BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G31830.2
Length=3655
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482106 jgi|Araly1|482106|fgenesh2_kg.4__1166__AT2G31830.1 5657 0.0
Ahg470566 jgi|Araly1|470566|fgenesh2_kg.1__520__AT1G05630.1 1831 0.0
> Ahg482106 jgi|Araly1|482106|fgenesh2_kg.4__1166__AT2G31830.1
Length=3636
Score = 5657 bits (3063), Expect = 0.0
Identities = 3331/3464 (96%), Gaps = 4/3464 (0%)
Strand=Plus/Plus
Query 1 CTCATTTCCCCTTCATGGTTGGTTTTGTTCCGATTTCCAAATTTCTTCATTTGGCAAATT 60
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 CTCATTTCCTCTTCATGGTTGGTTTCGTTCCGATTTCCAAATTTCTTCATTTGGCAAATA 60
Query 61 CTTTTGATCTTCTTCCATGGATTCGGTAATTATTGAACCAGATGAGCGGGAGGCGTTGGC 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 61 CTTTTGATCTTCTTCCATGGATTCGGTAATTATTGAAGCAGATGAGCGGGAGGCGTTGGC 120
Query 121 ATCGCTTGTCCCTGCTCATCCTCTTCCTCCCCGTAAGACACATTCCTATGTCGAGCAATG 180
|||||| | ||||||||||||||| || ||||||||||| |||||||||||||||||||
Sbjct 121 ATCGCTCGCCCCTGCTCATCCTCTGCCGCCCCGTAAGACGCATTCCTATGTCGAGCAATA 180
Query 181 CGAACAGAAGCCGCACCATCCAATCCGCAAATATAGCCTTGATGAGGGCTCTAGATCCGT 240
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 181 CGAACAGAAGCCTCACCATCCAATCCGCAAATATAGCCTTGATGAGGGATCTAGATCCGT 240
Query 241 GACATCGGATTCTGAAGCTGTTTATTTTGATTCCTCTGATGGTGAGTTCTCTACCGAAGG 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GACATCGGATTCCGAAGCTGTTTATTTTGATTCCTCTGATGGTGAGTTCTCTACCGAAGG 300
Query 301 AGTAGCCATCGTCGATGGAAGAACCAGTGGTGAAAGAGGCAACGGGGAGGAATGTGGTTT 360
||||| |||| || ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 301 AGTAGTCATCATCAATGGAAGAACCAGTGGTGAAAGAGGCAACGGGGAGGATTACGGTTT 360
Query 361 TGTCACGCCTCCATCGAAACCAGCATCACAGGGCGGTGGAAATGACGGCGGCAGGGAGGA 420
||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||
Sbjct 361 TGTCACGCCTCCATCGAAACCAGCATCACAGCACGGTGAAAATGACGGCGGCGGGGAGGA 420
Query 421 TGATATCGAGTCCCTTCCAGAATTCATTGGCGCAGGAGGTGGCCTTGACGTATTCAAGGT 480
||||||||||||||||||||||||||| || |||||||||||| |||||||||| |||||
Sbjct 421 TGATATCGAGTCCCTTCCAGAATTCATCGGTGCAGGAGGTGGCGTTGACGTATTTAAGGT 480
Query 481 GCCGGTGCGTGCCGCGGTGAATCCCGGACGGCCTCCATGTCTCGAGCTCCGACCGCATCC 540
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 481 GCCGGTGCGTGCCGCCGTGAATCCCGGACGGCCGCCATGTCTCGAGCTCCGACCGCATCC 540
Query 541 ATTAAGAGAGACACAGACGGGAAAGTTTCTGAGAAACATTGCT-TGCACAGAAAGTCAGC 599
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 541 GTTAAGAGAGACACAGACGGGAAAGTTTCTGAGAAACATTG-TGTGCACAGAAAGTCAGC 599
Query 600 TATGGGCGGGACAAGAGAACGGCGTGAGGTTCTGGAACTTGGAGGAAGCATACGAGGTCG 659
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 600 TATGGGCGGGACAAGAGAATGGCGTGAGGTTCTGGAACTTGGAGGAAGCATACGAGGTTG 659
Query 660 GTTGTGGCCTTGGCGGGCAGGTACGGCGAGGGGATGAGGATACAGCCCCGTTTCATGAAT 719
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 660 GTTGTGGCCTTGGCGGGCAGGTACGGCGAGGAGATGAGGATACAGCGCCGTTTCATGAAT 719
Query 720 CTGTTCCGACCTCGCCTGCCTTATGTTT-ATTGGTTGACCACGGCAATAGGCTTGTGTGG 778
|||||||||||||||||||||| ||||| | || ||||||||||||||||||||||||||
Sbjct 720 CTGTTCCGACCTCGCCTGCCTTGTGTTTGA-TGATTGACCACGGCAATAGGCTTGTGTGG 778
Query 779 ACCGGCCACAAGGATGGCAAAATTAGGGCCTGGAAAATGAATCAGCCCAATACGACTACT 838
|| |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||
Sbjct 779 ACTGGCCACAAGGATGGCAAAATCAGGGCCTGGAAAATGAATCAGCCGATTACGACTACT 838
Query 839 GCAGATGATTCAAAGCCTTTCAAGGAACGACTCTCATGGCAAGCTCATCGTGGTCCTGTG 898
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 839 GCGGATGATTCAAAGCCTTTCAAGGAACGACTCTCGTGGCAAGCTCATCGTGGTCCTGTG 898
Query 899 AATTATATTGTCATAAGCTCATATGGTGATATGTGGTCATGTTCTGATGGCGGTGTGATA 958
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 AATTATATCGTCATAAGCTCATATGGTGATATGTGGTCATGTTCTGATGGCGGTGTGATA 958
Query 959 AAGATATGGACTTTGGATTCTTTAGAGAAGTCTCTTGTGCTAAAACTGGAGGAGAAGCAT 1018
|| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||
Sbjct 959 AAAATATGGACTTTGGATTCTTTAGAGAAGTCTCTTGTGCTTAAACCGGAGGAGAAACAT 1018
Query 1019 ATGGCCGCATTGTTAGTTGAGAGGTCTGGCATTGACCTGAGGAGCCAAGTTACTGTCAAT 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 ATGGCCGCATTGTTAGTTGAGAGGTCTGGCATTGACCTGAGGAGCCAAGTTACTGTCAAT 1078
Query 1079 GGTACATGCAGCATTTCTTCGTCAGATGTCAAGTTTTTGTTAGTTGATACAGTAAAAGCT 1138
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1079 GGTACATGCAGCATATCTTCGTCAGATGTCAAGTTTTTGTTAGTTGATACAGTAAGAGCA 1138
Query 1139 AAAGTTTGGGCTGTGCAACACCTCTCATTCTCACTTTGGGATGCTCAAAATAAAGAGCTT 1198
||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1139 AAAGTGTGGGCTGTGCAGCACCTCTCATTCTCACTATGGGATGCTCAGAATAAAGAGCTT 1198
Query 1199 CTGAAAGTTTTTAATATTGATGGCCAAGTCGAAAATCGAGTGGACATGCCACCAACACAA 1258
||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||
Sbjct 1199 CTGAAAGTTTTTAATATTGATGGGCAAGTTGAAAATCGTGTGGACATGCCACCAACGCAA 1258
Query 1259 GGTCAACAAGTTGAAGACACGAAAGCGAAGTTCTTCTCCGCACCaaaaaaggaaaaaTCA 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1259 GGTCAACAAGTTGAAGACACGAAAGCGAAGTTCTTCTCCGCACCAAAAAAGGAGAAATCA 1318
Query 1319 CAGGGCTTTCTGCAAAGATCGCGCCATGCCATTATGGGAGCTGCAGGAGCTGTTCGTCGA 1378
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1319 CAGGGCTTTTTGCAAAGATCGCGCCATGCCATAATGGGAGCTGCAGGAGCTGTTCGTCGA 1378
Query 1379 GCTGCCACTAGAAGTGCAGGAGCTTTTGCAGAAGACACTAGGAAAGTAGAAGCTATTGCG 1438
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 GCTGCCACTAGAAGTACAGGAGCTTTTGCAGAAGACACTAGGAAAGTAGAAGCTATTGCG 1438
Query 1439 ATAGCGGCAGATGGATCAATTTGGACTGGAAGCATGAATGGTGTAATTGCTCAGTGGGAC 1498
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1439 ATAGCGGCAGATGGATCAATTTGGACTGGAAGCATGAATGGCGTAATTGCTCAGTGGGAC 1498
Query 1499 GGAAATGGAAGCCGCTTGCGGGAGGTGAATCATCATCAGCAGGCTGTTCTGTGCTTTTGC 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 GGAAATGGAAGCCGCTTGCGGGAGGTGAATCATCATCAGCAGGCTGTTCTGTGCTTTTGC 1558
Query 1559 ACTTTTGGTGATCGAATATATGTGGGTTATTCAAGTGGTTACATTCAGGTCTTGGATCTT 1618
|| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1559 ACCTTTGGTGATCGAATATATGTGGGTTATGCAAGTGGTTACATCCAGGTCTTGGATCTT 1618
Query 1619 GGTGGAAAGCTAATTGCAAGCTGGGTTTCACACAATGAACCTGTGATAAAGCTAGCAGCA 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1619 GGTGGAAAGCTAATTGCAAGCTGGGTTTCACACAATGAACCTGTGATAAAGCTAGCAGCA 1678
Query 1679 GGTGGTGGTTTCATTTTTAGCTTAGCCACTCATGGTGGTGTAAGAGGATGGTATGTGACA 1738
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1679 GGTGGTGGTTTCATTTTTAGTTTAGCCACTCATGGTGGTGTAAGAGGATGGTATGTGACA 1738
Query 1739 TCCCCAGGACCTCTTGACAGCTTAATCCGAACAGAATTGTCTCAAAAGGAAATGGCATAT 1798
|| ||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1739 TCTCCAGGACCTCTAGACAGCGTAATCCGAACAGAATTGTCTCAAAAGGAAATGACATAT 1798
Query 1799 GCCCGACAAGACAGTGTTAAAATCTTGATTGGTACCTGGAATGTTGGTGAAGGACGGGCT 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 GCCCGACAAGACAGTGTTAAAATCTTGATTGGTACCTGGAATGTTGGTGAAGGACGGGCT 1858
Query 1859 TCACGCGGAGCGCTTGTGTCTTGGCTGGGTTCTGCTGTTTCAGATGTTGGCATTGTCGCT 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1859 TCACGCGGAGCGCTTGTGTCTTGGCTGGGTTCTGCTGTTTCAGATGTTGGCATTGTCGCT 1918
Query 1919 ATTGGCTTGCAAGAGGTGGATATGGGGGCTGGTTTCCTAGCCATGTCCACTGCTAAGGAA 1978
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1919 GTTGGCTTGCAAGAGGTGGATATGGGGGCTGGTTTCCTAGCCATGTCCACTGCTAAGGAA 1978
Query 1979 ACGGTAGGGGTTGAAGGAAGTGCCGTGGGGCAATGGTGGCTTGATGCAATTGGAAATGCA 2038
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1979 ACGGTAGGGGTTGAAGGAAGTGCCGTGGGCCAGTGGTGGCTTGATGCAATTGGAAATGCA 2038
Query 2039 CTGGATGAGAGAAATACTTTCGAACGTATGGGTTCAAGGCAGTTGGCTGGACTGCTAATA 2098
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 2039 CTGGATGAGAGAAATACTTTCGAACGTATGGGTTCAAGGCAATTGGCAGGACTGCTAATA 2098
Query 2099 TCTCTTTGGGTGAGGAAGAGTATTAGGACACATGTCGGAGATCTTGATGTCGCAGCAGTT 2158
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 2099 TCTCTTTGGGTGAGGAAGAGTATTAGAACACATGTCGGGGATCTTGATGTCGCAGCAGTT 2158
Query 2159 CCATGTGGATTTGGCCGCGCCATAGGGAACAAGGGAGGTGTGGGTTTGAGAATCAGAGTT 2218
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2159 CCTTGTGGATTTGGCCGCGCCATTGGGAACAAGGGAGGTGTGGGTTTGAGAATCAGAGTT 2218
Query 2219 TATGACCGGATTATGTGCTTTGTGAACTGTCACTTGGCTGCTCACTTGGAGGCAGTTACT 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2219 TATGACCGGATTATGTGCTTTGTGAACTGTCACTTGGCTGCTCACTTGGAGGCAGTTACT 2278
Query 2279 CGGAGAAACGCGGATTTTAATCACATATATCGGTCAATGGTCTTCTCCAAAGGACAAAGT 2338
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 2279 CGGAGAAACGCGGATTTCAATCACATATATCGGTCAATGGTCTTTTCCAAAGGACAAAGT 2338
Query 2339 GTATATACTGCTGCAGCTGCTGGTGCTTCAACATCTGCTCAAGCGCTAAAGAATAACCCT 2398
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 2339 GTATATACTGCTGCAGCTGCTGGTGCTTCAACATCAGCTCAAGCGCTAAAAAATAACCCT 2398
Query 2399 AATACAAACAACAGCACTGAAGAGGAGAAGTCTCATTTAGCATCAGCAGATCTGGTTGCA 2458
|||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 2399 AATACAAACATCAGCACTGAAGAGGAGAAGTCTGATTTAGCAGCAGCAGATCTGGTTGCA 2458
Query 2459 TTTTTCGGTGACTTCAATTACAGGTTGTTTGGTATTACCTATGATGAAGCGAGGGACTTC 2518
||||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct 2459 TTTTTCGGTGACTTCAATTACAGATTGTTTGGTATAACCTACGATGAAGCTAGGGACTTC 2518
Query 2519 ATCTCGCACCGATCTTTTGATTGGCTCAGAGAGAAAGACCAACTTAGGCAAGAGATGAAT 2578
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2519 ATTTCGCACCGATCTTTTGATTGGCTCAGAGAGAAAGACCAACTTAGGCAAGAGATGAAT 2578
Query 2579 GAGGGAAAAGTGTTCCAAGGAATGCGTGAGGCATTAATCACCTTCCCGCCGACCTACAAA 2638
|||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct 2579 GAGGGAAAAGTGTTCCAAGGAATGCGTGAGGCGTTAATCACCTTCCCGCCAACTTACAAA 2638
Query 2639 TTTGAAAAGAATAAACCAGGTCTTGGAGGGTATGATTCAGGGGAGAAAAAGCGAATACCC 2698
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2639 TTTGAAAAGAATAAACCAGGTCTTGGAGGGTATGATTCAGGAGAGAAAAAGCGAATACCC 2698
Query 2699 GCTTGGTGTGACAGAGTTATATATAGAGACAACCAATCAATCTCATATACGGAGTGCAGT 2758
|| ||||||||||||||||||||||||||||||||||||||||||||| | || ||||||
Sbjct 2699 GCATGGTGTGACAGAGTTATATATAGAGACAACCAATCAATCTCATATTCAGAATGCAGT 2758
Query 2759 TTAAAGTGCCCTGTAGTTTCGTCGACTATAATGTATGAAGCTTGCATGGATGTGACTGAG 2818
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2759 TTGCAGTGCCCTGTAGTTTCGTCGACTGTAATGTATGAAGCTTGCATGGATGTGACTGAG 2818
Query 2819 AGCGATCACAAACCCGTGCGGTGCAAACTTCATGCTAACATAGCTCACACCGATAAATCT 2878
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2819 AGTGATCACAAACCCGTGCGGTGCAAACTTCATGCTAACATAGCTCACACCGATAAATCT 2878
Query 2879 GTGCGAAGACAGGAGCTAGGGAAAATAGTCAAGTCGAATGAGAAACTCAGAGCCATGTTC 2938
||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||||||||
Sbjct 2879 GTGCGAAGACAGGAGCTAGGGAAAATAGTAAAGTCCAATGAGAAACTCAAATCCATGTTC 2938
Query 2939 GAGGAACTAAAATCAGTTCCAGAAACATCAGTGAGCACCAACAACATTCTTCTCCATAGT 2998
|||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 2939 GAGGAACTAAAATCGGTTCCGGAAACATCAGTGAGCACCAACAACATTCTTCTTCATAGT 2998
Query 2999 CAGGACACGTTCATCTTTACAATCAGAAACACTTCAAACTCGAGTAGAGCCATCTTCAAC 3058
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2999 CAGGACACTTTCATCTTTACTATCAGAAACACTTCAAACTCGAGTAGAGCCATCTTCAAC 3058
Query 3059 ATCGTCTGTAAGGGTCAAACTCTCGTTAGAGAGGATGGAGAGGAACCTGATAATCATTCA 3118
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3059 ATCGTCTGCAAGGGTCAAACTCTCGTTAGAGAGGATGGAGAGGAACCTGATAATCATTCA 3118
Query 3119 AGAGGCACATTTGGTCTCCCTCGCTGGCTTGAGGTTTCTCCAGGAGCTGGGATTATAAAA 3178
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3119 AGAGGCACCTTTGGTCTCCCTCGCTGGCTTGAGGTTTCTCCAGGAGCTGGGATTATAAAA 3178
Query 3179 CCAGATGCTTCACTGCAGGTGAAGGTTCATCATGAAGACTCCCACAACTCGGAGGAGTTC 3238
|||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| |
Sbjct 3179 CCAGATGCTTCACTGCAGGTGAAGGTTCATCATGAAGACTTTCACACCTCAGAGGAGTCC 3238
Query 3239 ATTGATGGCATCCAACAAAACTCATTGTCTGAAGAAAGTTCTGACAAAGAAGTGACCCTG 3298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 GTTGATGGCATCCAACAAAACTCATTGTCTGAAGAAAGTTCTGACAAAGAAGTGACCCTG 3298
Query 3299 ATCATAATCGTTCAGGGAAGCTGCTCGACCAGAACAATAAGCCACTCTATCAAAGTCCGG 3358
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3299 ATCATAATCATTCAGGGAAGCTGCTCGACCAGAACAACAAGCCACTCTATCAAAGTCCGC 3358
Query 3359 CACTGCTCCTCCGCAGCCAAATCCCTTAGTCTTGTTCATTCTAAAACAACCACCATGACT 3418
||||||||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 3359 CACTGCTCCTCAGCAGTCAAATCCCTTAGTCTCGTTCATTCTAAAACAACCAGCATGACA 3418
Query 3419 AAGAATCTAGAGGGTTCCACTCGTTACCAGACAGATGCTAACCG 3462
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3419 AAGAATCTAGAGGGTTCCACTCGTTACCAGACAGATGCTAACCG 3462
Score = 143 bits (77), Expect = 1e-32
Identities = 87/92 (95%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 3464 GATCGTAGGAGCAGCAGAACTGTGAAGCCATCAAAAGAAATGCATCCAGTTATAGTTTCT 3523
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3545 GATCTTAGGAGCAGAAGAACTGTGAAGCCATCAAAAGAAATGCATCCAGTTATAGTTTCT 3604
Query 3524 TCATTTTCATTCCTTAATTCATCGGATATTAG 3555
|||||||||||| || |||||| |||||||||
Sbjct 3605 TCATTTTCATTCTTTGATTCATTGGATATTAG 3636
> Ahg470566 jgi|Araly1|470566|fgenesh2_kg.1__520__AT1G05630.1
Length=3849
Score = 1831 bits (991), Expect = 0.0
Identities = 1639/1950 (84%), Gaps = 51/1950 (3%)
Strand=Plus/Plus
Query 414 GGGAGGATGATATCGAGTCCCTT-CCAGAATTCATTGGCGCAGGAGG-TG-GCCTTGACG 470
|||| || || | |||| || || || |||||||| ||||| ||||| | ||| ||
Sbjct 437 GGGATGACGACACCGAG-CCATTACCTGAATTCATCGGCGCTGGAGGCGGCGCCGGGA-- 493
Query 471 TATTCAAGGTGCCGGTGCGTGCCGCGGTGAATCCCGGACGGCCTCCATGTCTCGAGCTCC 530
|||||||||| |||||||| || |||||| |||||||||| || || ||||| |||||
Sbjct 494 TATTCAAGGTCCCGGTGCGCGCGGCGGTGCATCCCGGACGTCCGCCGTGTCTTGAGCTGA 553
Query 531 GACCGCATCCATTAAGAGAGACACAGAC-GGGAAAGTTTC-TGAGAAACATTGCTTGCAC 588
| || ||||| ||||| ||||| ||||| |||||| ||| |||| ||||||||||| ||
Sbjct 554 GGCCACATCCGTTAAGGGAGACGCAGACTGGGAAA--TTCTTGAGGAACATTGCTTGTAC 611
Query 589 AGA-AAGTCAGCTATGGGCGGGACAAGAGAACGGCGTGAGGTTCTGGAACTTGGAGGAAG 647
|| | | ||||| ||||| || |||||||| || |||||||||||||| ||||| || |
Sbjct 612 GGAGACG-CAGCTTTGGGCTGGTCAAGAGAATGGTGTGAGGTTCTGGAATTTGGAAGATG 670
Query 648 CATACGAGGTC-GGTTGTGGCCTTGGCGGGCAGGTACGGCGAGGGGATGAGGATACAGCC 706
| || |||| | || ||||| |||| || |||||||||||||||||||| ||||| ||
Sbjct 671 CGTATGAGG-CTGGGTGTGGTATTGGTGGCCAGGTACGGCGAGGGGATGAAGATACGGCG 729
Query 707 CCGTTTCATGAATCTGTTCCGACCTCGCCTGCCTTATGTTTATTGGTTGACCACGGCAAT 766
||||||||||| || ||| | || || ||| | | ||||| ||| |||||| ||||
Sbjct 730 CCGTTTCATGAGTCGGTTACTACTTCTCCTACAATGTGTTTGGTGGCTGACCAAAGCAAC 789
Query 767 AGGCTTGTGTGGACCGGCCACAAGGATGGCAAAATTAGGGCCTGGAAAATGAATCAGCCC 826
| |||| |||||| || ||||||||||||||||| |||| ||||| ||| |||||
Sbjct 790 AAGCTTTTGTGGAGTGGTCACAAGGATGGCAAAATCCGGGCTTGGAAGATGGATCAG--- 846
Query 827 AATAC-GACTACTG--CA-GATGATTCAAAGCCTTTCAAGGAACGACTCTCATGGCAAGC 882
| | | | | ||| | ||||||||||| ||||||||||| ||| |||| |||| |||
Sbjct 847 AGTTCTG-TTTCTGATGATGATGATTCAAATCCTTTCAAGGAGCGAATCTCGTGGCTAGC 905
Query 883 TCATCGTGGTCCTGTGAATTATATTGTCATAAGCTCATATGGTGATATGTGGTCATGTTC 942
||||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||
Sbjct 906 TCATCGTGGTCCTGTCAATTCCATTGTCATTAGCTCTTATGGTGATATGTGGTCATGTTC 965
Query 943 TGATGGCGGTGTGATAAAGATATGGACTTTGGATTCTTTAGAGAAGTCTCTTG-TGCTAA 1001
||| || ||||||||||| |||||| ||| |||| | |||||||| |||| || |||| |
Sbjct 966 TGAAGGAGGTGTGATAAAAATATGGCCTTGGGATACGTTAGAGAAATCTC-TGCTGCTTA 1024
Query 1002 AACTGGAGGAGAAGCATATGGCCGCATTGTTAGTTGAGAGGTCTGGCATTGACCTGAGGA 1061
||| ||||||||| || ||||| || || ||||| |||||||||| ||||||||| ||||
Sbjct 1025 AACCGGAGGAGAAACACATGGCTGCTTTATTAGTGGAGAGGTCTGCCATTGACCTAAGGA 1084
Query 1062 GCCAAGTTACTGTCAATGGTACATGCAGCATTTCTTCGTCAGATGTCAAGTTTTTGTTAG 1121
||||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct 1085 GCCAAGTTACTGTCAATGGGACATGTAGCATATCTTCCTCAGAAGTCAAGTTTTTGTTAG 1144
Query 1122 TTGATACAGTAAAAGCTAAAGTTTGGGCTGTGCA-ACACCTCTCATTCT-CACTTTGGGA 1179
||| |||||| ||||||||| ||||||||||| || |||||||||| || | |||||
Sbjct 1145 CCGATTCAGTAAGAGCTAAAGTGTGGGCTGTGCAGTCA-CTCTCATTCTCCA-TCTGGGA 1202
Query 1180 TGCTCAAAATAAAGAGCTTCTGAAAGTTTTTAATATTGATGGCCAAGTCGAAAATCGAGT 1239
||||| | |||||| |||||||||||||| ||| |||| || ||||| || ||||| |
Sbjct 1203 TGCTCGGAGTAAAGACCTTCTGAAAGTTTTAAATGTTGAGGGGCAAGTTGAGAATCGTGG 1262
Query 1240 GGACATGCCACCAACACAAGGTCAACAAGTTGA--A-GACACGAAAGCGAAGTTCTTCTC 1296
|||||||||||| | ||||| ||||||||||| | || | |||| ||||||||||||
Sbjct 1263 GGACATGCCACCTATACAAGACCAACAAGTTGATGATGAAATGAAATTGAAGTTCTTCTC 1322
Query 1297 CGCACCaaaaaaggaaaaaTCACAGGGCTTTCTGCAAAGATCGCGCCATGCCATTATGGG 1356
|| |||||| ||||||| |||||||||||||||| |||| ||| |||| || |||||
Sbjct 1323 GGCTTCAAAAAGGGAAAAACCACAGGGCTTTCTGCAGCGATCACGCAATGCTATAATGGG 1382
Query 1357 AGCTGCAGGAGCTGTTCGTCGAGCT-GCCACTAGAAGTGCAGGAGC-TTTTGCAGAAGAC 1414
|||||||||||||||||| |||| | ||||||||||||||||| || |||| |||||||
Sbjct 1383 AGCTGCAGGAGCTGTTCGCCGAG-TCGCCACTAGAAGTGCAGGTGCGTTTT-CAGAAGAT 1440
Query 1415 ACTAGGAAAGTAGAAGCTATTGCGATAGCGGCAGATGGATCAATTTGGACTGGAAGCATG 1474
||||||||| ||||||||| | | |||| | ||||||| |||| ||||||||||||||
Sbjct 1441 ACTAGGAAAACAGAAGCTATCGTGTTAGCTGTAGATGGAACAATATGGACTGGAAGCAT- 1499
Query 1475 AA-TGGTGTAATTGCTCAGTGGGACGGAAATGGAAGCCGCTTGCGGGAGGTGAATCATCA 1533
|| ||| | |||| ||||||||| |||||||||| |||||||||||| |||||||| ||
Sbjct 1500 AAGTGGCCTCATTGTTCAGTGGGATGGAAATGGAAACCGCTTGCGGGATGTGAATCACCA 1559
Query 1534 TCAGCAGG-CTGTTCTGTGCTTTTGCACTTTTGGTGATCGAATATATGTGGGTTATTCAA 1592
||| | || ||||| ||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 1560 TCA-CCGGCCTGTTTTGTGCTTTTGCACTTTTGGCGATCGAATATATGTGGGTTATGCAA 1618
Query 1593 GTGGTTACATTCAGGTCTTGGA-TCTTGGTGGAAAGCTAATTGCAAGCTGGGTTTCACAC 1651
|||| ||||| ||||||||||| || | |||||||||||| |||||||||||||||||
Sbjct 1619 GTGGCTACATCCAGGTCTTGGATTC-CGACGGAAAGCTAATTTCAAGCTGGGTTTCACAC 1677
Query 1652 AATGAACCTGTGATAAAGCTAGCAGCAGGTGGTGGTTTCATTTTTAGCTTAGCCACTCAT 1711
|||||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct 1678 AATGAACCTGTGATAAAGCTAGCAGCAGGTGGTGGTTTCATTTTCAGTTTGGCCACTCAT 1737
Query 1712 GGTGGTGTAAGAGGATGGTATGTGACATCCCCAGGACCTCTTGACAGCTTAATCCGAACA 1771
||||| ||| ||||||||||||||||||| |||||||| || |||| | ||||||| ||
Sbjct 1738 GGTGGAGTACGAGGATGGTATGTGACATCTCCAGGACCCCTGGACAACATAATCCGTACG 1797
Query 1772 GAATTGTCTCAAAAGGAAA-TGGCATATGCCCGACAAGACAGTGTTAAAATCTTGATTGG 1830
||||||||||| ||||||| | ||||||| ||||||||| ||||| ||| || |||||
Sbjct 1798 GAATTGTCTCAGAAGGAAACTTT-ATATGCCAGACAAGACAATGTTAGAATTTTAATTGG 1856
Query 1831 TACCTGGAATGTTGGTGAAGGACGGGCTTCACGCGGA-GCGCTTGTGTCTTGGCTGGGTT 1889
|||||||||||||||| ||||||||||||||| | | || ||| |||| |||||||| |
Sbjct 1857 TACCTGGAATGTTGGTCAAGGACGGGCTTCACATG-ATGCACTTATGTCGTGGCTGGGAT 1915
Query 1890 CTG-CTGTTTCAGATGTTGGCATTGTCGCTATTGGCTTGCAAGAGGTGGATATGGGGGCT 1948
||| | || ||||||| |||||||||||| |||| |||||||||||||| ||||||||
Sbjct 1916 CTGTCACTT-CAGATGTAGGCATTGTCGCTGTTGGGTTGCAAGAGGTGGAGATGGGGGCA 1974
Query 1949 GGTTTCCTAGCCATGTCCACTGCTAAGGAAACGGTAGGGGTTGAAGGAAGTGCCGTGGGG 2008
|| ||||| |||||||| ||||||| |||||||| || ||||||||||||| ||||||
Sbjct 1975 GGCTTCCTTGCCATGTCTGCTGCTAAAGAAACGGTTGGACTTGAAGGAAGTGCTGTGGGG 2034
Query 2009 CAATGGTGGCTTGATGCAATTGGAAATGCACTGGATGAGAGAAATACTTTCGAACGTATG 2068
||||||||| |||||||||||||||| ||||| ||||||| ||| |||||||| ||||||
Sbjct 2035 CAATGGTGGATTGATGCAATTGGAAAAGCACTTGATGAGAAAAACACTTTCGAGCGTATG 2094
Query 2069 GGTTCAAGGCAGTTGGCTGGACTGCTAATATCTCTTTGGGTGAGGAAG-AGTATTAGGAC 2127
||||||||||||||||| ||||| || ||||||||||||| ||||||| | |||||| ||
Sbjct 2095 GGTTCAAGGCAGTTGGCAGGACTTCTGATATCTCTTTGGGCGAGGAAGGA-TATTAGAAC 2153
Query 2128 ACATGTCGGAGATCTTGATGTCGCAGCAGTTCCATGTGGATTTGGCCGCGCCATAGGGAA 2187
||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| || ||
Sbjct 2154 TCATGTTGGAGATCTTGATGTTGCAGCAGTTCCATGTGGTTTTGGCCGTGCCATTGGCAA 2213
Query 2188 CAAGGGAGGTGTGGGTTTGAGAATCAGAGTTTATGACCGGATTATGTGCTTTGTGAACTG 2247
|||||||||||| ||| |||||||||||||||||||||| || |||||||||||||| ||
Sbjct 2214 CAAGGGAGGTGTAGGTCTGAGAATCAGAGTTTATGACCGAATAATGTGCTTTGTGAATTG 2273
Query 2248 TCACTTGGCTGCTCACTTGGAGGCAGTTACTCGGAGAAACGCGGATTTTAATCACATATA 2307
||||||||||| || |||||||| |||| ||| |||||||||||||| |||||||| |
Sbjct 2274 CCACTTGGCTGCACATTTGGAGGCGGTTAATCGCAGAAACGCGGATTTCAATCACATTT- 2332
Query 2308 TCGG-TCAATGGTCTTCTCCAAAGGACAAA 2336
|| | | |||||||| ||| ||||||||
Sbjct 2333 TCCGATTTATGGTCTTTTCCCGAGGACAAA 2362
Score = 643 bits (348), Expect = 0.0
Identities = 800/1012 (79%), Gaps = 56/1012 (6%)
Strand=Plus/Plus
Query 2386 AAAGAATAACCCTAATACAAACAACAGCACTGAAGAGGA-GAAGTCTCAT-TTAGCATCA 2443
||||| |||| ||| | ||| || | || ||||||| | |||||| || || ||| ||
Sbjct 2514 AAAGAGTAACACTATTCCAAGCACCGGCGCTGAAGA-AATCAAGTCTGATCTT-GCAGCA 2571
Query 2444 GCAGATC-TGGTTGCATTTTTCGGTGACTTCAATTACAGGTTGTTTGGTATTACCTATGA 2502
||||| | |||| ||||||| ||||| ||||| || ||| |||||||||| ||||||||
Sbjct 2572 GCAGA-CATGGTCACATTTTTTGGTGATTTCAACTATAGGCTGTTTGGTATAACCTATGA 2630
Query 2503 TGAAGCGAGGGACTTCATCTCGCACCGATCTTTTGATTGGCTCAGAGAGAA-AGACCAAC 2561
|||||| || |||||||| || || ||||| ||||||||||||||||| || ||||||||
Sbjct 2631 TGAAGCAAGAGACTTCATTTCACAGCGATCCTTTGATTGGCTCAGAGA-AAGAGACCAAC 2689
Query 2562 TTAG-GCAAGAGATGAATGAGGGAAAAGTGTTCCAAGGAATGCGTGAGGCATTAATCACC 2620
|||| || ||||||||| | |||||||| |||||||||||||||||||||||||||||
Sbjct 2690 TTAGAGC-AGAGATGAAGGTTGGAAAAGTCTTCCAAGGAATGCGTGAGGCATTAATCACT 2748
Query 2621 TTCCCGCCGACCTACAAATTTGAAAAGAATAAAC-CAGGTCTTGGAGGGTATGATTCAGG 2679
||||| ||||| |||||||| |||| |||| | |||| |||||||| |||||||||||
Sbjct 2749 TTCCCTCCGACTTACAAATTCGAAAGGAATCG-CTCAGGCCTTGGAGGATATGATTCAGG 2807
Query 2680 GGAGAAAAAGCGAATACCCGCTTGGTGTGACAGAGTTATATATAGAGACAAC-CAATCAA 2738
||||||||||||||| || || |||||||||||||||||||||||||||| | |||||||
Sbjct 2808 GGAGAAAAAGCGAATTCCTGCGTGGTGTGACAGAGTTATATATAGAGACA-CTCAATCAA 2866
Query 2739 TCTCATA-TACGGAGTGCAGTTTA-AAGTGCCCTGTAGTTTCGTC-GACTATAATGTATG 2795
| ||| | | ||| ||| ||| || |||||||||||||| || | | ||||||||||
Sbjct 2867 GCCCATTCT-CAGAGAGCAATTTGCAA-TGCCCTGTAGTTTCATCAGTC-ATAATGTATG 2923
Query 2796 AAGCTTGCATGGATGTGACTGAGAGCGATCACAAACCCGTGCGGTGCAAACTTCATGCTA 2855
|||||||||||||||| ||||||||||||||||| |||||||| |||||| ||||||| |
Sbjct 2924 AAGCTTGCATGGATGTTACTGAGAGCGATCACAAGCCCGTGCGCTGCAAATTTCATGCGA 2983
Query 2856 AC-ATAGCTCACACCGATAAATCTGTGCGAAGACAGGAGCTAGGGAAAATAGTCAAG-TC 2913
| |||||||| |||||||| ||||| |||||||| || ||||||||| | ||| ||
Sbjct 2984 -CTATAGCTCATGTTGATAAATCAGTGCGGAGACAGGAACTGGGGAAAATAAT-AAGGTC 3041
Query 2914 GAATGAGAA-ACTCAGAGCCATGTTCGAGGAACTAAAATCAGTTCCAGAAACATCAGTGA 2972
|||||||| | | | |||| ||||| || ||| || ||||||||||| | ||||
Sbjct 3042 TAATGAGAAGATTTT-ATCCATATTCGAAGATTTAAGATTTGTTCCAGAAACTTTTGTGA 3100
Query 2973 GCACCAACAACATTCTTCTCCATAGTCAGGACAC-GTTCATCTTTACAATCAGAAACACT 3031
|||||||||||||| |||| || ||||| ||||| || |||| | ||||||| ||||| |
Sbjct 3101 GCACCAACAACATTGTTCTTCAGAGTCAAGACACAGT-CATCCTAACAATCACAAACAAT 3159
Query 3032 TCAAACTCGAGTAGAGCCATCTTCAACATCGTCTGTA-AG-GGTCAAACTCTCGTTAGAG 3089
||| | |||| | |||||| || || || ||||| || ||||| || | |||| ||
Sbjct 3160 TCACCCACGAGCAAAGCCATTTTTAAGAT--TCTGTGCAGCGGTCAGGCTGTAGTTA-AG 3216
Query 3090 -AGGATGGAGAGGAACCTGA-TAATCATTCAAGAGGCACATTTGGTCTCCCTCGCTGGCT 3147
| || ||||| || |||| || | || || ||||| | ||||| || || ||||||||
Sbjct 3217 GATGACGGAGAAGATTCTGACTA-TAATCCACGAGGCTCCTTTGGCCTACCACGCTGGCT 3275
Query 3148 TGAGGTTTCTCCAG-GAGCTGGGATTATAAAACCAGATGCTTCAC-TGCAGGTGAAGGTT 3205
||||||||| || | | || ||||| ||||| ||||| | || | || | || || |||
Sbjct 3276 TGAGGTTTCGCCCGCG-GCCGGGATAATAAATCCAGAAGGATC-CGTGGACGTTAAAGTT 3333
Query 3206 CATCATGAAGACTCCCAC--AACTCGGAGGAGT-TCATTGATGGCATCCAACAAAACTCA 3262
||||| ||||| | ||| || | |||||| | | |||||||||||| ||| || |
Sbjct 3334 CATCAGGAAGATTTTCACTCAA-T-GGAGGAATGTG-TTGATGGCATCCCACAGAATTGG 3390
Query 3263 TTGT-CTGAAGAAAGTTCT-GACAAAGAAGTGACCCTGATCA-T-AATCGTTC-AGGGAA 3317
| || | ||||| | | | || ||||||| | ||||| | | || | ||| ||| ||
Sbjct 3391 TGGTGC-GAAGACACT-CGAGATAAAGAAGCAATCCTGA-CGGTGAA-CATTCGAGG-AA 3445
Query 3318 GCTGCTCGACCAGAACAATAAGCCACTCTATCAAAGTCCGGCACTGCTCCTC 3369
||||||| || | | | ||||||||||||||||||||| ||||||| |||
Sbjct 3446 GCTGCTCAACTACATTGACAAGCCACTCTATCAAAGTCCGTCACTGCTTCTC 3497
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 138072874844
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5