BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G32660.1
Length=2355
Score E
Sequences producing significant alignments: (Bits) Value
Ahg933837 jgi|Araly1|933837|scaffold_401825.1 2667 0.0
Ahg482243 jgi|Araly1|482243|fgenesh2_kg.4__1303__AT2G33050.1 808 0.0
> Ahg933837 jgi|Araly1|933837|scaffold_401825.1
Length=1807
Score = 2667 bits (1444), Expect = 0.0
Identities = 1695/1816 (93%), Gaps = 18/1816 (1%)
Strand=Plus/Plus
Query 427 TACCTTCTTCTTTTTTCACCATGCCTTTCTTGTCTTATCTTGATTTAAGTGAGAATCATC 486
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1 TACCTTCTTCTTTCTTCACCATGCCTTTCTTGTCTTATCTTGATTTGAGTGAGAATCATC 60
Query 487 TCACTGGCTCATTTGAAATCTCTAATTCTTCGTCTAAA-CTTGAGAACTTAAATCTTGGG 545
|||||||||||||||||||||||||||||||||| ||| || ||| |||| | ||||||
Sbjct 61 TCACTGGCTCATTTGAAATCTCTAATTCTTCGTC-AAAGCTCAAGATCTTAGAGCTTGGG 119
Query 546 AATAACCATTTTGAAACAGAGATCATAGATCCTGTTTTGAGGTTAGTTAATCTCAGGTAT 605
|||||||| |||||| |||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 120 AATAACCAATTTGAAGCAGAGATCATAGATCCTGTTTTGAAGTTAGTTAATCTCACGTAT 179
Query 606 CTAAGCCTCTCTTTCCTAAACACAAGCCACCCAATTGACTTATCAATTTTCTCTCCTCT- 664
||||||||||| |||||||||| |||||| |||||||||||||||||||||||| ||||
Sbjct 180 CTAAGCCTCTCGTTCCTAAACATAAGCCATCCAATTGACTTATCAATTTTCTCTTCTCTC 239
Query 665 CCAGTCTTTGACACACCTTGATCTTCACGGCAACAGTTTAACACTAACGAGTGTGTATTC 724
||| |||||| || ||||||||||| | |||||||||||||||| |||||||||| ||||
Sbjct 240 CCA-TCTTTGTCATACCTTGATCTTAAAGGCAACAGTTTAACACCAACGAGTGTGAATTC 298
Query 725 AGACATTGACTT-TCCAAAGAACATGGAGATCTTGCTCTTGTCTGGATGCAACATCAGTG 783
|||||| || || | |||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 299 AGACATCGAATTGT-CAAAGAACATGGAGATCTTGCTCTTGTCGGGATGCAACATCAGCG 357
Query 784 AATTCCCCAGATTCTTAAAGTCCTTAAAGAAGTTATGGTATTTAGATCTTTCCAGCAACA 843
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 358 AATTCCCCAGATTCTTGAAGTCCTTAAAGAAGTTGTGGTATTTAGATCTTTCCAGCAACA 417
Query 844 GAATCAAAGGAAACGTTCCTGATTGGATATGGAGTCTTCCTCTTTTAGTCTCTCTGGATC 903
|||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 418 GAATCAAAGGGAACGTCCCTGATTGGTTATGGAGTCTCCCTCTTTTAGTCTCTCTGGATC 477
Query 904 TTAGTAACAATTCATTCACCGGTTTC-AACGGTTCATTGGATCATGTTTTAGCCAACTCA 962
|||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct 478 TTAGTAACAATTCATTCACCGGTTTCGAA-GGTTCATTGGATCATGTTTTAGCCAATTCA 536
Query 963 TCGGTCCAAGTACTAGATATTGCTTTAAACTCTTTCAAAGGATCATTCCCTAATCCACCG 1022
|||| || ||| |||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 537 GCGGTGCAGGTATTAGATATTGCTTTAAACTCTTTCAAAGGTTCAATCCCTAATCCACCG 596
Query 1023 GTCTCTATCATCAACTTGTCTGCTTGGAACAATAGTTTCACAGGAGACATTCCTCTCTCG 1082
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 597 GTCTCTATCATCAACTTGTCTGCCTGGAACAATAGTTTCACAGGAGACATTCCTCTCTCA 656
Query 1083 GTCTGTAACAGAACCTCTCTTGATGTTCTTGATCTGTCCTACAACAACTTCACTGGCTCA 1142
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 GTCTGTAACCGAACCTCTCTTGATGTTCTTGATCTGTCCTACAACAACTTCACTGGCTCA 716
Query 1143 ATTCCTCCATGTATGGGTAATTTCACCATAGTGAATCTCCGGAAGAACAAGTTGGAAGGA 1202
||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct 717 ATTCCTCCATGTATGGGCAATTTCACCATAGTCAATCTCCGGAAAAACAAGTTGGAAGGA 776
Query 1203 AACATTCCAGACGAGTTTTATAGCGGTGCTTTGACGCAGACACTTGATGTTGGATACAAT 1262
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 777 AACATTCCAGACGACTTTTATAGCGGTGCTTTGACACAGACACTTGATGTTGGATACAAT 836
Query 1263 CAACTAACCGGAGAA-CTTCCAAGATCTCTCCTGAATTGCTCAT-TCATAAGGTTTCTTA 1320
||||||||||| ||| ||||||| ||||||||||||||| || | || |||||||||| |
Sbjct 837 CAACTAACCGG-GAAGCTTCCAAAATCTCTCCTGAATTGTTC-TCTCCTAAGGTTTCTAA 894
Query 1321 GTGTGGATCACAACAGAATCAATGATTCATTTCCCTTGTGGCTCAAGGCATTGCCCAATT 1380
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 895 GTGTGGATCACAACAAAATCAATGATTCATTTCCCTTCTGGCTCAAGGCATTGCCAAATT 954
Query 1381 TGAAAGTCCTTACTCTCCGTTCAAACAGTTTCCATGGTCCTATGTCTCCACCAGATGATC 1440
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 955 TGAAAGTCCTTACTCTCCGTTCAAACAGATTCCATGGTCCTATATCTCCACCAGATGATC 1014
Query 1441 AAAGTTCTCTTGCATTTCCCAAGCTCCAGATACTTGAAATATCGCATAACAGATTTACGG 1500
|| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1015 AAGGTCCTCTTGCATTTCCCAAGCTCCAGATACTTGAAATATCGCATAACACATTTACCG 1074
Query 1501 GAAGCTTACCAACGAATTACTTTGCGAATTGGAGTGTAAAATCTCTCAAGATGTATGATG 1560
||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1075 GAAGCTTACCAACAAATTACTTTGCGAATTGGAGTGTAACATCTCACAAGATGTATGATG 1134
Query 1561 AAGAGAGGCTATATATGGGAGACTATTCGAGTGATCGGTTTGTTTATGAAGATACTTTGG 1620
|||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||
Sbjct 1135 AAGAGAGGCTATATATGGGAGACTATTCGAGTGACCGGTTTGCCTATGACGATACATTGG 1194
Query 1621 ATTTGCAATACAAAGGTCTATACATGGAGCAAGGCAAGGTTCTTACTTTCTACTCCGCCA 1680
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1195 ATTTACAATACAAAGGTCTATACATGGAGCAAGGCAAGGTTCTTACTTTCTACGCCGCCA 1254
Query 1681 TTGATTTCTCTGGCAACAAGCTTGAAGGAGAGATTCCAGAATCTATTGGTCTTTTGAAAA 1740
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 TTGATTTCTCTGGAAACAAACTTGAAGGAGAGATTCCAGAATCTATTGGTCTTTTGAAAA 1314
Query 1741 CATTGATTGCTCTCAACTTATCAAACAACTCATTCACTGG-ACATATTCCGATGTCTTTC 1799
||||||||||||||||||||||||||||||||||||| || ||| || ||||||||||||
Sbjct 1315 CATTGATTGCTCTCAACTTATCAAACAACTCATTCAC-GGCACACATCCCGATGTCTTTC 1373
Query 1800 GCTAATGTGACAGAGCTCGAGTCATTGGACTTGTCAGGGAACAAACTCTCGGGGGAAATT 1859
|| |||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||||
Sbjct 1374 GCCAATGTGACTGAGCTCGAGTCATTAGACCTGTCAGGGAACAAACTCTCGGGAGAAATT 1433
Query 1860 CCACAAGAACTCGGAAGACTATCGTATTTAGCGTACATAGATGTCTCTGATAATCAACTC 1919
||||||||||| || |||||||||||||| |||||||||||| ||||||||||||| |||
Sbjct 1434 CCACAAGAACTTGGGAGACTATCGTATTTGGCGTACATAGATCTCTCTGATAATCAGCTC 1493
Query 1920 ACTGGTAAAATACCACAAGGAACACAAATCATAGGGCAGCCTAAATCCTCATTTGAAGGA 1979
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1494 ACTGGTGAAATACCACAAGGAACACAAATAATAGGGCAGCCTAAATCCTCATTTGAAGGG 1553
Query 1980 AATTCAGGGTTATGTGGTCTTCCTCTTGAAGAAAGCTGTTTAAGAGAAGACGCACCATCG 2039
|||||||||||||||||||| |||||||||||||||||||| || ||||||||||| |||
Sbjct 1554 AATTCAGGGTTATGTGGTCTCCCTCTTGAAGAAAGCTGTTTTAGCGAAGACGCACCTTCG 1613
Query 2040 ACACAAGAGCCCgaagaagaagaagaagaaATATTGGAGTGGAGAGCAGCGGCAATAGGG 2099
||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||
Sbjct 1614 ACACAAGAGCCCGAAGAAGAAGAAGAA-A--TATTGAACTGGAGAGCAGCGGCAATAGGG 1670
Query 2100 TATGGACCAGGGGTGTTGTTTGGATTGGCAATTGGACATGTTGTTGCTTTGTACAAGCCA 2159
||||||||||| ||||||||||||| ||||| || ||||||||| ||||||||||||||
Sbjct 1671 TATGGACCAGGACTGTTGTTTGGATTAGCAATAGGTCATGTTGTTTCTTTGTACAAGCCA 1730
Query 2160 GGGTGGTTCATCAAGAATAATGGTCAGAATAGGCTTAGAGGCATCAGACACCCTTAGGAT 2219
||||||||| |||||||| |||||||||||||||| |||||||| |||||||||||||||
Sbjct 1731 GGGTGGTTCGTCAAGAATTATGGTCAGAATAGGCTCAGAGGCATTAGACACCCTTAGGAT 1790
Query 2220 TAAAATTGTTCTGTTT 2235
||| |||||||||||
Sbjct 1791 TAAT-TTGTTCTGTTT 1805
> Ahg482243 jgi|Araly1|482243|fgenesh2_kg.4__1303__AT2G33050.1
Length=2481
Score = 808 bits (437), Expect = 0.0
Identities = 1520/2020 (75%), Gaps = 166/2020 (8%)
Strand=Plus/Plus
Query 69 GATAACACGACCGGTGCGGTCACG--G-TTCTAGAACTCCCCGGTGGATG-TTTACGTGG 124
||||||||||| |||||||||||| | ||| || ||||| |||| || || || |||
Sbjct 166 GATAACACGACTGGTGCGGTCACGAAGCTTC-AG--CTCCCAAGTGGTTGCTTCAC-TGG 221
Query 125 CA-CTCTCAGACCAAACAGTAGCCTCTTTGAGCT-AAGTCATCTCCGTTACCTAAACCTC 182
| |||||| |||||| ||||| ||||| ||| | | ||| || |||||||| || |||
Sbjct 222 -ACCTCTCAAACCAAATAGTAGTCTCTTCGAGTTGCA-TCAGCTTCGTTACCTTAATCTC 279
Query 183 TCTTTCAACAACTTCGA-TTCTTC-TCCCTTGTCC-TCTGCTTTTGGTC-AGCTCAACA- 237
||| |||||||||| | ||| || || | | || || | || | | | |||||||
Sbjct 280 TCTCACAACAACTTC-ACTTCCTCTTCAC-T-CCCTTCAGAATTCAG-CAATCTCAACAG 335
Query 238 ATCTAGAGGTCTTGCT-TCTAT-CCTCTAATGGCTTCACTGGCCAAGTTCCTTCTTCTA- 294
|| ||||||| ||| | ||| | |||||| | |||| ||||| ||| ||||||| || |
Sbjct 336 AT-TAGAGGTTTTG-TCTCT-TGCCTCTAGTAGCTTTACTGGTCAATTTCCTTCCTCAAT 392
Query 295 TACGTAACCTAACCAAACTTACCCAATTAAATCTTCCCCACAACAAGCTCACCGGTGA-T 353
|| ||||||| | | ||||| || ||||| ||| |||| || ||||||| ||| | |
Sbjct 393 TA-GTAACCTTATCTTGCTTACACACTTAAACCTTTCCCATAATGAGCTCACTGGT-AGT 450
Query 354 TTACCCTCACTTGTACAG-AATCTAACCAAGCTTTTAGCTT-TAGACCTTTCTTATAATC 411
|| || |||||||| || || ||||| |||| ||| | || ||||||||||||| ||||
Sbjct 451 TT--CC-CACTTGTA-AGAAACCTAACAAAGC-TTTCGTTTCTAGACCTTTCTTACAATC 505
Query 412 AATTCTCTGGAACCATACCTTCTTCTTT--T-TTCACCATGCCTTTCTTGTCTTATCTTG 468
| ||||| ||| || |||||||| ||| | ||| |||||||||||||||||||||
Sbjct 506 AGTTCTCAGGAGCCGTACCTTCTGATTTACTACCCACTTTGCCTTTCTTGTCTTATCTTG 565
Query 469 ATTT-AAGTGAGAATCATCTCACTGGCTC-ATT--TG----AAATCTCTAATTCTTCGTC 520
|||| || |||||||||| ||||| || ||| || || |||| |||||| ||
Sbjct 566 ATTTGAA-AAAGAATCATCTTACTGGTTCTATTGATGTTCCCAA-CTCTTCTTCTTCATC 623
Query 521 TAAACTTGAGAACTTAAATCTTGGGAATAACCATTTTGAA--ACAGAGATCATAGATCCT 578
||| || | | || |||||| ||||||| || ||| ||| | ||| |||| |||
Sbjct 624 TAAGCTAGTGCGTTTGTCCCTTGGGTATAACCAATTCGAAGGACA-A-ATCCTAGAGCCT 681
Query 579 GT-TTTGAGGTTAGTTAATCTCAGGTATC-T-AAGCCTCT-CTTTCCTAAACACAAGCCA 634
| | || | | | || |||| |||| | || || | ||| |||||||| ||| |
Sbjct 682 ATCTCAAAGCTCA-TCAACCTCAACTATCTTGAA--CT-TGCTTCCCTAAACATAAGTTA 737
Query 635 CCCAATTGACTTATC-AATTTTCTCTCCTCTCCAGTCTTTGACACACCTTGATCTTCACG 693
||||||||||||| | | |||||||||||| | |||||| | ||||| |||
Sbjct 738 CCCAATTGACTTA-CGGGTCTTCTCTCCTCTCAAATCTTTGTTGGTCTTTGATATTCGTA 796
Query 694 GCAACAGTTTAACACTAACGAGTGTGT-A-TTCAGACATT--GACTTTCCAAAGAACAT- 748
|| || ||| || | | ||| | | | ||||| ||| || ||| | || | |
Sbjct 797 AAAATAGGTTATTACCAGCCAGT-T-TAAGTTCAG--ATTCAGAGATTCTATTGAGCTTA 852
Query 749 GGAGATCTTGCTCTTGTCTGGA-TGCAACATCAGT-GA-ATTCCCCAGATTCTTAAAG-T 804
| | | | || | ||| || | ||| |||| | | || |||| | | ||||||||
Sbjct 853 GTA-AGCCTGATTTTG-GTGCAGTGCGACATGA-TCGAGTTTCCAAACA-TCTTAAAGAC 908
Query 805 CCTTAAAGAAGTTATG-GTATTTAGATC-TTTCCAGCAA-CAGAATCAAA-GGAAACGTT 860
|||| || || ||| | | || |||| | |||||| ||| | ||||||| ||||| ||
Sbjct 909 CCTTCAA-AACTTA-GAGCATATAGA-CATTTCCAACAATC-TAATCAAAGGGAAA-GTA 963
Query 861 CCTGATTGGATATGG-AGTCTTCCTC-TTTTAGTC-TCTCTGGATCTTAG-TAACAATTC 916
||||| ||| | ||| || ||||||| | |||| | | | | ||||| | |||||||||
Sbjct 964 CCTGAGTGGTTTTGGAAG-CTTCCTCGTCTTAG-CATAGC-GAATCTT-GTTAACAATTC 1019
Query 917 ATTCACCGGTTTC-AACGGTTCATTGGATCATGTTTTAGC-CAACTCATCGGTCCAAG-T 973
|| ||||||||| || ||||| || | | || ||| | |||||||| || | || |
Sbjct 1020 TTTTACCGGTTTCGAA-GGTTC-TT-CA-GAAGTGTTA-CTTAACTCATCAGTGC-AGTT 1073
Query 974 ACTAGATATTG-CTTTAAACTCTTTCAAAGGATCATTCCCTAATCCACCGGTCTCTA-T- 1030
||||||||||| || | ||||| | | |||| | || |||| |||||| ||| | |
Sbjct 1074 ACTAGATATTGCCTAT-AACTCCATGACAGGAGCGTTTCCTATTCCACC--ACTCAATTC 1130
Query 1031 CATCAACTTGTCTGCTTGGAACAATAGTTTCACA-GGAGACATTCCTCTCTCGGTCTGTA 1089
|||| |||||||||| |||||||||||||||||| ||| |||| |||||||| |||| |
Sbjct 1131 CATCTACTTGTCTGCGTGGAACAATAGTTTCACAGGGA-ACATACCTCTCTCAATCTGCA 1189
Query 1090 ACAGAACCTCTCTTGAT-GTTCTTGATCTGTCCTACAACAACTTCACTGGCT-CAATTCC 1147
|| ||| |||||| | | || |||||||| ||||||||||||||||| || | |||||||
Sbjct 1190 ACCGAAGCTCTCTCG-TCGTCCTTGATCTATCCTACAACAACTTCACCGG-TCCAATTCC 1247
Query 1148 TCCATGTATGGGTAATTTCACCA-TAGTGAATCTCCGGAAGAACAAG-TTGGAAGGAAAC 1205
|| |||| | |||| || | | |||||||||| |||||||| || ||||||||||
Sbjct 1248 TCAATGTCTAAGTAACTT-AAAAGTAGTGAATCTGAGGAAGAAC-AGCTTGGAAGGAAGT 1305
Query 1206 ATTCCAGACGAGTTTTATAGCGGTGCTTTGACGCAGACACTTGATGTTGGATACAATCAA 1265
|| || |||||||| || || ||||||||||| ||||| ||||| ||||| ||||||| |
Sbjct 1306 ATACCTGACGAGTTCTACAGAGGTGCTTTGACACAGACGCTTGACGTTGGCTACAATCGA 1365
Query 1266 CTAACCGGAGAA-CTTCCAAGATCTCTCCTGAATTGCT-CATTCAT-AAGGTTTCTTAGT 1322
|||||||| ||| |||||| ||| || | ||||||| | ||| | || |||||| |||
Sbjct 1366 CTAACCGG-GAAGATTCCAAAATCACTTTTAAATTGCTCCTTTC-TGAA-GTTTCTGAGT 1422
Query 1323 GTGGATC-ACAACAGAA-TCAATGATTCATTTCCCTTGTGGCTCAAGGCATTGCCCAATT 1380
|| || | ||||||||| | || || | ||||| || ||||| ||||| | |||||||
Sbjct 1423 GTTGA-CAACAACAGAATTGAA-GACACGTTTCCTTTCTGGCTGAAGGCGCTACCCAATT 1480
Query 1381 TGAAAGTCCTTACTCTCCGTTCAAACAGTTTCCAT-GGTCCTATGTCTCCACCAGATGAT 1439
|| | ||| ||||||||||||||||||| || | | || || || ||| | || ||||
Sbjct 1481 TGCATGTCTTTACTCTCCGTTCAAACAGATT-CTTCGG-CC-ATCTCT-CTCCTCCTGAT 1536
Query 1440 CAAAGTTCTCTTGCATTTCCCAAGCTCCAGATACTTGAAATATCGCATAACAGATTTACG 1499
| | || |||| |||||||| |||| | |||||||||| | ||| ||||||| |||||
Sbjct 1537 CGAGGTCCTCTCGCATTTCCTGAGCTGCGGATACTTGAATTGTCGGATAACAGCTTTACC 1596
Query 1500 GGAAGCTTACCAACGAA-TTACTTTGCGAATTGGAGTGTAAAATCTCTCAAGATGTATGA 1558
|||||||| || || || || ||||| || |||| | | ||| |||||| || |
Sbjct 1597 GGAAGCTTGCC-ACCAAGTTTCTTTGTTAACTGGAAAGCATCATCAGTCAAGA--TA-AA 1652
Query 1559 TGAAGA-GAGGC-TA--TATATGGGAGACTATTCGAGTGATCGGTT-TGTTTATGAAGAT 1613
|||||| | ||| || |||||||||||||| || || | || | | ||||||||
Sbjct 1653 TGAAGATG-GGCGTATGTATATGGGAGACTACAAGAATGCT-TATTATATCTATGAAGAC 1710
Query 1614 ACTTTGGATTTGCAATACAAAGGTCTATACATGGAGCAAGGCAAGGTTCTTACTTTCTAC 1673
|||||||||||||||||||||||||||| ||||||||| || || || ||||||| ||||
Sbjct 1711 ACTTTGGATTTGCAATACAAAGGTCTATTCATGGAGCAGGGGAAAGTCCTTACTTCCTAC 1770
Query 1674 TCCGCCATTGATTTCTCTGGCAACAAGCTTGAAGGAGAGATTCCAGAATCTATTGGTCTT 1733
| |||||||||||||||| ||||| ||||||||| ||||||| || || ||||||||
Sbjct 1771 AGCACCATTGATTTCTCTGGAAACAAACTTGAAGGACAGATTCCTGAGTCCATTGGTCTG 1830
Query 1734 TTGAAA-ACATTGATTGCTCTCAACTTATCAAACAACTCATTCACTGGACATATTCCGAT 1792
||||| | ||||||||| ||||||||||| |||||| | || ||||| |||||||| ||
Sbjct 1831 TTGAAGGA-ATTGATTGCGCTCAACTTATCGAACAACGCCTTTACTGGCCATATTCCTAT 1889
Query 1793 GTCTTTCGCTAATGTGACAGAGCTCGAGTCATTGGACTTGTCAGGGAACAAACTCTCGGG 1852
|||||| || ||||| || ||||| |||||| | ||| ||||| | ||| |||| || ||
Sbjct 1890 GTCTTTGGCAAATGTTACGGAGCTTGAGTCACTAGACCTGTCAAGAAACCAACTATCAGG 1949
Query 1853 GGAA-ATTCC-ACAAGAACTCGGAAGACTATCGTATTTAGCGTACATA-GATGTCTCTGA 1909
| || ||||| | | ||||||||||| || |||| ||| |||||| || | ||| || |
Sbjct 1950 G-AATATTCCTAGA-GAACTCGGAAGCCTTTCGTTTTTGGCGTACGTAAG-TGTGGCTCA 2006
Query 1910 TAATCAACTCACTGGTAAAATACCACAAGGAACACAAATCA-TAGGGCA-GCCTAAATCC 1967
||| ||||||| ||| |||||||||||||| |||| | | | ||||| || | ||||
Sbjct 2007 TAACCAACTCAAAGGTGAAATACCACAAGGACCACAGTTTAGT-GGGCAAGC-TGAATCA 2064
Query 1968 TCATTTGAAGGAAAT-TCAGGGT-TATGTGGTCTTCCTCT 2005
||||||||||| ||| | ||| | ||||||||||||||||
Sbjct 2065 TCATTTGAAGGGAATGT-AGG-TCTATGTGGTCTTCCTCT 2102
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88712180605
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5