BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT2G32800.1

Length=2728
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg933857 jgi|Araly1|933857|scaffold_401845.1                       3956    0.0  
  Ahg925104 jgi|Araly1|925104|scaffold_200665.1                        357    2e-97
  Ahg907512 jgi|Araly1|907512|Al_scaffold_0002_593                     340    2e-92


> Ahg933857 jgi|Araly1|933857|scaffold_401845.1
Length=2613

 Score = 3956 bits (2142),  Expect = 0.0
 Identities = 2452/2601 (94%), Gaps = 23/2601 (1%)
 Strand=Plus/Plus

Query  4     TTTCGATATCTTTACACATTCACATGGCGCCAATGGCTATGGATCATCTCTGTTTCGTAC  63
             ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  1     TTTCGATA--TTTACACATTCACATGGCGCCAATGGCTATGGATCGTCTCTGTTTCGTAC  58

Query  64    TACCGACAGAATCCGGCGAGTT-AAA--G-C--C-----A----CCGGTGATGGTCGAGG  108
             | || ||||||||||||||||| |||  | |  |     |    |||| ||||||||| |
Sbjct  59    TTCCTACAGAATCCGGCGAGTTAAAACCGCCGTCGTTAAAGTCTCCGGCGATGGTCGAAG  118

Query  109   AGACCACagaagaagaagaggagaagaagaGTCGTGATTGTGGACGTCAAGTTGTGAGTT  168
             |||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct  119   AGACTAAAGAAGAAGAAGAGGAGAAGAAGAGTCGTGATTGTGGACGTCAAGTTGTGAATT  178

Query  169   TAATCGGAGATTTATTCCGGCGATTACACGGCT-CTAAGTTGGTGAAGAGCTTGAATCTC  227
             | ||||||||||||||||||||||||||||||| | || || |||||||||||| |||| 
Sbjct  179   TGATCGGAGATTTATTCCGGCGATTACACGGCTCCAAAATT-GTGAAGAGCTTGTATCTT  237

Query  228   TGTAGTATCAACGAGAGTAAAGATTCGATTTCAATGGAGATCAATAAATCATTCACTGAC  287
             ||||||||||||||| ||||||||| ||||||||||||||| |||||||| |||||||||
Sbjct  238   TGTAGTATCAACGAGTGTAAAGATTTGATTTCAATGGAGATTAATAAATCTTTCACTGAC  297

Query  288   ATGGAAGGTGTTCAGCTTTCCAGCAAAGTCGGTTGCGAGAATCCAAGAATCTTTGGATAC  347
             |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  298   ATGGAAGGTGTTCAACTTTCAAGCAAAGTCGGTTGCGAGAATCCAAGAATCTTTGGATAC  357

Query  348   TCTGAGCTTTATATCGGAACTAATGGTTTCAGCGACGAACTGATCCTCGGAAGCGGCGGT  407
             ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct  358   TCTGAGCTTTACATCGGAACTAACGGTTTCAGCGACGAACTGATCCTCGGAAGCGGTGGT  417

Query  408   TTCGGCCGCGTTTACAAGGCGTTGTTACCGAGCGACGGAACCACCGTGGCTGTTAAATGC  467
             |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct  418   TTCGGCCGTGTTTACAAGGCGGTGTTACCGAGCGACGGAACCACCGTGGCTGTTAAATGC  477

Query  468   TTGGCGGAGAAGAAAGGAGAACAATTCGAGAAAACTTTCGCGGCGGAGCTTGTTGCGGTG  527
             |||||||||||||||||||| || || ||||||||||||||||||||||||||||| |||
Sbjct  478   TTGGCGGAGAAGAAAGGAGAGCAGTTTGAGAAAACTTTCGCGGCGGAGCTTGTTGCCGTG  537

Query  528   GCTCAGCTCCGCCATCGAAATCTTGTGAAGTTAAGAGGTTGGTGTCTACACGAAGACGAG  587
             ||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||||
Sbjct  538   GCTCAGCTCCGGCATCGGAATCTTGTGAAGCTAAGAGGCTGGTGTCTACACGAAGACGAG  597

Query  588   TTGCTTCTTGTTTACGATTACATGCCTAACCGGAGCTTAGATCGTGTGCTTTTCCGACGA  647
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  598   TTGCTTCTTGTTTACGATTACATGCCTAACCGGAGCTTAGATCGTGTGCTTTTCCGACGA  657

Query  648   CCGGAAGTTAACTCCGATTTTAAACCGTTGGATTGGGATCGGAGGGGTAAAATCGTCAAA  707
             ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  658   CCGGAAGCTAACTCAGATTTTAAACCGTTGGATTGGGATCGGAGGGGTAAAATCGTCAAA  717

Query  708   GGACTCGCCGCCGCGTTGTTCTACCTCCACGAGCAGTTAGAGACTCAGATCATTCACAGA  767
             |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct  718   GGACTCGCCGCCGCGTTGTTCTACCTTCACGAGCAGTTAGAGACTCAGATTATTCACAGA  777

Query  768   GATGTGAAGACGAGTAACGTTATGTTGGATTCTGAGTTTAACGCTAAACTCGGAGATTTT  827
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  778   GATGTGAAGACGAGTAACGTTATGTTGGATTCTGAGTTTAACGCTAAACTCGGAGACTTT  837

Query  828   GGTTTAGCTCGGTGGTTAGAACACAAGATTGATGAAACAGAGCATGATTCGAGTTACGAC  887
             || || ||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct  838   GGATTGGCTCGGTGGTTAGAACACAAGATTGATGAAACAGAGCCTGATTCAAGTTACGAC  897

Query  888   TCTGTTTCTTCCTTCCGTAACCACCAGTTCCGAGTCGCGGATTCGACTCGGATCGGTGGG  947
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct  898   TCTGTTTCTTCCTTCCGTAACCACCAGTTCCGAGTCGCGGATTCGACCCGGATCGGTGGT  957

Query  948   ACTATCGGGTACTTACCACCGGAGAGTTTCCGGaaaaaaaCCGTTGCCACCGCTAAAACA  1007
             |||||||||||||| || || |||||||| |||||||||||||| |||||||||||||||
Sbjct  958   ACTATCGGGTACTTGCCGCCTGAGAGTTTTCGGAAAAAAACCGTCGCCACCGCTAAAACA  1017

Query  1008  GATGTTTTCAGCTTTGGTGTTGTGGTTTTAGAGGTTGTCTCCGGTAGACGAGCCGTTGAT  1067
             |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct  1018  GATGTTTTCAGCTTCGGTGTTGTGGTTTTAGAGATTGTCTCTGGTAGACGAGCCGTTGAT  1077

Query  1068  CTTTCGTTCTCGGAAGATAAAATCATTTTACTTGATTGGGTTCGGAGATTATCCGATAAC  1127
             ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct  1078  CTTTCGTTCTCTGAAGATAAAATCATTTTGCTTGATTGGGTTCGGAGGTTATCCGATAAC  1137

Query  1128  CGGAAATTACTCGACGCCGGGGATTCTCGGTTAGC-AAAAGGATCTTATGATCTCTCTGA  1186
             ||||||||||||||||| || |||||||||||| | |||||| ||||| |||  ||||||
Sbjct  1138  CGGAAATTACTCGACGCTGGAGATTCTCGGTTA-CTAAAAGGGTCTTACGATAACTCTGA  1196

Query  1187  TATGAAGAGAATGATTCATCTTGCTCTGCTCTGTTCTTTAAACAATCCAACGCATCGTCC  1246
             |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct  1197  TATGAAGAGAATGATTCATCTTGCTCTGCTCTGTTCGTTAAACAACCCAACGCATCGTCC  1256

Query  1247  CAACATGAAATGGGTTATCGGAGCACTTTCCGGCGAGTTTTCCGGTAACTTACCGGCGTT  1306
             ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct  1257  CAACATGAAATGGGTGATCGGAGCACTTTCCGGGGAGTTTTCCGGTAACTTACCGGCGTT  1316

Query  1307  ACCTTCGTTTAAGAGCCATCCTCTTTATATTCCTTTATCTTCTTTAAAATCAACCTCAAC  1366
             ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct  1317  ACCTTCGTTTAAGAGCCATCCTCTTTATATTCCTTTATCTTCTCTAAAATCAACTTCAAC  1376

Query  1367  TTCGGCGACTACGACTACTACAAGAACAACGATGACCACCACCACCTCCACAACTAGCTT  1426
             ||||||||| ||||| || ||||||||||||| ||||||||||||||| |||||||||||
Sbjct  1377  TTCGGCGACGACGACGACCACAAGAACAACGACGACCACCACCACCTCAACAACTAGCTT  1436

Query  1427  CAATGCGTCGTCGGAGTCAACGCCGTCATCAAATTACGTTACTGCCCTTGAGGATTCTAT  1486
             ||| ||||| || |||||||| || || ||||||||||||||||||||||||||||| ||
Sbjct  1437  CAACGCGTCTTCCGAGTCAACACCCTCGTCAAATTACGTTACTGCCCTTGAGGATTCCAT  1496

Query  1487  TTACCAGACGGCGGAGACTGGAGAAAATCCGTACTTTAATTACAACAGCCGGAGAGTGAT  1546
             ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||| 
Sbjct  1497  TTACCAGACGGCGGAGACTGGAGAAAATCGGTACTTCAACTACAACAGCCGGAGAGTGAC  1556

Query  1547  GTCATCAAAGTCTTTCGTATTGGACACGCCAAGAGAGATTTCATACAACGACCTTGTTTT  1606
             ||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct  1557  GTCGTCAAAGTCTTTCGTATTGGACACGCCAAGGGAGATTTCATACAACGACCTCGTTTT  1616

Query  1607  AGCCACTGATAATTTCTCTGATGCACGTCGCGTTGCTGAGGTTGATTTTGGTACGGCTTA  1666
             |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||
Sbjct  1617  AGCCACTGATAATTTCTCCGATGCTCGTCGCGTTGCTGAGGTTGATTTCGGTACGGCTTA  1676

Query  1667  TTATGGTTTACTAAATGGAGACCAACATATTGTGGTGAAACGTCTCGGTATGACTAAATG  1726
             |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1677  TTATGGTTTACTCAACGGAGACCAACATATTGTGGTGAAACGTCTCGGTATGACTAAATG  1736

Query  1727  TCCGGCGCTTGTTACCCGGTTCTCCACTGAACTACTTAACCTAGGCCGGCTTCGACACCG  1786
             ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct  1737  TCCGGCGCTTGTTACACGGTTCTCCACGGAACTACTTAACCTAGGCCGGCTTCGACATCG  1796

Query  1787  TAACCTAGTAATGCTCCGTGGTTGGTGCACCGAACACGGAGAAATGCTTGTAGTGTACGA  1846
             ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||
Sbjct  1797  TAACCTAGTTATGCTCCGTGGATGGTGCACAGAACACGGAGAAATGCTTGTAGTATACGA  1856

Query  1847  TTATTCCGCGAATCGTAAGCTAAGTCATCTTCTTTTCCATAATCATATACCTGGAAACTC  1906
             |||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct  1857  TTATTCCGCGAATCGTAAGCTAAGTCATCTTCTTTTCCATAACCATATACCGGGGAACTC  1916

Query  1907  TGTTTTGCGATGGAAAAGTCGGTACAACGTGATCAAATCGCTTGCTTGCGCTGTACGTTA  1966
             ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct  1917  TGTTTTGCGATGGAAAAGTCGGTACAACGTGATAAAATCGCTTGCTTGCGCAGTACGATA  1976

Query  1967  TCTCCACGAGGAATGGGACGAACAAGTCATTCACCGAAACATTACTTCTTCAACTATATT  2026
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1977  CCTCCACGAGGAATGGGACGAACAAGTCATTCACCGAAACATTACTTCTTCAACTATATT  2036

Query  2027  TCTTGATAGAGATATGAATCCGCGGCTTTGCGGATTCGCATTGGCAGAGTTTTTGTCTAG  2086
             |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  2037  TCTTGATAGAGACATGAATCCGCGGCTCTGCGGATTCGCATTGGCAGAGTTTTTGTCTAG  2096

Query  2087  AAACGACAAGGCTCATCAAGCTGCAAAAAAGAAAGGATCTGCTCAAGGGATTTTTGGTTA  2146
             ||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |||||
Sbjct  2097  AAACGACAAAGCTCATCAAGCTACAAAAAAGAAAGGATCCGCTCAAGGGATTTTCGGTTA  2156

Query  2147  TATGGCACCAGAATACATGGAATCCGGCGAGGCTACAACCATGGCGGATGTATACAGCTT  2206
             ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||
Sbjct  2157  TATGGCACCAGAATATATGGAATCAGGCGAGGCTACAACCATGGCTGATGTATACAGCTT  2216

Query  2207  TGGCGTGGTAGTGCTCGAGATGGTTACGGGGCAGCCAGCAGTGGATTACAAGAGGAAAAA  2266
              ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  2217  CGGCGTCGTGGTGCTCGAGATGGTTACGGGGCAGCCCGCAGTGGATTACAAGAGGAAAAA  2276

Query  2267  AGAAGATGCTCTTATGGTGTTGCGAATCCGCGAAGTAGTTGGTAACC-GaaaaaaaCTCT  2325
             ||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||
Sbjct  2277  AGAAGATGCTCTTTTGGTGTTGAGAATCCGCGAAGTAGTTGGTAACCGGAAAAAAA-TCT  2335

Query  2326  TGGAGGAGATTGCAGATATTCATTTGGATGATGAATACGAGAATCGAGAATTGGCAAGGC  2385
             ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct  2336  TGGAGGAGATTGCAGATATTCATTTGGATGACGAGTACGAGAATCGAGAATTGGCAAGGC  2395

Query  2386  TATTACGGTTAGGGTTAGTTTGCACGAGAACCGATCCGAAGTTAAGGCCTAGCATTAGCC  2445
             |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct  2396  TATTACGGTTAGGGTTGGTTTGCACGCGAACCGATCCGAAGTTAAGGCCTAGCATTAGCC  2455

Query  2446  AAGTGGTGAGTATATTGGATGGAAGCGAGAGGTTCTTCGAAGAGGAAGGAGGAAAGGAAG  2505
             |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct  2456  AAGTTGTGAGTATATTGGATGGAAGCGAGAGGTTCTTTGAAGAGGAAGGAGGAAAGGAAG  2515

Query  2506  GTGACGTTAGCCGCAAGCAAATGTATGATTCGTCTATGTTGATGATTAGACAAATGCAAG  2565
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  2516  GTGACGTTAGCCGCAAGCAAATGTATGATTCGTCTATGTTGATGATTAGACAAATGCAAG  2575

Query  2566  CGCTTGGGATCCATTGAGTAA  2586
             |||||||||| ||||||||||
Sbjct  2576  CGCTTGGGATTCATTGAGTAA  2596


> Ahg925104 jgi|Araly1|925104|scaffold_200665.1
Length=644

 Score =  357 bits (193),  Expect = 2e-97
 Identities = 275/313 (88%), Gaps = 11/313 (4%)
 Strand=Plus/Plus

Query  2028  CTTGATAGAGATATGAATCCGCGGCTTTGCGGATTCGCATTGGCAGAGTTTTTGTCTAGA  2087
             ||| ||| || ||||||||||||||| || ||||| |||||||| |||||||||||||||
Sbjct  334   CTT-ATAAAGTTATGAATCCGCGGCTCTGTGGATTTGCATTGGCCGAGTTTTTGTCTAGA  392

Query  2088  AACGACAAGGCTCA-TCAAGCTGCAAAAAAGAAAGGATCTGCTCAAGGGATTTTTGGTTA  2146
             ||||| |||||||| ||||||| |||||||| ||||||| ||||||||||| || |||||
Sbjct  393   AACGATAAGGCTCATTCAAGCTACAAAAAAGGAAGGATCCGCTCAAGGGATCTTCGGTTA  452

Query  2147  TATGGCACCAGAATACATGGAATCCGGCGAGGCTACAACCATGGCGGATGTATACAGCTT  2206
             |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct  453   TATGGCACCAGAATACATGGAATCCGGCGAGG-TACAACCATGACGGATGTATACAGCTT  511

Query  2207  TGGCGTGGTAGTGCTCGAGATGGTTACGGGGCAGCCAGCAGTGGATTACAAGAGGAAAAA  2266
              ||| |||| ||||| |||||||||| |||||| ||   ||||||||||| |||||||||
Sbjct  512   CGGCATGGTGGTGCTGGAGATGGTTATGGGGCATCCCTTAGTGGATTACATGAGGAAAAA  571

Query  2267  AGAAGATGCTCTTATGGTGTTG-C-G---A-A-TCCGCGAAGTAGTTGGTAACCG-aaaa  2318
              |||||||||||| |||||||| | |   | | ||||||||||||||||| |||| ||||
Sbjct  572   CGAAGATGCTCTTTTGGTGTTGACTGTTGAGAATCCGCGAAGTAGTTGGTGACCGGAAAA  631

Query  2319  aaaCTCTTGGAGG  2331
             |||||||| ||||
Sbjct  632   AAACTCTTCGAGG  644


 Score =  233 bits (126),  Expect = 4e-60
 Identities = 166/185 (90%), Gaps = 4/185 (2%)
 Strand=Plus/Plus

Query  1771  GCCGGCTTCGACACCGTAACCTAGTAATGCTCC-GTGGTTGGTGCACCGAACACGGAGAA  1829
             ||||||||||||| |||||||| || |||| || |||| |||||||| ||||| ||||||
Sbjct  154   GCCGGCTTCGACATCGTAACCTTGTTATGC-CCAGTGGGTGGTGCACTGAACATGGAGAA  212

Query  1830  ATGCTTGTAGTGTACGATTATTCCGCGAATCGTAAGCTAAGTCATCTTCTTTTCCATAAT  1889
             |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| 
Sbjct  213   ATGCTTGTAGCGTACGATTATTCCGCGAATCGTAAGGTAAGCCATCTTCTTTTCCATAAC  272

Query  1890  CATATACCTG-GAAACTCTGTTTTGCGATGGAAAAGTCGGTACAACGTGATCAAATCGCT  1948
             | |||  | | |||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct  273   CGTATTTC-GAGAAACTCTGTTTTGCGATGGAAAAGTCGGTACAACGAGATTAAATCGCT  331

Query  1949  TGCTT  1953
             |||||
Sbjct  332   TGCTT  336


 Score =  195 bits (105),  Expect = 2e-48
 Identities = 143/161 (89%), Gaps = 4/161 (2%)
 Strand=Plus/Plus

Query  1379  GACTACTAC-AAGAACAACGATGACCACCACCACCTCCACAACTAGCTTCAATGCGTCGT  1437
             |||||| || || || |||||||   |||||||||||||||||||||||||| ||||| |
Sbjct  1     GACTACGACTAAAAAAAACGATG---ACCACCACCTCCACAACTAGCTTCAACGCGTCTT  57

Query  1438  CGGAGTCAACGCCGTCATCAAATTACGTTACTGCCCTTGAGGATTCTATTTACCAGACGG  1497
              |||||| |||||||| ||||| ||||||||| || |||||||||| |||||||||||||
Sbjct  58    TGGAGTCGACGCCGTCGTCAAACTACGTTACTACCGTTGAGGATTCCATTTACCAGACGG  117

Query  1498  CGGAGACTGGAGAAAATCCGTACTTTAATTACAACAGCCGG  1538
             |||||||||||||||||| |||||||||||||||| |||||
Sbjct  118   CGGAGACTGGAGAAAATCAGTACTTTAATTACAACCGCCGG  158


> Ahg907512 jgi|Araly1|907512|Al_scaffold_0002_593
Length=285

 Score =  340 bits (184),  Expect = 2e-92
 Identities = 245/273 (90%), Gaps = 9/273 (3%)
 Strand=Plus/Plus

Query  990   GTTGCCACCGCTAAAACAGATGTTTTCAGCTTTGGTGTTGTGGTTTTAGAGGTTGTCTCC  1049
             ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||| || |
Sbjct  17    GTTGCCACC-CTAAAACAGATGTTTTCAGCTTTGGTGTTGTGGTTTTTGAGATTG-CTTC  74

Query  1050  GG-TAGACGA-GCCGTTGATCTTT-CGTTCTCGGAAGATAAAATCATTTTACTTGATTGG  1106
             || ||||| | ||||||||||||| | ||||| ||||||||||||||||| |||||||||
Sbjct  75    GGGTAGAC-ATGCCGTTGATCTTTTC-TTCTCTGAAGATAAAATCATTTTGCTTGATTGG  132

Query  1107  GTTCGGAGATTATCCGATAACCGGAAATTACTCGACGCCGGGGATTCTCGGTTAGC-AAA  1165
             |||||||||||||| ||||||||||||||||||||||| || |||||||||||| | |||
Sbjct  133   GTTCGGAGATTATCTGATAACCGGAAATTACTCGACGCTGGAGATTCTCGGTTA-CTAAA  191

Query  1166  AGGATCTTATGATCTCTCTGATATGAAGAGAATGATTCATCTTGCTCTGCTCTGTTCTTT  1225
             |||||||||||||  ||| |||||||||||| |||||||||||||||| || | ||| ||
Sbjct  192   AGGATCTTATGATAACTCCGATATGAAGAGATTGATTCATCTTGCTCTACTTTATTCGTT  251

Query  1226  AAACAATCCAACGCATCGTCCCAACATGAAATG  1258
             |||||| ||||  ||||||||||||||||||||
Sbjct  252   AAACAACCCAATACATCGTCCCAACATGAAATG  284



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 102919841990


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5