BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G31030.1
Length=1470
Score E
Sequences producing significant alignments: (Bits) Value
Ahg933629 jgi|Araly1|933629|scaffold_401617.1 2135 0.0
Ahg482026 jgi|Araly1|482026|fgenesh2_kg.4__1086__AT2G31020.1 1851 0.0
Ahg489733 jgi|Araly1|489733|fgenesh2_kg.6__2867__AT4G08180.3 974 0.0
> Ahg933629 jgi|Araly1|933629|scaffold_401617.1
Length=1507
Score = 2135 bits (1156), Expect = 0.0
Identities = 1372/1473 (93%), Gaps = 27/1473 (2%)
Strand=Plus/Plus
Query 1 ATGGAAGCTAGAGTAATTTCTTGCACTACTTTTGGAGACAACAAGGTCGTGAAGATTGCT 60
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 21 ATGGAAGCTAGAGTAATTTCTTGCACTACTTTTGGGGACGACAAGGTCGTGAAGATTGCT 80
Query 61 GTTCTGAATCATCAAGCAATTACCAAATACAAAGCCGGAGAAAACGAAACGACGGTTGTT 120
|||| ||||||||||||||||||||||||||||||||||||||||| || || ||| ||
Sbjct 81 GTTCCAAATCATCAAGCAATTACCAAATACAAAGCCGGAGAAAACGAGACTACTGTTATT 140
Query 121 GTTTCCGATGATACATGCCCGGAGAAAGATGTCAAAGAGATTAAGAAAT-TCTGTGAGAA 179
||||| |||||||| ||| |||||||||||||||||||||||||||| | | ||||||||
Sbjct 141 GTTTCTGATGATACGTGCTCGGAGAAAGATGTCAAAGAGATTAAGAAGTGT-TGTGAGAA 199
Query 180 GCTCGGTTACGTTTACGAAGGCAGACTTAGCGAAGAGTACACTCAAACCAACACTGGACC 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 200 GCTCGGTTACGTTTACGAAGGCAGACTTAACGAAGAGTACACTCAAACCAACACTGGACC 259
Query 240 CGATGATGATTGGATTACTAATGGCTTTGAGTCAGATGATGACGTTGATCCTTCTATCAA 299
| ||||| ||| | ||||||||||| ||||| |||||||||||||||||
Sbjct 260 C---GATGA-TGG--------T---TTTGAGTCAGAGGATGATGTTGATCCTTCTATCAA 304
Query 300 GACTATTGGATTTAACTATCCTCATGTCAATA-GACGAAATAAATTACCTGATCCGGTTG 358
||||||||||| |||||||||||||||||| | ||||||| || ||||||||||||||||
Sbjct 305 GACTATTGGATCTAACTATCCTCATGTCAA-ACGACGAAAGAAGTTACCTGATCCGGTTG 363
Query 359 AAAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAACATTGGCAAGGATCTTA 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 364 AAAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAACATTGGCAAGGATCTCA 423
Query 419 CTAAAGTTTGTCTTCCTGTTTACTTCAATGAGCCACTATCCTCTCTACAAAAATGCTTTG 478
| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 424 CAAAAGTTTGTCTTCCTGTTTACTTCAATGAGCCTTTATCTTCTCTACAAAAATGCTTTG 483
Query 479 AAGATTTGGAGTATTCATATCTTCTTGATCAAGCTTCTGAATGGGG-AAAAAGGGGCAAT 537
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct 484 AAGATTTGGAGTATTCATATCTTCTTGATCAAGCATCTGAATGGGGGAAAAAGGG-CAAT 542
Query 538 AACCTTATGAGGATTTTGAATGTAGCTGCATTTGCTGTATCTGGTTATGCATCAACTAAA 597
||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 543 AACCTCATGAGGATTCTGAATGTAGCTGCATTTGCTGTATCCGGTTATGCATCAACCGAA 602
Query 598 GGAAGAATTTGCAAACCCTTTAATCCAATGTTAGGGGAAACATACGAGGCTGATTATCCC 657
|||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct 603 GGAAGAATATGCAAACCTTTTAATCCAATGTTAGGTGAAACATATGAGGCTGATTATCCC 662
Query 658 GATAAAGGCCTTCGATTTTTCTCGGAAAAGGTAAGTCATCATCCTATGATTGTGGCATGT 717
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 663 GATAAAGGCCTTCGATTTTTCTCGGAAAAGGTGAGTCATCATCCTATGATTGTGGCATGC 722
Query 718 CATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAGCAATTTAAAAAGCAAATTTTGG 777
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 723 CATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAGTAATTTAAAAAGCAAATTTTGG 782
Query 778 GGTCGATCAATTCAGCTCGATCCTATCGGTTTGTTGACTTTACAATTTGATGATGGTGAA 837
||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||
Sbjct 783 GGTCGATCAATTCAGCTTGATCCTATTGGTTTGTTGACTTTGCAATTTGATGATGGTGAA 842
Query 838 ATTGTGCAATGGAGTAAGGTGACTACATCAATATACAATCTCATACTTGGTAAATTGTAT 897
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 843 ATTGTACAATGGAGCAAGGTGACTACATCAATATACAATCTCATACTTGGTAAATTGTAT 902
Query 898 TGTGATCATTATGGGACTATGCTGATTGAAGGTAACGGTGAATACTCATGTAAACTTAAA 957
|||||||| |||||||| |||| |||||||||||| || |||||||||||||||||||||
Sbjct 903 TGTGATCACTATGGGACAATGCGGATTGAAGGTAATGGCGAATACTCATGTAAACTTAAA 962
Query 958 TTCAAGAAACAGTCGATGATGGATAGAAATCCGCATCAAGTTCAAGGTATAGTAGAAGAC 1017
|||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 963 TTCAAGGAACAGTCGATGATCGATAGAAATCCTCATCAAGTTCAAGGTATAGTAGAAGAC 1022
Query 1018 AAGAATGGAAAAACAGTGGCTAAGTTGTTTGGAAAATGGGATGAGAGTATG-TACTATGT 1076
|| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1023 AAAAATGGAAAAACAGTGGCTAAGTTGTTTGGAAAATGGGATGAGAGTATGCT-CTATGT 1081
Query 1077 GATGGTCAATCAAGGAAAGGAGAGTGAATCTCATCTTTTGTGGAAACGAAACAAACCTCT 1136
|||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1082 GATGGTCAATCAAGGAAAGGTGAATGAATCTCATCTTTTGTGGAAACGAAACAAACCTCC 1141
Query 1137 CGAAAACCCTACAAAGTACAATCTTACACGGTTTGGGATCACATTAAACGAGCTCACGCC 1196
||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct 1142 CGAAAACCCGACAAAGTATAATCTAACACGGTTTGGGATCACATTAAACGAGCTAACGCC 1201
Query 1197 TGATTTAAAGGA-AATGTTGCCACCAACAGATTCCAGACTTAGACCGGACCAAAGGTATT 1255
|| ||||||||| || |||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 1202 TGGTTTAAAGGAGAA-GTTGCCACCAACAGATTCAAGACTTAGACCAGACCAAAGGTATT 1260
Query 1256 TGGAAAAAGGAGAGTTTGAAATGGgaaacagag-agaagttgaggttagaacaaaggcaa 1314
|||| || |||||||||||||||||||| | | ||||||||||||| |||||||| |||
Sbjct 1261 TGGAGAAGGGAGAGTTTGAAATGGGAAAT-GCGGAGAAGTTGAGGTTGGAACAAAGACAA 1319
Query 1315 agacaggcgagagagaaacaagagagaggCTGGAAACCAACGTGGTTTAGTAAAGAGAAA 1374
|||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||
Sbjct 1320 AGACAGGCGAGAGAGATGCAAGAGAGAGGTTGGAAACCAAAGTGGTTTAGAAAAGAGAAA 1379
Query 1375 GGAAGTGAGACTTATAGATACATTGGAGGTTATTGGGAGGCTCGAGATTCTGGTCGCTGG 1434
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||
Sbjct 1380 GGAAGTGAGACTTATAGATACGTTGGAGGTTATTGGGAAGCTCGAGATTCTGGTCGTTGG 1439
Query 1435 GATGATTGTCCTGACATCTTTGGTCAAGTTCAC 1467
|||||||||||||||||||||||||||||||||
Sbjct 1440 GATGATTGTCCTGACATCTTTGGTCAAGTTCAC 1472
> Ahg482026 jgi|Araly1|482026|fgenesh2_kg.4__1086__AT2G31020.1
Length=2385
Score = 1851 bits (1002), Expect = 0.0
Identities = 1156/1231 (94%), Gaps = 8/1231 (1%)
Strand=Plus/Plus
Query 241 GATGATGATTGGATTACTAATGGCTTTGAGTCAGATGATGACGTTGATCCTTCTATCAAG 300
||||||||| ||||| ||||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct 1039 GATGATGATGGGATTGCTAATGGTTTTGAGTCAGAAGATGATGTTGATCCTTCTATCAAG 1098
Query 301 ACTATTGGATTTAACTATCCTCATGTCAATA-GACGAAATAAATTACCTGATCCGGTTGA 359
|||||||||||||||||||||||||||| | ||||||| || |||||||| ||||||||
Sbjct 1099 TCTATTGGATTTAACTATCCTCATGTCAA-ACGACGAAAGAAGTTACCTGAACCGGTTGA 1157
Query 360 AAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAACATTGGCAAGGATCTTAC 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1158 AAAAGAGAAAAGTGTTAGCCTTTGGTCAATGATCAAAGACAACATTGGCAAGGATCTCAC 1217
Query 420 TAAAGTTTGTCTTCCTGTTTACTTCAATGAGCCACTATCCTCTCTACAAAAATGCTTTGA 479
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 1218 AAAAGTTTGTCTTCCTGTTTACTTCAATGAGCCTTTATCTTCTCTACAAAAATGCTTTGA 1277
Query 480 AGATTTGGAGTATTCATATCTTCTTGATCAAGCTTCTGAATGGGG-AAAAAGGGGCAATA 538
||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 1278 AGATTTGGAGTATTCATATCTTCTTGATCAAGCATCTGAATGGGGGAAAAAGGG-CAATA 1336
Query 539 ACCTTATGAGGATTTTGAATGTAGCTGCATTTGCTGTATCTGGTTATGCATCAACTAAAG 598
|||| ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1337 ACCTCATGAGGATTCTGAATGTAGCTGCATTTGCTGTATCCGGTTATGCATCAACCGAAG 1396
Query 599 GAAGAATTTGCAAACCCTTTAATCCAATGTTAGGGGAAACATACGAGGCTGATTATCCCG 658
||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1397 GAAGAATATGCAAACCTTTTAATCCAATGTTAGGTGAAACATATGAGGCTGATTATCCCG 1456
Query 659 ATAAAGGCCTTCGATTTTTCTCGGAAAAGGTAAGTCATCATCCTATGATTGTGGCATGTC 718
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1457 ATAAAGGCCTTCGATTTTTCTCGGAAAAGGTGAGTCATCATCCTATGATTGTGGCATGCC 1516
Query 719 ATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAGCAATTTAAAAAGCAAATTTTGGG 778
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1517 ATTGTGATGGCACCGGATGGAAATTTTGGGGAGATAGTAATTTAAAAAGCAAATTTTGGG 1576
Query 779 GTCGATCAATTCAGCTCGATCCTATCGGTTTGTTGACTTTACAATTTGATGATGGTGAAA 838
|||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||
Sbjct 1577 GTCGATCAATTCAGCTTGATCCTATTGGTTTGTTGACTTTGCAATTTGATGATGGTGAAA 1636
Query 839 TTGTGCAATGGAGTAAGGTGACTACATCAATATACAATCTCATACTTGGTAAATTGTATT 898
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1637 TTGTACAATGGAGCAAGGTGACTACATCAATATACAATCTCATACTTGGTAAATTGTATT 1696
Query 899 GTGATCATTATGGGACTATGCTGATTGAAGGTAACGGTGAATACTCATGTAAACTTAAAT 958
||||||| |||||||| |||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 1697 GTGATCACTATGGGACAATGCGGATTGAAGGTAACGGCGAATACTCATGTAAACTTAAAT 1756
Query 959 TCAAGAAACAGTCGATGATGGATAGAAATCCGCATCAAGTTCAAGGTATAGTAGAAGACA 1018
| ||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1757 TTAAGGAACAGTCGATGATCGATAGAAATCCTCATCAAGTTCAAGGTATAGTAGAAGACA 1816
Query 1019 AGAATGGAAAAACAGTGGCTAAGTTGTTTGGAAAATGGGATGAGAGTATGTACTATGTGA 1078
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1817 AAAATGGAAAAACAGTGGCTAAGTTGTTTGGAAAATGGGATGAGAGTATGCACTATGTGA 1876
Query 1079 TGGTCAATCAAGGAAAGGAGAGTGAATCTCATCTTTTGTGGAAACGAAACAAACCTCTCG 1138
||||||||||||||| || || ||||||||||||||||||||||||||||||||||| ||
Sbjct 1877 TGGTCAATCAAGGAAGGGTGAATGAATCTCATCTTTTGTGGAAACGAAACAAACCTCCCG 1936
Query 1139 AAAACCCTACAAAGTACAATCTTACACGGTTTGGGATCACATTAAACGAGCTCACGCCTG 1198
||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1937 AAAACCCGACAAAGTATAATCTAACACGGTTTGGGATCACATTAAACGAGCTAACGCCTG 1996
Query 1199 ATTTAAAGGA-AATGTTGCCACCAACAGATTCCAGACTTAGACCGGACCAAAGGTATTTG 1257
||||||||| || |||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1997 GTTTAAAGGAGAA-GTTGCCACCAACAGATTCAAGACTTAGACCAGACCAAAGGTATTTG 2055
Query 1258 GAAAAAGGAGAGTTTGAAATGGgaaacagag-agaagttgaggttagaacaaaggcaaag 1316
|| || |||||||||||||||||||| | | ||||||||||||| |||||||| |||||
Sbjct 2056 GAGAAGGGAGAGTTTGAAATGGGAAAT-GCGGAGAAGTTGAGGTTGGAACAAAGACAAAG 2114
Query 1317 acaggcgagagagaaacaagagagaggCTGGAAACCAACGTGGTTTAGTAAAGAGAAAGG 1376
|||||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||
Sbjct 2115 ACAGGCGAGAGAGATGCAAGAGAGAGGTTGGAAACCAAAGTGGTTTAGAAAAGAGAAAGG 2174
Query 1377 AAGTGAGACTTATAGATACATTGGAGGTTATTGGGAGGCTCGAGATTCTGGTCGCTGGGA 1436
||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||
Sbjct 2175 AAGTGAGACTTATAGATACGTTGGAGGTTATTGGGAAGCTCGAGATTCTGGTCGTTGGGA 2234
Query 1437 TGATTGTCCTGACATCTTTGGTCAAGTTCAC 1467
|||||||||||||||||||||||||||||||
Sbjct 2235 TGATTGTCCTGACATCTTTGGTCAAGTTCAC 2265
> Ahg489733 jgi|Araly1|489733|fgenesh2_kg.6__2867__AT4G08180.3
Length=2999
Score = 974 bits (527), Expect = 0.0
Identities = 980/1195 (82%), Gaps = 45/1195 (4%)
Strand=Plus/Plus
Query 260 ATGGCTTTGAGTCAGATGATGACGTTGATCCTTCTATCAAGACTATTGGATTTAACTATC 319
||||||| |||||||| ||||| |||||||||| |||||| ||||||||| |||||||
Sbjct 1450 ATGGCTTCGAGTCAGAAGATGATATTGATCCTTCCATCAAGTCTATTGGATGCAACTATC 1509
Query 320 CTCATGTCAATA-GACGAAATAAATTACCTGATCCGGTTGAAAAAGAGAAAAGTGTTAGC 378
||| ||||| | || | || || ||||||||||||||||||||||||||||||||||||
Sbjct 1510 CTCGCGTCAAAAGGA-GGAAGAATTTACCTGATCCGGTTGAAAAAGAGAAAAGTGTTAGC 1568
Query 379 CTTTGGTCAATGATCAAAGACAACATTGGCAAGGATCTTACTAAAGTTTGTCTTCCTGTT 438
||||||||||||||||||||||| || ||||||||||| || ||||| ||||||||||||
Sbjct 1569 CTTTGGTCAATGATCAAAGACAATATAGGCAAGGATCTAACAAAAGTCTGTCTTCCTGTT 1628
Query 439 TACTTCAATGAGCCACTATCCTCTCTACAAAAATGCTTTGAAGATTTGGAGTATTCATAT 498
|||||||| ||||||||||| ||| |||| ||||| ||||| |||||||| ||||||||
Sbjct 1629 TACTTCAACGAGCCACTATCTTCTTTACAGAAATGTTTTGAGGATTTGGAATATTCATAC 1688
Query 499 CTTCTTGATCAAGC-TTCTGAATGGGGAAAAAGGGGCAATAACCTTATGAGGATTTTGAA 557
|||||||| | || || ||||| || |||||||| |||| ||| ||||||||| | ||
Sbjct 1689 CTTCTTGACCGTGCATT-TGAATATGGCAAAAGGGGAAATAGCCTCATGAGGATTCTCAA 1747
Query 558 TGTAGCTGCATTTGCTGTATCTGGTTATGCATCAACTAAAGGAAGAATTTGCAAACCCTT 617
||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||| ||
Sbjct 1748 TGTAGCTGCTTTTGCTGTATCTGGGTATGCATCAACCGAAGGAAGAATCTGCAAACCTTT 1807
Query 618 TAATCCAATGTTAGGGGAAACATACGAGGCTGATTATCCCGATAAAGGCCTTCGATTTTT 677
||||||| ||||||| |||||||||||||| || ||||| || |||||||||||||||||
Sbjct 1808 TAATCCATTGTTAGGTGAAACATACGAGGCAGACTATCCAGACAAAGGCCTTCGATTTTT 1867
Query 678 CTCGGAAAAGGTAAGTCATCATCCTATGATTGTGGCATGTCATTGTGATGGCACCGGATG 737
|| |||||||| ||||||||||||||| |||| ||||| |||||||||||||| |||||
Sbjct 1868 TTCAGAAAAGGTCAGTCATCATCCTATGGTTGTCGCATGCCATTGTGATGGCACGGGATG 1927
Query 738 GAAATTTTGGGGAGATAGCAAT-TTAAAAAGCAAATTTTGGGGTCGATCAATTCAGCTCG 796
|||||| |||||||| |||||| ||| | ||||||| ||||||||||| |||||||| |
Sbjct 1928 GAAATTCTGGGGAGACAGCAATCTTAGGA-GCAAATTCTGGGGTCGATCTATTCAGCTTG 1986
Query 797 ATCCTATCGGTTTGTTGACTTTACAATTTGATGATGGTGAAATTGTGCAATGGAGTAAGG 856
||||| | ||| | |||||||| |||||||||||||| ||||| | || ||||||||||
Sbjct 1987 ATCCTGTTGGTGTATTGACTTTGCAATTTGATGATGGAGAAATCCTTCAGTGGAGTAAGG 2046
Query 857 TGACTACATCAATATACAATCTCATACTTGGTAAATTGTATTGTGATCATTATGGGACTA 916
||||||||||||||||||||||||||||||||||| |||| |||||||| || || || |
Sbjct 2047 TGACTACATCAATATACAATCTCATACTTGGTAAACTGTACTGTGATCACTACGGTACAA 2106
Query 917 TGC-TGATTGAAGGTAACGGTGAATACTCATGTAAACTTAAATTCAAGAAACAGTCGATG 975
||| | ||||| || | | |||||||||||||||||||||||||||| | ||||| ||
Sbjct 2107 TGCGT-ATTGAGGGCAGTGCTGAATACTCATGTAAACTTAAATTCAAGGAGCAGTCCATC 2165
Query 976 ATGGATAGAAATCCGCATCAAGTTCAAGGTATAGTAGAAGACAAGAATGGAAAAACAGTG 1035
|| || ||||||| ||||| ||||| |||||||| ||||||||| ||| || ||||||
Sbjct 2166 ATAGACCGAAATCCTCATCAGGTTCATGGTATAGTTCAAGACAAGAGTGGGAAGACAGTG 2225
Query 1036 GCTAA-GTTGTTTGGAAAATGGGATGAGAGTATGTACTATGTGATGG-TCAAT---C--- 1087
|| || | ||||||| |||||||||||||| ||| ||| ||||| || | | | |
Sbjct 2226 GC-AACGATGTTTGGGAAATGGGATGAGAGCATGCACTTTGTGACGGGTGATTGTTCTGG 2284
Query 1088 -AAGG--AAAG-GAG--A-G-T--G--A--ATCTCATCTT-TTGTGGAAACGAAACAAAC 1132
|||| ||| ||| | | | | | | |||| ||| || |||||||| | |||||
Sbjct 2285 GAAGGGGAAACAGAGTGAAGCTATGTCAGGAGCTCAACTTCTT-TGGAAACGGAGCAAAC 2343
Query 1133 CTC-TCGAAAACCCTACAAAGTACAATCTTACACGGTTTGGGATCACATTAAACGAGCTC 1191
||| | |||| | | |||||||| ||||| ||||| |||| ||||| || || |||||
Sbjct 2344 CTCCTGGAAA-CGCAACAAAGTATAATCTAACACGTTTTGCAATCACGTTGAATGAGCTT 2402
Query 1192 ACGCCTGAT-TTAAAGGAAATG--TTGCCACCAACAGATTCCAGACTTAGACCGGACCAA 1248
||||||| |||| ||| | | || |||||||| ||||| || || ||||||||||
Sbjct 2403 ACGCCTGGGCTTAA-GGAGA-GCCTT-CCACCAACGGATTCAAGGCTGCGACCGGACCAG 2459
Query 1249 AGGTATTTGGAAAAAGGAGAGTTTGAAATGGgaaacagagagaagttgaggttagaacaa 1308
|||||| | || || |||||||||||||||| |||| |||||||||| || | |||||
Sbjct 2460 AGGTATCTCGAGAACGGAGAGTTTGAAATGGCCAACACAGAGAAGTTGCGGCTGGAACAG 2519
Query 1309 aggcaaagacaggcgagaga-gaaacaagagagaggCTGGAAACCAACGTGGTTTAGTAA 1367
| ||| | ||||| || || || || |||||||| ||||| || | |||||| | | |
Sbjct 2520 CGACAACGTCAGGCTAG-GAAGATGCAGGAGAGAGGATGGAAGCCGAGGTGGTTCA-TGA 2577
Query 1368 AG-AGAAAGGAAGTGAGACTTATAGATACATTGGAGGTTATTGGGAGGCTCGAGA 1421
|| ||||||| || ||| | || |||||| |||||||| ||||| || |||||
Sbjct 2578 AGGAGAAAGGTAGCGAGTCATACCGATACAAAGGAGGTTACTGGGAAGCCCGAGA 2632
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55002313780
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5