BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G34360.1
Length=1443
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482381 jgi|Araly1|482381|fgenesh2_kg.4__1441__AT2G34360.1 2008 0.0
Ahg949805 jgi|Araly1|949805|scaffold_801692.1 1216 0.0
Ahg476510 jgi|Araly1|476510|fgenesh2_kg.2__1640__AT1G73700.1 518 6e-146
> Ahg482381 jgi|Araly1|482381|fgenesh2_kg.4__1441__AT2G34360.1
Length=1422
Score = 2008 bits (1087), Expect = 0.0
Identities = 1297/1395 (93%), Gaps = 28/1395 (2%)
Strand=Plus/Plus
Query 1 ATGAGGGAGGAGAGAGAGGATATGTTGTCATGGCCTCTGATCGGAGAGAAAGAGAAGAGA 60
|||| |||||||||||||||||||||||| ||||||||||||||||||||| || |||||
Sbjct 1 ATGACGGAGGAGAGAGAGGATATGTTGTCGTGGCCTCTGATCGGAGAGAAAAAGGAGAGA 60
Query 61 AGTAGATTTGTAAAGGAGGAAGTGGAGAAGCAGCTACTGTTGTCTGGACCACTAATCGCA 120
|||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 61 AGTAGATTAGTAAAGGAGGAAGTGAAGAAGCAGCTACTGTTGTCTGGGCCACTAATCGCA 120
Query 121 GTGAGTCTTCTTCAGTTTTGTCTGCAAATAATCTCAGTCATGTTCGTCGGCCATCTTGGC 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 121 GTGAGTCTTCTTCAGTTTTGTCTGCAAATAATCTCAGTCATGTTCGTCGGACATCTTGGC 180
Query 181 TCTCTTCCTCTATCCGCCGCCTCTATTGCCACCTCCTTCGCCTCCGTCACCGGCTTCACC 240
||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 181 TCTCTTCCTCTTTCTGCCGCCTCCATTGCCACCTCCTTCGCCTCCGTCACCGGCTTCACC 240
Query 241 TTCCTCATGGGAACAGCAAGTGCGATGGACACAGTTTGTGGTCAATCGTACGGAGCAAAA 300
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 241 TTCCTTATGGGAACAGCAAGTGCGTTGGACACAGTTTGTGGTCAATCGTACGGAGCAAAA 300
Query 301 ATGTACGGTATGTTAGGCATACAGATGCAAAGAGCAATGCTTGTTCTTACTCTTTTATCT 360
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 301 ATGTACGGAATGTTAGGCATACAGATGCAAAGAGCAATGCTTGTTCTTACTCTTTTCTCT 360
Query 361 GTTCCTCTCTCCATCGTTTGGGCCAACACAGAGCACTTCCTGGTCTTCTTCGGCCAAGAC 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 361 ATTCCTCTCTCCATCGTTTGGGCCAACACAGAGCACTTCCTTGTCTTCTTCGGCCAAGAT 420
Query 421 AAGTCCATTGCACACCTCTCTGGCTCCTACGCCAGATTCATGATCCCTAGCATCTTCGCC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AAGTCCATTGCACACCTCTCTGGCTCCTACGCCAGATTCATGATCCCTAGCATCTTCGCC 480
Query 481 TACGGTCTTCTTCAATGTCTCAACAGGTTTTTGCAGGCGCAGAACAATGTAATTCCTGTG 540
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 481 TACGGTCTTCTTCAATGTCTCAACAGGTTTTTGCAGGCGCAGAACAATGTGTTTCCTGTG 540
Query 541 GTTATCTGTTCTGGAGTCACCACTTCTCTTCACGTGATCATCTGTTGGGTCTTGGTGTTG 600
|| | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 541 GTGGTTTGTTCTGGAGTCACCACTTCTCTTCACGTGATCATCTGTTGGGCCTTGGTGTTG 600
Query 601 AAATCTGGTTTAGGGTTTAGAGGAGCTGCTGTCGCTAATGCGATCTCGTATTGGCTCAAT 660
|||||||||||||||||||||||||||||||| || |||||| | ||||| ||||| |||
Sbjct 601 AAATCTGGTTTAGGGTTTAGAGGAGCTGCTGTGGCGAATGCGGTATCGTACTGGCTTAAT 660
Query 661 GTCATTCTCTTGTCGTGTTACGTCAAGTTTTCGCCTTCTTGCTCCCTGACCTGGACCGGT 720
||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||
Sbjct 661 GTCATTCTCTTGTCGTGTTACGTCAAGTTTTCGTCTTCTTGCTCATTGACCTGGACTGGT 720
Query 721 TTCTCTAAGGAAGCTCGGCGCGATATCATCCCTTTTATGAAACTAGTTATTCCTTCTGCA 780
|||||||| || |||| || ||||||||||||||||||||| |||| |||||||||||||
Sbjct 721 TTCTCTAAAGAGGCTCAGCACGATATCATCCCTTTTATGAAGCTAGCTATTCCTTCTGCA 780
Query 781 TTTATGGTTTGCAGCTTAGAGATGTGGTCATTTGAGCTTTTGGTTCTCTCGTCAGGACTT 840
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 781 ATTATGGTTTGC---TTAGAGATGTGGTCCTTTGAGCTTTTGGTTCTCTCGTCAGGACTT 837
Query 841 CTTCCGAACCCGGTTCTAGAAACTTCT-T----G---TC--C-T-----C----G-AACC 879
||||||||||||||||||||||||||| | | || | | | | |||
Sbjct 838 CTTCCGAACCCGGTTCTAGAAACTTCTGTCCTTGCAATCTGCCTTAATACATCAGGAACA 897
Query 880 GTCTGGATGATCCCGTTTGGCCTTAGTGGCGCCGCTAGCACAAGGGTGTCAAATGAGTTA 939
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 898 GTCTGGATGATCCCGTTTGGCCTCAGTGGCGCCGCAAGCACAAGGGTGTCAAATGAGTTA 957
Query 940 GGATCAGGGAATCCGAAAGGGGCTAAGCTTGCGGTTCGCGTGGTCTTGAGCTTTTCCATC 999
||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 GGAGCAAGAAATCCGAAAGGGGCTAAGCTTGCGGTTCGCGTGGTCTTGAGCTTTTCCATC 1017
Query 1000 GTAGAGAGTATACTAGTTGGAACGGTCTTGATACTTATAAGGAAGATCTGGGGATTCGCA 1059
|||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||
Sbjct 1018 ATAGAGAGTATACTAGTTGGATCGGTTTTGATACTGATAAGGAAGATCTGGGGATTCGCT 1077
Query 1060 TACAGTAGTGACCCGGAAGTAGTCAGCCATGTAGCCTCGATGTTGCCGATTCTTGCCTTA 1119
|||||||||||||| ||||||| ||| |||||||||| |||||||||||||||||||||
Sbjct 1078 TACAGTAGTGACCCCGAAGTAGCCAGATATGTAGCCTCTATGTTGCCGATTCTTGCCTTA 1137
Query 1120 GGTCATTCCCTGGACAGCTTCCAAACCGTTCTTTCAGGGGTTGCGAGAGGATGTGGATGG 1179
||||| ||||| || ||||| |||| |||||||||||||||||| |||| ||||||||||
Sbjct 1138 GGTCACTCCCTAGATAGCTTTCAAAGCGTTCTTTCAGGGGTTGCTAGAGCATGTGGATGG 1197
Query 1180 CAGAAGATAGGAGCATTTGTGAATCTTGGATCATATTATCTTGTCGGAGTTCCGTTCGGT 1239
|||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 CAGAAGCTAGGCGCTTTTGTGAATCTTGGATCATATTATCTTGTCGGAGTTCCGTTCGGT 1257
Query 1240 TTATTACTTGGTTTTCACTTTCACGTCGGTGGTCGGGGGCTTTGGTTGGGAATTATATGT 1299
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 TTGTTACTCGGTTTTCACTTTCACGTCGGTGGTCGGGGGCTTTGGTTGGGAATTATATGT 1317
Query 1300 GCACTCA-TCGTTCAAGGTGTATGTCTTTCCCTCATCACCTTTTTTACAAATTGGGATGA 1358
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 GCACT-AGTCGTTCAAGGTGTATGTCTTTCCCTCATCACCTTTTTTACAAATTGGGATGA 1376
Query 1359 AGAGGTCAAGAAAGC 1373
|||||| || |||||
Sbjct 1377 AGAGGT-AA-AAAGC 1389
> Ahg949805 jgi|Araly1|949805|scaffold_801692.1
Length=1501
Score = 1216 bits (658), Expect = 0.0
Identities = 1217/1475 (83%), Gaps = 85/1475 (6%)
Strand=Plus/Plus
Query 11 AGA-GAGAGGAT-ATGTTGTCATGGCCTCTGATCGGAGAGAAAGAGAAGAGAAGTAGATT 68
||| |||||||| | |||||||||||| ||||| | | |||| | | ||||||
Sbjct 39 AGAGGAGAGGATGA-ATTGTCATGGCCTTTGATC---G-G--AGAG-A-A-AAGTAG--- 85
Query 69 TGTAAAGGAGGAAGTGGAGAAGCAGCTACT-G-TTGTCTGGACCACTAATCGCAGTGAGT 126
||| |||||||||||| |||||||| || | | || || || ||||| ||| | |||||
Sbjct 86 TGTCAAGGAGGAAGTGAAGAAGCAGATA-TGGCTT-TCGGGTCCACTCATCACCGTGAGC 143
Query 127 CTTCTTCAGTTTTGTCTGCAAATAATCTCAGTCATGTTCGTCGGCCATCTTGGCTCTCTT 186
||||||||||||||||| ||| | ||||| |||||||||||||| |||||||||||||||
Sbjct 144 CTTCTTCAGTTTTGTCTACAAGTTATCTCCGTCATGTTCGTCGGTCATCTTGGCTCTCTT 203
Query 187 CCTCTATCCGCCGCCTCTATTGCCACCTCCTTCGCCTCCGTCACCGGCTTCACCTTCCTC 246
||||| |||||||||||||| ||||| || |||||||| |||||||| |||| |||||||
Sbjct 204 CCTCTCTCCGCCGCCTCTATCGCCACTTCTTTCGCCTCAGTCACCGGTTTCAGCTTCCTC 263
Query 247 ATGGGAACAGCAAGTGCGATGGACACAGTTTGTGGTCAATCGTACGGAGCAAA-AATGTA 305
||||||||||||||||| | || ||| ||||||| ||| | ||||||||||| || |||
Sbjct 264 ATGGGAACAGCAAGTGCCTTAGATACACTTTGTGGCCAAGCTTACGGAGCAAAGAA-GTA 322
Query 306 CGGTATGTTAGGCATACAGATGCAAAGAGCAATGCTTGTTCTTACTCT-TTTATCTGTTC 364
||| |||||||| ||||| ||||||||||||||| |||||||||| || | ||| |||
Sbjct 323 CGGAATGTTAGGAATACAAATGCAAAGAGCAATGTTTGTTCTTACACTAGCT-TCTATTC 381
Query 365 CTCTCTCCATCGTTTGGGCCAACACAGAGCA-CTTCCTGGTCTTCTTCGGCCAAGACAAG 423
||||||||||| | ||||| ||||||||||| ||| || |||||||| || ||| ||||
Sbjct 382 CTCTCTCCATCATATGGGCTAACACAGAGCATCTT-CTCGTCTTCTTTGGACAAAACAAA 440
Query 424 TCCATTGC-ACACCTCTCTGGCTCCTACGCCAGATTCATGATCCCTAGCATCTTCGCCTA 482
|||||||| ||| ||| ||||||||||||| | |||||||||||| ||||||||||||||
Sbjct 441 TCCATTGCTACA-CTCGCTGGCTCCTACGCAAAATTCATGATCCCAAGCATCTTCGCCTA 499
Query 483 CGGTCTTCTTCAATGTC-TCAACAGGTTTTTGCAGGCGCAGAACAATGTAATTCCTGTGG 541
|||||| |||||||| | | ||||||||||||||||| || |||||||| |||||||||
Sbjct 500 CGGTCTCCTTCAATG-CTTTAACAGGTTTTTGCAGGCCCAAAACAATGTGTTTCCTGTGG 558
Query 542 TTATCTGTTCTGGAGTCACCACTTCTCTTCACGTGATCATCTGTTGGGTCTTGGTGTTGA 601
|| |||| ||||||||||||||||||||||| || || | |||||| ||||||| || |
Sbjct 559 TTTTCTGCTCTGGAGTCACCACTTCTCTTCATGTCCTCCTTTGTTGGATCTTGGTTTTTA 618
Query 602 AATCTGGTTTAGGGTTT-AGAGGAGCTGCTGTCGCTAA-TGCGATCTCGTATTGGCTCAA 659
||||||||||||||||| | |||||||||| | || || | | || ||||||||||| ||
Sbjct 619 AATCTGGTTTAGGGTTTCA-AGGAGCTGCTCTTGCCAACT-CCATTTCGTATTGGCTTAA 676
Query 660 TGTCATTCTCTTG-TCGTGTTACGTCAAGTTTTCGCCTTCTTGCTCCCTGACCTGGACCG 718
||||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 677 TGTCATTCTCTTGTTC-TGTTACGTTAAGTTTTCGCCTTCTTGCTCACTGACTTGGACCG 735
Query 719 GTTTCTCTAAGGAAGCTCGGCGCGATATCATCCCTTTTATGAAACTAGTTATTCCTTCTG 778
||||||||||||| |||| ||||||||| |||||||| ||| ||||| | |||||||||
Sbjct 736 GTTTCTCTAAGGAGGCTCTACGCGATATCCTCCCTTTTCTGAGACTAGCTGTTCCTTCTG 795
Query 779 CATTTATGGTTTGCAGCTTAGAGATGTGGTCATTTGAGCTTTTGGTTCTCTCGTCAGGAC 838
|| |||||| | | |||||||||||||||| ||||| |||| ||||||| |||||||
Sbjct 796 CACTTATGG--T-CTGCTTAGAGATGTGGTCCTTTGAATTTTTAGTTCTCTTATCAGGAC 852
Query 839 TTCTTCCGAACCCGGTTCTAGAAACTTC--TTGTC-C--TC-G-----A-AC--C--G-- 880
||||||| |||||||||||||||||||| || || | || | | || | |
Sbjct 853 TTCTTCCAAACCCGGTTCTAGAAACTTCTGTTCTCTCTATCTGCCTTAATACAGCAGGAA 912
Query 881 ---TCTGGATGATCCCGTTTGGCCTTAGTGGCGCCGCTAGCACAAGGGTGTCAAATGAGT 937
| ||||||||||| ||||| || |||||||| || ||||| ||| | || |||||||
Sbjct 913 CAATGTGGATGATCCCATTTGGTCTCAGTGGCGCTGCAAGCACGAGGATCTCGAATGAGT 972
Query 938 TAGGATCAGGG-AATCCGAAAGGGGCTAAGCTTGCGGTTCGCGTGGTCTTGA-GCTTTTC 995
||||| | ||| |||||||||| ||||||||||||||| || |||||| | | || ||
Sbjct 973 TAGGAGC-GGGTAATCCGAAAGTGGCTAAGCTTGCGGTGCGTGTGGTCAT-ATGC-ATTG 1029
Query 996 CA-TCGTAGAGAGTATACTAG-TTGGAACGGTCTTGATACTT-ATAAGGAAGATCTGGGG 1052
|| ||| ||| |||||| | | | ||| | | |||||| || |||||||| || |||||
Sbjct 1030 CAGTCGCAGAAAGTATAGT-GATCGGATCAATTTTGATA-TTGATAAGGAATATATGGGG 1087
Query 1053 ATTCGCATACAGTAGTGACCCGGAAGTAGTCAGC-CATGTAGCCTCGATGTTGCCGATTC 1111
||| || || |||||||| ||||||||||||| | | |||||||| ||| |||||||||
Sbjct 1088 ATTGGCTTATAGTAGTGAACCGGAAGTAGTCA-CTTACGTAGCCTCCATGATGCCGATTC 1146
Query 1112 TTGCCTTAGGTC-ATTCCCTGGACAG-CTTCCAAACCGTTCTTTCAGGGGTTGCGAGAGG 1169
| |||||||| | ||| || ||||| ||| ||| |||||| ||||||||||| |||||
Sbjct 1147 TCGCCTTAGG-CAATTTTCTAGACAGTCTT-CAATGCGTTCTCTCAGGGGTTGCTAGAGG 1204
Query 1170 ATGTGGATGGCAGAAGATAGGAGCATTTGTGAATCTTGGATCATATTATCTTGTCGGAGT 1229
||||||||||||||||||||||||| | | || ||||| |||||||||||||| |||||
Sbjct 1205 ATGTGGATGGCAGAAGATAGGAGCAATCATTAACCTTGGTTCATATTATCTTGTTGGAGT 1264
Query 1230 TCCGTTC-GGTTTATTACTTGGTTTTCACTTTCACGTCGGTGGTCGGGGGCTTTGG-TTG 1287
||| ||| || || ||||||| ||| ||||||||||| |||||||||||||||||| |||
Sbjct 1265 TCC-TTCAGGCTTGTTACTTGCTTTCCACTTTCACGTTGGTGGTCGGGGGCTTTGGCTTG 1323
Query 1288 GGAATTATATGTGCACTCATCGTTCAAGGTGTATG-TCTTTCCCTCATCACCTTTTTTAC 1346
| ||| |||||||| ||| | ||||||| | | || |||| ||||| ||||| |||||||
Sbjct 1324 G-AATCATATGTGCCCTCGTTGTTCAAGTTTT-TGGTCTTGCCCTCGTCACCATTTTTAC 1381
Query 1347 AAATTGGGATGAAGAGGTCAAGAAAGCTACCAGCCGAGCTAAGTCTTCTTCA-GAAGTAA 1405
||||||||||||||||| |||||||||||| | || | ||||||||||| | ||||
Sbjct 1382 AAATTGGGATGAAGAGGCCAAGAAAGCTACAAATAGAATTGAGTCTTCTTCAAGT-GTAA 1440
Query 1406 AGGAATT-TGCAGTAGACAACGGGTCAATTCTTGT 1439
|||| || |||| | || | ||||||||| ||||
Sbjct 1441 AGGA-TTCTGCACTTGATGATGGGTCAATTGTTGT 1474
> Ahg476510 jgi|Araly1|476510|fgenesh2_kg.2__1640__AT1G73700.1
Length=1604
Score = 518 bits (280), Expect = 6e-146
Identities = 673/856 (79%), Gaps = 53/856 (6%)
Strand=Plus/Plus
Query 36 TCTGATCGGAGAGAAAGAGAAGA-GAAGTAGATT--TGTAAAGGAGGAAGTGGAGAAGCA 92
||||||| ||||| ||||| || | | | |||| ||| |||||||||||| |||||||
Sbjct 36 TCTGATCACAGAGAGAGAGACGACG-A-T-GATTCGTGTGAAGGAGGAAGTGAAGAAGCA 92
Query 93 GCTACT-G-TTGTCTGGACCACTAATCGCAGTGAGTCTTCTTCAGTTTTGTCTGCAAATA 150
|||| | | || |||| |||||| || | || || |||||||| | | ||| ||| |
Sbjct 93 GCTA-TGGCTT-TCTGCACCACTCATTGGTGTTAGCCTTCTTCAATACTCTCTCCAAGTC 150
Query 151 ATCTCAGTCATGTTCGTCGGCCATCTTGGCTCTCTTCCTCTATCCGCCGCCTCTATTGCC 210
||||| |||||||||||||||||||| ||||||||||| || || ||||||||||| |||
Sbjct 151 ATCTCCGTCATGTTCGTCGGCCATCTCGGCTCTCTTCCCCTCTCTGCCGCCTCTATCGCC 210
Query 211 ACCTCCTTCGCCTCCGTCACCGGCTTCACCTTCCTCATGGGAACAGCAAGTGCGAT-GGA 269
|||||||||||||||||||||||||||||||||||| |||||||||| ||||| || |||
Sbjct 211 ACCTCCTTCGCCTCCGTCACCGGCTTCACCTTCCTCTTGGGAACAGCGAGTGC-ATTGGA 269
Query 270 CACAGTTTGTGGTCAATCGTACGGAGCAAAAATGTACGGTATGTTAGGCATACAGATGCA 329
||| | ||||| ||| |||||||||||||| | ||||| | || ||||| || |||||
Sbjct 270 GACACTATGTGGCCAAGCGTACGGAGCAAAACTATACGGAAAATTGGGCATCCAAATGCA 329
Query 330 AAGAGCAATGCTTGTTCTTACTCTTT-TATCTGTTCCTCTCTCCATCGTTTGGGCCAACA 388
||||||||| |||| ||| || | | |||||||||||||| ||| ||||||| ||||
Sbjct 330 GAGAGCAATGTTTGTACTT-CTAATACTCTCTGTTCCTCTCTCAATCATTTGGGCTAACA 388
Query 389 CAGAGCAC-TTCCTGGTCTTCTTCGGCCAAGACAAGTCCATTGCACACCTCT--CTGGCT 445
| || || ||| | || || || |||||||||||||||||| | | | ||||||
Sbjct 389 CCGAACAGATTC-TCGTATTGGTCCATCAAGACAAGTCCATTGCA-AG-TGTTGCTGGCT 445
Query 446 CCTACGCCAGATTCATGATCCCTAG-CATCTTCGCCTACGGTCTTCTTCAATGTC-TCAA 503
||||||| | || ||||||||| || | ||||||||||||| || |||||||| | ||||
Sbjct 446 CCTACGCTAAATACATGATCCCGAGTC-TCTTCGCCTACGGACTACTTCAATG-CATCAA 503
Query 504 CAGGTTTTTGCAGGCGCAGAACAATGTAATTCC-TGTGGTTATCTGTTCTGG-AGTCACC 561
|||||| ||||| |||||||||||||| |||| ||| || |||| ||||| | |||||
Sbjct 504 CAGGTTCTTGCAAGCGCAGAACAATGTC-TTCCCTGTCTTTGTCTGCTCTGGTA-TCACC 561
Query 562 ACTTCTCTTCACGTGA-T-CATCTGTTGGGTCTTGGTGTTGAA-ATCTGGTTTAGGGTTT 618
|||| |||||| | | | | |||||||| | || || ||||| | |||||||||| |
Sbjct 562 ACTTGTCTTCATTT-ACTTC-TCTGTTGGTTGTTTGTCTTGAAGA-CTGGTTTAGGATAC 618
Query 619 AGAGGAGCTGCTGTCGCTAA-TGCGATCTCGTATTGGCTCAATGTCATTCTCTTGTCGTG 677
||||| |||||| |||||| | || |||| || ||| |||| ||||||||| | || ||
Sbjct 619 AGAGGGGCTGCTCTCGCTATCT-CGGTCTCTTACTGGTTCAACGTCATTCTCCTCTCATG 677
Query 678 TTACGTCAAGTTTTCGCCTTCTTGCTCCC-TGACCTGGACCGG-TTTCTCTAAGGAAGCT 735
||| ||||||||||||||||||||||| | | | |||||||| ||| || ||||| |||
Sbjct 678 TTATGTCAAGTTTTCGCCTTCTTGCTCGCAT-AGTTGGACCGGGTTT-TCAAAGGAGGCT 735
Query 736 CGGCGCGA--TATCATCCCTTT-TATGAAACTAG-TTATTCCTTCTGCATTTATGGTTTG 791
| || | | || ||| | | ||| | | || ||||||| ||| | ||||| ||
Sbjct 736 TTTCAAGAACTTT-ATGA-TTTCTCTAAAATT-GCTT-TTCCTTCAGCAGTCATGGTCTG 791
Query 792 CAGCTTAGAGATGTGGTCATTTGAGCTTTTGGTTCTCT-CGTCAGGACTTCTTCCGAACC 850
|| ||| | ||||| || |||||| ||||||| | | ||||| |||||||| || |
Sbjct 792 T---TTGGAGCTTTGGTCCTTCGAGCTTCTGGTTCT-TGCCTCAGGCCTTCTTCCTAATC 847
Query 851 CGGTTCTAGAAACTTC 866
||||| ||||||||||
Sbjct 848 CGGTTTTAGAAACTTC 863
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53973877165
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5