BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT2G32240.1

Length=4480
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg913815 jgi|Araly1|913815|Al_scaffold_0001_4069                   56.5    2e-06


> Ahg913815 jgi|Araly1|913815|Al_scaffold_0001_4069
Length=300

 Score = 56.5 bits (30),  Expect = 2e-06
 Identities = 30/30 (100%), Gaps = 0/30 (0%)
 Strand=Plus/Plus

Query  807  AGAAATTTGAAGAGCTGCATAAGCAAAGTG  836
            ||||||||||||||||||||||||||||||
Sbjct  25   AGAAATTTGAAGAGCTGCATAAGCAAAGTG  54



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 169470372569


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5