BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G34210.1
Length=2970
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482364 jgi|Araly1|482364|fgenesh2_kg.4__1424__AT2G34210.1 4104 0.0
Ahg327088 jgi|Araly1|327088|fgenesh1_pm.C_scaffold_6002308 1062 0.0
> Ahg482364 jgi|Araly1|482364|fgenesh2_kg.4__1424__AT2G34210.1
Length=2937
Score = 4104 bits (2222), Expect = 0.0
Identities = 2549/2704 (94%), Gaps = 34/2704 (1%)
Strand=Plus/Plus
Query 290 GTTTCATTGTAAGTGGTGAAGCTGACCTTCCTAATGAGGATTCTGATCATCGTAGGCAAT 349
|||||||||||||||||||| |||||||||||| ||||||| || |||||| ||||||||
Sbjct 245 GTTTCATTGTAAGTGGTGAAACTGACCTTCCTAGTGAGGATACTAATCATCATAGGCAAT 304
Query 350 ATTACCAACGGGGGTTTCATCCTCATGAAGAAGATGTCGACGAGTTGGAAAAGAGAACTT 409
|||||||||||||||| |||||||||||||||||||||||||||| || ||||||||||
Sbjct 305 TTTACCAACGGGGGTTTAATCCTCATGAAGAAGATGTCGACGAGTTTGAGAAGAGAACTT 364
Query 410 TGGAAAGATTGTCTACGA-AAT--ATGCAAAGGATGATTATGAGCTTGATGATGTTAACG 466
||||||| |||||| | | || ||||| |||||||| ||||||||||||| |||||||
Sbjct 365 TGGAAAGGTTGTCTTCTAGGATGCATGCAGAGGATGATGATGAGCTTGATGAGGTTAACG 424
Query 467 ACGTTGATCAACAAGCGCTTTTGCCATCAGTCCGTGACCCTAAACTGTGGCTGGTGAAAT 526
|| |||| |||||||||||||||||||||||||| ||||| ||| ||||| |||| ||||
Sbjct 425 ACATTGAGCAACAAGCGCTTTTGCCATCAGTCCGCGACCCGAAATTGTGGTTGGTCAAAT 484
Query 527 GTGCGATTGGACGTGAAAGAGAAGTTGCTGTTTGTCTTATGCAAAAAATCGTAGATAGAG 586
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 485 GTGCGATTGGCCGTGAAAGAGAAGTTGCTGTTTGTCTTATGCAAAAAATCATAGATAGAG 544
Query 587 GATCAGAGTTCAAGATTAGATCTGCTATTGCTCTTGATCATCTTCAAAACTATGTATATA 646
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 545 GATCAGAGTTCAAGATTAGATCTGCTATTGCCCTTGATCATCTTCAAAACTATGTATACA 604
Query 647 TTGAAGCGGATATGGAAGCTCATGTGAAAGAGGCTATCAAGGGCATGCGGAATATTTATG 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 605 TTGAAGCGGATATGGAAGCTCATGTGAAAGAGGCTATCAAGGGCATGCGGAATATTTATG 664
Query 707 CTAATCAGAAGATTTTGCTTGTCCCCATAAAAGAAATGACTGCTGTTCTTTCTGTCGAGA 766
|||||||||||||||| ||||||||||||||||||||||| | |||||||||||| || |
Sbjct 665 CTAATCAGAAGATTTTACTTGTCCCCATAAAAGAAATGACAGATGTTCTTTCTGTTGAAA 724
Query 767 GTAAAGCAATCGATTTATCCCGTGACT-CGTGGGTTAGAATGAAACTTGGGATATATAAG 825
|||||||||||||| |||||||||| | | ||||||||||||||||||||||||||||||
Sbjct 725 GTAAAGCAATCGATCTATCCCGTGA-TACATGGGTTAGAATGAAACTTGGGATATATAAG 783
Query 826 GGTGATCTAGCTCAGGTGGTTGATGTTGATAATGTACGTAAGAGGGTCACAGTCAAGTTG 885
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 784 GGTGATCTAGCTCAGGTGGTTGATGTTGATAATGTGCGTAAGAGGGTCACAGTCAAGTTG 843
Query 886 ATCCCAAGAATTGATCTGCAGGCTCTAGCCAATAAGCTGGAAGGAACAGAGAATGTCAAG 945
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 844 ATCCCAAGAATTGATCTGCAGGCTCTAGCCAATAAGCTGGAAGGAAGAGAGAATGTCAAG 903
Query 946 AAGAAAGCTTTTGCTCCACCTCCACGTTTCATGAACATTGATGAGGCAAGGGAACTTCAC 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 AAGAAAGCTTTTGCTCCACCTCCACGTTTCATGAACATTGATGAGGCAAGGGAACTTCAC 963
Query 1006 ATACGTGTTGAGCACCGGCGTGATCCAATGACGGGTGACTACTTTGAGAATATCGGTGGA 1065
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 964 ATACGTGTTGAGCACCGGCGTGATCCAATGACGGGTGACCCCTTTGAGAATATCGATGGT 1023
Query 1066 ATGCTTTTCAAAGATGGTTTTCTTTACAAGAAAGTATCGACGAAGTCCATTGCTGCTCAG 1125
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1024 ATGCTTTTCAAAGATGGTTTTCTTTACAAGAAAGTATCGACGAAGTCAATTGCTGCTCAG 1083
Query 1126 AATGTAACACCAACCTTCGATGAACTTGAAAGATTCAAGAGACCAAATGAAAATGGGGAG 1185
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 AATATTACACCAACCTTCGATGAACTTGAAAGATTCAAGAGACCAAATGAAAATGGGGAG 1143
Query 1186 ATCGACTTCGTTGATGAGTCGACTTTATTTGCAAATAGAAAGAAGGGTCATTTCATGAAA 1245
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 1144 ATCGACTTCGTTGATCCCTCCACTTTATTTGCAAATAGAAAGAAGGGTCATTTCATGAAA 1203
Query 1246 GGTGATGCGGTTATTGTGATCAAGGGGGATCTTAAAAACTTGAAGGGCTGGATTGAGAAA 1305
||||||||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||
Sbjct 1204 GGTGATGCGGTTATTGTTATCAAGGGGGATCTTATAAACTTAAAGGGTTGGATTGAGAAA 1263
Query 1306 GTAGATGAAGAGAATGTCCTTATCAGATCAG-AGATGAAAGATCTTCCTAATCCTATTGC 1364
||||||||||||||||| ||||||||||| | | ||||||| ||||||||||||||||||
Sbjct 1264 GTAGATGAAGAGAATGTTCTTATCAGATC-GAATATGAAAGGTCTTCCTAATCCTATTGC 1322
Query 1365 GGTTAATGGGAGAGAGCTTTGTAAATACTTTGAACCTGGAAATTTTGTGAAGGTTGTGTC 1424
||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1323 GGTAAATGAGAGAGAGCTTTGCAAATACTTTGAACCTGGAAATTTTGTGAAGGTTGTGTC 1382
Query 1425 TGGCATCCATGAAGGAGGAACTGGCATGATTGTCAAAGTTGATCAGCATATGCTTATCAT 1484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1383 TGGCATCCATGAAGGAGGAACTGGCATGATTGTCAAAGTTGATCAGCATATGCTTATCAT 1442
Query 1485 TCTGTCTGATACAACCAAAGAACATATTTGCGTCTTCGCTGATCATGTTGCCAAGAGTGC 1544
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 1443 TCTGTCTGATACAACCAAAGAACATATTCGCGTCTTCGCTGATCATGTCGCCAAGAGTGC 1502
Query 1545 AGAAGTGACTAAAGGTGTCACAAAAATTGGGGACTATGAACTTCATGATCTTGTGATTCT 1604
|||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1503 AGAAGTGACTAATGCTGTCACAAAAATTGGAGACTATGAACTTCATGATCTTGTGATTCT 1562
Query 1605 AAGTGACTTTAGCTTTGGAGTAATCCTAAAACTTGATAGTGAAGCTATCCAGATTCTTAA 1664
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1563 AAGTGACTTGAGCTTTGGAGTAATCATAAAACTTGATAGTGAAGCTATCCAGATTCTTAA 1622
Query 1665 AGGGGTTCCTGACAGCTCAGAGGTCTCTATTGTCAAAGCCAGCGAAATAAAATACAAAAT 1724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 AGGGGTTCCTGACAGCTCAGAGGTCTCTATTGTCAAAGCCAGCGAAATAAAATACAAAAT 1682
Query 1725 TTGGAAGAAAATCAATGTGCAAGACCGTTACAAAAATGTCGTCGCGGTGAAAGATGTTGT 1784
||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1683 TTGGAAGAAAAGCAATGTTCAAGACCGTTACAAAAATGTCATCGCGGTGAAAGATGTTGT 1742
Query 1785 CAGGGTCATTGAGGGTCCTAGCAAAGGTAAACAAGGTCCAGTGGTGCAAATCTACAAAGG 1844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1743 CAGGGTCATTGAGGGTCCTAGCAAAGGTAAACAAGGTCCAGTGGTGCAAATCTACAAAGG 1802
Query 1845 AGTGTTGTTTATACATGACCGGCATAACCTTGAACACACTGGATTTATCTGCACTAGATG 1904
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1803 AGTGTTGTTTATACATGACCGGCATAACTTTGAACACACTGGATTTATCTGCACTAGATG 1862
Query 1905 CTCATCTTGTGTTCTTGCTGGTGGCAATTTCAAGACACCAGCCCTGGTTCCTCCATCTCC 1964
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 1863 CTCATCTTGTGTTCTTGTTGGTGGCAATTTCAAGACACCAGCCCTGATTCCTCCATCTCC 1922
Query 1965 AAGGAGATTCCAACGGGCAGACATGGGATATAACCCTGGAGCTGGAGGGAGACATCAG-G 2023
||| ||||| ||||||||||||||||||||||||| | |||||||||||||||| | |
Sbjct 1923 AAGAAGATTTCAACGGGCAGACATGGGATATAACC--G-AGCTGGAGGGAGACATT-GTG 1978
Query 2024 GTGGACGAGGGAGAAGGGGTGACGATCATTTGGTAGGTACTTATGTCAAAATTCGTCTGG 2083
||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||
Sbjct 1979 GTGGACGAGGGAGAAGGGGTGACGATCTTTTGGTAGGTACTTATGTGAAAATTCGTATGG 2038
Query 2084 GGCCTTTCAAGGGATATAGTGGGCGTTTAGTTGAAGTCAAAGATAAGCTAGTGCGTGTGG 2143
|| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 2039 GGGCTTTCAAGGGATATAGCGGGCGTTTAGTTGAAGTCAAAGATAAGTTAGTGCGTGTGG 2098
Query 2144 AACTTGAGGCCAAGATTGTGACAG------T----T--GAGCGGAAGGCGATATCAGATA 2191
|||| ||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct 2099 AACTCGAGGCCAAGATTGTGACAGGCAAGCTCCACTTTGAGCGGAAGGCGATATCAGATA 2158
Query 2192 TGACTGATAATGTAGTCGCAACCC-CGCAGTATAATATGGGAAGCCAAACTCCTATGCAT 2250
||||||||||||||| | || || | || ||||||||||||||||||||||||||||||
Sbjct 2159 TGACTGATAATGTAGCCACA-CCTTCTCATTATAATATGGGAAGCCAAACTCCTATGCAT 2217
Query 2251 CCTTCCCGGACTCCACTTCATCCCTGTATGACTCCAATGCGGCATTCTGGAGCTACACCT 2310
||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||
Sbjct 2218 CCTTCCCGGACTCCACTTCATCCTTGTATGACTCCGATGCGGGATTCTGGAGCTACACCT 2277
Query 2311 ATCCATGATGGAATGAGGACACCTATGCGTGGTAGAGCTTGGAATCCTTACATGCCTATG 2370
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2278 ATCCATGATGGAATGAGGACACCTATGCGTGGTAGAGCTTGGAATCCTTACATGCCGATG 2337
Query 2371 AGTCCTCCTAGGGATAACTGGGAAGATGGGAACCCGGGATCATGGGGAACAAGTCCATAT 2430
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 2338 AGTCCTCCTAGGGATAACTGGGAAGATGGAAACCCGGGATCATGGGGAACAGGTCCATAT 2397
Query 2431 GAAGCAGCTACGCCTGGATCAG-ATTGGGGTAGTAGTACTCCTGGTCGTAGTAGTTACAG 2489
|||||| ||||||||||||||| || ||||||||||||||||| || |||||||||||||
Sbjct 2398 GAAGCATCTACGCCTGGATCAGGAT-GGGGTAGTAGTACTCCTAGTTGTAGTAGTTACAG 2456
Query 2490 AGATGCCGGAACACCAATAAACAATGCTAATGCCCCAAGTCCTATGACACCAAGCTCAAC 2549
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2457 TGATGCTGGAACACCAATAAACAATGCTAATGCCCCAAGTCCTATGACACCAAGCTCAGC 2516
Query 2550 TTCCTACTTACCTACCACACCCGGAGGACAAGCAATGACTCCTGGAACCGATCTCGATGT 2609
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2517 TTCCTACCTACCTACCACACCCGGAGGACAACCAATGACTCCTGGAACCGATCTCGATGT 2576
Query 2610 CATGTCTCTTGATATAGGTGGAGATGCAGAAACCAGGTTCATACCCGGTATATTGGTCAA 2669
|||||||| |||| ||||||||||||||||||| ||||| | || ||||| ||||||||
Sbjct 2577 CATGTCTCATGATTTAGGTGGAGATGCAGAAACAAGGTTTGTGCCTGGTATTTTGGTCAA 2636
Query 2670 TGTACACAAAGCTGGAGAGGATAG-AAATCCCGGTGTTATTCGAGATGTTCTTCCGGATG 2728
||||||||||||||||||||||| ||| |||||||| || |||||||||||||||||||
Sbjct 2637 CGTACACAAAGCTGGAGAGGATAGTAAA-CCCGGTGTCATCCGAGATGTTCTTCCGGATG 2695
Query 2729 GCTCCTGTGTAGTCGCACTTGGACACAGAGGTGAAGGCGAGACGATAA-GAGCGACACAG 2787
|||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||||
Sbjct 2696 GCTCATGTGTAGTCGCACTTGGACACAGAGGTGAAGGCGGGACGATAATG-GCGACACAG 2754
Query 2788 AACAAAGTGAGCCTAGTTTGTCCGAAGAAGAACGAACGTGTGAAGATTCTTGGAGGCAAG 2847
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2755 AACAAAGTGAGCCTAGTTTGTCCAAAGAAGAACGAACGTGTGAAGATTCTTGGAGGCAAG 2814
Query 2848 TATTGTGGTTCAACAGCTAAGGTCATTGGTGAGGACGG-TCAGGACGGTATAGTTAAGCT 2906
||| |||||||||||| ||||||||||||||| ||||| | |||| |||||||||||||
Sbjct 2815 TATGGTGGTTCAACAGGTAAGGTCATTGGTGAAGACGGATG-GGACAGTATAGTTAAGCT 2873
Query 2907 AGATGAAAGTCTCGATATCAAGATATTGAAGCTGACTATATTAGCCAAGTTAGTTCATGA 2966
|||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||
Sbjct 2874 AGATGAAAGTCTCGATGTCAAGATAATGAAGCTGGCTATATTAGCCAAGTTAGTTCATGA 2933
Query 2967 GTGA 2970
||||
Sbjct 2934 GTGA 2937
Score = 315 bits (170), Expect = 2e-84
Identities = 207/225 (92%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 32 ATGAAGATGACTCGGAGATGGAGGATGAGGACGAAGAAGACGAATATGAACCCAGAAGTA 91
|||| ||||| |||||||||||||| ||||| || |||||||||||||| || |||||||
Sbjct 23 ATGAGGATGATTCGGAGATGGAGGAGGAGGAGGACGAAGACGAATATGAGCCGAGAAGTA 82
Query 92 GCCGCAAAGGAAGATCAGGGAAGAAAAGGGGAAGATCAAATTCAGATTCCGATGGTCGGC 151
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 83 GCCGCAAAGGTAGCTCAGGGAAGAAAAGGGGAAGATCAAATTCAGATTCCGATGGTCGGC 142
Query 152 GAGGGAGTAAAAAGAAGTCTTCGGGCTCCGCCTTCATTGACTGGGAGGTTGAGGTAGATG 211
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 143 GAGGGAGTAAAAAGAAGTCTTCGGGTTCCGCCTTCATTGACTGGGAGGTTGAGGTGGATG 202
Query 212 ACGACGTCGAAGACGACGATGATGATGTGGACGTTGA-AGACGGT 255
||||||| ||||||||||| |||||||| || | ||| | |||||
Sbjct 203 ACGACGTAGAAGACGACGACGATGATGTTGAAGATGATA-ACGGT 246
> Ahg327088 jgi|Araly1|327088|fgenesh1_pm.C_scaffold_6002308
Length=3156
Score = 1062 bits (575), Expect = 0.0
Identities = 868/1010 (86%), Gaps = 18/1010 (2%)
Strand=Plus/Plus
Query 469 GTTGATCAACAAGCGCTTTTGCCATCAGTCCGTGACCCTAAACTGTGGCTGGTGAAATGT 528
||||| ||||||||||||||||||||||| || ||||| ||| ||||| |||||||||||
Sbjct 499 GTTGAGCAACAAGCGCTTTTGCCATCAGTTCGCGACCCGAAATTGTGGATGGTGAAATGT 558
Query 529 GCGATTGGACGTGAAAGAGAAGTTGCTGTTTGTCTTATGCAAAAAATCGTAGATAGAGGA 588
|||||||| || ||||| || |||||||||||||||||||||||| | ||||| |||||
Sbjct 559 GCGATTGGTCGCGAAAGGGAGGTTGCTGTTTGTCTTATGCAAAAATTTATAGATCGAGGA 618
Query 589 TCAGAGTT-CAAGATTAGATCTGCTATTGCTCTTGATCATCTTCAA-AACTATGTATATA 646
| || || || ||||||||||| | |||| ||||| |||||| || || ||| |||||
Sbjct 619 GCTGATTTGCA-GATTAGATCTGTTGTTGCCCTTGACCATCTT-AAGAATTATATATATG 676
Query 647 TTGAAGCGGATATGGAAGCTCATGTGAAAGAGGCTATCAAGGGCATGCGGAATATTTATG 706
||||||| || | ||||||||||||||||||||| |||||||||||| ||||||| ||||
Sbjct 677 TTGAAGCAGACAAGGAAGCTCATGTGAAAGAGGCAATCAAGGGCATGAGGAATATATATG 736
Query 707 CTAATCAGAAGATTTTGCTTGTCCCCATAAAAGAAATGACTGCTGTTCTTTCTGTCGAGA 766
||||||||||||| || |||||||| |||| ||||||||| | ||| |||||||| || |
Sbjct 737 CTAATCAGAAGATCTTACTTGTCCCGATAAGAGAAATGACAGATGTGCTTTCTGTTGAAA 796
Query 767 GTAAAGCAATCGATTTATCCCGTGACT-CGTGGGTTAGAATGAAACTTGGGATATATAAG 825
| |||||||| ||| |||| || || | | ||||||||||||||| | |||| |||||
Sbjct 797 GCAAAGCAATTGATCTATCTCGGGA-TACCTGGGTTAGAATGAAAATCGGGACGTATAAA 855
Query 826 GGTGATCTAGCTCAGGTGGTTGATGTTGATAATGTACGTAAGAGGGTCACAGTCAAGTTG 885
|||||||| || |||| ||||| ||||||||||| ||| |||||||||||||||||||
Sbjct 856 GGTGATCTTGCAAAGGTAGTTGACGTTGATAATGTGCGTCAGAGGGTCACAGTCAAGTTA 915
Query 886 ATCCCAAGAATTGATCTGCAGGCTCTAGCCAATAAGCTGGAAGGAACAGAGAA-TGTCAA 944
||||||||||||||||||||||| ||||||| ||||||||| |||| ||||| | ||||
Sbjct 916 ATCCCAAGAATTGATCTGCAGGCACTAGCCAGTAAGCTGGACGGAA--GAGAAGTTTCAA 973
Query 945 -GAAGAAAGCTTTTGCTCCACCTCCACGTTTCATGAACATTGATGAGGCAAGGGAACTT- 1002
||| ||||| |||| |||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 974 AGAAAAAAGCCTTTGTTCCACCTCCACGTTTCATGAACATTGATGAAGCAAGGGAA-TTG 1032
Query 1003 CACATACGTGTTGAGCACCGGCGTGATCCAATGACGGGTGACTACTTTGAGAATATCGGT 1062
|||||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| |||
Sbjct 1033 CACATACGTGTTGAGCGTCGGCGTGATCCCATGACGGGTGATTACTTTGAAAATATTGGT 1092
Query 1063 GGAATGCTTTTCAAAGATGGTTTTCTTTACAAGAA-AGTATCGAC-GAAGTCCATTGCTG 1120
|| ||||||||||||||||||||| | ||||| || |||||| | ||||||||| |||
Sbjct 1093 GGCATGCTTTTCAAAGATGGTTTTATGTACAA-AACAGTATC-ATTGAAGTCCATCACTG 1150
Query 1121 CTCAGAATGTAACACCAACCTTCGATGAACTTGAAAGATTCAAGAGACCAAATGAAAATG 1180
||||||||| |||||||| || || |||||||||| |||||| | ||||| ||||||||
Sbjct 1151 TTCAGAATGTTACACCAACTTTTGACGAACTTGAAAAATTCAATAAACCAAGTGAAAATG 1210
Query 1181 GGGAGATCGACTTCGTTGATGAGTCGACTTTATTTGCAAATAGAAAGAA-GGGTCATTTC 1239
| ||| ||| || | || | ||| |||||||||||||| |||||||| ||| ||||||
Sbjct 1211 GAGAGGGCGATTTTGGTGGTCTGTCAACTTTATTTGCAAACAGAAAGAAAGGG-CATTTC 1269
Query 1240 ATGAAAGGTGATGCGGTTATTGTGATCAAGGGGGATCTTAAAAACTTGAAGGGCTGGATT 1299
||||| |||||||| |||||||| || ||||||||||| |||||||||||||| ||| ||
Sbjct 1270 ATGAAGGGTGATGCAGTTATTGTTATAAAGGGGGATCTGAAAAACTTGAAGGGTTGGGTT 1329
Query 1300 GAGAAAGTAGATGAAGAGAATGTCCTTATCAGATCAGAGATGAAAGATCTTCCTAATCCT 1359
||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||| |||||
Sbjct 1330 GAGAAAGTAGATGAAGAAAATGTCCTTATCAGATCAGAAATGAAAGGTCTCCCTGATCCT 1389
Query 1360 ATTGCGGTTAATGGGAGAGAGCTTTGTAAATACTTTGAACCTGGAAATTTTGTGAAGGTT 1419
|||| || |||| |||||||||||| || |||||||||||||||||| ||||||||||
Sbjct 1390 CTTGCTGTAAATGAGAGAGAGCTTTGCAAGTACTTTGAACCTGGAAATCATGTGAAGGTT 1449
Query 1420 GTGTCTGGCATCCATGAAGGAGGAACTGGCATGATTGTCAAAGTTGATCA 1469
|| ||||| | ||||||||||| ||| |||||| ||||||||||||||||
Sbjct 1450 GTTTCTGGGACCCATGAAGGAGCAACAGGCATGGTTGTCAAAGTTGATCA 1499
Score = 370 bits (200), Expect = 3e-101
Identities = 345/414 (83%), Gaps = 14/414 (3%)
Strand=Plus/Plus
Query 1522 GCTGATCATGTTGCCAAGAG-TGCAGAAGTGACTAA-AGGTGTCACAAAAATTGGGGACT 1579
||||||||||||| |||| | |||||||||| || ||||| || |||||||||||||
Sbjct 1516 GCTGATCATGTTGTTGAGAGCT-CAGAAGTGAC-AACTGGTGTTACCAAAATTGGGGACT 1573
Query 1580 ATGAACTTCATGATCTTGTGATTCTA-AGTGACTTTAGCTTTGGAGTAATCCTAAAACTT 1638
|||||||||||||||||||| |||| | | || | |||||||||||||| || |||
Sbjct 1574 ATGAACTTCATGATCTTGTGCTTCTGGA-TAACCTGAGCTTTGGAGTAATTATACGACTA 1632
Query 1639 GATAGTGAAGCTATCCAGATTCTTAAAGGGGTTCCTGACAG-CTCAGAGGTCT-CTATTG 1696
|| | ||||||| | ||| |||||||||||||||||||||| | ||||||| | || |||
Sbjct 1633 GAGAATGAAGCTTTTCAGGTTCTTAAAGGGGTTCCTGACAGAC-CAGAGGT-TGCTCTTG 1690
Query 1697 TCAAAGC-CAGCGAAATAAAATACAAAATTTG-GAAGAAAATCAATGTGCAAGACCGTTA 1754
||||| | ||| ||||| |||| ||||||| | ||||||||||||||| ||||| || ||
Sbjct 1691 TCAAA-CTCAGAGAAATCAAATGCAAAATT-GAGAAGAAAATCAATGTTCAAGATCGCTA 1748
Query 1755 CAAAAATGTCGTCGCGGTGAAAGATGTTGTCAGGGTCATTGAGGGTCCTAGCAAAGGTAA 1814
|||||||||| | || |||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1749 CAAAAATGTCATTGCTGTGAAAGATGACGTCAGAGTCATCGAGGGTCCTAGCAAAGGTAA 1808
Query 1815 ACAAGGTCCAGTGGTGCAAATCTACAAAGGAGTGTTGTTTATACATGACCGGCATAACCT 1874
||||||||| ||| ||| |||||||||||||| || |||||| |||| |||||| ||||
Sbjct 1809 ACAAGGTCCGGTGAAGCATATCTACAAAGGAGTCTTATTTATATATGATCGGCATCACCT 1868
Query 1875 TGAACACACTGGATTTATCTGCACTAGATGCTCATCTTGTGTTCTTGCTGGTGG 1928
||| || |||||||||||||| ||| |||| |||| || || ||| ||||||
Sbjct 1869 TGAGCATGCTGGATTTATCTGCGCTAAATGCACATCATGCATTGTTGTTGGTGG 1922
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112137681280
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5