BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G32450.1
Length=2810
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482172 jgi|Araly1|482172|fgenesh2_kg.4__1232__AT2G32450.1 4067 0.0
Ahg470505 jgi|Araly1|470505|fgenesh2_kg.1__459__AT1G05150.1 2494 0.0
> Ahg482172 jgi|Araly1|482172|fgenesh2_kg.4__1232__AT2G32450.1
Length=2602
Score = 4067 bits (2202), Expect = 0.0
Identities = 2417/2520 (96%), Gaps = 18/2520 (1%)
Strand=Plus/Plus
Query 82 TTTCCTACATTGGATTCTCACTTTTAGATTTTGTGGGGAGGGAAAGATAAAAGGTTGGAT 141
||| ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1 TTTGCTACATTGGATTCTCACTTTTTGATTTTGTGGGGAGGGAAAGAAAAAAGTTTGGAT 60
Query 142 TTTTATTTTTCCGGTGAGGAAAAAATGACGACGAGAGGAAGCAGATCGGAGAAAGTCAAG 201
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 61 TTTTATTTTTCCGGTGAGGAAAATATGACGACCAGAGGAAGCAGATCGGAGAAAGTCAAG 120
Query 202 AGAATTTTCCAGCAATTCGACGGGAATC-TCGACGGAGGATTAAGCCGTGAAGAGATGTC 260
|||||||||||||||||||| || || | | ||||| || |||||| | |||||||||||
Sbjct 121 AGAATTTTCCAGCAATTCGATGGAAACCGT-GACGGCGGTTTAAGCAGAGAAGAGATGTC 179
Query 261 AGCTCTCGTCGTAGCTGTGAACCCTAGGGTTAAATTCAGCGACGAACAGATAAGCGCAAT 320
||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||
Sbjct 180 AGCTCTCGTCGTAGCTGTGAACCCTAGAGTTAAATTCAGCGACGAACAAATCAGCGCAAT 239
Query 321 TCTCGATGAAGTGTTTCGAACCTACGCTGAATTCATCGACGGAGATAAAGGTTTGACCTT 380
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TCTCGACGAAGTGTTTCGTACCTACGCTGAATTCATCGACGGAGATAAAGGTTTGACCTT 299
Query 381 TGACGGTCTTCTCCGAACTTACGACGACGGTGCTGGAGATGTTGATCGTGATTTCGACGC 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 TGACGGTCTTCTCCGAACTTACGACGACGGTGCTGGAGATGTTGATCGTGATTTCGACGC 359
Query 441 TTTAGGGATTGAGTTTAA---CGAAGAGACAAAGGGTGCCTCTGAAGCTTCGTCATCTTC 497
|||||||||||||||||| ||| ||| ||||||||| ||| ||||||||||| |||||
Sbjct 360 TTTAGGGATTGAGTTTAACGCCGATGAGCCAAAGGGTGGCTCGGAAGCTTCGTCTTCTTC 419
Query 498 GATTACTGATGAGAGAGCTGTTGAAGCGCAGAAGCAGCAGAGAACGGCAGCTTGGGCGGT 557
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 420 GATTACTGATGAGAGAGCTGTTGAGGCGCAGAAGCAGCAGAGAACGGCGGCTTGGGCGGT 479
Query 558 TTCGCCGAACCATGGTATTGTTTTCGATGAGACGTGGAAGCTTGTTGATGATTTGGAGAT 617
||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 480 TTCGCCGAATCATGGAATTGTTTTTGATGAGACGTGGAAGCTTGTTGATGATTTGGAGAT 539
Query 618 TTTGGTTAAGAGATTGAAGTCTAAGCAGGAGAAAGATGGGAAATTGAAAGTGG---ATAA 674
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 540 TTTGGTTAAGAGGTTGAAGTCTAAGCAGGAGAAAGATGGGAAATTGAAAGTGGATAATAA 599
Query 675 TAATAATGTTGATGCGTTTTCTGAAGCTGGATGGTCTAGAGAGTTAGGACCGTCTTCGGA 734
||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 600 TAATAATGTGGATGCGTTTTCTGATGCTGGATGGTCTAGAGAGTTGGGACCGTCTTCGGA 659
Query 735 TATTTCGGATAAGAGAATCTATTGGGAAGAATCGAGTCATGATTATG-GAGTGTTTGTGA 793
||||||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||
Sbjct 660 TATTTCGGATAAGAGAATCTATTGGGAAGAATCGAGTCACGATTACGCG-GTGTTTGTGA 718
Query 794 AGGAATTAGGTGTGTTGAGAAGTAAAGCAGATGGTGCTAGATCAAGAGAAGAAGCTTTTG 853
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 719 AGGAATTAGGTGTGCTGAGAAGTAAAGCTGATGGTGCTAGATCAAGAGAAGAAGCTTTTG 778
Query 854 ATGGACATATGGCGATTGGTAAGGTTTTGTATGAGCACCAGTTGTTTAAAGAAGCTCTTG 913
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 779 ATGGACATATGGCGATTGGTAGGGTTTTGTATGAGCATCAGTTGTTTAAAGAAGCTCTTG 838
Query 914 TTAGTTTTAAGAGAGCTTGTGAGTTGCAACCGACT-GATGTGAGACCTCATTTCAAAGCT 972
||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||
Sbjct 839 TTAGTTTTAAGAGAGCTTGCGAGTTGCAACCGA-TGGATGTGAGACCTCATTTCAAAGCT 897
Query 973 GGGAATTGTCTTTATGTATTGGGGAAGTATAAAGAGTCGAAAGACGAGTTCTTGTTGGCG 1032
||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 898 GGGAATTGTCTTTATGTATTGGGGAGGTATAAAGAGTCGAAAGACGAGTTTTTGTTGGCA 957
Query 1033 TTGGAAGCTGCGGAGTCTGGTGGGAATCAATGGGCTTACTTGCTTCCTCAGATTTATGTC 1092
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TTGGAAGCTGCGGAGTCCGGTGGGAATCAATGGGCTTACTTGCTTCCTCAGATTTATGTC 1017
Query 1093 AATCTTGGTATCTCTCTTGAAGGTGAAGGTATGGTTTTGAGTGCTTGTGAGTATTATAGA 1152
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 AATCTCGGTATCTCTCTTGAAGGTGAAGGTATGGTTTTGAGTGCTTGTGAGTATTATAGA 1077
Query 1153 GAGGCTGCGATTCTTTGTCCAACGCATTACAGAGCCTTGAAGCTTCTAGGTAGTGCTCTG 1212
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1078 GAGGCTGCGATTCTTTGTCCAACGCATTATAGAGCCTTGAAGCTTCTAGGTAGTGCTCTG 1137
Query 1213 TTTGGTGTAGGAGAGTATAGAGCTGCTGTGAAGGCTTTAGAGGAAGCTATATATTTGAAA 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 TTTGGTGTAGGAGAGTATAGAGCTGCTGTGAAGGCTTTAGAGGAAGCTATATATTTGAAA 1197
Query 1273 CCGGATTATGCTGATGCGCATTGTGATTTGGCTTCGTCGCTTCATGCAATGGGGGAGGAT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1198 CCGGATTATGCTGATGCGCATTGTGATTTGGCTTCGTCGCTTCATGCAATGGGTGAGGAT 1257
Query 1333 GAGAGGGCTATTGAGGTTTTCCAGAGAGCTATAGATTTGAAACCTGGTCATGTTGATGCT 1392
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1258 GAGAGGGCTATTGAGGTTTTCCAGAGAGCTATAGATTTGAAACCTGGCCATGTCGATGCT 1317
Query 1393 CTTTATAACCTCGGTGGGCTTTACATGGATTTGGGTAGGTTTCAAAGAGCTTCAGAGATG 1452
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1318 CTTTATAACCTCGGTGGGCTTTACATGGATTTGGGTAGGTTTCAGAGAGCTTCGGAGATG 1377
Query 1453 TACACTAGAGTTTTAGCGGTGTGGCCTAACCATTGGCGTGCACAACTCAACAAGGCTGTG 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1378 TACACTAGAGTTTTAGCGGTGTGGCCTAACCATTGGCGTGCACAACTCAACAAGGCTGTG 1437
Query 1513 TCCTTGTTGGGTGCTGGAGAGACCGAAGAAGCTAAAAGGGCTTTAAAGGAGGCCCTGAAA 1572
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1438 TCCTTGTTGGGCGCTGGAGAGACCGAAGAAGCTAAGCGGGCTTTAAAGGAGGCCCTGAAA 1497
Query 1573 ATGACTAACCGAGTTGAGTTGCACGATGCGGTATCTCATCTGAAACAGTTGCAGAAGAAG 1632
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1498 ATGACAAACCGAGTTGAGTTGCACGATGCAGTATCTCATCTGAAACAGTTGCAGAAGAA- 1556
Query 1633 AAAAAGGTCAAAAAAGGAAATAGTGCTAACGAAGAAGGTCCGTTTATTGTTGTGGAATCT 1692
||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 1557 AAA--GGTCAAAAAAGGAAATAGTGCGAACGAAGAAGGTCCGTTTATTGTTGTGGAACCT 1614
Query 1693 TCCAAATTCAAGACGGTAGGCGAGAAGACTACTTTAAGGCCAGATTTAGCCATAGCTCTT 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1615 TCCAAATTCAAGACGGTAGGCGAGAAGACTACTTTAAGGCCAGATTTAGCCATAGCTCTT 1674
Query 1753 CAAGTTAGAGCCTTCCAGAGAGTCACAAGGCTGTGGAAATGCGATGTTGAAGCATTAAGA 1812
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1675 CAAATTAGAGCCTTCCAGAGAGTTACAAGGCTGTGGAAATGCGATGTTGAAGCATTAAGA 1734
Query 1813 AGAGAGATGAGAGACAACAATGTTCCTGTATCCTATTCCGGCAATGGAATTCCCACAAAA 1872
|||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||
Sbjct 1735 AGAGAGATGAGAGACAACGATGTTCCTGTATCCTATTCCGGCAATGGAGTGCCCACAAAA 1794
Query 1873 TCTATAAGGAGACCAAACTTAGAAGAGATTCTCCGGCGTCTGCTTAATGTCCTGAAACCT 1932
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 1795 TCTATAAGGAGACCAAACTTAGAAGAGATTCTCCGGCGTCTACTTGATGTCCTGAAACCT 1854
Query 1933 GAAACTTTCCAAGGAGCTATTAAGGCCATAAACGAGAAAATCCTCTCGGTTCTTGATGAT 1992
||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct 1855 GAAACTTTCCAAGGAGCGATTAAGGCCATAAACGAGAAAATCCTCTCGGTGCTCGATGAT 1914
Query 1993 TCAGGGTCGGGAAGAGTCGATTTGGGAATGTTTTACGCAGTGATTGCTCCTTTATGCGGT 2052
||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||
Sbjct 1915 TCAGGGTCGGGAAGAGTTGATTTGGGAATGTTTTATGCGGTGATTGCTCCTTTATGTGGT 1974
Query 2053 GGCCATCCAGACAAAAGGAAAAGAGTTGCATTTGATGCGCTACTTTGGAAACCGGTAAAC 2112
||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||
Sbjct 1975 GGCCATCCAGACAAAAGGAAAAGAGTTGCATTTGATGCGCTTCTTTGGAAACCAGAAAAC 2034
Query 2113 GAAGGAAGCTCTCAGATTACAAAAATGGAAGCCGTCAAATACATCAAACTCTTGAGAGCT 2172
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2035 GCAGGAAGCTCTCAGATTACAAAAATGGAAGCCGTCAAATACATCAAACTCTTGAGAGCT 2094
Query 2173 ATCTACATACCATCACAAGGAATGAGTGAAATGTTAGAAGTTCATGGAGAAAGC-GATGA 2231
||||||||||| |||||||||||||| ||||||||||||||||||||||||| | |||||
Sbjct 2095 ATCTACATACCGTCACAAGGAATGAGCGAAATGTTAGAAGTTCATGGAGAAA-CTGATGA 2153
Query 2232 TACTTCGACGGTAACATTCAACCAGTTTCTAGAGATGTACGATGATTCAGAGTGGGGATT 2291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2154 TACTTCGACGGTAACATTCAACCAGTTTCTAGAGATGTACGATGATTCAGAGTGGGGATT 2213
Query 2292 TGGTATCATGTCGACTGTTTTTAAACTCGAAACAAGAGATAGGAATCGACACGGGAACCA 2351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2214 TGGTATCATGTCGACTGTTTTTAAACTCGAAACAAGAGATAGGAATCGACACGGGAACCA 2273
Query 2352 GGTTTGTTCAGTTTGCCGATATCCGATTATCGGGTCTCGGTTTAAGGAAGTGAAAACAGG 2411
||| ||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2274 GGTCTGTTCGGTTTGTCGATATCCGATTATCGGGTCTCGGTATAAGGAAGTGAAAACAGG 2333
Query 2412 GTTTAGCCTCTGTAACCAATGTTACAGCGAAGGGAAGATTCCTCCAACGTTTAAACAGCA 2471
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2334 GTTTAGCCTCTGTAACCAATGTTACAGCGAAGGGAAAATTCCTCCAACGTTTAAACAGCA 2393
Query 2472 GGAGGAATATAAATTCAGAGAGTATGCGAGTGAAGTGGAAGCCATGAAAGCTAAGTGTGT 2531
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 2394 GGAGGAATATAAATTCAGAGAGTATGGGAGTGAAGTGGAAGCCATGAAAGCTAAGTGTAT 2453
Query 2532 TTGTTTTTCAATGCAATCTCATaaaaaaaCAATAGCCACTTGAAAAATATCCATAAGttt 2591
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2454 TTGTTTTTCAATGCAGTCTCATAAAAAA-CAATAGCCACTTGAAAAATATCCATAAGTTT 2512
> Ahg470505 jgi|Araly1|470505|fgenesh2_kg.1__459__AT1G05150.1
Length=2827
Score = 2494 bits (1350), Expect = 0.0
Identities = 2102/2460 (85%), Gaps = 71/2460 (3%)
Strand=Plus/Plus
Query 161 AAAAAATGACGACGAGAGGAAGCAGATCGGAGAAAGTCAAGAGAATTTTCCAGCAATTCG 220
|||||||| |||| ||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 193 AAAAAATGGCGACTAGAGGAAGCAGATCGGAGAAAGTTAAGAGGATTTTCCAGCAATTCG 252
Query 221 ACGGGAATC-TCGACGG-AGGATTAAGCCGTGAAGAGATGTCAGCTCTCGTCGTAGCTGT 278
||||||||| | || || || |||| ||| ||||||||| | ||||| || || |||||
Sbjct 253 ACGGGAATCAT-GATGGTGGGCTTAA-CCGAGAAGAGATGGCGGCTCTTGTTGTTGCTGT 310
Query 279 GAACCCTAGGGTTAAATTCAGCGACGAACAGAT-AAGCGCAATTCTCGATGAAGTGTTTC 337
|||||||||||||||||||| ||||||||||| || ||| |||||||||||||| ||||
Sbjct 311 TAACCCTAGGGTTAAATTCAGTGACGAACAGATCAA-CGCGATTCTCGATGAAGTTTTTC 369
Query 338 GAACCTACGCTGAATTCATCGA-CGGAGATAAAGGTTTGACCTTTGACGGTCTTCTCCGA 396
|||| ||||||||||||||||| | | | || |||||||||| ||||||||||| ||
Sbjct 370 GAACTTACGCTGAATTCATCGATCCTA-ACAAGGGTTTGACCTACGACGGTCTTCTACGT 428
Query 397 ACTTACGACGACGGTGCTGGAGATGTTGATC-GTGATTTCGACGCTTTAGGGATTGAGTT 455
||||||||||||||||| ||||||||||| | | ||||||||||| |||||| |||||||
Sbjct 429 ACTTACGACGACGGTGCCGGAGATGTTGA-CAGAGATTTCGACGCATTAGGGCTTGAGTT 487
Query 456 TAA--C-GAAGAGACAAAGGGTGCCTCTGA---AGCTTCGTCATCTTCGATTACTGATGA 509
|| | || ||| | | | |||||| |||||||| |||||||||||||||||
Sbjct 488 AAACGCTGATGAGTCGATTAAAGACTCTGAGGTGGCTTCGTCTTCTTCGATTACTGATGA 547
Query 510 GAGAGCTGTTGAAGCGCAGAAGCAGCAGAGAACGGCAGCTTGGGCGGTTTCGCCGAACCA 569
|||||||||||| || |||||| | |||||||| || |||||||| ||||||||||| ||
Sbjct 548 GAGAGCTGTTGAGGCACAGAAGAAACAGAGAACTGCTGCTTGGGCTGTTTCGCCGAATCA 607
Query 570 TGGTATTGTTTTCGATGAGACGTGGAAGCTT-GTTGATGATTTGGAGATTTTGGTTAAGA 628
|||||| ||||| || |||||||||||| || |||||||||||||||||| |||| ||||
Sbjct 608 TGGTATCGTTTTTGACGAGACGTGGAAG-TTAGTTGATGATTTGGAGATTCTGGTGAAGA 666
Query 629 GATTGAAGTCTAAGCAGGAGAAAGATGGGAAATTGAAAG-TG--GAT---AAT---AAT- 678
|||||||||| || ||||||| ||||||||||||||||| || || ||| |||
Sbjct 667 GATTGAAGTCGAAACAGGAGAGAGATGGGAAATTGAAAGCTGATAATAACAATAACAATA 726
Query 679 --AATGTTGATGCGTTTTCTGAAGCTGGATGGTCTAGAGAGTTAGGACCGTCTTCGGATA 736
|||||||||||||||||||| ||||||||||||||||||||||| |||||||| || |
Sbjct 727 ACAATGTTGATGCGTTTTCTGATGCTGGATGGTCTAGAGAGTTAGGTCCGTCTTCTGAGA 786
Query 737 TTTCGGATAAGAGAATCTATTGGGAAGAATCGAGTCATGATTATGGAGTGTTTGTGAAGG 796
| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 TCTCTGAGAAGAGAATCTATTGGGAAGAATCGAGTCATGATTATGGAGTGTTTGTGAAGG 846
Query 797 AATTAGGTGTGTTGAGAAGTAAAGCAGATGGTGCTAGATCAAGAGAAGAAGCTTTTGATG 856
|||||||||| |||||||||||||| ||||| |||||||| ||||| |||||||||||||
Sbjct 847 AATTAGGTGTTTTGAGAAGTAAAGCTGATGGAGCTAGATCTAGAGAGGAAGCTTTTGATG 906
Query 857 GACATATGGCGATTGGTAAGGTTTTGTATGAGCACCAGTTGTTTAAAGAAGCTCTTGTTA 916
|||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||
Sbjct 907 GACATATGGCGATTGGTAGGGTTTTATATGAGCATCAGTTGTTTAAAGAAGCTCTTGTTA 966
Query 917 GTTTTAAGAGAGCTTGTGAGTTGCAACCGACTGATGTGAGACCTCATTTCAAAGCTGGGA 976
| || ||||||||||| || |||||||| |||||||||||||||||||||||||||||||
Sbjct 967 GCTTCAAGAGAGCTTGCGAATTGCAACCTACTGATGTGAGACCTCATTTCAAAGCTGGGA 1026
Query 977 ATTGTCTTTATGTATTGGGGAAGTATAAAGAGTCGAAAGACGAGTTCTTGTTGGCGTTGG 1036
|||||||||| || |||||||| | |||||||||||||| ||||| |||||||||||||
Sbjct 1027 ATTGTCTTTACGTTTTGGGGAAATGCAAAGAGTCGAAAGATGAGTTTTTGTTGGCGTTGG 1086
Query 1037 AAGCTGCGGAGTCTGGTGGGAATCAATGGGCTTACTTGCTTCCTCAGATTTATGTCAATC 1096
|||| || ||||| || |||||||| |||||||| || ||||||||||||||||||||||
Sbjct 1087 AAGCGGCTGAGTCGGGCGGGAATCAGTGGGCTTATTTACTTCCTCAGATTTATGTCAATC 1146
Query 1097 TTGGTATCTCTCTTGAAGGTGAAGGTATGGTTTTGAGTGCTTGTGAGTATTATAGAGAGG 1156
| |||||| | |||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct 1147 TCGGTATCGCGCTTGAAGGCGAAGGTATGGTTTTAAGTGCTTGTGAGTATTATAGAGAAG 1206
Query 1157 CTGCGATTCTTTGTCCAACGCATTACAGAGCCTTGAAGCTTCTAGGTAGTGC-TCTGTTT 1215
|||||||||| ||||| ||||||| |||||||||||||||||||||||||| | |||||
Sbjct 1207 CTGCGATTCTCTGTCCTACGCATTTTAGAGCCTTGAAGCTTCTAGGTAGTGCGT-TGTTT 1265
Query 1216 GGTGTAGGAGAGTATAGAGCTGCTGTGAAGGCTTTAGAGGAAGCTATATATTTGAAACCG 1275
|||||||||||||||||||| || || ||||| ||||||||||||||||| |||||||||
Sbjct 1266 GGTGTAGGAGAGTATAGAGCAGCGGTTAAGGCCTTAGAGGAAGCTATATACTTGAAACCG 1325
Query 1276 GATTATGCTGATGCGCATTGTGATTTGGCTTCGTCGCTT-CATGCAATGGGGGAGGATGA 1334
||||| || ||||| ||||||||||| |||||||| || ||| ||||||| || |||||
Sbjct 1326 GATTACGCGGATGCTCATTGTGATTTAGCTTCGTCT-TTGCATTCAATGGGTGAAGATGA 1384
Query 1335 GAGGGCTATTGAGGTTTTCCAGAGAGCTATAGATTTGAAACCTGGTCATGTTGATGCTCT 1394
||| ||||| ||||||||||||||||| || || ||||||||||| ||||||||||||||
Sbjct 1385 GAGAGCTATCGAGGTTTTCCAGAGAGCGATTGACTTGAAACCTGGCCATGTTGATGCTCT 1444
Query 1395 TTATAACCTCGGTGGGCTTTACATGGATTTGGGTAGGTTTCAAAGAGCTTCAGAGATGTA 1454
||||| ||||||||||||||||||||||| ||||||||||| |||||||| || |||||
Sbjct 1445 GTATAATCTCGGTGGGCTTTACATGGATTTAGGTAGGTTTCAGAGAGCTTCGGAAATGTA 1504
Query 1455 CACTAGAGTTTTAGCGGTGTGGCCTAACCATTGGCGTGCACAACTCAACAAGGCTGTGTC 1514
|||||| || |||||||| |||||||||||||||||||| || ||||||||||| || ||
Sbjct 1505 CACTAGGGTCTTAGCGGTATGGCCTAACCATTGGCGTGCTCAGCTCAACAAGGCGGTTTC 1564
Query 1515 CTTGTTGGGTGCTGGAGAGACCGAAGAAGCTAAAAGGGCT-TTAAAGGAGGCCCTGAAAA 1573
||||| ||||||||||||||||||||||||||| | || |||| ||| || ||||||
Sbjct 1565 TTTGTTAGGTGCTGGAGAGACCGAAGAAGCTAAACGAGCACTTAA-GGAAGCGCTGAAAC 1623
Query 1574 TGACTAACCGAGTTGAGTTGCACGATGCGGTATCTCATCTGAAACAGTTGCAGAAGAAGA 1633
|||| ||||| ||||| ||||| |||||| |||||||| ||||||| ||||||||||| |
Sbjct 1624 TGACAAACCGGGTTGAATTGCATGATGCGATATCTCATTTGAAACATTTGCAGAAGAA-A 1682
Query 1634 AAAAGGTCAAAA-AA-GGAAATAGTGCTA-ACGAAGAAGGTCCGTTTATTGTTGTGGAAT 1690
|| ||| |||| || |||||| || | | || |||||||| || || || ||||||
Sbjct 1683 AAG-GGTAAAAAGAATGGAAATGGTAATGGAGGA-GAAGGTCCATTCATCGTCGTGGAAC 1740
Query 1691 CTTCCAAATTCAAGACGGTAGGCGAGAAGACTACTTTAAGGCCAGATTTAGCCATAGCTC 1750
||||||| |||||||| || || |||||||| ||| | || || |||||||||| ||||
Sbjct 1741 CTTCCAAGTTCAAGACTGTGGGTGAGAAGACGACTCTGAGACCGGATTTAGCCACGGCTC 1800
Query 1751 TTCAAGTTAGAGCCTTCCAGAGAGTCACAAGGCTGTGG-AAATGCGATGTTGAAGCAT-T 1808
||||| |||| ||||| |||||||| |||||||| ||| ||||||||||| || || | |
Sbjct 1801 TTCAAATTAGGGCCTTTCAGAGAGTTACAAGGCT-TGGGAAATGCGATGTGGAGGC-TGT 1858
Query 1809 AAGAAGAG-AGATGAGAGACAACAATGTTCCTGTATCCTATTCCGGCAAT-GGAATTCCC 1866
||| || |||||||||||||| |||||||||| || |||||||| || || ||
Sbjct 1859 GCGAA-AGGAGATGAGAGACAACGATGTTCCTGTTTCGTATTCCGG-AAGCGGCGGGCCA 1916
Query 1867 ACAAAATCTATAAGGAGACCAAACTTAGAAGAGATTCTCCGGCGTCTGCTTAATGTCCT- 1925
||||||||||| |||| ||| || ||||| |||||||| ||||||||||| | | ||||
Sbjct 1917 ACAAAATCTATTAGGAAACCTAATTTAGAGGAGATTCTACGGCGTCTGCTCAGT-TCCTT 1975
Query 1926 GAAACCTGAAACTTTCCAAGGAGCTATTAAGGCCATAAACGAGAAAATCCTCTCGGTTCT 1985
|||||| || ||||| |||||||| |||||||| |||||||||||||||||||| ||||
Sbjct 1976 GAAACCCGACACTTTTCAAGGAGCGATTAAGGCTATAAACGAGAAAATCCTCTCTCTTCT 2035
Query 1986 TGATGATTCAGGGTCGGGAAGAGTCGATTTGGGAATGTTTTACGCAGTGATTGCTCCTTT 2045
|||||| || |||||||||||||| ||| |||| |||||||| || ||||||||||||||
Sbjct 2036 TGATGACTCGGGGTCGGGAAGAGTTGATATGGGTATGTTTTATGCCGTGATTGCTCCTTT 2095
Query 2046 ATGCGGTGGCCATCCAGACAAAAGGAAAAGAGTTGCATTT-GATGCGCTACTTTGGAAAC 2104
||||||||| ||| |||||||| ||||||||||||| ||| |||||||| ||||||| ||
Sbjct 2096 ATGCGGTGGACATTCAGACAAACGGAAAAGAGTTGC-TTTCGATGCGCTTCTTTGGAGAC 2154
Query 2105 CGGTAAACGAAGGAAGCTCTCAGATTACAAAAATGGAAGCCGTCAAATACATCAAACTCT 2164
| ||||||||||||||||||||||||||||||| || || ||||||||||| ||||| |
Sbjct 2155 CCGTAAACGAAGGAAGCTCTCAGATTACAAAAACAGATGCAGTCAAATACATTAAACTGT 2214
Query 2165 TGAGAGCTATCTACATACCATCACAAGGAATGAGTGAAATGTTAGAAGTTCATGGAGAA- 2223
|||||||||| ||||| |||||||| |||||||||||||||||||||||||| || |||
Sbjct 2215 TGAGAGCTATTTACATTCCATCACATGGAATGAGTGAAATGTTAGAAGTTCACGGGGAAG 2274
Query 2224 A-GC-GATGATACTTC---GACGGTAACATTCAACCAGTTTCTAGAG-ATGTACGATGAT 2277
| | | || | | || ||| || ||||| || |||||| || | |||| ||| |||
Sbjct 2275 AAGAAGCTGGTTCCTCAATGACAGTGACATTTAATCAGTTTTTA-ACCATGTTCGACGAT 2333
Query 2278 TCAGAGTGGGGATTTGGTATCATGTCGACTGTTT-TTAAACTCGAAACAAGA-GATAGGA 2335
|||| |||||||||||||||||||| || | | ||||||| || ||| | ||||| |
Sbjct 2334 CCAGATTGGGGATTTGGTATCATGTCTAC-GATCCTTAAACTGGAGGCAA-ACGATAGAA 2391
Query 2336 ATCGACACGGGAACCAGGTTTGTTCAGTTTGCCGATATCCGATTATCGGGTCTCGGTTTA 2395
| || || || ||||| ||||| || ||||| || |||||||| ||||| || |||||||
Sbjct 2392 ACCGTCATGGAAACCAAGTTTGCTCGGTTTGTCGGTATCCGATAATCGGATCCCGGTTTA 2451
Query 2396 AGGAAGTGAAAACAGGGTTTAGCCTCTGTAACCAATGTTACAGCGAAGGGAAGATTCCTC 2455
||||||||||| | ||||||| | |||||||| |||||||| ||||||||| ||||||
Sbjct 2452 AGGAAGTGAAAGCCCGGTTTAGTTTGTGTAACCAGTGTTACAGTGAAGGGAAGGTTCCTC 2511
Query 2456 CAACGTTTAAACAGCAGGAGGAATATAAATTCAGAGAGTATGCGAGTGAAG-TGGAAGCC 2514
| ||| ||||||| | ||||||| || ||| | || |||| |||||||| || |||||
Sbjct 2512 CTTCGTCTAAACAG--G-AGGAATACAAGTTCCGTGAATATGAGAGTGAAGCTG-AAGCC 2567
Query 2515 ATGAAAGCTAAGTGTGTTTGTTTTTCAATGCAATCTCATaaaaaaaCAATAGCCACTTGA 2574
||||||||||||||||| ||||| || |||||||||||||||||| | || |||||||||
Sbjct 2568 ATGAAAGCTAAGTGTGTCTGTTTCTCGATGCAATCTCATAAAAAACCGATTGCCACTTGA 2627
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106043242080
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5