BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G34780.1
Length=4191
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482441 jgi|Araly1|482441|fgenesh2_kg.4__1501__AT2G34780.1 5869 0.0
> Ahg482441 jgi|Araly1|482441|fgenesh2_kg.4__1501__AT2G34780.1
Length=4091
Score = 5869 bits (3178), Expect = 0.0
Identities = 3840/4149 (93%), Gaps = 88/4149 (2%)
Strand=Plus/Plus
Query 1 ATGGCGACGACCAATGCTCCACCTGAGCTAGCTTCAGGAAACCCTTGCTGCCTCGCTTGG 60
|||||| || ||||||||||||||||||| |||||||| |||||||||||| |||| |||
Sbjct 1 ATGGCGGCGGCCAATGCTCCACCTGAGCTGGCTTCAGGGAACCCTTGCTGCGTCGCGTGG 60
Query 61 CAAGGGAAGTACATAGGAATGAAGAAGAGGCGAGATGCTTTTAAAGAAGGAGTAACTCTT 120
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 61 CAAGGGAAGTACATAGGAATGAAGAAGAGGCGAGATGCTTTTAGAGAAGCCGTAACTCTT 120
Query 121 CTCCAGAAGGCTATAGAAAATGTTAATGCTGAAAAATCCAATCTCGAGAGAAAATTTGGG 180
||||||||||| |||| | ||| |||| |||| |||||||||||||||| |||| |||||
Sbjct 121 CTCCAGAAGGCCATAGCAGATGCTAATACTGAGAAATCCAATCTCGAGAAAAAACTTGGG 180
Query 181 GAGATGGCGACTGACGGAGATACTAAGGAAAATGGTTCAACTGTGAA-AGCATCTTTGGA 239
||||||||| |||| ||| ||||||| ||||| |||||| || || ||||||||||||
Sbjct 181 GAGATGGCGGTTGACAGAGGCACTAAGGCAAATGATTCAACGGT-AACAGCATCTTTGGA 239
Query 240 GAAAGAAATATCTCGTTTGAAGTTTGAGATAGTGTCTTTGCAACAAAAACTGGAGCGGAA 299
||||||||||||| ||||||||| ||||||| |||| ||||||||| || ||||||||||
Sbjct 240 GAAAGAAATATCTGGTTTGAAGTCTGAGATATTGTCATTGCAACAACAATTGGAGCGGAA 299
Query 300 CCTTAAAGAAAAAAGTGAAGAAACAAAGCTTCTTCAGGATCAAGCTTCTGGTCGAGAAAA 359
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 300 CCTTAAAGAAAAAAGTCAAGAAACAAAGCTTCTTCAGGATCAAGCTTCTCGTCGAGAAAA 359
Query 360 GGAGATCAATGAACTGAGGGATCTCCTTAAGAAAGAAACATTAAGGGCAGATAGTTCTGA 419
|||||||| |||||| | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 360 GGAGATCAGTGAACTAAAGGATCTCCTTAAGAAAGAAACATTAAGGGCAGATAATTCTGA 419
Query 420 AGAAGAGAGGGAACATGCTTTTAAGGAACTGAACAAGGCAAAGGCTCTGATAGTAAAAGA 479
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 AGAAGAGAGGGAGCATGCTTTTAAGGAACTGAACAAGGCAAAGGCTCTGATAGTAAAAGA 479
Query 480 TGAGGAAATCGAGCAAGATATTCCTGAAGT-AAAAAGGGAAATAAGTCTGGTTAAAAATC 538
|||||| ||| ||| | || |||||||||| | ||| |||||| ||||||||||||||||
Sbjct 480 TGAGGAGATCAAGCCACATGTTCCTGAAGTGAGAAA-GGAAATCAGTCTGGTTAAAAATC 538
Query 539 TTCTTGCTAGTgagagacagaagacagagtcagagaggaagaaagcagaatcagagaaaa 598
||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 539 TTCTTGCAAGTGAGAGGCAGAAGACAGAGTCAGAGAGAAAGAAAGCAGAATCAGAGAAAA 598
Query 599 agaaagCTGATAAGTATCTTTCGGAGTTGGAGGTGTTAAGAAATTCAGCTCATAAGACTA 658
| ||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||||
Sbjct 599 ATAAAGCTGATCAGTATCTTTCCGAGTTGGAGGTCTTAAGAACTTCAGCTCATAAGACTA 658
Query 659 GTTCTGATTTACTTACTTTGACCTCCAATCTTGAGACTGTaaaaaagcagcttgagcttg 718
|||||||||| |||| ||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 659 GTTCTGATTTGCTTATTTTAACCTCCAATCTTGAGACTATAAAAAAGCAGCTTGAGCTTG 718
Query 719 aaaaacagaagacactgaaagagaaaaaaCGTGCAGATATGGAGAGTGCAAAAGCTAGGG 778
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 AAAAACAAAAGACACTGAAAGAGAAAAAACGTGCAGATATGGAGAGTGCAAAAGCTAGGG 778
Query 779 ACCAGATGAAGCTGGCAGAAGATGTGTCTAAGAAGTTTGAAATCGTTAGAGCAAGAAATG 838
||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||
Sbjct 779 ACCAGATGAAGCTGGCAGAAGGTTTGTCTAAGAAGTTTGAAATCGTTAAAGCAAGAAATG 838
Query 839 AAGAGCTCAAGAAAGAAATGGAATCGCAGACCGCTAGTAGCCAAGTGAAGTTTGCTGAAA 898
||||||||| |||||||||||||||||||| |||||||||| |||| || ||||||||||
Sbjct 839 AAGAGCTCATGAAAGAAATGGAATCGCAGAGCGCTAGTAGCAAAGTAAAATTTGCTGAAA 898
Query 899 ACTCGGAAAAGCTGGAAGAGAAGATAAGGCTCCTTGAGATGAATaaaaaaaCAGCCATGG 958
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 899 ACTCGGAAAAACTGGAAGAGAAGATAAGGCTCCTTGAGATGAATAAGAAAACAGCCATGG 958
Query 959 ACTGGAAATCTCGTACTGATGATCTGACTCAACAGTTACAAGAAGCGCAATTAGTCG-CT 1017
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||| | ||
Sbjct 959 ACTGGAAATCTCGTGCTGATGATCTGACTCAGCAGTTACAAGAAGCGCAATTAGT-GACT 1017
Query 1018 GAAGGTTTGAAGAAACAAGTGCATGAGCTTTCACTTTCCCAGAAATCCATCAAGACTCAC 1077
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1018 GAAGGTTTGAAGAAACAAGTGCATGAGCTTTCACTTTCCCAAAAATCCATCAAGACTCAC 1077
Query 1078 TCTATTTCTCCTCAGAAAGTCAGAGACCTGGAAAAGGCTGAAATGAGGCTTTTGaaaaaa 1137
||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 TCTATCTCTCCTCAGGGAGTCAGAGACCTGGAAAAGGCTGAAATGAGGCTTTTGAAAAAA 1137
Query 1138 aaGATGAAGTTTGAGAGAAATTGTGCAAAACACTCCCAAACAGTGGCTAAATTTGAAAAG 1197
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1138 AAGCTGAAGTTTGAGAGAAATTGTGCAAAACACTCTGAAACAGTGGCTAAATTTGAAAAA 1197
Query 1198 TTTCGAAGGGAATTTCAGTGCGAAGAGCTAGGTCGGTTGAAACTGGAGTTCGGTAGTCTT 1257
|||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1198 TTTCGAAGGGAATTTCAGGGCGAAGAGCTAGGTCGGCTGAAACTGGAGTTTGGTAGTCTT 1257
Query 1258 ACGAATCGCATGAATCTACTGGATGAGTATTTTTCAACAGACGTTGAAGGTACAGCTGGC 1317
|| ||||||||||||||||| ||||||||||||||| || |||||||||||||||||||
Sbjct 1258 ACAAATCGCATGAATCTACTCAATGAGTATTTTTCAAGAGGCGTTGAAGGTACAGCTGGC 1317
Query 1318 CTTGGAAAGGCTACAGGATGCAGGAAACTGCTGACGCTAA-ATTCACAGAAGAACCGTAA 1376
|||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct 1318 CTTGAAAAGGCTACAGGATGCAGGAAACTGCAGACGCTCCCAT-CACAGAAGAACCGTAA 1376
Query 1377 TGGTGAAAAGCATTCTGACGCAAGATGCAAATTGGTAGCCAGCTCAGGTTATCAGGAGCA 1436
|||||||||||||||||||||||||||||| ||||| |||||||| |||| || ||||||
Sbjct 1377 TGGTGAAAAGCATTCTGACGCAAGATGCAATTTGGTTGCCAGCTCTGGTTCTCGGGAGCA 1436
Query 1437 GGCTTGCAAGTTGTCTGCCCACTTAATTTCTAAATCTGGACGGGGCGTGAGTGAGTCTGT 1496
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 GGCATGCAAGTTGTCTGCCCACTTAATTTCTAAATCTGGACGGGGCGTGAGTGAGTCTGG 1496
Query 1497 CTCAGGTACTATTTCTCAATTGGAGTCTCCTACTGGAGGCTCTAGAAAATTACCGAGTTC 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1497 CTCAGGTACTATTTCTCAATTGGAGTCTCCTACTGGAGGCTCTAGAAAATTACAGAGTTC 1556
Query 1557 TGGAGTAATTTCCAGCGCAACATCTTTTTCTGATGGGCAGTTACTGGCATCACAGGGAAG 1616
|||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1557 TGGAGTTATTTCCAGCGAAACATCTTTTTCTGATGGGCAGTTACTGGCCTCACAGGGAAG 1616
Query 1617 AGAGCAGTTCTCTGTTACTACTTCAGCAGAAATAGCAAAAGATAAACCGAATATCCAACC 1676
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 AGAGCAGTTCTCTGTTACGACTTCAGCAGAAATAGCAAAAGATAAACCGAATATCCAACC 1676
Query 1677 AACAAAATCAAGTATGCTCCA-AAAGATCTCCGATACCAGTAAAAATGGAAATCTCTGTT 1735
|||||||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||
Sbjct 1677 AACAAAATCAAGTATGTTCCAGAAA-ATCTCTGATACCAGTAAAAATGGAAATCTCTGTT 1735
Query 1736 TGGTGGCAGAAAACTATCTTCAAAGGTGTCAGAGAGATATTCATGAG--A----A----- 1784
||||||| |||||||||||||||||| |||||||||||| ||||||| | |
Sbjct 1736 TGGTGGCTGAAAACTATCTTCAAAGGCGTCAGAGAGATAGTCATGAGGTAGTTGATGAGA 1795
Query 1785 -CTCTCGGAAAAGAAAAAGAATGTTAGAGGCAGTTGTGTCCCATAAGCATCTGGCATCTG 1843
||||||||||||||||||||||||||||||||||||||| | ||||||| || ||||||
Sbjct 1796 ACTCTCGGAAAAGAAAAAGAATGTTAGAGGCAGTTGTGTCTCGTAAGCATTTGTCATCTG 1855
Query 1844 GTGATAAAAAGAAAAATTTGCCGATTGGAGAGAAGATGGGCAC-CTTGCAGTCCATGATT 1902
|||||| ||||||||||||| ||||||| |||||||| || | ||||||||| ||| ||
Sbjct 1856 ATGATAACAAGAAAAATTTGCAGATTGGAAAGAAGATGAGC-CGCTTGCAGTCTATGGTT 1914
Query 1903 GTAGGAACTGGGTCTAGGCCTTCAGAAAAGGAAGAAACCTTGGTCCCCCCTGATAGGCAA 1962
||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 1915 TTAGGAACTGGGTCTAGGCCTTTAGAAAAGGAAGAAACCTTGGTCCC---TGATAGGCAA 1971
Query 1963 GGTGGCTCCTCCGCAATTGACATTACAGTTTCCAAGAAAAGAAGGGTTTCTTGTAAGAAG 2022
|||||||||| |||| | || | |||||||||||||||||||||||||||||
Sbjct 1972 GGTGGCTCCTTCGCA---G---TT----T--CCAAGAAAAGAAGGGTTTCTTGTAAGAAG 2019
Query 2023 AAGATAATTGTACAGAATTCTCTTGAGTTCAACCAGTCAGGCAAGACTCCAGGTAATATA 2082
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2020 AAGACAATTATACAGAATTCTCTTGAGTTCAACCAGTCAGGCAAGACTCCAGGTAATATA 2079
Query 2083 GCTGGGAAAACTACGTGTCTCTCTACTGCTACTGGACATGACGTGAAAACATTATTTTCG 2142
||||||||||||||||| ||||||||||| | ||||||||||||| |||||||||| |
Sbjct 2080 GCTGGGAAAACTACGTGCCTCTCTACTGCCAAAGGACATGACGTGACAACATTATTTCCA 2139
Query 2143 GAGGACTTTGCTGCTACAGATTATATGAAGTTGCTAGAGTTGGATAACTTGGAAGAAGAA 2202
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2140 GAGGACGTTGCTGCTACAGATTATATGAAGTTGCTAGAGTTAGATAACTTGGAAGAAGAA 2199
Query 2203 AATTATTACCAGATGGCTAGAGAATCGCTTCTGTCCCCTGATCTTCCTCAGGTAGATTTT 2262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2200 AATTATTACCAGATGGCTAGAGAATCGCTTCTGTCCCCTGATCTTCCTCAGGTAGATTTT 2259
Query 2263 TTGGGTTGT-GAGATCATGAATGAGGACAAAAATCCTGCTAGGGCTATTGACTTGGCTGC 2321
|||||| || |||||| ||||||| ||||||||||||||||||| |||||||||||||
Sbjct 2260 TTGGGT-GTTGAGATCGTGAATGA---CAAAAATCCTGCTAGGGCTCTTGACTTGGCTGC 2315
Query 2322 CAGTAATAGCATGTATTTACGTGAGACCATACTTTCTAGTGAATCTCCTAGTCTCAACAC 2381
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2316 CAGTAATAGCATGTGTTTACGTGAGACCATACTTTCTAGTGAATCTCCTAGTCTCAACAC 2375
Query 2382 TCAGAAT-ATCTCAGTGACAGTTGAAATGCCACCCATGTTGAAACCGTTGCATGGGCATC 2440
|| |||| || | | | || || | ||| |||| | ||||||||
Sbjct 2376 TCTGAATGAT-T---T-A--GT-GA----C-ACC---GTTG---C------ATGGGCATA 2410
Query 2441 TTCTTAAACACTTTATTGTGTTTTCAAATATTGAAGACCAGAACAGTATCATCATAATAA 2500
|||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||
Sbjct 2411 TTCTTAAACACTTTGTTGTGTTTTCAAATATTGAAGACCAGAAAAGTATCATCAAAATT- 2469
Query 2501 TTC-ATGCTACTAACAATTGTCTACAGCGTTGCCCGTCAGTTACTAAAGAACAGTGGGCA 2559
||| |||| || ||||||||| ||||||| |||||||||||||||| |||||||||||||
Sbjct 2470 TTCCATGCAACAAACAATTGTGTACAGCGATGCCCGTCAGTTACTAGAGAACAGTGGGCA 2529
Query 2560 GTGCCAGCGATTTTGTCTTCTTTGAAAATGGAAGAAAACCTTTTGGCCCAGGAAAGGGCC 2619
|||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2530 GTGCCAGCGATTCTGTCTTCTTTGAAAATGGAAGAAAACCTTTTGGCCCGGGAAAGGGTC 2589
Query 2620 TGTGTGTTCCTCTCCTTGTTGCTGCATAACTTCTCCATGGTTCACACAACAAAAA-CTGG 2678
|||||||||||||||||| |||||||||||||||||||||||| | |||| |||| | |
Sbjct 2590 TGTGTGTTCCTCTCCTTGCTGCTGCATAACTTCTCCATGGTTCCCTCAACGAAAATCAGC 2649
Query 2679 GAATACTCTGAATGTTGATTCTTTCTCCTGCTTGGATTCTTTCTCAAAGCATATACGTGG 2738
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2650 -AATTCTCTGAATGTTGATTCTTTCTCCTGCTTGGATTCTTTCTCAAAGCATATATATGG 2708
Query 2739 TGTTATGGCTGATACTGAAGCTGGAGTTATGCTTTCTGGATTTTCGGAAGAACTCCTTTG 2798
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 2709 AGTTATGGCTGATACTGAAGCTGGAGTTATGCTTTCTGAATTTTCGGAAGAACTCCTTAG 2768
Query 2799 TCTTCTTCAGGACCTCCTTTCTGGGCAGCGGGTATTATTTTCGGTTAAATCCTCAGAAAC 2858
||||||||||||||||||||||| |||| |||| |||||||| |||||| ||||||||||
Sbjct 2769 TCTTCTTCAGGACCTCCTTTCTGCGCAGAGGGTGTTATTTTCTGTTAAACCCTCAGAAAC 2828
Query 2859 ATGTGAATCTGATTTAAGCATCCCTGTCACCCTGAATGGAGAAAATGTAGCTCTCGTCAA 2918
|| |||||||||||||||||| |||||||||||||||||| | ||||||||||||||||
Sbjct 2829 ATCTGAATCTGATTTAAGCATTTCTGTCACCCTGAATGGAGGATATGTAGCTCTCGTCAA 2888
Query 2919 CAAAATCGCTCTAACTGATCAATTGGTGGCCGGAAGCGCTATTTTGGCGGCAATATGTAC 2978
|||||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||
Sbjct 2889 CAAAATCGCTCTAATTGATCATTTGGTGGCCGGAAGCACTATTTTGGCAGCAATATGTAC 2948
Query 2979 TGCACTTGATCGTATTGGATATATCTGCGAAGCTTCCTTTGAAATCCTGCACAAGTACAG 3038
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2949 TGCACTTGATCGTGTTGGATATATCTGCGAAGCTTCCTTTGAAATCCTGCACAAGTACAG 3008
Query 3039 TCATGAGAAAACCTCAGTGCTACTGACCATTCTTCACGTTTTTGCTTACATTGCTGGAGA 3098
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3009 TCATGAGAATACCTCAGTGCTACTGACCATTCTTCACGTTTTTGCTTACATTGCTGGAGA 3068
Query 3099 GAAAATGGTGTTGTCTAGTGAGCATGGCATATCAATTGCAGTGTTGAAATACATTGTCAT 3158
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 3069 GAAAATGGTGTTGTCTAGTGAGCATGACATATCAATTGCAGTGTTGAAATCCATTGTCAT 3128
Query 3159 GTTTCTAGAAAACAAACATTTTGGTACTGTGGAGGGCAGTTCTC-GATTGCACCCAGGCA 3217
||||||||||||||||||||||||||||||||||| || ||||| | |||||||||||||
Sbjct 3129 GTTTCTAGAAAACAAACATTTTGGTACTGTGGAGGACAATTCTCAG-TTGCACCCAGGCA 3187
Query 3218 AGAACAAGTGTCCATTCTCAGACAGGTCTTCCTCGCTGGAGGCTATGGCATCTAAGCTCA 3277
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3188 AGATCAAGTGTCCATTCTCAGACAGGTCTTCCTCGCTGGAGGCTATGGCATCGAAGCTCA 3247
Query 3278 TGGAAATTCTTCAGGAATTTACTGAGTCTAATACTTTGCATAAAAGCTTGACTGGTTCAT 3337
|||||||||||||||| |||||| ||||| ||| ||||||| ||||||||||||||||||
Sbjct 3248 TGGAAATTCTTCAGGAGTTTACTCAGTCTTATAGTTTGCATCAAAGCTTGACTGGTTCAT 3307
Query 3338 TGGGTTCTAGCCACCTAGAGAAGACCGAGTTTAGGCCGGCACACAAAGATTTCCAGTGTG 3397
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3308 TGGGTTCTAGTCACCTAGAGAAGACCGAGTTTAGGCCGGCACACAAAGATTTCCAGTGTG 3367
Query 3398 TATTGACCAGGGATCAAAGTATCAATCTCTGTGACATTCTATCATTGGTGGAGCTTATTG 3457
|||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||
Sbjct 3368 TATTGACCAGGGATCAAAGTGTTAATCTCTGTGACATTCTGTCATTGGTGGAGCTTATTG 3427
Query 3458 CTTGTTATACGGCTTGGGATTGGACTAGTGCGAACATTGTTGCTCCACTGCTTAAGATGC 3517
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3428 CTTGTTATACGGCATGGGATTGGACTAGTGCGAACATTGTTGCTCCACTGCTTAAGATAC 3487
Query 3518 TGGGAATGCCATTGCCAATGAACCTCTCTGTTGCAATCGTCTCCCTTCTTGGGCAACTTA 3577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3488 TGGGAATGCCATTGCCAATGAACCTCTCTGTTGCAATCGTCTCCCTTCTTGGGCAACTTA 3547
Query 3578 GCAGTATTGGAGTGGATGCTGGTGGCTATGAAAACGAAGGAATCTCAAACTTGAGAGTGA 3637
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 3548 GCAGTATTGGAGTGGATGCTGGTGGCTATGAAAACAAAGGAATCTCAAACTTGAGAGCGA 3607
Query 3638 AACTGTCAGCATTTCTACAGTGTGAGACGACACTAAAGGCCGGTTTTGCAGTGCAGATAG 3697
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3608 AACTGTCAGCATTTCTGCAGTGTGAGACGACACTAAAGGCCGGTTTTGCAGTGCAGATAG 3667
Query 3698 CAACTGTGAGCTCCCTCCTGAAGACGCTGCAGCTGAAATTCCCAATAGACTTTCAAGACA 3757
||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct 3668 CAACTGTGAGCTCCCTCCTGAAGACGCAGCAGCTGAAGTTCCCAATAGATTTTCAAGACA 3727
Query 3758 AAACCACCATGATTCCGGGTAGTGGCGACCAAAGCTTATCTGGTTCAGTCAATGTGGTGA 3817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3728 AAACCACCATGATTCCGGGTAGTGGCGACCAAAGCTTATCTGGTTCAGTCAATGTGGTGA 3787
Query 3818 CCAAGTGGTTGTCGTTGTTGAGCAAGGAACAACGAGTTTTCGCATTTGAGTTTCT-ACAA 3876
||||||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||
Sbjct 3788 CCAAGTGGTTGTCGTTGTTGAGCAATGAACAACGAGTTTTCGCTTTTGAGTT-CTTACAA 3846
Query 3877 ACCAATGTTGTTAGATGATTCCTCAGTTCAAAAAGTCATCA--AAA-GCAGTAAA-TTTT 3932
| |||||||||||||||||||||||||||||||||||| ||| || ||||| ||||
Sbjct 3847 ATTTCTGTTGTTAGATGATTCCTCAGTTCAAAAAGTCATCATCAAAAGCGGTAAAATTTT 3906
Query 3933 -GGACATAGTCTCTTACTGTTTGATTCTTCATTGACTGCCTCCTTTGGT-CATAGGATGA 3990
||| ||||||||||| ||||||||||||||||||||| ||||||||| | |||||||
Sbjct 3907 TGGAGATAGTCTCTTAATGTTTGATTCTTCATTGACTGATTCCTTTGGTTC-TAGGATG- 3964
Query 3991 TGCAGATATGAATGAAGATTGCATTGAGGTTCCAATTTTTTCTATTATTTAAAATTGGAG 4050
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 3965 --CAGATATGAATGAAGATTGCATTGAGTTTCCAATTTTTTCTATTATTTAAAATTGGGG 4022
Query 4051 CTTTGTGTTTGTGGTGACAATAGTATAAACCACTACACGATTTGTGTCTAATTCAGAATG 4110
||||||||||||||||||| ||||| ||| || || ||||| |||| ||||||||||||
Sbjct 4023 CTTTGTGTTTGTGGTGACATTAGTACAAAACAGTAAACGATATGTGGCTAATTCAGAATC 4082
Query 4111 TTAAGCAAA 4119
|||||||||
Sbjct 4083 TTAAGCAAA 4091
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 158471733972
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5