BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G31780.1 Length=1603 Score E Sequences producing significant alignments: (Bits) Value Ahg320921 jgi|Araly1|320921|fgenesh1_pm.C_scaffold_4000978 1295 0.0 Ahg933725 jgi|Araly1|933725|scaffold_401713.1 1256 0.0 Ahg932865 jgi|Araly1|932865|scaffold_400853.1 279 3e-74 Ahg470601 jgi|Araly1|470601|fgenesh2_kg.1__555__AT1G05890.1 191 2e-47 > Ahg320921 jgi|Araly1|320921|fgenesh1_pm.C_scaffold_4000978 Length=1587 Score = 1295 bits (701), Expect = 0.0 Identities = 1250/1505 (83%), Gaps = 78/1505 (5%) Strand=Plus/Plus Query 73 GACATCATCGATATCGAATCA--GGA-GAGGAGGAT-TTGTACAGCGATGGTGGTAACG- 127 |||||||||||||| |||||| ||| ||||||||| | ||||||||||||||||||| Sbjct 19 GACATCATCGATATGGAATCAGGGGAGGAGGAGGATCAT-TACAGCGATGGTGGTAACGA 77 Query 128 -TAT-CCGATGACTACAACC-C-TGTGGACGACACAATTAGTCGATCTGAGAAAAGTTAC 183 ||| ||||| ||||| || | || || ||| |||||| || |||||||||||||||| Sbjct 78 ATATGCCGATCACTAC--CCTCTTGAAGAAGACGCAATTATTCCATCTGAGAAAAGTTAC 135 Query 184 GTTGTTGTTAAGGAAGAAGACATTCTTAAGCTTCAAAGAGACGATATCGAACAAGTTTCG 243 || ||| | |||||||||||||||| |||| |||||||||||||||||||| |||||| Sbjct 136 GTAGTTCTCAAGGAAGAAGACATTCACAAGCATCAAAGAGACGATATCGAACGAGTTTCC 195 Query 244 ACGGTTCTCTCTGTAAGCCAAGTGGAATCGATTGTTCTGCTTCTTCACTATCATTGGTGT 303 |||| ||||||| |||||||||| ||| ||| ||||| |||||||| ||||||||| || Sbjct 196 ACGGCTCTCTCTCTAAGCCAAGTCGAAGCGACCGTTCTTCTTCTTCATTATCATTGGAGT 255 Query 304 GTTAGTAA-ACTCGAAGATGAATGGTTTACGGACGAAGAGAGAATCCGTAAAACCGTTGG 362 |||||||| | || | || ||||||||||||||||||||||||||||||||||| ||||| Sbjct 256 GTTAGTAAGA-TCTACGAGGAATGGTTTACGGACGAAGAGAGAATCCGTAAAACAGTTGG 314 Query 363 TATATTAAAGGAGCCTGTCGTTGATGTTAATGGTACAGAAGTGGATATTCAATGTGGAAT 422 || | ||||||||||||||||| |||||||||| |||||||||||| ||||||||||| Sbjct 315 AATCCTGAAGGAGCCTGTCGTTGACGTTAATGGTAGAGAAGTGGATATCCAATGTGGAAT 374 Query 423 TTGCTTTGAATCATACACT-CGAAAGGAAATTGCTAGGGTTTCTTGTGGTCATCCTTATT 481 ||||||||||||||||||| | | | |||||||||| ||||||||||||||||||||||| Sbjct 375 TTGCTTTGAATCATACACTTC-AGATGAAATTGCTACGGTTTCTTGTGGTCATCCTTATT 433 Query 482 GCAAGACCTGCTGGACTGGTTACATCACTACGAA-AATCGAAGA-CGGTCCGGGATGTTT 539 ||||||| |||||||||||||||||| |||| || |||| || | |||||| |||||||| Sbjct 434 GCAAGACTTGCTGGACTGGTTACATCTCTAC-AACAATC-AACAACGGTCCAGGATGTTT 491 Query 540 AAGGGTTAAATGTCCCGAACCTTCTTGTTACGCTGTTGTTGGTCAAGACATGATCGATGA 599 ||||||||||||||| || |||||||||| ||||| ||||||||||| ||||||||| | Sbjct 492 AAGGGTTAAATGTCCTGAGCCTTCTTGTTCCGCTGCGGTTGGTCAAGATATGATCGATAA 551 Query 600 GGTTACTGAGAA-GAAAGATAAGGACAAGTATTATAGATATTTTCTTAGGTCTTATGTCG 658 ||||| | | || ||| |||||||| ||||| |||||||||||||||||||||||||| | Sbjct 552 GGTTAGTAATAAAGAA-GATAAGGAGAAGTACTATAGATATTTTCTTAGGTCTTATGTGG 610 Query 659 AAGACG--GG--A-AGAAGATGAAATGGTGTCCATCACCGGGATGCGAATACGCGGTTGA 713 |||| | || | |||| | |||||||||||||||||||||||||||| ||| | || Sbjct 611 AAGAAGTTGGGGAGAGAAC-T-AAATGGTGTCCATCACCGGGATGCGAATGTGCGATAGA 668 Query 714 ATTTGGTGT----A----AA-TGGAAGTAGTAGTTACGATGTTTCTTGTTTGTGTTCGTA 764 ||| |||| | || ||||||||||||||| ||| ||| ||||||||||||| | Sbjct 669 TTTTAGTGTTGGGAGTGGAAGTGGAAGTAGTAGTTATGATATTTATTGTTTGTGTTCGCA 728 Query 765 TAAG-TTTTGCTGGAATTGCTG-TGAAGACGCTCACTCTCCTGTGGATTGTGAAACAGTG 822 || | |||||||||||||| | |||||| |||||| ||||||||||||||| || || Sbjct 729 TA-GCTTTTGCTGGAATTG-TACTGAAGATGCTCACAGTCCTGTGGATTGTGACACGGTC 786 Query 823 TCAAAGTGGTTACTAAAGAACAAGGATGAGTCGGAGAACATGAATTGGATACTTGCTAAG 882 ||||| ||| || | |||||| |||||||||| ||||||| ||||||||| ||||| || Sbjct 787 TCAAAATGGATATTCAAGAACCAGGATGAGTCCGAGAACAAGAATTGGATGCTTGCGAAT 846 Query 883 ACAAAGCCTTGTCCTAAATGCAAGCGTCCTATTGAGAAGAAC-ACTGGATGTAACCATAT 941 |||||||||||||||||||||| |||||||| ||||||||| | ||||||||||| ||| Sbjct 847 TCAAAGCCTTGTCCTAAATGCAAACGTCCTATCGAGAAGAACGA-TGGATGTAACCGTAT 905 Query 942 GTCATGCTCAGCTCCATGTAGACATTATTTTTGTTGGGCATGCCTTCAACCA--TTGA-G 998 | ||||||||| ||||||||||||| | ||||||||| || ||| ||||| || | | Sbjct 906 GACATGCTCAGATCCATGTAGACATCAGTTTTGTTGGATTTGTCTTGAACCACATT-ATG 964 Query 999 CGATCACAAG-GCTTGCAACGCGTT--TAAAGCAGACAATGAGGATGAAACTAAGAGAAA 1055 | |||| | ||||||||| ||| | || ||| | | | ||||| |||||||| Sbjct 965 -G-TCACG-GTGCTTGCAACAAGTTCGTTGAGGAGA-A--G-GC-TGAAAGTAAGAGAAC 1016 Query 1056 AAGGGCTAAAGA-TGCGATCGATAGATACACGCATTTTTATGA-AAGATGGGCATTCAAT 1113 | | || ||| || ||| | ||||||||||||| |||| | |||||||||| |||| Sbjct 1017 ATTG-CTTCAGAATGAAATCAAAAGATACACGCATTATTAT-ATAAGATGGGCAAACAAT 1074 Query 1114 CAATCCTCGAGGCTTAAAG-CTATGAGTGATTTGGAGAAATGGCAATCGGTGGAGCTTAA 1172 ||||| |||||||| |||| ||||||||||| ||||||| | |||||||||| ||||||| Sbjct 1075 CAATCGTCGAGGCT-AAAGGCTATGAGTGATCTGGAGAAGTTGCAATCGGTGCAGCTTAA 1133 Query 1173 GCAGCTTAGTGACATTCAGAGCACACCAGAAACTCAGCTC-AGTTTCACCGTAGATGCAT 1231 |||||||||||| | || |||| |||||||||| | ||| | || |||| ||||||||| Sbjct 1134 GCAGCTTAGTGATAAACAAAGCAAACCAGAAACTGATCTCCAATT-CACCTTAGATGCAT 1192 Query 1232 GGCTTCAGATCATCGAGTGTAGGAGGGTCTTGAAATGGACCTATGCATATGGATACTACA 1291 || |||||||| |||| |||||||| |||||||||||||| |||||||||||||||||| Sbjct 1193 GGATTCAGATCCTCGAATGTAGGAGAGTCTTGAAATGGACATATGCATATGGATACTACC 1252 Query 1292 TACTT-AGTCAAG--A-GCG-CAACAAG-CGAGTATTTGCAAGCTGAGGCAGAAA-ATGG 1344 | | | | || | | ||| ||| |||||||||||||| ||||| |||| | | Sbjct 1253 TTCATGA-TCTCGCCAAGCGACAATTTTTCGAGTATTTGCAAGGGGAGGCTGAAACAAG- 1310 Query 1345 TTTGGAGAGACTTCATCATTGTGCAGAGGAGGAGTTGAAACAGTTTATCGGGAAAATTGA 1404 ||| ||||| |||||||||||||||||| | |||||||||||||||||| |||| ||| Sbjct 1311 TTTAGAGAGGCTTCATCATTGTGCAGAGAATGAGTTGAAACAGTTTATCAATAAAACTGA 1370 Query 1405 AGACCCATCAAAAAATTTCGGTGAGCTCCG-AGCGAAATTAATTGATTTGACTAAAGCAA 1463 ||| ||||| ||| |||| || |||| | |||||||| | |||||||||| | || Sbjct 1371 AGATCCATCCGAAACTTTCTCTGCTTTCCGGAT-GAAATTAACTAATTTGACTAATGTAA 1429 Query 1464 CTAAAACCTACTTCGAAAATCTGGTGAAAGCTTTGGAGAACGGTCTTGTTGACGTGGCAT 1523 ||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||| Sbjct 1430 CTAAAACCTACTTCGAAAATCTGGTGAAAGCTTTGGAAAATGGTCTTGCTGATGTGGCAT 1489 Query 1524 ATAAT 1528 ||||| Sbjct 1490 ATAAT 1494 > Ahg933725 jgi|Araly1|933725|scaffold_401713.1 Length=1555 Score = 1256 bits (680), Expect = 0.0 Identities = 872/962 (91%), Gaps = 24/962 (2%) Strand=Plus/Plus Query 616 GATAAGGACAAGTATTATAGATATTTTCTTAGGTCTTATGTCGAAGACGGGAAGAAGATG 675 |||||||| || ||| |||||||| |||||||||||||||||||||| ||||||||||| Sbjct 513 GATAAGGAGAAATATCATAGATATCTTCTTAGGTCTTATGTCGAAGAAGGGAAGAAGATT 572 Query 676 AAATGGTGTCCATCACCGGGATGCGAATACGCGGTTGAATTTGGTGTAAATGGAAGTAGT 735 ||||||||||||||||||||||||||||| || |||||||||||| || |||||||||| Sbjct 573 AAATGGTGTCCATCACCGGGATGCGAATATGCTATTGAATTTGGTGGAAGTGGAAGTAGT 632 Query 736 AGTTACGATGTTTCTTGTTTGTGTTCGTATAAGTTTTGCTGGAATTGCTGTGAAGACGCT 795 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 633 AGTTACGATGTTTCTTGTTTGTGTTCGTATAGGTTCTGCTGGAATTGCTGTGAAGACGCT 692 Query 796 CACT-CTCCTGTGGATTGTGAAACAGTGTCAAAGTGGTTACTAAAGAACAAGGATGAGTC 854 || | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 693 CA-TACTCCTGTGGATTGTGAAACGGTGTCAAAGTGGTTACTAAAGAACAAGGATGAGTC 751 Query 855 GGAGAACATGAATTGGATACTTGCTAAGACAAAGCCTTGTCCTAAATGCAAGCGTCCTAT 914 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 752 CGAGAACACGAATTGGATACTTGCTAAGACAAAGCCTTGTCCTAAATGCAAGCGTCCTAT 811 Query 915 TGAGAAGAACACTGGATGTAACCATATGTCATGCTCAGCTCCATGTAGACATTATTTTTG 974 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 812 TGAGAAGAACAATGGATGTAACCATATGTCATGCTCAGCTCCGTGTAGACATTATTTTTG 871 Query 975 TTGGGCATGCCTTCAACCATTGAGC-GATCACAAGGCTTGCAACGCGTTTAAAGCAGACA 1033 |||||| |||||||||||||||||| | |||| ||||||||||||||| ||||| ||||| Sbjct 872 TTGGGCTTGCCTTCAACCATTGAGCAG-TCACCAGGCTTGCAACGCGTATAAAGAAGACA 930 Query 1034 ATGAGGATGAAACTAAGAGAAAAAGGGCTAAAGATGCGATCGATAGATACACGCATTTTT 1093 |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 931 ATGAGGTTGAAACTAAGAGAAAAAGGGCTAAAGATGCGATCGATAGATACACACATTACT 990 Query 1094 ATGAAAGATGGGCATTCAATCAATCCTCGAGGCTTAAAG-CTATGAGTGATTTGGAGAAA 1152 ||||||||||||||||||||||||| |||||||| |||| || | |||||| | |||||| Sbjct 991 ATGAAAGATGGGCATTCAATCAATCGTCGAGGCT-AAAGGCTGTAAGTGATCTAGAGAAA 1049 Query 1153 TGGCAATCGGTGGAGCTTAAGCAGCTTAGTGACATTCAGAGCACACCAGAAACTCAGCT- 1211 ||||| || ||| |||||||| |||||||||||| ||||||| ||||||||| |||||| Sbjct 1050 TGGCAGTCAGTGCAGCTTAAGGAGCTTAGTGACAATCAGAGCTCACCAGAAAGTCAGCTT 1109 Query 1212 CAGTTTCACCGTAGATGCATGGCTTCAGATCATCGAGTGTAGGAGGGTCTTGAAATGGAC 1271 | |||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| Sbjct 1110 C-GTTTCACCGTAGATGCGTGGCTTCAGATCATTGAATGTAGGAGGGTCTTGAAATGGAC 1168 Query 1272 CTATGCATATGGATACTACATACTTAGTCAAGAGCGCAACAAGCGAG--T------A-T- 1321 ||||||||||||||||||| |||||| ||||||||| ||||||||| | | | Sbjct 1169 CTATGCATATGGATACTACCTACTTACTCAAGAGCGTGACAAGCGAGAATTTTTTGAGTA 1228 Query 1322 TT-GCAAGCTGAGGCAGAAAATGGTTTGGAGAGACTTCATCATTGTGCAGAGGAGGAGTT 1380 || ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1229 TTTGCAAGGGGAGGCAGAAACTGGTTTGGAGAGACTTCATCATTGTGCAGAGGAGGAGTT 1288 Query 1381 GAAACAGTTTATCGGGAAAATTGAAGACCCATCAAAAAATTTCGGTGAGCTCCGAGCGAA 1440 ||||||||||||||| |||| || |||||||||||||||||||||||||||||| | || Sbjct 1289 GAAACAGTTTATCGGTAAAACTGTAGACCCATCAAAAAATTTCGGTGAGCTCCG-GATAA 1347 Query 1441 A-TTAATTGATTTGACTAAAGCAACTAAAACCTACTTCGAAAATCTGGTGAAAGCTTTGG 1499 | ||||||||||||||| || ||| | |||||||||||||||||||||||||||||||| Sbjct 1348 AATTAATTGATTTGACTGTAGTAACCAGAACCTACTTCGAAAATCTGGTGAAAGCTTTGG 1407 Query 1500 AGAACGGTCTTGTTGACGTGGCATATAATGAGA-G--CCAGTCAATAGAAGAACCTGAAT 1556 | || ||||||| ||| || ||||||||||||| | ||| |||| | |||||||||||| Sbjct 1408 ATAATGGTCTTGCTGATGTTGCATATAATGAGAAGAGCCAATCAACACAAGAACCTGAAT 1467 Query 1557 CT 1558 || Sbjct 1468 CT 1469 Score = 407 bits (220), Expect = 1e-112 Identities = 405/487 (83%), Gaps = 42/487 (9%) Strand=Plus/Plus Query 93 AGGA-GAGGAGGAT-TTGTACAGCGATGGTGGTA-ACGTATCCGATGACTACAACCCTGT 149 |||| ||||||||| || |||| ||||||||||| | | ||||||||||| ||| | | Sbjct 64 AGGAGGAGGAGGATCTT-TACATCGATGGTGGTATA-GAATCCGATGACT---ACCATTT 118 Query 150 GGACGACACAATTAGTCGATCTGAGAAAAGTTACGTTGTTGTTAAGGAAGAAGACATTCT 209 || |||||||||||||||||||||||||||||||| || | ||||||||||| ||||| Sbjct 119 TGAAGACACAATTAGTCGATCTGAGAAAAGTTACGTAATTCTCAAGGAAGAAGATATTCT 178 Query 210 TAAGCTTCAAAGAGACGATATCGAACAAGTTTCGACGGTTCTCTCTGTAAGCCAAGTGGA 269 |||| |||||||||||||||||||| |||||| |||| ||||||| ||||||| || || Sbjct 179 CAAGCATCAAAGAGACGATATCGAACGAGTTTCCACGGCTCTCTCTCTAAGCCACGTCGA 238 Query 270 ATCGATTGTTCTGCTTCTTCACTATCATTGGTGTGTTAGTAA-ACTCGAAGATGAATGGT 328 | ||| ||||| |||||||||| ||||||| ||| |||||| | ||||||||||||||| Sbjct 239 AGCGACCGTTCTTCTTCTTCACTTTCATTGGAGTGCTAGTAAGA-TCGAAGATGAATGGT 297 Query 329 TTACGGACGAAGAGAGAATCCGTAAAACCGTTGGTATATTAAAGGAGCCTGTCGTTGATG 388 ||||||||| | |||| | | || || | |||| | | ||||| | Sbjct 298 TTACGGACG-A-AGAG-A---G--AATCC----G-----TAAA--A--C---CGTTG--G 331 Query 389 TTAATGGTACAGAAGTGGATATTCAATGTGGAATTTGCTTTGAATCATACACTCGA-AAG 447 ||| || ||||||| |||| || |||||||||||||||||||||||||||||| ||| Sbjct 332 --AAT--TAGAGAAGTGAATATCCATTGTGGAATTTGCTTTGAATCATACACTCGAGAAG 387 Query 448 GAAATTGCTAGGGTTTCTTGTGGTCATCCTTATTGCAAGACCTGCTGGACTGGTTACATC 507 ||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct 388 -AAATTGCAAGGGTTTCTTGTGGTCATCCTTATTGCAATACTTGTTGGACTGGTTACATC 446 Query 508 ACTACGAAAATCGAAGACGGTCCGGGATGTTTAAGGGTTAAATGTCCCGAACCTTCTTGT 567 ||||| ||||||||||||||||| ||||||||||||||||||||||| || ||||||||| Sbjct 447 ACTACAAAAATCGAAGACGGTCCAGGATGTTTAAGGGTTAAATGTCCTGAGCCTTCTTGT 506 Query 568 TACGCTG 574 | ||||| Sbjct 507 TCCGCTG 513 > Ahg932865 jgi|Araly1|932865|scaffold_400853.1 Length=378 Score = 279 bits (151), Expect = 3e-74 Identities = 268/324 (83%), Gaps = 10/324 (3%) Strand=Plus/Plus Query 193 AAGGAAGAAGACATTC--T--TAAGCTTCAAAGAGACGATATCGAACAAGTTTCGACGGT 248 ||||||||||| |||| | ||||| ||||| | |||||||||||| |||||| ||||| Sbjct 52 AAGGAAGAAGATATTCGATCGTAAGCATCAAATAAACGATATCGAACGAGTTTCCACGGT 111 Query 249 TCTCTCTGTAAGCCAAGTGGAA-TCGATTGTTCTGCTTCTTCACTATCATTGGTGTGTTA 307 |||||| ||| |||| ||| | |||| ||||||||||||| ||||||||| |||||| Sbjct 112 TCTCTCCATAAATCAAGACGAAGT-GATTATTCTGCTTCTTCATTATCATTGGAGTGTTA 170 Query 308 GTAAACTCGAAGATGAA-TGGTTTACGGACGAAGAGAGAATCCGTAAAACCGTTGGTATA 366 | ||| |||||||| || | ||| ||||||||||||||||||||||||||||||||||| Sbjct 171 GCAAATTCGAAGAT-AATTTTTTTTCGGACGAAGAGAGAATCCGTAAAACCGTTGGTATA 229 Query 367 TTAAAGGAGCCTGTCGTTGATGTTAATGGTACAGAAGTGGATATTCAATGTGGAATTTGC 426 | ||| | | ||| |||||| |||||| || ||||| |||| || |||| ||||||| Sbjct 230 CTGAAGAATCTTGTAGTTGATTTTAATGATAGAGAAGAAAATATCCAGTGTGAAATTTGC 289 Query 427 TTTGAATCATACACTCGAAAGGAA-ATTGCTAGGGTTTCTTGTGGTCATCCTTATTGCAA 485 |||||||||||||||||| || || || | | |||||||||||||||||||||||||| Sbjct 290 TTTGAATCATACACTCGAGAG-AACATCACAACAGTTTCTTGTGGTCATCCTTATTGCAA 348 Query 486 GACCTGCTGGACTGGTTACATCAC 509 || |||| ||| |||||||||| Sbjct 349 AACTTGCTAGACAAGTTACATCAC 372 > Ahg470601 jgi|Araly1|470601|fgenesh2_kg.1__555__AT1G05890.1 Length=2143 Score = 191 bits (103), Expect = 2e-47 Identities = 384/514 (75%), Gaps = 41/514 (8%) Strand=Plus/Plus Query 1034 ATGAGGATGAAACTAAGAGAAAAAGGGCTAAAGATGCGATCGATAGATACACGCATTTTT 1093 |||||| ||||| | | || | | ||| ||| || || | || |||||||| |||| | Sbjct 1225 ATGAGGCTGAAAGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACT 1284 Query 1094 ATGAAAGATGGGCATTCAATCAA-TCCTCGAGGCTTAAAGCTATGAGTGATTTGGAG-AA 1151 ||||| | |||||| ||||||| | ||||||| ||||||||| | ||| || || || Sbjct 1285 ATGAACGCTGGGCAAGCAATCAAGT-GTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAA 1343 Query 1152 ATGGCAATCGGTGGAGCTTAAGCAGCTTAGTGACATTCAGAGCACACCAGAAACTCAGCT 1211 || |||||| | | ||||| | ||||||||||||| ||| ||||||||||| ||||||| Sbjct 1344 AT-GCAATCAGAGAAGCTTGGGAAGCTTAGTGACATACAGTGCACACCAGAATCTCAGCT 1402 Query 1212 C-AGTTTCACCGTAGATGCATGGCTTCAGATCATCGAGTGTAGGA-GGGT-CTTGAAATG 1268 | ||||| | || | | || ||||| |||||||| || || | || |||| ||| ||||| Sbjct 1403 CAAGTTT-ATCGCACAAGCTTGGCTCCAGATCATTGAATGCA-GACGGGTACTT-AAATG 1459 Query 1269 GACCTATGCATATGGATACTA-CATACTTAG-TCAAG---AGCG-CAA-CAAGCGAGTAT 1321 ||| ||||||||||||||||| | ||| || ||| | |||| ||| |||||| Sbjct 1460 GACATATGCATATGGATACTATC-TAC-CAGATCATGCTAAGCGACAATTTTTTGAGTAT 1517 Query 1322 TTGCAAGCTGAGGCAGA-AAATGGTTTGGAGAGACTTCATC-ATTGTGCAGAGGAGGAGT 1379 ||||||| ||||| || | ||||||||||| || || | | || | |||| |||| | Sbjct 1518 TTGCAAGGGGAGGCTGAGTCA-GGTTTGGAGAGGCTCCA-CAAATGCGTAGAGAAGGA-T 1574 Query 1380 TGAAACAGT-TTATCGGGAAAAT--TGAAGACCCATCA-AAAAATTTCGGTGAGCTCC-G 1434 | | | || || || ||| | ||| | ||| ||| | || ||| | | ||| | Sbjct 1575 TTAGA-GGTGTT-TC---AAATTGCTGACGGCCCTTCAGATGAA-TTCAATCATTTCCGG 1628 Query 1435 AGCGAAATTAATTGATTTGACTAAAGC--AACTAAAACCTACTTCGAAAATCTGGTGAAA 1492 | | ||||||| || ||| || ||| ||| ||||||||||||||||||||||||||| Sbjct 1629 A-CAAAATTAACTGGTTTAAC--CAGCATAACAAAAACCTACTTCGAAAATCTGGTGAAA 1685 Query 1493 GCTTTGGAGAACGGTCTTGTTGACGTGGCATATA 1526 ||| ||||||| ||||||| ||| |||| ||||| Sbjct 1686 GCTCTGGAGAATGGTCTTGCTGATGTGG-ATATA 1718 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60068316365 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5