BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G33420.1
Length=3420
Score E
Sequences producing significant alignments: (Bits) Value
Ahg345092 jgi|Araly1|345092|fgenesh1_pg.C_scaffold_4001434 5049 0.0
Ahg470425 jgi|Araly1|470425|fgenesh2_kg.1__379__AT1G04470.1 2148 0.0
> Ahg345092 jgi|Araly1|345092|fgenesh1_pg.C_scaffold_4001434
Length=3123
Score = 5049 bits (2734), Expect = 0.0
Identities = 2998/3127 (96%), Gaps = 11/3127 (0%)
Strand=Plus/Plus
Query 78 ATGACCCATCATCACCGGAGAGAGTCCTTCTCGGTTACTCCCTCTACCATGGGAGGTTCC 137
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 1 ATGACCCATCATCACCGGAGAGAGTCCTTCTCGGTAACTCCCTCTAACATGGGAGGTTCC 60
Query 138 GTCGTGCTTTGTCCTAATACCGACCTTCTTTGGCCATTTGGGAAGCTTGAAGGGCTTGAT 197
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTGGTGCTTTGTCCTAATACCGACCTTCTTTGGCCATTTGGGAAGCTTGAAGGGCTTGAT 120
Query 198 CGAGATGATATTCGTGAGACGGCTTATGAAATCTTCTTCACGGCTTGCCGGTCTTCACCG 257
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 121 CGAGATGATATTCGTGAGACGGCTTATGAGATCTTCTTCACGGCTTGCCGGTCATCACCG 180
Query 258 GGTTTTGGTGGTAGGACTGCTCTCACGTTTTACTCTAACCACAATAGCAATGACCATCAT 317
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 181 GGTTTTGGAGGTAGGACTGCTCTCACGTTTTACTCTAACCATAATAGCAATGACCATCAT 240
Query 318 GGAGACGGAGGAGGAGGAATAGGATCTGGTGGCTCAACTGGTGTTGGGTCTGGGTTTGGC 377
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 241 GGAGACGGAGGAGGAGGAATAGGTTCTGGTGGCTCAACTGGTGTTGGGTCTGGGTTTGGG 300
Query 378 TCTTCTGGGAGGAAAGAGGTGGTGACGACCCCTACAAGCCGGGTGAAACGGGCTTTAGGT 437
||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 301 TCTTCAGGGAGGAAAGAGGTGGTCACGACCCCTACAAGCCGGGTTAAACGGGCTTTAGGT 360
Query 438 TTGAAGATGCTTAAACGGTCTCCGTCTAGGCGAATGTCCACGATAGGAGCGGCTGGAGGA 497
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 361 TTGAAGATGCTTAAACGGTCTCCGTCTAGGCGAATGTCGACCATAGGAGCGGCTGGAGGA 420
Query 498 GCCGCAACTTCACTATC-CC--CTGGCGGAATGAATAGTAG-TGCGGGACATATTAGTCC 553
|| | |||||||||||| || |||||||||||||| ||| | ||||||||||||||||
Sbjct 421 GCGGGAACTTCACTATCACCTGGTGGCGGAATGAATACTAGCT-CGGGACATATTAGTCC 479
Query 554 TGGAGCCGGATTCTTGACGGTCCAACCTTCTCGTCCTAGAAGACCGTTGACATCGGCAGA 613
||||||||| ||||||||||||| |||||||| ||||| ||||||||||| ||||| ||
Sbjct 480 TGGAGCCGGGTTCTTGACGGTCCCTCCTTCTCGGCCTAGGAGACCGTTGACCTCGGCGGA 539
Query 614 GATCATGAGGCAACAAATGAAGGTGACAGAACAGAGTGACAGTCGGCTTCGGAAAACCCT 673
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 GATCATGAGGCAGCAAATGAAGGTGACAGAACAGAGTGACAGTCGGCTTCGGAAAACCCT 599
Query 674 TTTGAGAACGCTTGTTGGTCAAACGGGTAGACGAGCGGAGACGATAATCTTACCGTTAGA 733
|| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 600 ATTAAGAACGCTTGTTGGTCAAACGGGTAGACGAGCAGAGACGATAATCTTACCATTAGA 659
Query 734 GCTCCTTCGACACTTAAAAACATCGGAGTTTGGTGACATACACGAGTACCAGCTTTGGCA 793
|||||||||||||| |||||||||||||||||||| |||| ||||||||| |||||||
Sbjct 660 ACTCCTTCGACACTTGAAAACATCGGAGTTTGGTGATGTACATGAGTACCAGGTTTGGCA 719
Query 794 AAGAAGGCAACTCAAAGTTCTTGAAGCTGGTCTTCTTCTTCATCCATCGATTCCTCTAGA 853
|||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 720 AAGAAGACAACTAAAAGTTCTTGAAGCTGGCCTTCTTCTTCATCCATCGATTCCTCTAGA 779
Query 854 CAAAACCAACAACTTTGCAATGCGTCTAAGAGAAGTTGTCAGACAAAGCGAGACAAAACC 913
|||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 780 CAAAACTAACAACTTTGCAATGCGTCTAAGAGAAATTGTTAGACAAAGCGAGACAAAACC 839
Query 914 CATTGACACAAGCAAAACCTCAGACACGATGAGAACACTCACCAACGTGGTCGTGTCTTT 973
||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||
Sbjct 840 CATTGACACAAGCAAAAACTCAGACACGATGAGAACACTCACCAACGTTGTTGTGTCTTT 899
Query 974 ATCTTGGCGTGGCACTAATGGAAACCCAACTGATGTTTGTCACTGGGCTGACGGTTACCC 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 ATCTTGGCGTGGCACTAATGGAAACCCAACTGATGTTTGTCACTGGGCTGACGGTTACCC 959
Query 1034 GCTCAACATTCATCTTTATGTTGCTTTGTTGCAGTCGATATTCGATGTGAGAGACGAGAC 1093
||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct 960 CCTCAACATTCATCTTTATGTTGCTTTGTTGCAGTCCATTTTCGATGTCAGAGACGAGAC 1019
Query 1094 ATTGGTGCTCGATGAGATCGATGAGCTTCTAGAGCTAATGAAGAAGACTTGGTCAACACT 1153
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 ATTGGTGCTGGATGAGATCGATGAGCTTCTAGAGCTAATGAAGAAGACTTGGTCAACACT 1079
Query 1154 AGGGATCACACGACCGATACATAATCTGTGTTTCACTTGGGTTTTGTTTCATCAGTACGT 1213
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1080 AGGGATCACACGACCAATACATAATCTGTGTTTCACTTGGGTTTTATTTCATCAGTACGT 1139
Query 1214 CGTGACATCACAAATGGAACCGGACTTGCTCGGCGCTTCTCATGCTATGTTAGCTGAAGT 1273
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 CGTGACGTCACAAATGGAACCGGACTTGCTCGGCGCTTCTCATGCTATGTTAGCTGAAGT 1199
Query 1274 TGCTAATGACGCTAAGAAGCTTGACCGCGAAGCTCTTTATGTGAAACTATTAAACTCAAC 1333
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1200 TGCTAATGACGCTAAGAAGCTTGACCGCGAAGCTCTCTATGTGAAACTATTAAACTCAAC 1259
Query 1334 ATTGGCCTCTATGCAAGGATGGACAGAGAAAAGGTTATTGAGCTACCATGATTATTTCCA 1393
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1260 ATTGGCCTCTATGCAAGGATGGACCGAGAAAAGGTTATTGAGCTACCATGATTATTTCCA 1319
Query 1394 AAGAGGGAATGTGGGATTGATAGAAAATCTTCTGCCATTGGCATTATCATCGTCAAGAAT 1453
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1320 AAGAGGGAATGTGGGATTGATAGAAAATCTTCTGCCATTGGCGTTATCATCGTCAAGAAT 1379
Query 1454 TTTGGGAGAAGATGTGACAATTTCTCAAGGGAAAGGACAAGAGAAAGGTGATGTGAAATT 1513
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 ATTGGGAGAAGATGTGACAATTTCTCAAGGGAAAGGACAAGAGAAAGGTGATGTGAAATT 1439
Query 1514 AGTGGATCATTCAGGAGATCGCGTCGATTATTACATAAGATCTTCCATTAAAAACGCATT 1573
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1440 AGTGGATTATTCAGGAGATCGCGTCGATTATTACATAAGATCGTCCATTAAAAACGCATT 1499
Query 1574 TTCTAAGGTGATAGAAAATACAAAAGCTAAGATCGCAGCTACAGATGAAGGAGAAGAAGC 1633
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1500 TTCTAAGGTGATAGAAAACACGAAAGCTAAGATCGCAGCTACAGATGAAGGAGAAGAAGC 1559
Query 1634 TGCTGGAACGTTGTTACAGCTAGCTAAAGAAACAGAGGAGCTAGCATTAAGGGAACGCGA 1693
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 1560 GGCTGGAACGTTGTTACAGCTAGCTAAGGAAACAGAGGAGTTAGCATTAAGGGAACGCGA 1619
Query 1694 ATGTTTCAGTCCGATACTCAAGAGATGGCACTCAGTTGCTGCTGGTGTTGCCTCGGTGTC 1753
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1620 ATGTTTCAGCCCGATACTCAAGAGATGGCACTCGGTTGCTGCTGGTGTTGCCTCGGTGTC 1679
Query 1754 ACTTCACCAATGTTATGGCTCGATCTTGATGCAATATTTAGCTGGAAGATCGTTTATCTC 1813
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1680 ACTTCACCAATGTTATGGCTCGATCTTGATGCAATATTTGGCTGGAAGATCGTTTATCTC 1739
Query 1814 GAGAGATACTGTTGAGGTTTTGCAAACGGCAGGGAAGCTTGAGAAGGTCTTGGTGCAGAT 1873
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1740 GAGAGATACTGTTGAGGTTTTGCAAACGGCAGGGAAGCTCGAAAAGGTCTTGGTGCAGAT 1799
Query 1874 GGTAGCTGAAGATTCAGAGGAATGCGAGGACGGTGGAAAGGGGCTTGTACGAGAGATGGT 1933
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1800 GGTGGCTGAAGATTCAGAGGAATGCGATGACGGTGGAAAGGGGCTTGTACGAGAGATGGT 1859
Query 1934 TCCTTATGAAGTCGATTCTATTATATTGCGTCTTCTAAGACAATGGGTCGAAGAAAAGCT 1993
||| ||||||||||||||||||||| |||||||| | ||||| |||||||||||||||||
Sbjct 1860 TCCATATGAAGTCGATTCTATTATACTGCGTCTTTTGAGACAGTGGGTCGAAGAAAAGCT 1919
Query 1994 CAAGGCAGTTCAAGAGTGTTTATTTAGAGCAAAGGAAACTGAAACGTGGAACCCGAAATC 2053
||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1920 CAAAAAAGTTCAAGAGTGCTTATTTAGAGCAAAGGAAACTGAAACATGGAACCCGAAATC 1979
Query 2054 CAAATCAGAACCTTATGCACAATCCGCAGGAGAGTTGATGAAGCTAGCGAAGGACACAAT 2113
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1980 CAAATCAGAACCTTACGCACAATCCGCAGGAGAGTTGATGAAGCTAGCTAAGGACACGAT 2039
Query 2114 CGATGAGTTCTTCGAAATCCCCATCGGGATTACTGAAGATCTTGTTCATGATATCGCTGA 2173
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct 2040 CGATGAGTTCTTCGAAATCCCTATCGGGATTACAGAAGATCTTGTTCATGATATCGCAGA 2099
Query 2174 AGGATTGGAACAACTTTTTCAAGAATACACCACATTTGTTGCATCTTGCGGAGCAAGACA 2233
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2100 AGGATTGGAACAACTCTTTCAAGAATACACCACATTTGTTGCATCTTGCGGATCAAGACA 2159
Query 2234 AAGTTACATCCCTACATTACCTCCTCTTACAAGATGCAACAGAGATTCCAGATTCGTTAA 2293
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2160 AAGTTACATCCCTACATTACCTCCTCTTACGAGATGCAACAGAGATTCCAGATTCGTTAA 2219
Query 2294 GCTATGGAAGAGAGCTACACCGTGTACTACTTCCAACGAAGACCTT-AAATACACCACAT 2352
| |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||
Sbjct 2220 GTTATGGAAGAGAGCTGCACCGTGTACTACTTCCAACGAAGAT-TTCAAATACACCACAT 2278
Query 2353 CTGTCATATCCGACGGCCACCATCCACGGCCATCCACAAGCCGCGGGACACAACGTCTAT 2412
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2279 CTGTCATTTCCGACGGCCACCATCCACGGCCATCCACAAGCCGCGGGACACAACGTCTAT 2338
Query 2413 ACATTCGTCTCAACACATTACATTTCCTAAGCTCACATATCCACTCCTTAAACAAAACAC 2472
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2339 ACATTCGTCTCAACACATTACATTTCTTAAGCTCACATATCCACTCCTTAAACAAAACAC 2398
Query 2473 TCTCTTTAAACCCGAGGATACTTCCGGCAACTCGAAAACGTTACCGCCATAGAAACAACA 2532
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 2399 TCTCTTTAAACCCGAGGATTCTTCCCGCAACTCGAAAACGTTACCGCCATAGAAACAACA 2458
Query 2533 ATTCATCTTCTTATTTCGATTTCACATACGCTGGAATCGAATCCGCTTGCCAACACGTTT 2592
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2459 ACTCATCTTCTTATTTCGATTTCACATACGCTGGAATCGAATCCGCTTGCCAACACGTTT 2518
Query 2593 CAGAGGTCGCGGCTTACCGTTTGATTTTCCTCGATTCAAACTCTGTTTTGTACGAGAGCC 2652
||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2519 CAGAGGTTGCAGCTTACCGTTTGATTTTCCTCGATTCCAACTCTGTTTTCTACGAGAGCC 2578
Query 2653 TCTACGTAGGAGAAGTTGCGAACGCGAGGATCAGACCAGCGTTACGAATCATGAAACAGA 2712
||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct 2579 TCTACGTAGGAGAAGTTGCAAACGCGAGGATCAGACCAGCTTTACGCATCATGAAACAGA 2638
Query 2713 ACTTAACATTGATGTCAGCGATTCTTGCGGATAGAGCTCAATCATTAGCAATGAGGGAGG 2772
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2639 ACTTAACATTGATGTCAGCGATTCTTGCGGATAGAGCTCAATCATTAGCGATGAGGGAAG 2698
Query 2773 TTATGAAATCATCATTCGAAGCGTTCTTGATGGTCCTTCTCGCCGGTGGATACTCCCGAG 2832
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2699 TTATGAAATCATCATTCGAAGCGTTCTTGATGGTCCTCCTCGCCGGTGGATACTCCCGAG 2758
Query 2833 TGTTCTATAGATCGGATCACAGTATTATCGAAGAAGATTTCGAGAACTTGAAAAGGGTCT 2892
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 2759 TGTTCTATAGATCGGATCACAGTCTTATCGAAGAAGATTTCGAGAACTTGAAAAGGGT-T 2817
Query 2893 TT-TGTACTTGTGGTGAAGGGTTGATACCTGAAGAAGTGGTGGACAGAGAGGCAGAGACA 2951
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2818 TTCTGTACTTGTGGTGAAGGGTTGATACCTGAAGAAGTGGTGGACAGAGAGGCAGAGACA 2877
Query 2952 GTGGAAGGAGTGATTCAGCTTATGAGTCAACCAACAGAACAACTTATGGAAGATTTTAGT 3011
||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2878 GTGGAGGGAGTGATACAGCTTATGAGTCAACCAACAGAACAACTAATGGAAGATTTTAGC 2937
Query 3012 ATTGTAACGTGTGAGACAAGTGGAATGGGGATGGTTGGTTCTGGACAGAAGCTACCTATG 3071
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2938 ATTGTAACGTGTGAGACAAGTGGAATGGGGATGGTTGGTTCTGGACAGAAGCTACCGATG 2997
Query 3072 CCTCCAACTACAGGACGGTGGAACCGGTCTGATCCAAACACGATCTTGAGGGT-ACTTTG 3130
||||||||||||||||| ||||||||||||||||| ||||| ||||||||||| | ||||
Sbjct 2998 CCTCCAACTACAGGACGATGGAACCGGTCTGATCCGAACACAATCTTGAGGGTTA-TTTG 3056
Query 3131 TCATAGAAACGACCGTGTTGCTAATCAGTTTTTAAAGAAATCGTTTCAATTGCCTAAACG 3190
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3057 TCATAGAAACGACCGTGTTGCTAATCAGTTCTTAAAGAAATCGTTTCAATTGCCTAAACG 3116
Query 3191 AAGGTGA 3197
|||||||
Sbjct 3117 AAGGTGA 3123
> Ahg470425 jgi|Araly1|470425|fgenesh2_kg.1__379__AT1G04470.1
Length=3275
Score = 2148 bits (1163), Expect = 0.0
Identities = 2480/3109 (80%), Gaps = 118/3109 (4%)
Strand=Plus/Plus
Query 145 TTTGTCCTAATACCGACCTTCTTTGGCCATTTGGGAAGCTTGAAGGGCTTGATCGAGATG 204
|||||||| |||| || ||||| |||||||| ||||||||||| || |||||||| ||||
Sbjct 121 TTTGTCCTGATACTGATCTTCTCTGGCCATTCGGGAAGCTTGATGGTCTTGATCGGGATG 180
Query 205 ATATTCGTGAGACGGCTTATGAAATCTTCTTCACGGCTTGCCGGTCTTCACCGGGTTTTG 264
| || ||||| || || ||||| ||||| || | || || || || ||||| || ||||
Sbjct 181 AAATCCGTGAAACCGCGTATGAGATCTTTTTTGCCGCATGTCGATCATCACCTGGATTTG 240
Query 265 GTGGTAGGACTGCTCTCACGTTTTACTCTAACCACAATAGCAATGACCATCATGGAGACG 324
| || || ||||||||||| || ||||| || |||||| | ||||||||| || || |
Sbjct 241 GAGGCAGAACTGCTCTCACATTCTACTCCAAGCACAATGGTGGTGACCATCAAGGGGATG 300
Query 325 GAGGAGGAGGAATAGGATCTGGTGGCTCAACTGGTGTTGGGTCTGGGTTTGGCTCTTCT- 383
|| |||||| |||| ||||| || || | ||||||||| || || |||| |
Sbjct 301 GAATAGGAGG---AGGA---GGTGGGTC-AC--CTAATGGGTCTGGATTCGGGTCTT-TA 350
Query 384 GGGAGGAAAGAGGTGGTGACGACCCCTACAAGCCGGGTGAAACGGGCTTTAGGTTTGAAG 443
|| || ||||| |||||||| || || |||||||| || |||||||| ||||| || |||
Sbjct 351 GGAAGAAAAGAAGTGGTGACAACACCAACAAGCCGAGTAAAACGGGCGTTAGGGTTAAAG 410
Query 444 ATGCTTAAACGGTCTCCGTCTAGGCGAATGTCCACGA-TA-GGAGCGGCTGGAGGAGCC- 500
||||||||||| ||||| |||||||||||||| || | || ||| | | || |||||||
Sbjct 411 ATGCTTAAACGATCTCCATCTAGGCGAATGTCGAC-AGTAGGGA-CCGTTGTAGGAGCCG 468
Query 501 -G-CAACTTCAC-T-ATCCCCTGG-CGGAAT-G-A--ATA-GTAGT-G--CGGGACATAT 547
| || | || | | ||||||||| ||| | | ||| | ||| | | ||||| |
Sbjct 469 TGTCAGC-TC-CTTCATCCCCTGGTAATAATGGAAGCATAGGAAGTGGTTCAGGACA-CT 525
Query 548 T-AGTCCTGGAGCCGGATTCTTGACGGTCCAACCTTCTCGTCCTAGAAGACCGTTGACAT 606
| || ||||| || || || || ||||||| ||||||||| ||| || ||||||| || |
Sbjct 526 TCAGCCCTGGGGCTGGGTTTTTTACGGTCCCACCTTCTCGGCCTCGACGACCGTTAACCT 585
Query 607 CGGCAGAGATCATGAGGCAACAAATGAAGGTGACAGAACAGAGTGACAGTCGGCTTCGGA 666
| ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 586 CTGCAGAAATCATGAGGCAACAAATGAAGGTGACAGAGCAGAGTGACACTCGGCTTCGGA 645
Query 667 AAACCCTTTTGAGAACGCTTGTTGGTCAAACGGGTAGACGAGCGGAGACGATAAT-CTTA 725
||||||| |||| ||||||||||| ||||| || || ||||| ||||| ||||| |||
Sbjct 646 AAACCCTAATGAGGACGCTTGTTGGCCAAACTGGAAGGCGAGCAGAGACAATAATCCTT- 704
Query 726 CCGTTAGAGCTCCTTCGACACTTAAAAACATCGGAGTTTGGTGACATACACGAGTACCAG 785
||||||||||| || || ||| | ||| |||||||||||||||| |||| ||||| ||
Sbjct 705 CCGTTAGAGCTTCTCCGTCACGTGAAATCATCGGAGTTTGGTGATGTACATGAGTATCAA 764
Query 786 CTTTGGCAAAGAAGGCAACTCAAAGTTCTTGAAGCTGGTCTTCTTCTTCATCCATCGATT 845
||||||||||| ||||||||||||| ||||||||||||||||| | || ||||| ||
Sbjct 765 ATTTGGCAAAGACGGCAACTCAAAGTCCTTGAAGCTGGTCTTCTAATCCACCCATCAATC 824
Query 846 CCTCTAGACAAAACCAACAACTTTGCAATGCGTCTAAGAGAAGTTGTCAGACAAAGCGAG 905
||||| || || |||||||||| |||||||||||| ||||| | || | || || |||
Sbjct 825 CCTCTTGAGAAGACCAACAACTCTGCAATGCGTCTCCGAGAAATCATCCGCCAGAGTGAG 884
Query 906 ACAAAACCCATTGACACAAGCAAAACCTCAGACACGATG-AGAACACTCA-CCAACGTGG 963
|||||| |||| ||||| ||||||| |||||||| ||| | ||| | | ||| | |
Sbjct 885 ACAAAAGCCATCGACACCAGCAAAAACTCAGACATAATGCCG-ACA-TTATGTAACATTG 942
Query 964 TCGT-GTCTTTATCTTGGCGTGGCA-CTAATGGAAACCCAACTGATGTTTGTCACTGGGC 1021
|| | || ||||| ||||| || | ||| || |||| ||||| || || |||||
Sbjct 943 TC-TCCTCCTTATCATGGCGCAACAGC-AAT-CCAA--CAACCGATGTATGCCATTGGGC 997
Query 1022 TGACGGTTACCCGCTCAACATTCATCTTTATGTTGC-TTTGTTGCAGTCGATATTCGATG 1080
||| || |||||||| || |||||||| ||||| || || |||||||||||||| || |
Sbjct 998 TGATGGATACCCGCTTAATATTCATCTCTATGTGGCGCTT-TTGCAGTCGATATTTGACG 1056
Query 1081 TGA-GAGACGAGACATTGGTGCTCGATGAGATCGATGAGCTTCTAGAGCTAATGAAGAAG 1139
| | | || ||||||||||| || |||||||||||||||||| | || || ||||| |||
Sbjct 1057 T-ACGTGATGAGACATTGGTTCTTGATGAGATCGATGAGCTTTTGGAACTGATGAAAAAG 1115
Query 1140 ACTTGGTCAACACTAGGGATCACACGACCGATACATAATCTGTGTTTCACTTGGGTTTTG 1199
|| |||| || | ||||| |||||||| || ||||| |||||||||||||||||| ||
Sbjct 1116 ACATGGTTAATGTTGGGGATTACACGACCTATGCATAACCTGTGTTTCACTTGGGTTCTG 1175
Query 1200 TTTCATCAGTACGTCGTGACATCACAAATGGAACCGGACTTGCTCGGCGCTTCTCATGCT 1259
|||||||| ||| | ||||| ||||| ||||| || |||||||| || || || || ||
Sbjct 1176 TTTCATCAATACATTGTGACCTCACAGATGGAGCCAGACTTGCTTGGTGCCTCCCACGCC 1235
Query 1260 ATGTTAGCTGAAGTTGCTAATGACGCTAAGAAGCT-TGACCGCGAAGCTCTTTATGTGAA 1318
||||| ||||||||||| |||||||| |||||| | ||| ||||| |||||||| |||||
Sbjct 1236 ATGTTGGCTGAAGTTGCGAATGACGCCAAGAAG-TCTGATCGCGAGGCTCTTTACGTGAA 1294
Query 1319 ACTATTAAACTCAACATTGGCCTCTATGCAAGGATGGACAGAGAAAAGGTTATTGAGCTA 1378
|| || | ||| |||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct 1295 GCTCTTGACCTCGACATTGGCCTCTATGCAAGGATGGACTGAAAAAAGGTTGTTGAGCTA 1354
Query 1379 CCATGATTATTTCCAAAGAGGGAATGTGGGATTGATAGAAAATCTTCTGCCATTGGCATT 1438
||||||||||| ||| |||| || |||||||||||||| ||||||||||||||||| ||
Sbjct 1355 TCATGATTATTTTCAACGAGGAAACGTGGGATTGATAGAGAATCTTCTGCCATTGGCGTT 1414
Query 1439 ATCATCGTC-AAGAATTTTGGGAGAAGATGTGACAATTTCTCAAGGGAAAGGACAAGAGA 1497
|| ||||| ||| |||||||| || || |||||||| ||||||||||| || | |||||
Sbjct 1415 GTCTTCGTCTAAG-ATTTTGGGGGAGGACGTGACAATCTCTCAAGGGAATGGTCTAGAGA 1473
Query 1498 AAGGTGATGTGAAATTAGTGGA-TCATTCAGGAGATCGCGTCGATTATTACATAAGATCT 1556
||||||||||||||||||| || || |||||| ||||| || ||||| || |||||| |
Sbjct 1474 AAGGTGATGTGAAATTAGTAGATTC-TTCAGGGGATCGTGTTGATTACTATATAAGAGCA 1532
Query 1557 TC-CATTAAAAACGCATTTTCTAAGGTGATAGAAAATACAAAAG-CTAAGATCGCAGCTA 1614
|| | |||||||||| || || ||||| |||||||| | || | | || ||||||| |
Sbjct 1533 TCTC-TTAAAAACGCCTTCTCAAAGGTTATAGAAAACATGAAGGCCGAA-ATCGCAGAAA 1590
Query 1615 CAGATGAAGGAGAAGAAGCTGCTGGAACGTTG-TTACAGCTAGCTAAAGAAACAGAGGAG 1673
|||| |||||||||||||| || | |||| || | ||||||||| || |||||||||
Sbjct 1591 CAGAGGAAGGAGAAGAAGCGGCAACTATGTTGCTT-CGGCTAGCTAAGGAGACAGAGGAG 1649
Query 1674 CTAGCATTAAGGGA-ACGCGAATGTTTCAGTCCGATACTCAAGAGATGGCACTCAGTTGC 1732
|| || || | || | |||| ||||| || || ||||| ||||||||| ||| |||||
Sbjct 1650 CTTGCTTTGCGCGAGA-GCGAGTGTTTTAGCCCTATACTTAAGAGATGGTACTTGGTTGC 1708
Query 1733 TGCTGGTGTTGCCTCGGTGTCACTTCACCAATGTTATGGCTCGATCTTGATGCAATATTT 1792
||||| ||||||||||| || ||||||||||||||||| || |||||||||||||| ||
Sbjct 1709 AGCTGGAGTTGCCTCGGTTTCGCTTCACCAATGTTATGGTTCCATCTTGATGCAATACTT 1768
Query 1793 AGCTGGAAGATCGTTTATCTCGAGAGATACTGTTGAGGTTTTGCAAACGGCAGGGAAGCT 1852
|||||| ||||| ||| | | ||| |||||||| ||| |||||||||| ||||||||
Sbjct 1769 AGCTGGTCGATCGACAATCACTAAAGAGACTGTTGAAGTTCTGCAAACGGCGGGGAAGCT 1828
Query 1853 TGAGAAGG-TCTTGGTGCAGATGGTAGCTGAAGATTCAGAGGAATGCGAGGACGGTGG-A 1910
||||||| |||| ||||||||||| || ||||||||||||||||| || || || || |
Sbjct 1829 CGAGAAGGTTCTT-GTGCAGATGGTGGCAGAAGATTCAGAGGAATGTGAAGATGGAGGCA 1887
Query 1911 AAGGGGCTTG-TACGAGAGATGGTTCCTTATGAAGTCGATTCTATTATATTGCGTCTTCT 1969
|| ||||||| || ||||||||||||| |||||| ||||||| ||||| || || || ||
Sbjct 1888 AA-GGGCTTGTTA-GAGAGATGGTTCCGTATGAAATCGATTCGATTATCTTACGACTACT 1945
Query 1970 AAGACAATGGGTCGAAGAAAAGCT-CAAGGCAGTTCAAGAGTGTTT-ATTTAGAGCAAAG 2027
||| |||||| | || || ||| | ||| |||||||||| ||||| | ||||||||
Sbjct 1946 AAGGCAATGGATTGACGAGAAGTTACAA-ACAGTTCAAGAATGTTTGA-GCAGAGCAAAA 2003
Query 2028 GAAACTGAAACGTGGAACCCGAAATCCAAATCAGAACCTTATGCACAATCCGCAGGAGAG 2087
||| ||||||| ||||||||||| || ||||||||||||||||||||||| || ||||||
Sbjct 2004 GAAGCTGAAACATGGAACCCGAAGTCAAAATCAGAACCTTATGCACAATCTGCTGGAGAG 2063
Query 2088 TTGATGAAGCTAGCGAAGGACACAATCGATGAGTTCTTCGAAATCCCCATCGGGATTACT 2147
||||||||||||||||| || | ||| | || ||||| || ||||| || ||||||||
Sbjct 2064 TTGATGAAGCTAGCGAATGATGCGATCCAGGAATTCTTTGAGATCCCTATTGGGATTACA 2123
Query 2148 GAAGATCTTGTTCATGATATCGCTGAAGGATTGGAACAACTTTTTCAAGAATACACCACA 2207
|| ||||| ||||||||| | ||||| ||||| ||| |||| || |||||||||||||||
Sbjct 2124 GAGGATCTGGTTCATGATCTTGCTGATGGATTAGAAAAACTCTTCCAAGAATACACCACA 2183
Query 2208 TTTGTTGCATCTTGCGGAGCAAGACAAAGTTACATCCCTAC-ATTACCTCCTCTTACAAG 2266
|| || |||||||| || ||| ||| |||||||| ||||| || ||||| ||||||||
Sbjct 2184 TTCGTAGCATCTTGTGGTTCAAAACAGAGTTACATTCCTACGCTT-CCTCCACTTACAAG 2242
Query 2267 ATGCAACAGAGATTCCAGA-TTCGTTAAGCTATGGAAGAGAGCTACACCGTGTACTACTT 2325
||| ||| |||| | || | ||||| ||||| ||||||| ||| || || |||||| | |
Sbjct 2243 ATGTAACCGAGACT-CAAAGTTCGTGAAGCTGTGGAAGAAAGCCACGCCTTGTACTGCCT 2301
Query 2326 C-CAACGAAGACCTTAAATACACCACATCT-GTCATA-TC-C-GACGGCCACCATCCACG 2380
| | ||||| | | || |||| || | || | | | | | ||| |||| || ||
Sbjct 2302 CGGGA-GAAGAAC-T---TA-ACCAAAT-TGGTGA-AGCCACAGGTGGCAACCACCCGCG 2353
Query 2381 GCCATCCACAAGCCGCGGGACACAACGTCTATACATTCGTCTCAACACATTACATTTCCT 2440
|| ||||| |||||||| || ||||| || ||| ||||||||||||| |||||||||||
Sbjct 2354 TCCTTCCACCAGCCGCGGAACCCAACGCCTCTACGTTCGTCTCAACACTTTACATTTCCT 2413
Query 2441 AAGCTCACATA-TCCACTC-CTTAAACAAAACACTCTCTTTAAACCCGAGGATACTTCCG 2498
|||||| || | | ||||| | | |||||| | || ||| | ||||||||| | || ||
Sbjct 2414 AAGCTCTCA-ACTTCACTCAC-TCAACAAATCCCTTTCTCTCAACCCGAGGGTCCTCCCC 2471
Query 2499 GCAACTCGAAAACGTTACCGCCATA-GAAACAACAATTCATCTTCTTATTTCGATTTCAC 2557
|| || || ||||| | |||| | | | || ||| ||||| || |||||||| |||||
Sbjct 2472 GCGACACGTAAACGCTGCCGCGA-ACG-GAC--CAAATCATCATCGTATTTCGAATTCAC 2527
Query 2558 AT-ACGCTGGAATCGAATCCGCTTGCCAACACGTTTCAGAGGTCGCGGCTTACCGTTTGA 2616
| | || |||||||||||||| |||||||| || || ||||| || |||||||| || |
Sbjct 2528 -TCAAGCGGGAATCGAATCCGCGTGCCAACATGTCTCTGAGGTTGCAGCTTACCGGTTAA 2586
Query 2617 TTTTCCTCGATTCAAACTCTGTTTTGTACGAGAGCCTCTACGTAGGAGAAGTTGCGAACG 2676
| ||||| || ||| |||| || || ||||| ||||| ||| ||||| || || || |
Sbjct 2587 TCTTCCTGGACTCATACTCAGTATTCTACGAAAGCCTATACACCGGAGATGTCGCTAATG 2646
Query 2677 CGAGGATCAGACCAGCGTTACGAATCATGAAACAGAACTTAACATTGATGTCAGCGATTC 2736
||||||||| ||||| ||| |||||| ||||||| |||||||| || ||| | |||||||
Sbjct 2647 CGAGGATCAAACCAGGGTTGCGAATCTTGAAACATAACTTAACGTTAATGACCGCGATTC 2706
Query 2737 TTGCGGATAGAGCTCAATCATTAGCAATGAGGGAGGTTATGAAATCATCATTCGAAG-CG 2795
||||||| |||| ||| | || || |||| || || ||||| | |||||||||| ||
Sbjct 2707 TTGCGGACCGAGCGCAAGCGTTGGCGATGAAAGAAGTCATGAAGGCTTCATTCGAAGTCG 2766
Query 2796 TTCTTGATGGTCCTTCTCGCCGGTGGATACTCCCGAGTGTTCTATAGATCGGATCACAG- 2854
|| |||| ||| || ||||| || ||| | |||||||| |||||| || | |||||| |
Sbjct 2767 TT-TTGACGGTTCTACTCGCGGGAGGAAATTCCCGAGTTTTCTATCGAACAGATCAC-GA 2824
Query 2855 TATTATCGAAGAAGATTTCGAGAACTTGAAA-AGGGTCTT-TTGTACTTGTGGTGAAGGG 2912
| ||||||| |||||||||||| | || ||| | ||| || ||| ||||| || |||||
Sbjct 2825 TTTTATCGAGGAAGATTTCGAG-AGTTTAAAGAAGGT-TTATTGCACTTGCGGCGAAGGA 2882
Query 2913 TTGATACCTGAAGAAGTGGTGGA-CAGAGAGGCAGAGACAGTGGAAGGAGTGATTCAGCT 2971
| || || || ||||||||||| | |||||||||||||||| || ||||||||||||||
Sbjct 2883 CTAATCCCAGAGGAAGTGGTGGATC-GAGAGGCAGAGACAGTTGAGGGAGTGATTCAGCT 2941
Query 2972 TATGAGTCAACCAACAGAACAACTTATGGAAGATTTTAGTATTGTAACGTGTGAGACAAG 3031
|||| | |||||||||||||||||||||||||||||||| || || || || ||| ||||
Sbjct 2942 TATGGGCCAACCAACAGAACAACTTATGGAAGATTTTAGCATCGTGACATGCGAGTCAAG 3001
Query 3032 TGGAATGGGGAT-GGTTGGTTCTGGACAGAAGCTACCTATGCCTCCAACTACAGGACGGT 3090
|||||||| || ||| || | ||||| || || || ||||||||||| || ||||| |
Sbjct 3002 CGGAATGGG-ATTGGTCGGGACAGGACAAAAACTTCCAATGCCTCCAACGACTGGACGAT 3060
Query 3091 GGAACCGGTCTGATCCAAACACGATCTTGAGGGTACTTTG-TCATAGAAACGACCGTGTT 3149
||||| |||| |||||||||||||| ||| | || ||||| | ||||| |||| |||||
Sbjct 3061 GGAACAGGTCGGATCCAAACACGATTTTGCGAGTTCTTTGCT-ATAGAGACGATCGTGTC 3119
Query 3150 GCTAATCAGTTTTT-AAAGAAATCGTTTCAATTGCCTAAACGAAGGTGA 3197
|||||||||||||| ||| ||||||||||||||| ||||||||| |||
Sbjct 3120 GCTAATCAGTTTTTGAAA-AAATCGTTTCAATTGGGTAAACGAAGATGA 3167
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 129129345189
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5