGGTAAGAGAAGACGAGGTAA 483
||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||
Sbjct 419 TCAATCTGCTCACCAACAAAATGGTTGCGTCCTTTGAGAAGATAAGAGAAGAAGAGGTAA 478
Query 484 ATGCAATGATCGAGAAGCTGGAGAAAGCAAGTTCTTCTTCTTCATCAGAAAATCTGAGCG 543
|||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 479 ATGCAATGATTGAGAAGCTGGAGAAAGCAAGTTGTTCTTCTTCATCAGAAAACCTGAGCG 538
Query 544 AACTCTTTATAACTCTACCAAGCGATGTTACGAGTAGAGTTGCGTTGGGAAGAAAACATA 603
|||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 539 AACTCTTTGTTACTCTACCAAGCGATGTTACGAGTAGAGTTGCCTTGGGAAGAAAACATA 598
Query 604 GCGAGGACGAGACCGCAAGGGATCTCAAGAAGCGAGTGAGGCAGATCATGGAGCTTTTAG 663
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 599 GCGAGGACGAAACCGCAAGGGATCTTAAGAAGCGAGTGAGGCAGATCATGGAGCTTTTAG 658
Query 664 GCGAGTTCCCGATCGGGGAATATGTCCCCATATTGGCATGGATAGATGGGATCCGTGGTT 723
|||||||||| |||||||| ||||| || | |||||||||||||| ||||| ||||
Sbjct 659 GCGAGTTCCCAATCGGGGACTATGTTCCGGTTTTGGCATGGATAGACAGGATCAACGGTT 718
Query 724 TCAATAATAAAATTAAGGAAGTGAGTCGAGGGTTTAGCGATCTTATGGACAAAGTGGTGC 783
||||| || |||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 719 TCAATGCTAGAATTAAGGAAGTAAGTCAAGGGTTTAGCGATCTTATGGACAAAGTGGTGC 778
Query 784 AAGAACATTTAGAGGCGAG-TAA-CGATAAAGCGGATTTCGTGGATATATTGTTATCAAT 841
|||||||| ||||||| || ||| | |||||| ||||||||| |||||| ||||||||||
Sbjct 779 AAGAACATCTAGAGGC-AGGTAATC-ATAAAGAGGATTTCGTCGATATACTGTTATCAAT 836
Query 842 CGAAAAAGATAAGAACAGTGGATTCCAAGTTCAAAGAAACGACATAAAATTTATGATCTT 901
|||||| || |||| | ||||||| ||| ||||||||||||||| ||||| ||||| ||
Sbjct 837 CGAAAACGAGAAGAGTATTGGATTCGAAGCTCAAAGAAACGACATCAAATTCATGATATT 896
Query 902 GGATATGTTTATCGGAGGAACGTCAACAACTTCGACTCTACTAGAATGGACGATGACGGA 961
|||||||||||| ||||| |||||||||| ||| |||||||||||||||| ||||||||
Sbjct 897 GGATATGTTTATAGGAGGGACGTCAACAAGTTCAACTCTACTAGAATGGATAATGACGGA 956
Query 962 ACTGATCAGAAGTCCAAAGAGT-ATGAAGAAACTCCAAGACGAGATTCGGTCAACTATTA 1020
|||||||||| |||||| || |||||||||||||||||||||||||||||||| ||||
Sbjct 957 GCTGATCAGAAATCCAAAT-GTTATGAAGAAACTCCAAGACGAGATTCGGTCAACCATTA 1015
Query 1021 GGCCACATGGTTCATACATAAAAGAAAAAGAAGTGGAA-AATATGAAATACTTAAAAGCC 1079
|||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct 1016 GGCCACATGGTTCATACATAAAAGAAAAAGAAGTT-AATAATATGAAATACTTGAAAGCC 1074
Query 1080 GTGATTAAAGAGGTGCTTCGGTTGCATCCTTCTCTTCCAATGATACTTCCCAGACTCTTA 1139
||||||||||||||| |||||||||||||| |||||||| | |||||||| ||||| |||
Sbjct 1075 GTGATTAAAGAGGTGTTTCGGTTGCATCCTCCTCTTCCACTAATACTTCCTAGACTATTA 1134
Query 1140 AGTGAAGATGTCAAAGTAAAGGGATATAACATAGCCGCAGGGACAGAGGTGATAATCAAT 1199
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1135 AGTGAAGATGTCAAAGTAAAGGGATATAACATAGCGGCAGGGACAGAGGTTATAATCAAT 1194
Query 1200 GCTTGGGCGATCCAACGAGACACTGCGATATGGGGACCGGATGCTGAAGAATTCAAACCG 1259
|||||||| |||||| ||||| | |||||||||||||||||||| ||||||||||||||
Sbjct 1195 GCTTGGGCAATCCAAAGAGACCCCGCGATATGGGGACCGGATGCCGAAGAATTCAAACCA 1254
Query 1260 GAGAGACACTTAGATTCAGGTTTAGATTATCACGGAAAAAATCTGAACTACATCCCATTC 1319
|||||||||||||||||| ||| |||||||| ||||| || |||||| ||||||||||
Sbjct 1255 GAGAGACACTTAGATTCAACTTTGGATTATCATGGAAAGGATTTGAACTTCATCCCATTC 1314
Query 1320 GGATCAGGGAGAAGGATATGCCCCGGGATAAATCTTGCTTTGGGTCTGGCAGAGGTGACA 1379
|||||||| |||||||| || || ||||||||||| ||||||||| ||| |||||| |||
Sbjct 1315 GGATCAGGTAGAAGGATTTGTCCTGGGATAAATCTGGCTTTGGGTTTGGTAGAGGTTACA 1374
Query 1380 GTGGCCAACCTTGTAGGCCGATTTGACTGGAGGGTAGAGGCTGGACCAAATGGGGATCAA 1439
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 1375 GTGGCCAACCTTGTAGGCCGATTTGACTGGAGGGTCGAGGCTGGACCAAATGCGGATCAA 1434
Query 1440 CCTGATCTAACTGAAGCCATTGGTATCGATGTTTGCCGCAAATTCCCTCTCATTGCATTT 1499
|||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||
Sbjct 1435 CCTGATCTGGCTGAAGCCGCTGGTCTCGATGTTTGCCGCAAGTTCCCTCTCATTGCATTT 1494
Query 1500 CCATCTTCGGTT 1511
|||||||| |||
Sbjct 1495 CCATCTTCAGTT 1506
> Ahg915064 jgi|Araly1|915064|Al_scaffold_0009_33
Length=1473
Score = 230 bits (124), Expect = 3e-59
Identities = 442/590 (75%), Gaps = 43/590 (7%)
Strand=Plus/Plus
Query 42 ATCTCTTTGTGCTTAACGACCCTCATAACCCTTCT-CTTGCT-GAGGCGATTCCTCAAAC 99
||| |||| |||||||| |||||| | | ||||| | | || | | | |||| |||
Sbjct 19 ATCACTTTATGCTTAACAACCCTCCTTGCACTTCTAC-TCCTAAAATCCA-TCCTTAAAA 76
Query 100 GAACC-GC-C-ACTAAAGTGAACCTACCACCATCTCCATGGAGGCTTCCGGTGATCGGAA 156
||||| | | || ||| | ||||||||||| || ||| || | ||||||||||||||||
Sbjct 77 GAACCACCACAACCAAACTCAACCTACCACCGTCACCAAGGCGACTTCCGGTGATCGGAA 136
Query 157 ACCTCCACCAGCTGAGCCTCCATCCTCACCGTTCCCTCCGGTCCCTCAGTCTC-AGGTAC 215
||||||||||||| |||||| || ||||||| || ||||| ||||| |||||| | ||
Sbjct 137 ACCTCCACCAGCTCAGCCTCAATACTCACCGCTCTCTCCGCTCCCTGAGTCTCCAA-TAT 195
Query 216 GGACCACTCATGCTCCTTCATTTTGGCCGTGTC-CCTA-TACTCGTAGTCTCCTCCGGTG 273
|||||||||||||| |||||||| ||||| | || | | || |||||||||||| |
Sbjct 196 GGACCACTCATGCTTCTTCATTTCGGCCGCA-CACC-AGTCCTTATAGTCTCCTCCGCCG 253
Query 274 AAGCAGCTCAAGAGGTATTGAAAACACATGATCATAAATT-TGCGAACCGCCCGAGATCA 332
| | ||||| || | ||||| || | ||| || || ||| |||||||| | | ||
Sbjct 254 ACGTTGCTCATGACATCTTGAAGACGTACGATGTTAT-TTGTGCCAACCGCCCAAAAACA 312
Query 333 AAAGCCG-TTCATGGGCTTATGAATGGTGG-ACGTGATGTTG-TGTTTGCTCCCT-ATGG 388
|||| | || || || |||| ||||| | | ||||| | | ||||| |||| ||||
Sbjct 313 AAAGT-GATTGATAAAATTTTGAAAGGTGGCA-GAGATGTGGCT-TTTGC-CCCTTATGG 368
Query 389 AGAATACTGGAGACAGATGAAGAGTGT-ATGCATTCTCAATCTGCTCACCAACAAAATGG 447
||||| ||||||||||| |||||| | | |||| | ||||| |||| |||||||||||
Sbjct 369 GGAATATTGGAGACAGATAAAGAGTATTA-GCATCCAGAATCTACTCAGCAACAAAATGG 427
Query 448 TT-GAATCCTT-TGAGAAGGTAAGAGAAGACGAGGTAAATGC-AATGATCGAGAAGCTGG 504
| | || || |||||| |||||||||| ||| |||| | |||||| || ||| |||
Sbjct 428 TCAGG-TC-TTATGAGAAAATAAGAGAAGAGGAGATAAAA-CTAATGATTGAAAAGATGG 484
Query 505 AGAAAGCAAGTTCTTCTTCT--TCA-TCA--GA-AAATCTGAGCGAACTCTTTA-TAACT 557
| ||||| |||| ||||||| || ||| | |||||| ||| |||| | || | |||
Sbjct 485 AAAAAGCGAGTTGTTCTTCTCCTCCCTCACCGGTAAATCTAAGCCAACT-TCTAATGACT 543
Query 558 CT-ACCAAGCGATGTTACGA-GTAGAGTTGCGTTGGGAAGAAAACATAGC 605
| || || |||| | | | |||||| ||| |||||||||||| |||||
Sbjct 544 TTGACAAA-CGATATAAT-ATGTAGAGCTGCCTTGGGAAGAAAATATAGC 591
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 61172933470
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5