BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G33170.1
Length=4012
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482252 jgi|Araly1|482252|fgenesh2_kg.4__1312__AT2G33170.1 5568 0.0
> Ahg482252 jgi|Araly1|482252|fgenesh2_kg.4__1312__AT2G33170.1
Length=3908
Score = 5568 bits (3015), Expect = 0.0
Identities = 3679/3986 (92%), Gaps = 100/3986 (3%)
Strand=Plus/Plus
Query 16 CACACACAGTAGAGAGAGAAGGCATGCCTTGTCGGCCATTAGAACTT---CAAGCCAAAG 72
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1 CACACACAGTAGAGAGAGAAGGCATGCCTTGTCGGCCATTAGAACTTCAACAAGCCAAAG 60
Query 73 CAAAAACCTTACTTATCCTT-TCT-CCATAAAATCAAAATCCTTATTGGAATATACACTA 130
|||||| ||||||||||||| | | |||| ||||||||||||||||||||||||||||||
Sbjct 61 CAAAAA-CTTACTTATCCTTCTTTCCCAT-AAATCAAAATCCTTATTGGAATATACACTA 118
Query 131 ATTGAttctcctcatcactatctctctctcttcactttttctttccttttctagtttctc 190
||||| | | ||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 119 ATTGA-T-T-CTCATCACTATCTCTCTATCTTCACTTTTTCTTACCTTTTCTAGTTTCTC 175
Query 191 tcttttaattcttGGGATTGTGGAGCTTTAAAGTTCCtttttttGAACCTTTTGAGTTTC 250
|||||||||||||||||||||||||| |||||||||| ||||| | |||||
Sbjct 176 TCTTTTAATTCTTGGGATTGTGGAGC-TTAAAGTTCC---TTTTG--------G-GTTTC 222
Query 251 TGATTCTGCTTGATTCCAGATCATAACCATGATCTTTGTTGATTCC-AGAACTTTAGCTT 309
||||||| ||||||||||||||| |||||||||||||||||||||| | ||| || | |
Sbjct 223 TGATTCTTCTTGATTCCAGATCAAAACCATGATCTTTGTTGATTCCTA-AACAGTATC-T 280
Query 310 TTTGATTTCATTCTATCAAATCACTGAAATTTTCATTTGAGGAATCAGAAGAGTAAGTTT 369
|||| ||||||||||||||||| ||| || | ||| || ||||| ||||||
Sbjct 281 TTTGGTTTCATTCTATCAAATCCCTG-AA---T--TTT------TC--AAGAGAAAGTTT 326
Query 370 TTGCGATACTCTCATTTGTCCTC-AGCTGCACAAACT-ATAACTTCCGATAAG-ATTGAT 426
|||||||| || |||||||| | || |||||||| | | || || | ||| ||||
Sbjct 327 TTGCGATATTCAAATTTGTCCCCAAG-TGCACAAAGTAAGAA-ATCTTA-AAGCTTTGA- 382
Query 427 CA-GTTTTGACCTTTGTGCTTGGTGGTTTCTTCTATGGATTCACATTGGTGTTGAGGGAT 485
|| |||||| | | |||||||||||||| |||||||||||||||| | | | | | |
Sbjct 383 CATTTTTTGAAATCTCTGCTTGGTGGTTTCGTCTATGGATTCACATT-G-G-T-AAGTTT 438
Query 486 T-AT-ATAGT-GTTTCTCT-TTGTTGAGAGGATCAATGGGTTGGTGGATCTTTGAGTTTA 541
| | || | |||| | |||||||||| |||||| ||||||||||| ||||||||
Sbjct 439 TCTTCGTATTCGTTTGAATGAAGTTGAGAGGAACAATGGTTTGGTGGATCTCTGAGTTTA 498
Query 542 AGAAAGAATCAAAATCTATGTTTGTTGGGGTTTTGTTTCTCTTGACTCTTCTGGTTTGGA 601
||| || |||||||||||||||| ||||||||||||||||||||| ||| |||||||||
Sbjct 499 AGAGAGGGTCAAAATCTATGTTTGGTGGGGTTTTGTTTCTCTTGACACTTATGGTTTGGA 558
Query 602 CTTCAGAGAGTTTGAATAGTGATGGTCAGTTTCTCTTGGAGTTGAAGAACAGAGGATTTC 661
||||||||||||| || ||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 559 CTTCAGAGAGTTTAAACAGTGATGGTCAGTTTCTTTTGGAGTTGAAGAACATAGGATTTC 618
Query 662 AAGATTCGTTGAACCGTTTACATAATTGGAACGGCATTGACGAGACGCCGTGTAATTGGA 721
||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||
Sbjct 619 AAGATTCGTTGAACCGTTTGCATAACTGGAACGGCACTGACGAGACGCCGTGTAATTGGA 678
Query 722 TAGGTGTGAATTGCAGCTCACA-AGGCAGTAGTAGTAGTAGTAATAGTCTGGTGGTGACA 780
|||||||||||||||||||| | |||||||||| | |||| ||| |||||||||||||
Sbjct 679 TAGGTGTGAATTGCAGCTCA-ATGGGCAGTAGTA--A-TAGTGATAATCTGGTGGTGACA 734
Query 781 TCTCTTGATTTGAGTTCTATGAATCTCTCTGGGATAGTAAGTCCTAGCATTGGTGGTTTA 840
|||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||
Sbjct 735 TCTCTTGATTTGAGTTCTATGAATCTCTCTGGGATATTAAGCCCGAGCATTGGTGGTTTG 794
Query 841 GTTAACTTGGTCTATCTTAACCTCGCGTACAACGCGTTAACCGGAGATATTCCTCGGGAG 900
|||||||||||| ||||||| ||||| || |||| ||| |||||||||||||||||||||
Sbjct 795 GTTAACTTGGTCCATCTTAATCTCGCATATAACGGGTTTACCGGAGATATTCCTCGGGAG 854
Query 901 ATTGGAAACTGTTCGAAGCTGGAGGTTATGTTTTTGAACAATAACCAGTTTGGTGGTTCC 960
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 855 ATTGGAAACTGTTCTAAGCTGGAGGTTATGTTTTTGAACAATAACCAGTTTGGTGGTTCT 914
Query 961 ATTCCAGTCGAGATCAACAAGTTATCGCAGTTGAGAAGTTTCAACATTTGCAATAACAAG 1020
||||| || ||||| | ||||||||||||||||||||||| |||||||| |||||||||
Sbjct 915 ATTCCGGTTGAGATTAGGAAGTTATCGCAGTTGAGAAGTTTTAACATTTGTAATAACAAG 974
Query 1021 CTTTCAGGTCCTTTGCCAGAAGAGATTGGTGATTTATACAATC-TAGAAGAGCTTGTGGC 1079
||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct 975 CTTTCGGGTCCTTTGCCAGAAGAGATTGGTGATTTATACAA-CTTGGAAGAGCTTGTGGC 1033
Query 1080 TTATACTAATAACTTGACCGGTCCATTGCCTCGTTCTTTAGGAAATCTCAACAAGTTGAC 1139
||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1034 TTATACTAACAACTTGACCGGTCCATTGCCTCGTTCTATAGGAAATCTCAACAAGTTGAT 1093
Query 1140 GACATTTCGAGCAGGGCAGAACGATTTCTCGGGGAATATACCTACTGAAATTGGTAAATG 1199
|||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||
Sbjct 1094 GACATTTCGAGCAGGGCAGAACGATTTCTCTGGGAATATACCTGCTGAAATCGGTAAATG 1153
Query 1200 TCTTAACTTGAAGTTGCTCGGTCTTGCTCAGAATTTCATTTCTGGAGAGCTTCCCAAGGA 1259
|||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1154 CCTTAACTTGACGTTGCTCGGTCTTGCGCAGAATTTCATTTCTGGAGAGCTTCCTAAGGA 1213
Query 1260 AATTGGGATGCTTGTTAAACTTCAGGAGGTGATTCTGTGGCAGAACAAGTTTTCAGGGTT 1319
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1214 AATTGGGATGCTTGTTAAACTTCAGGAGGTGATTCTGTGGCAGAACAAGTTTTCCGGGTC 1273
Query 1320 TATTCCGAAAGATATTGGGAATTTAACAAGTCTTGAGACTCTT-GCTTTGTACGGTAACT 1378
||||||||||| |||||||||||| || |||| |||||| || ||||| ||||||||||
Sbjct 1274 AATTCCGAAAGAGATTGGGAATTTAGCACGTCTCGAGACT-TTGGCTTTATACGGTAACT 1332
Query 1379 CATTGGTTGGACCTATACCATCAGAGATTGGTAACATGAAGTCCTTGAAGAAGCTCTATC 1438
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CATTGGTTGGACCGATACCATCAGAGATTGGTAACATGAAGTCCTTGAAGAAGCTCTATC 1392
Query 1439 TTTACCAAAACCAGTTGAATGGGACTATCCCAAAGGAGCTTGGAAAGCTTTCCAAAGTAA 1498
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1393 TTTACCAAAACCAGTTGAATGGGACAATCCCAAAGGAGCTTGGAAAGCTTTCCAAAGTAA 1452
Query 1499 TGGAAATCGATTTCTCGGAGAATTTGTTGAGTGGGGAGATTCCAGTTGAGCTGAGCAAGA 1558
|||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||
Sbjct 1453 TGGAAATCGATTTCTCGGAGAATTTGTTGAGTGGTGAGATTCCGGTTGAGCTAAGCAAGA 1512
Query 1559 TCAGTGAGTTGAGGCTGCTCTATTTGTTTCAGAACAAGTTAACTGGAATCATACCAAATG 1618
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1513 TCAGTGAGTTGAGGCTATTGTATTTGTTTCAGAACAAGTTAACTGGAATCATACCAAATG 1572
Query 1619 AGCTCAGTAAGTTGAGGAATTTGGCGAAACTCGATCTCTCCATCAACTCCTTAACCGGTC 1678
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1573 AGCTCAGTAGGTTGAGGAATTTGGCGAAACTCGATCTCTCCATCAATTCCTTAACCGGTC 1632
Query 1679 CTATTCCACCGGGTTTCCAGAATCTTACGTCTATGCGCCAACTTCAGCTTTTCCACAATT 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1633 CTATTCCACCGGGTTTCCAGAATCTTACGTCTATGCGCCAACTTCAGCTTTTCCACAATT 1692
Query 1739 CCCTCAGTGGTGTAATCCCTCAAGGTCTTGGTTTGTACAGTCCTCTATGGGTTGTTGACT 1798
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1693 CCCTCAGCGGTGTAATCCCTCAAGGTCTTGGTTTGTACAGTCCTCTATGGGTTGTTGATT 1752
Query 1799 TCTCAGAAAACCAACTTTCAGGAAAAATACCGCCTTTTATCTGTCAAC-AGTCTAATCTC 1857
| ||||| ||||||||||| |||||||||||||||||||||||||||| || ||||||||
Sbjct 1753 TTTCAGAGAACCAACTTTCCGGAAAAATACCGCCTTTTATCTGTCAACAAG-CTAATCTC 1811
Query 1858 ATTCTGTTGAATCTCGGGTCTAACAGGATATTTGGAAATATTCCACCAGGTGTATTGCGC 1917
|||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| |
Sbjct 1812 ATTCTGTTGAATCTCGGGTCTAACCGGATATTTGGAAACATTCCACCAGGTATATTGAGA 1871
Query 1918 TGCAAATCTCTGCTGCAGCTTCGTGTTGTTGGAAACCGACTCACTGGTCAGTTTCCGACT 1977
|||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1872 TGCAAATCGCTGCTGCAGCTACGTGTTGTTGGAAACCGACTCACTGGTCAGTTCCCGACC 1931
Query 1978 GAGTTATGCAAGCTTGTCAACCTTTCTGCTATTGAGTTGGATCAAAACCGGTTTAGCGGA 2037
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1932 GAGTTATGCAAGCTTGTCAACCTTTCTGCTATAGAGTTGGATCAAAACCGGTTTAGCGGA 1991
Query 2038 CCACTACCTCCTGAGATAGGCACGTGTCAGAAGCTGCAAAGACTTCATCTTGCAGCTAAC 2097
|| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1992 CCGCTACCTCCTGAGATAGGCACTTGCCAGAAGCTGCAAAGACTTCATCTTGCAGCTAAC 2051
Query 2098 CAATTTTCCTCTAATCTACCC-AACGAAATCAGTAAACTCTCCAACCTGGTAACATTTAA 2156
||||||||||| ||| ||||| || || ||| ||||||||||||||||||||||||||||
Sbjct 2052 CAATTTTCCTCAAATATACCCGAA-GAGATCGGTAAACTCTCCAACCTGGTAACATTTAA 2110
Query 2157 CGTTTCCTCAAACTCTCTCACTGGACCAATCCCCTCTGAAATAGCCAACTGTAAAATGCT 2216
||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct 2111 CGTTTCCTCAAACTCTCTCACCGGACCAATCCCCTCTGAAATAGCTAACTGTAAGATGCT 2170
Query 2217 TCAACGACTTGACTTGAGCCGGAACAGTTTCATCGGTTCTTTACCTCCCGAGCTTGGAAG 2276
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 2171 TCAACGACTTGACTTGAGCCGGAACAGTTTCATTGGTTCTTTACCTTGCGAGCTTGGAAG 2230
Query 2277 CCTTCATCAGCTCGAGATACTCAGACTCTCAGAAAATAGATTCTCTGGCAACATACCGTT 2336
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2231 TCTTCATCAGCTCGAGATCCTCAGACTCTCAGAAAATAGATTCTCTGGCAACATACCGTT 2290
Query 2337 TACCATTGGAAACCTTACCCATCTAACTGAGCTGCAGATGGGAGGAAACTTGTTTTCAGG 2396
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 2291 TACCATTGGAAACCTTACGCATCTAACTGAGCTGCAGATGGGAGGAAACTTGCTTTCAGG 2350
Query 2397 AAGTATACCGCCTCAACTCGGTTTACTCTCGAGTCTGCAGATTGCAATGAACCTGAGCTA 2456
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2351 AAGTATACCGCCTCAACTCGGTTTACTCTCGAGTCTGCAAATTGCAATGAACCTGAGCTA 2410
Query 2457 CAATGATTTCAGTGGTGAAATACCTCCCGAGATCGGGAATCTTCATCTGCTAATGTACCT 2516
|||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||
Sbjct 2411 CAATAATTTCAGTGGTGAAATACCTCCCGAGCTTGGGAATCTTTATCTGCTAATGTACCT 2470
Query 2517 ATCTCTGAACAACAACCATCTCAGCGGCGAAATCCCGACCACATTCGAGAACTTATCCAG 2576
||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct 2471 ATCTCTGAACAACAACCATCTGAGTGGCGAAATCCCAACCACATTCGAGAACTTATCCAG 2530
Query 2577 TTTACTCGGGTGCAACTTTTCCTACAACAACCTCACCGGACAGCTTCCACATACGCAGAT 2636
||||||||| ||||||||||| |||||||||||||| |||| |||||| ||||||||| |
Sbjct 2531 TTTACTCGGCTGCAACTTTTCATACAACAACCTCACTGGACGGCTTCCGCATACGCAGCT 2590
Query 2637 CTTTCAAAACATGACTCTAACCAGTTTTCTCGGAAACAAAGGACTCTGTGGCGGCCATTT 2696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CTTTCAAAACATGACTCTAACCAGTTTTCTCGGAAACAAAGGACTCTGTGGCGGCCATTT 2650
Query 2697 GAGAAGCTGTGACCCTAGCCACTCCTCTTGGCCTC-ACATTTCATCTCTAAAAGCGGGTT 2755
||||||||||||||||| ||| ||||||||||| | || |||||||||||||||||||||
Sbjct 2651 GAGAAGCTGTGACCCTAACCAGTCCTCTTGGCC-CAACCTTTCATCTCTAAAAGCGGGTT 2709
Query 2756 CTGCTCGGAGGGGGAGAATCATCATCATCGTGTCTTCAGTCATTGGCGGTATCTCTCTTT 2815
||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2710 CTGCTCGTCGCGGGAGAATCATCATCATTGTGTCTTCAGTCATTGGCGGTATCTCTCTTT 2769
Query 2816 TACTAATCGCGATTGTCGTTCATTTCCTAAGAAATCCCGTGGAACCAACGGCTCCTTATG 2875
|||| || || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2770 TACTCATAGCTATTGTCGTTCATTTCCTAAGAAATCCCGTGGAACCAACGGCTCCTTATG 2829
Query 2876 TGCACGACAAGGAACCCTTTTTTCAAGAATCCGACATTTACTTTGTCCCGAAAGAACGAT 2935
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2830 TGCACGACAAGGAACCCTTTTTTCAAGAATCCGACATTTACTTTGTCCCTAAAGAACGAT 2889
Query 2936 TCACAGTCAAAGACATTTTGGAAGCAACAAAAGGCTTCCACGATAGCTACATTGTCGGTA 2995
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2890 TCACAGTCAAAGATATTTTGGAAGCAACAAAAGGCTTCCACGATAGCTACATTGTCGGTA 2949
Query 2996 GAGGCGCTTGCGGGACCGTTTACAAAGCAGTTATGCCTTCAGGTAAAACAATAGCAGTTA 3055
|||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||
Sbjct 2950 AAGGCGCTTGCGGAACCGTTTACAAAGCGGTTATGCCTTCGGGTAAAACCATAGCAGTTA 3009
Query 3056 AAAAACTCGAATCCAACAGAGAAGGcaacaacaacaacagcaacaacaCTGATAACAGTT 3115
||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 3010 AAAAACTCGAATCCAACAGAGAAGGCAACAACAACAACA-CG--------GATAACAGTT 3060
Query 3116 TCCGCGCCGAGATTCTAACACTAGGCAAAATCCGTCACAGGAACATTGTCAGGCTATACA 3175
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3061 TCCGCGCCGAGATTCTAACACTAGGCAAAATCCGTCACAGGAACATTGTCAGGCTCTACA 3120
Query 3176 GTTTCTGTTACCACCAAGGATCAAACTCGAACCTCTTGCTCTACGAATACATGTCTCGGG 3235
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 3121 GTTTCTGTTACCACCAAGGATCAAACTCAAACCTCTTGCTCTACGAGTACATGTCTCGGG 3180
Query 3236 GAAGCCTTGGCGAGTTACTTCACGGCGGGAAATCACATAGCATGGATTGGCCAACTCGGT 3295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3181 GAAGCCTTGGCGAGTTACTTCACGGCGGGAAATCACATAGCATGGATTGGCCAACTCGGT 3240
Query 3296 TTGCTATCGCACTCGGTGCAGCGGAAGGTCTCGCTTACTTACATCATGATTGTAAACCAA 3355
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 3241 TTGCTATCGCACTCGGTGCAGCGGAAGGTCTTGCTTACTTGCATCATGATTGTAAACCAA 3300
Query 3356 GAATCATTCACCGTGACATCAAATCGAATAACATTCTCATCGATGAGAATTTCGAAGCCC 3415
| ||||||||||| ||||||||||| |||||||||||| | ||||||||||||||||| |
Sbjct 3301 GGATCATTCACCGCGACATCAAATCTAATAACATTCTCCTTGATGAGAATTTCGAAGCTC 3360
Query 3416 ATGTTGGAGATTTCGGGTTAGCAAAAGTCATCGACATGCCACTA-TCAAAATCCGTCTCA 3474
|||||||||||||||||||||| ||||||||||||||||| | | || ||||||||||||
Sbjct 3361 ATGTTGGAGATTTCGGGTTAGCTAAAGTCATCGACATGCCTC-AGTCGAAATCCGTCTCA 3419
Query 3475 GCCGTTGCTGGATCCTACGGTTACATCGCTCCCGAGTATGCATACACAATGAAAGTAACA 3534
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3420 GCCGTCGCTGGATCCTACGGTTACATCGCTCCTGAGTATGCATACACAATGAAAGTAACA 3479
Query 3535 GAGAAATGCGATATCTACAGCTTTGGAGTTGTTCTTCTTGAATTGTTAACCGGGAAAGCT 3594
||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||| ||
Sbjct 3480 GAGAAATGCGATATCTACAGCTTCGGAGTTGTTCTACTCGAATTGTTAACCGGAAAACCT 3539
Query 3595 CCGGTTCAGCCGCTAGAGCAAGGCGGAGATCTTGCCACGTGGACAAGAAACCATATCAGA 3654
|||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 3540 CCGGTTCAGCCGCTGGAGCAAGGCGGCGATCTTGCCACATGGACAAGAAACCATATCAGA 3599
Query 3655 GATCATTCGTTAACATCTGAAATCCTTGATCCTTATCTAACAAAGGTAGAGGACGATGTG 3714
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 3600 GATCATTCGTTAACATCTGAAATCCTCGATCCTTATTTAACAAAGGTAGAGGACGATGTG 3659
Query 3715 ATTCTCAATCATATGATCACAGTGACGAAAATTGCCGTGCTCTGTACGAAATCTTCGCCG 3774
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3660 ATTCTCAATCATATGATCACAGTGACGAAAATTGCAGTGCTCTGTACGAAATCTTCGCCG 3719
Query 3775 TCTGATCGACCGACGATGAGAGAAGTAGTGTTGATGCTTATAGAGTCCGGTGAACGTGCC 3834
|| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3720 TCGGATCGACCGACAATGAGAGAAGTAGTGTTGATGCTTATAGAGTCCGGAGAACGTGCC 3779
Query 3835 GGAAAAGTAATTGTGTCTACAACGTGCAGTGATTTACCTCCACCGGCGCCGCCGTGAAAA 3894
||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||
Sbjct 3780 GGAAAAGTAATTGTGTCCACCACGTGCGGTGATTTACCTCCACCGGCGCCGCCGTGAAAA 3839
Query 3895 AAGTTCTTTTTATAACTTACTTTTTCTTTCTCCGAAATTGATTA-TGTATAGATTAATAT 3953
| | |||||||| || | | ||||||||||| || ||||||||||||
Sbjct 3840 AGGGTCTTTTTA---CT--C-----C-------GAAATTGATTAATGAATAGATTAATAT 3882
Query 3954 GATTTGTATAGTCATTATAGAAGAAA 3979
|||||||||||||||||||||| |||
Sbjct 3883 GATTTGTATAGTCATTATAGAAAAAA 3908
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 151659428405
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5