BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G32980.1
Length=1191
Score E
Sequences producing significant alignments: (Bits) Value
Ahg497273 jgi|Araly1|497273|fgenesh2_kg.120__2__AT2G32980.1 1666 0.0
Ahg891390 jgi|Araly1|891390|Al_scaffold_0007_3376 1393 0.0
Ahg345055 jgi|Araly1|345055|fgenesh1_pg.C_scaffold_4001397 1371 0.0
Ahg355725 jgi|Araly1|355725|fgenesh1_pg.C_scaffold_7002898 1182 0.0
Ahg355724 jgi|Araly1|355724|fgenesh1_pg.C_scaffold_7002897 1074 0.0
> Ahg497273 jgi|Araly1|497273|fgenesh2_kg.120__2__AT2G32980.1
Length=1100
Score = 1666 bits (902), Expect = 0.0
Identities = 1047/1115 (94%), Gaps = 18/1115 (2%)
Strand=Plus/Plus
Query 61 TAACAATCTGGATCCGCCACCGTCGAATTAATCTCCGGAAAGC-TCGTCGAAAGATGTCG 119
||||| | |||||||||||||||||| ||||||||||| |||| | || |||||||||||
Sbjct 1 TAACATTATGGATCCGCCACCGTCGATTTAATCTCCGGGAAGCTTTGTGGAAAGATGTCG 60
Query 120 ATGGGAGGCGACACGACGTGGGTTGGGAAGAAGCCGATCAGACGCATCGGTGGATTATCT 179
|||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||| |||
Sbjct 61 ATGGGAAGCGACACGACGTGGGTTGGGAAGAAACCGATCAGGCGCATCGGCGGATTGTCT 120
Query 180 GATGCTCTCTCTATCGCCTCCGATCTCGGTTTCGCCGTCGCTCCTCCTCCGTCGCAGGAA 239
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 121 GATGCTCTCTCTATCGCCTCCGATCTTGGTTTCGCCGTCGCTCCTCCTCCGTCGCATGAA 180
Query 240 GAATTACAAAGCTTTGCGTCTTCGAATGGGGAAAGAGGTGATGATTTGATAAGGGTATTG 299
|||||||||||||| ||| |||||||||| |||| |||||| |||||||| ||||| |||
Sbjct 181 GAATTACAAAGCTTGGCGACTTCGAATGGCGAAAAAGGTGACGATTTGATTAGGGTTTTG 240
Query 300 AGAGAGTTATCTGTTGTTCAAAGGAAAATTGCAGACTTGCAGGTCGAGCTTCAAGGGAGG 359
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 AGAGAGTTATCTGCTGTTCAAAGGAAAATTGCAGACTTGCAGGTCGAGCTTCAAGGGAGG 300
Query 360 AAGGATGATAAAAATGTGGCGCATTTGACTCATGTTG-GTGAAATGCAAAAGAAAATCGA 418
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 301 AAGGATGATAAAAATGTGGCGCATTTGACTCAT-TTGAGTGAAATGCAAAAGAAAATCGA 359
Query 419 GACTTTGTCAAGGATTACTCAAATATTGAAAGATGTTATACAAAACAAGGATCGCATCAT 478
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 360 GACTTTGTCAAGGATTACTCAGATATTGAAAGATGTTATACAAAACAAGGATCGCATCAT 419
Query 479 TGCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGAATATCAGAA 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TGCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGAATATCAGAA 479
Query 539 ACAATTCTCAGAGTTGCTAATGAAAGCCGCCAGTGATTATGGCGCCTTAACAGCATCCGT 598
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 480 ACAATTCTCAGAGTTGCTAATGAAAGCCACCAGTGATTATGGTGCCTTAACAGCATCCGT 539
Query 599 GTCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGGGGAAATGCT 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GTCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGGGGAAATGCT 599
Query 659 GCGTCCAATACCTGTGGCACTAGCGTCATGCACGAGATTCTTTGAGGCCATGTCTGCGAT 718
|||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 600 GCGTCCAATACCCGTGGCACTAGCGTCATGCACAAGATTCTTTGAGGCAATGTCTGCGAT 659
Query 719 GAGAGAATCATTCGCGACTCTTCAAGAGCTTCGAGTTGGTAACTCTGCAGTTTCTTTACC 778
|||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||
Sbjct 660 GAGAGAATCATTCGCGACTCTTCAGGACCTTCGAGTTGGCAACTCTGCAGTTTCTTTACC 719
Query 779 AACAACACCAGGAGGTAACGAAATGACACATAGAGACTCAGATTGTGTGACTCCACCTCA 838
||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 720 AACTACACCAGGAGGTAACGAAATGACACATAGGGGCTCAGATTGTGTGACTCCACCTCA 779
Query 839 AGGGAGGATAGAGTCAAGCTTCGACGATTTAGCTGTTCATAAAACAAGGAGACAAAACAA 898
|||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 780 AGGGAGAATAGAGTCAAGCTTCGACGACTTAGCTGTTCATAACACAAGGAGACAAAACAA 839
Query 899 TGATCAAAATgaagaagaagaagaagaagaagaagaagaagaTGGTAATAACAATGGGAA 958
|||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 840 TGATCAAAATGAAGAAGAAGAAGAAGAAGA------------TGGTAATAACAATTCGAA 887
Query 959 CCGGAGACTATCTTGGCCTCCTTCTGTAAAAAAGAGTAGCGTTTAAACAGTTGCTTTTGT 1018
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 888 CAGGAGACTATCTTGGCCTCCTTCTGTAAAAAAGAGTAGCGTTTAAACAATGGCTTTTGT 947
Query 1019 C-TTTGCTTGAGCTTTTTAATATCGATCGTGTTTTGTTTCATCAGCATTAGTGTTCTTTA 1077
||||||||| || |||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 948 TATTTGCTTGATCTGTTTAATATCGATCGTGTTTTGTTTTATCAGCATTAGTGTCCTTTA 1007
Query 1078 TGGATTTACTTATTTCTATTTGATAGTCTTTGAGTGAAACTTAAAACAGTGTATATTTTG 1137
||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||
Sbjct 1008 TGGATTTACTTATTTCTATTTGAAA-TCTTTGAGTGAAACTTAAA-CAGTGTATATTTTG 1065
Query 1138 TTAACACTGGTTTTCATGGTCCATGTGACTATCAT 1172
|||||||||||||| ||||||||| || |||||||
Sbjct 1066 TTAACACTGGTTTTGATGGTCCATATGGCTATCAT 1100
> Ahg891390 jgi|Araly1|891390|Al_scaffold_0007_3376
Length=882
Score = 1393 bits (754), Expect = 0.0
Identities = 849/893 (95%), Gaps = 13/893 (1%)
Strand=Plus/Plus
Query 114 ATGTCGATGGGAGGCGACACGACGTGGGTTGGGAAGAAGCCGATCAGACGCATCGGTGGA 173
|||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 1 ATGTCGATGGGAAGCGACACGACGTGGGTTGGGAAGAAACCGATCAGGCGCATCGGCGGA 60
Query 174 TTATCTGATGCTCTCTCTATCGCCTCCGATCTCGGTTTCGCCGTCGCTCCTCCTCCGTCG 233
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 TTGTCTGATGCTCTCTCTATCGCCTCCGATCTTGGTTTCGCCGTCGCTCCTCCTCCGTCG 120
Query 234 CAGGAAGAATTACAAAGCTTTGCGTCTTCGAATGGGGAAAGAGGTGATGATTTGATAAGG 293
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 121 CAGGAAGAATTACAAAGCTTGGCGTCTTCAAATGGGGAAAGAGGTGACGATTTGATAAGG 180
Query 294 GTATTGAGAGAGTTATCTGTTGTTCAAAGGAAAATTGCAGACTTGCAGGTCGAGCTTCAA 353
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GTATTGAGAGAGTTATCTGCTGTTCAAAGGAAAATTGCAGACTTGCAGGTCGAGCTTCAA 240
Query 354 GGGAGGAAGGATGATAAAAATGTGGCGCATTTGACTCATGTTG-GTGAAATGCAAAAGAA 412
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 241 GGGAGGAAGGATGATAAAAATGTGGCGCATTTGACTCATG-TGAGTGAAATGCAAAAGAA 299
Query 413 AATCGAGACTTTGTCAAGGATTACTCAA-ATATTGAAAGATGTTATACAAAACAAGGATC 471
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 300 AATCGAGACTTTGTCAAGGATTACT-AAGATATTGAAAGATGTTATACAAAACAAGGATC 358
Query 472 GCATCATTGCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGAAT 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 GCATCATTGCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGAAT 418
Query 532 ATCAGAAACAATTCTCAGAGTTGCTAATGAAAGCCGCCAGTGATTATGGCGCCTTAACAG 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 ATCAGAAACAATTCTCAGAGTTGCTAATGAAAGCCGCCAGTGATTATGGCGCCTTAACAG 478
Query 592 CATCCGTGTCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGGGG 651
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 CATCAGTGTCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGGGG 538
Query 652 AAATGCTGCGTCCAATACCTGTGGCACTAGCGTCATGCACGAGATTCTTTGAGGCCATGT 711
|||||||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||
Sbjct 539 AAATGCTGCGCCCAATACCGGTGGCGCTAGCTTCATGTACGAGATTCTTTGAGGCCATGT 598
Query 712 CTGCGATGAGAGAATCATTCGCGACTCTTCAAGAGCTTCGAGTTGGTAACTCTGCAGTTT 771
|||||||||||||||| ||||||||||||||| | ||||||||||||||||||| ||||
Sbjct 599 CTGCGATGAGAGAATCGTTCGCGACTCTTCAAAAACTTCGAGTTGGTAACTCTGTGGTTT 658
Query 772 CTTTACCAACAACACCAGGAGGTAACGAAATGACACATAGAGACTCAGATTGTGTGACTC 831
|| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 659 CTGTACCAACAACACCAGGAGGTAACGAAATGACACATAGAGACTTAGATTGTATGACTC 718
Query 832 CACCTCAAGGGAGGATAGAGTCAAGCTTCGACGATTTAGCTGTTCATAAAACAAGGAGAC 891
||||||||||||| | |||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 719 CACCTCAAGGGAGAACAGAGTCAAGCTTCGACGACTTAGCTGTTCATAACACAAGGAGAC 778
Query 892 AAAACAATGATCAAAATgaagaagaagaagaagaagaagaagaagaagaTGGTAATAACA 951
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 779 AAAACAATGATCAAAATGAAGAAGAAGAAGAAGAAGAAGA---------TGGTAATAACA 829
Query 952 ATGGGAACCGGAGACTATCTTGGCCTCCTTCTGTAAAAAAGAGTAGCGTTTAA 1004
|| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 830 ATTCGAACCGGAGACTATCTTGGCCTCCTCCTGTAAAAAAGAGTAGCGTTTAA 882
> Ahg345055 jgi|Araly1|345055|fgenesh1_pg.C_scaffold_4001397
Length=876
Score = 1371 bits (742), Expect = 0.0
Identities = 846/893 (95%), Gaps = 19/893 (2%)
Strand=Plus/Plus
Query 114 ATGTCGATGGGAGGCGACACGACGTGGGTTGGGAAGAAGCCGATCAGACGCATCGGTGGA 173
|||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 1 ATGTCGATGGGAAGCGACACGACGTGGGTTGGGAAGAAACCGATCAGGCGCATCGGCGGA 60
Query 174 TTATCTGATGCTCTCTCTATCGCCTCCGATCTCGGTTTCGCCGTCGCTCCTCCTCCGTCG 233
|| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 61 TTGTCTGATGCTCTCTCTATCGCCTCCGATCTTGGTTTCGCCGTCGCTCCTCCTCCGTCG 120
Query 234 CAGGAAGAATTACAAAGCTTTGCGTCTTCGAATGGGGAAAGAGGTGATGATTTGATAAGG 293
|| ||||||||||||||||| ||| |||||||||| |||| |||||| |||||||| |||
Sbjct 121 CATGAAGAATTACAAAGCTTGGCGACTTCGAATGGCGAAAAAGGTGACGATTTGATTAGG 180
Query 294 GTATTGAGAGAGTTATCTGTTGTTCAAAGGAAAATTGCAGACTTGCAGGTCGAGCTTCAA 353
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GTTTTGAGAGAGTTATCTGCTGTTCAAAGGAAAATTGCAGACTTGCAGGTCGAGCTTCAA 240
Query 354 GGGAGGAAGGATGATAAAAATGTGGCGCATTTGACTCATGTTG-GTGAAATGCAAAAGAA 412
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 241 GGGAGGAAGGATGATAAAAATGTGGCGCATTTGACTCATG-TGAGTGAAATGCAAAAGAA 299
Query 413 AATCGAGACTTTGTCAAGGATTACTCAAATATTGAAAGATGTTATACAAAACAAGGATCG 472
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 300 AATCGAGACTTTGTCAAGGATTACTCAGATATTGAAAGATGTTATACAAAACAAGGATCG 359
Query 473 CATCATTGCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGAATA 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CATCATTGCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGAATA 419
Query 533 TCAGAAACAATTCTCAGAGTTGCTAATGAAAGCCGCCAGTGATTATGGCGCCTTAACAGC 592
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 420 TCAGAAACAATTCTCAGAGTTGCTAATGAAAGCCGCCAGTGATTATGGTGCCTTAACAGC 479
Query 593 ATCCGTGTCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGGGGA 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 ATCCGTGTCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGGGGA 539
Query 653 AATGCTGCGTCCAATACCTGTGGCACTAGCGTCATGCACGAGATTCTTTGAGGCCATGTC 712
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 540 AATGCTGCGTCCAATACCTGTGGCACTAGCGTCATGCACAAGATTCTTTGAGGCAATGTC 599
Query 713 TGCGATGAGAGAATCATTCGCGACTCTTCAAGAGC-TTCGAGTTGGTAACTCTGCAGTTT 771
||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||
Sbjct 600 TGCGATGAGAGAATCATTCGCGACTCTTCAAGA-CATTCGAGTTGGCAACTCTGCAGTTT 658
Query 772 CTTTACCAACAACACCAGGAGGTAACGAAATGACACATAGAGACTCAGATTGTGTGACTC 831
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 659 CTTTACCAACAACACCAGGAGGTAACGAAATGACACATAGGGACTCAGATTGTGTGACTC 718
Query 832 CACCTCAAGGGAGGATAGAGTCAAGCTTCGACGATTTAGCTGTTCATAAAACAAGGAGAC 891
||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 719 CACCTCAAGGGAGAATAGAGTCAAGCTTCGACGACTTAGCTGTTCATAACACAAGGAGAC 778
Query 892 AAAACAATGATCAAAATgaagaagaagaagaagaagaagaagaagaagaTGGTAATAACA 951
||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct 779 AAAACAATGATAAAAATGAAGAAGAAGAAGAAGA---------------TGGTAATAACA 823
Query 952 ATGGGAACCGGAGACTATCTTGGCCTCCTTCTGTAAAAAAGAGTAGCGTTTAA 1004
|| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 824 ATTCGAACAGGAGACTATCTTGGCCTCCTTCTGTAAAAAAGAGTAGCGTTTAA 876
> Ahg355725 jgi|Araly1|355725|fgenesh1_pg.C_scaffold_7002898
Length=4113
Score = 1182 bits (640), Expect = 0.0
Identities = 718/756 (95%), Gaps = 4/756 (1%)
Strand=Plus/Plus
Query 112 AGATGTCGATGGGAGGCGACACGACGTGGGTTGGGAAGAAGCCGATCAGACGCATCGGTG 171
|||||||||||||| |||| |||||||||||||||||||| |||||||| |||||||| |
Sbjct 3356 AGATGTCGATGGGAAGCGATACGACGTGGGTTGGGAAGAAACCGATCAGGCGCATCGGCG 3415
Query 172 GATTATCTGATGCTCTCTCTATCGCCTCCGATCTCGGTTTCGCCGTCGCTCCTCCTCCGT 231
|||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 3416 GATTGTCTGATGCTCTCTCCATCGCCTCCGATCTCGGTTTCGCCGTTGCTCCTCCTCCGT 3475
Query 232 CGCAGGAAGAATTACAAAGCTTT-GCGTCTTCGAATGGGGAAAGAGGTGATGATTTGATA 290
||||||||||||||||||| ||| |||||||| ||||| |||||||||| ||||||||
Sbjct 3476 CGCAGGAAGAATTACAAAG-TTTGGCGTCTTCTAATGGCCAAAGAGGTGACGATTTGATT 3534
Query 291 AGGGTATTGAGAGAGTTATCTGTTGTTCAAAGGAAAATTGCAGACTTGCAGGTCGAGCTT 350
||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 3535 AGGGTCTTGAGAGAGTTATCTGCTGTTCAAAGGAAAATTGCAGATTTGCAGGTCGAGCTT 3594
Query 351 CAAGGGAGGAAGGATGATAAAAATGTGGCGCATTTGACTCATGTTG-GTGAAATGCAAAA 409
||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||
Sbjct 3595 CAAGGGAGGAAGGATGATAAAAATGTGGCACATTTGACTCATG-TGAGTGAAATGCAAAA 3653
Query 410 GAAAATCGAGACTTTGTCAAGGATTACTCAAATATTGAAAGATGTTATACAAAACAAGGA 469
|||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3654 GAAAATCGAGACCCTGTCAATGATTACTCAAATATTGAAAGATGTTATACAAAACAAGGA 3713
Query 470 TCGCATCATTGCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGA 529
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3714 TCGCATCATTGCTCGTCTCCAACAACCTTATTCCCTAGATTGCATTCCAGTTGAAGCAGA 3773
Query 530 ATATCAGAAACAATTCTCAGAGTTGCTAATGAAAGCCGCCAGTGATTATGGCGCCTTAAC 589
||||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 3774 ATATCAGAAACAATTTTCAGAGTTGCTAATGAAAGCTGCTAGTGACTATGGCGCCTTAAC 3833
Query 590 AGCATCCGTGTCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGG 649
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3834 AGCATCAGTGTCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCGGTCTGGGG 3893
Query 650 GGAAATGCTGCGTCCAATACCTGTGGCACTAGCGTCATGCACGAGATTCTTTGAGGCCAT 709
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3894 GGAAATGCTGCGTCCAATACCCGTGGCACTAGCGTCATGCACGAGATTCTTTGAGGCCAT 3953
Query 710 GTCTGCGATGAGAGAATCATTCGCGACTCTTCAAGAGCTTCGAGTTGGTAACTCTGCAGT 769
||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||
Sbjct 3954 GTCTGCGATGAGAGAATCATTTGCGACTCTTCAAGACCTTCGAGTTGGCAACTCTGCAGT 4013
Query 770 TTCTTTACCAACAACACCAGGAGGTAACGAAATGACACATAGAGACTCAGATTGTGTGAC 829
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 4014 TTCGTTACCAACAACACCAGGAGGTAACGAAATGACACATAGAGACTCTGATTGTGTGAC 4073
Query 830 TCCACCTCAAGGGAGGATAGAGTCAAGCTTCGACGA 865
||||||||||||||| ||||||||||||||||||||
Sbjct 4074 TCCACCTCAAGGGAGAATAGAGTCAAGCTTCGACGA 4109
> Ahg355724 jgi|Araly1|355724|fgenesh1_pg.C_scaffold_7002897
Length=825
Score = 1074 bits (581), Expect = 0.0
Identities = 641/670 (96%), Gaps = 4/670 (1%)
Strand=Plus/Plus
Query 361 AGGATGATAAAAATGTGGCGCATTTGACTCATGTTG-GTGAAATGCAAAAGAAAATCGAG 419
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 158 AGGATGATAAAAATGTGGCGCATTTGACTCATG-TGAGTGAAATGCAAAAGAAAATCGAG 216
Query 420 ACTTTGTCAAGGATTACTCAAATATTGAAAGATGTTATACAAAACAAGGATCGCATCATT 479
|||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 217 ACTTTGTCAATGATAACTCAGATATTGAAAGATGTTATACAAAACAAGGATCGCATCATT 276
Query 480 GCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGAATATCAGAAA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 277 GCTCGTCTCCAACAACCTTATTCGCTAGATTGCATTCCAGTTGAAGCAGAATATCAGAAA 336
Query 540 CAATTCTCAGAGTTGCTAATGAAAGCCGCCAGTGATTATGGCGCCTTAACAGCATCCGTG 599
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 337 CAATTCTCAGAGTTGCTAATGAAAGCCGCCAGTGATTATGGCGCCTTAACAACATTAGTG 396
Query 600 TCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGGGGAAATGCTG 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 397 TCTGATTTTCAGTGGAGCCAAAACTTTAAAGAACCTCCTTCAGTCTGGGGGGAAATGCTG 456
Query 660 CGTCCAATACCTGTGGCACTAGCGTCATGCACGAGATTCTTTGAGGCCATGTCTGCGATG 719
|| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 457 CGCCCAATACCGGTGGCGCTAGCTTCATGTACGAGATTCTTTGAGGCCATGTCTGCGATG 516
Query 720 AGAGAATCATTCGCGACTCTTCAAGAGCTTCGAGTTGGTAACTCTGCAGTTTCTTTACCA 779
|||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||
Sbjct 517 AGAGAATCGTTCGCGACTCTTCAAGAACTTCGAGTTGGTAACTCTGTGGTTTCTGTACCA 576
Query 780 ACAACACCAGGAGGTAACGAAATGACACATAGAGACTCAGATTGTGTGACTCCACCTCAA 839
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 577 ACAACACCAGGAGGTAACGAAATGACACATAGAGACTCAGATTGTGCGACTCCACCTCAA 636
Query 840 GGGAGGATAGAGTCAAGCTTCGACGATTTAGCTGTTCATAAAACAAGGAGACAAAACAAT 899
||||| | |||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 637 GGGAGAACAGAGTCAAGCTTCGACGACTTAGCTGTTCATAACACAAGGAGACAAAACAAT 696
Query 900 GATCAAAATgaagaagaagaagaagaagaagaagaagaagaTGGTAATAACAATGGGAAC 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 697 GATCAAAATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGGTAATAACAATTCGAAC 756
Query 960 CGGAGACTATCTTGGCCTCCTTCTGTAAAAAAGAGTAGCGTTTAAACAGTTGCTTTTGTC 1019
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 757 TGGAGACTATCTTGGCCTCCTTCTGTAAAAA-GAGTAGCGTTTAAACAGTTGCTTTTGTT 815
Query 1020 -TTTGCTTGA 1028
|||||||||
Sbjct 816 ATTTGCTTGA 825
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44451321222
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5