BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G34970.1
Length=2475
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482461 jgi|Araly1|482461|fgenesh2_kg.4__1521__AT2G34970.1 3483 0.0
Ahg493035 jgi|Araly1|493035|fgenesh2_kg.7__2468__AT4G18300.1 2049 0.0
> Ahg482461 jgi|Araly1|482461|fgenesh2_kg.4__1521__AT2G34970.1
Length=2347
Score = 3483 bits (1886), Expect = 0.0
Identities = 2232/2391 (93%), Gaps = 56/2391 (2%)
Strand=Plus/Plus
Query 26 GAGGAGATATGGGTGCTCAGAAGAAAGGCGGCGCCGCCGCTAGGGTTTCAGAGGATGCGG 85
||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||
Sbjct 1 GAGGAGATATGGGTGCTCAGAAGAAAGGCGGCG--G-CGCTAGGGTTTCGGAGGATGCGG 57
Query 86 AGGTACAGAGTCGCCACCGATTGCAAGCAATTCTTCTTGCCGACAGTTTCGCCACGAAAT 145
|| ||||||||| || |||||||||||||||||||||||||| || |||||||| ||||
Sbjct 58 TGGAACAGAGTCGTCAACGATTGCAAGCAATTCTTCTTGCCGATAGCTTCGCCACAAAAT 117
Query 146 TTCGTCCCGTAACCCTAGAACGCCCAAAGGTACTGTTACCGATAGTTAATGTTCCGATGA 205
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 118 TTCGTCCCGTAACCCTAGAACGCCCAAAGGTACTATTGCCGATAGTTAATGTTCCGATGA 177
Query 206 TTGATTACACATTGGCATGGCTCGAATCTGCTGGAATAGAGGAGGTTTTCGTCTTCTGTT 265
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 TTGATTATACATTGGCATGGCTCGAATCTGCTGGAATAGAGGAGGTTTTCGTCTTCTGTT 237
Query 266 GTGCTCATTCGATGCAGGTTATCGAATATCTGGAGAAATCCGAGTGGTATTCGCATCCAA 325
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct 238 GTGCTCATTCGATGCAGGTTATCGAATATCTGGAGAAGTCCGAGTGGTACTCGCACCCAA 297
Query 326 ACTTGCTTGTGAGAACGATTGAGTCGCACAAATCCATCAGTGCTGGAGATGCTTTGCGTT 385
|||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||
Sbjct 298 ACTTGCTTGTGAGAACAATCGAGTCGCATAAATCCATCAGTGCTGGAGATGCTTTGCGTT 357
Query 386 ACATGTATGAACAACAGACAGAGACGTCTCAGATTCAAGGTGATTTCGTTCTTGTTAGTG 445
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 358 ACATGTATGAGCAACAGACAGAGACGTCTCAGATTCAAGGTGATTTTGTTCTTGTTAGTG 417
Query 446 GAGATACTGTGAGTAATATGCCACTTGCTGATTTGATTCAAGAGCATAGAGAGAGGAAGA 505
||||||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||
Sbjct 418 GAGATACTGTGAGTAATATGCCACTAGCTGATTTGATTAAAGAACATAGAGAGAGGAAGA 477
Query 506 AGAAAGATGAGAAAGCTATTATGACTATGGTTATTAAGCAGTCTAAATCTTCTCCACTTA 565
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 478 AGAAAGATGAGAAAGCTATCATGACTATGGTTATTAAGCAGTCTAAATCTTCTCCACTCA 537
Query 566 CGCATCAGTCAAGATTAGGAACAGATCAGCTTTTCATTGCTGTTGATCCTTTGACAAAGC 625
|||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||
Sbjct 538 CGCATCAGTCAAGATTAGGAACGGATCAGCTCTTCATTGCTGTAGATCCTTTGACAAAGC 597
Query 626 AGCTTCTTCATTACGAGGAAGATAAGATTGATCATCCAAGTGGGTCAGTTTGCTTAGAGA 685
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 598 AGCTTCTTCATTACGAGGAAGATAAGATTGATCATCCAAGTGGGTCAGTTTGTTTAGAGA 657
Query 686 AGTCATTGTTGGATACTAATCCTTCTGTTTTAGTATGCAATGATATGCAGGATTGCTACA 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 AGTCATTGTTGGATACTAATCCTTCTGTTTTAGTATGCAATGATATGCAGGATTGCTACA 717
Query 746 TTGACATATGTTCTCCTGAAGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAACATC 805
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 718 TTGACATATGTTCTCCTGAGGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAACATC 777
Query 806 TGCGTCGTCATTTTGTCAAAGGTGTGCTTGTGGATGATATTATGGGTTATAAAATCTTCA 865
||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||
Sbjct 778 TGCGTCGTCATTTTGTCAAAGGTGTGCTTGTTGATGATATCATGGGTTATAAAATTTTCA 837
Query 866 CTCATGAGATTCACTCGAGCTATGCTGGTAGGATTGATAATTTCCGAAGCTATGACACTG 925
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 838 CTCATGAGATTCACTCCAGCTATGCTGGTAGGATTGATAATTTCCGCAGCTATGACACTG 897
Query 926 TTAGCAAGGATATAATTCAGAGGTGGACATATCCTTATGTACCAGATATTAATTTCAGTG 985
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 898 TTAGCAAGGATATAATTCAGAGGTGGACATATCCTTATGTACCAGATATAAATTTCAGCG 957
Query 986 GAAATCGGCCTCTAAAGCTCGGGAGACAAGGGATATACAAGGCTTCTGATGTAGTTCAAT 1045
||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 958 GAAATCGGCCTCTTAAGCTCGGGAGACAAGGGATATACCGGGCTTCTGATGTAGTTCAAT 1017
Query 1046 CACGATCTGCTGATGTTGGAGCTTCTACTGTCATTGGATACGGTACGAAAATTGGTCATG 1105
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||
Sbjct 1018 CACGATCTGCTGATGTTGGAGCTTCTACCGTCATTGGATACGGCACGAAAATTGGTAATG 1077
Query 1106 GGGATAAAATCAT-GAACTCGGTTATTGGGAATGGATGCTCTATTGGATCAAATGTGGTG 1164
||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1078 GGGATAAAATC-TCGAACTCGGTTATTGGGAATGGATGTTCTATTGGATCAAATGTCGTG 1136
Query 1165 ATTGAAGGCTCATACATATGGAACAATGTTACTATTGAAGATGGGTGTGAGATAAGGAAC 1224
|| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1137 ATAGAAGGCTCATACATATGGAATAATGTTACGATTGAAGATGGGTGTGAGATAAGGAAC 1196
Query 1225 GCTATTGTGTGTGATGGGGTGAAAATCAGAGCAGGAGCTGTTCTGCAGCCTGGTGTTGTT 1284
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 GCTATTGTCTGTGATGGAGTGAAAATCAGAGCAGGAGCTGTTCTGCAGCCTGGTGTTGTT 1256
Query 1285 TTGTCTTTCAATGTTGTAGTTGGACGGGACTTTGTTGTGCCTGCATACTCAAAGGTTTCC 1344
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1257 TTGTCTTTCAATGTTGTAGTTGGGCGGGACTTTGTTGTGCCTGCATACTCAAAGGTTTCC 1316
Query 1345 CTACTTCAACAGCCAACGACAGAAGACAGTGATGAAGAGCTGGAATATGCTGATAGTAGC 1404
||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||
Sbjct 1317 CTACTTCAACAGCCAACAACAGAAGATAGCGATGAAGAGCTGGAATATGCTGATAGTAGC 1376
Query 1405 AGCGGGACTGCGGATCATTTGTCAGGCCTAAATCTGCAAATGGAGTCCAAAGCATCTGAG 1464
||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1377 AGCGGGACTGCAGATCATTTGGCAGGCCTAAATTTGCAAATGGAGTCCAAAGCATCTGAG 1436
Query 1465 CTTGGTCCTGATGGAGCAGGTTACATATGGGAAGTATGTGAAGGGGCTCATGATGAGGAG 1524
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1437 CTTGGTCCTGATGGAGCAGGTTACATATGGGAAGCATGTGAAGGGGCTCATGATGAGGAG 1496
Query 1525 TGGAAGCATTCTGTTGCACCAATCCCCAAGGATAAACTTTCTGAGATTACTCAGGCCATA 1584
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 1497 TGGAAGCATTCTGTTGCACCAATCCCGAAGGATAAACTTTCTGAGATTACCCAGGCCATA 1556
Query 1585 GACGATGATGACACAGATGATGAAAGTGTCGTCCCGACTTCTGGAGAGTTGAAATCTGAT 1644
|||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||
Sbjct 1557 GACGATGATGACACTGATGATGAAAGTGTTGTCCCGGCTTCTGGAGAGTTGAAATCTGAT 1616
Query 1645 GCTGATAGTATTAACACTGATGTGAATGATCCCAATGATGATTACTATTACTTTGAGAAA 1704
|| |||||||| ||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1617 GCGGATAGTATAAACACTGATGTGAATGATCCCAATGATGACTATTATTACTTTGAGAAA 1676
Query 1705 GAGGTTGAAGGGACCGTCTTAAGGGCTGTTGAAGAGAATATCAAAGTGGACCTTGTAACT 1764
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 GAGGTTGAAGGTACCGTCTTAAGGGCTGTTGAAGAGAATATCAAAGTGGACCTTGTAACT 1736
Query 1765 ATGGAGATTAACGGGCTGCGGTTGTCATTCAACATGGAATCTGCAGATTGTGCTGGAGCA 1824
|||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 1737 CTGGAGATTAACGGGCTCCGGTTGTCATACAACATGGAATCTGCAGATTGTGCTGGAGCA 1796
Query 1825 ACATTTTTCTCGATGATAAAACTGGCACTTGATACTCCACACAATTCTGGTAGTGAGTTG 1884
||||| | ||||||||| ||||||||| |||||||||||||||| |||| ||||||||||
Sbjct 1797 ACATTCTACTCGATGATTAAACTGGCAGTTGATACTCCACACAACTCTGCTAGTGAGTTG 1856
Query 1885 TATAAAAACGCAGCGAGTATCATTACAAAATGGAAGGATCTTCTTGGCTTCTACGCAAAG 1944
||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| | ||||
Sbjct 1857 TATAAAAACGCGGCGAGTATCATTACAAATTGGAAGGAACTTCTTGGATTCTATGTAAAG 1916
Query 1945 AAAATTGATGAACAGATAGAAGTGATCATGAAATTTGAAGAGATGTGTCAGGAATCTCAC 2004
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1917 AAAATTGATGAACAGATAGAAGTGATTATGAAATTTGAAGAGATGTGTCAGGAATCTCCC 1976
Query 2005 AAAGAGTTGGGCCCTTTGTTCACACAAATTCTACATCTTCTATATGACAAGGACGTGTTG 2064
|||||||||||||||||||| ||||| ||||| ||||||||||||||||| ||||| |||
Sbjct 1977 AAAGAGTTGGGCCCTTTGTTTACACAGATTCTGCATCTTCTATATGACAAAGACGTCTTG 2036
Query 2065 CAAGAAGATGCGA-TAC-TGAGATGGGAGGAAGAGAAGGCAGGCGCGGATGAAGCTGACA 2122
||||||||||| | | | | ||||||| |||||||| |||||||| |||||||||||||
Sbjct 2037 CAAGAAGATGC-AGT-CTTAAGATGGGCTGAAGAGAAAGCAGGCGCAGATGAAGCTGACA 2094
Query 2123 AAGTATATCTGAAACAATGTGATACATTCATACAGTGGCTCAAAGAAGCATCTGAGGAGg 2182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2095 AAGTATATCTGAAACAATGTGATACATTCATACAGTGGCTCAAAGAAGCATCTGAGGAGG 2154
Query 2183 aagatgaagatgatgaagatgaagaagaagaagaagatAACTGAATTGGTATACCTGAGT 2242
|||||||||||||||||||||||||||| || ||||||||||| ||||||||
Sbjct 2155 AAGATGAAGATGATGAAGATGAAGAAGATGA---------CTGAATTGGTAAACCTGAGT 2205
Query 2243 TCGATGGCTCTCAACTAGTTGTTCATTATGCAGTTGATGGCCTCACATTTTGATTGATCA 2302
|||||||||||||| | | | | | | | ||||||||||||||||
Sbjct 2206 TCGATGGCTCTCAA-T-G--G--C------C--T------C---ACATTTTGATTGATCA 2242
Query 2303 TTTACTTTTAAGAGC--TACTCTGTTTTTTGTTCTGTCATCATCAATAAT--Cttttttt 2358
|||||||||||||| |||||||||||| | ||| |||| |||||||| ||||||||
Sbjct 2243 TTTACTTTTAAGAGTGATACTCTGTTTTT-G--CTG-CATCGTCAATAATTTCTTTTTTT 2298
Query 2359 CTTCATGTCTTC---TGT-T-CTGTTGCTTCATGAGATACTTTCTCATCCA 2404
|| | | ||| ||| | ||||||||| |||||||| |||||||||||
Sbjct 2299 TTTTTT-T-TTCCGATGTCTTCTGTTGCTTGATGAGATATTTTCTCATCCA 2347
> Ahg493035 jgi|Araly1|493035|fgenesh2_kg.7__2468__AT4G18300.1
Length=2136
Score = 2049 bits (1109), Expect = 0.0
Identities = 1859/2207 (84%), Gaps = 107/2207 (5%)
Strand=Plus/Plus
Query 34 ATGGGTGCTCAGAAGAAAGGCGGCGCCGCCGCTAGGGTTTC-AGAGGATGCGGAGGTA-C 91
|||||||||||||||||| | ||||| ||||||| ||| ||| ||| |||||| | |
Sbjct 1 ATGGGTGCTCAGAAGAAA--C-CCGCCGTGGCTAGGG-TTCGAGATGATTCGGAGG-ATC 55
Query 92 AGAGTCGCCACCGATTGCAAGCAATTCTTCTTGCCGACAGTTTCGCCACGAAATTTCGTC 151
|| ||| || || || ||||| || |||| || ||||| ||| |||| |||| ||||
Sbjct 56 TGACTCGTCAACGGTTACAAGCCATAGTTCTAGCGGACAGCTTCACCACTCAATTCCGTC 115
Query 152 CCGTAACCCTAGAACGCCCAAAGGTACTGTTACCGATAGTTAATGTTCCGATGATTGATT 211
|| |||||||||||||||| |||||||| || ||| |||| || | |||||||||||||
Sbjct 116 CCATAACCCTAGAACGCCCTAAGGTACTATTGCCGCTAGTGAACATCCCGATGATTGATT 175
Query 212 ACACATTGGCATGGCTCGAATCTGCTGGAATAGAGGAGGTTTTCGTCTTCTGTTGTGCTC 271
|||| || |||||||||||||| |||||||| || || ||||||| |||||||||| ||
Sbjct 176 ACACTTTAGCATGGCTCGAATCAGCTGGAATCGAAGATATTTTCGTGTTCTGTTGTGTTC 235
Query 272 ATTCGAT-GCAGGTTATCGAATATCTGGAGAAATCCGAGTGGTA-T-TCG--C--ATCCA 324
| ||| | ||||| ||||| || || ||||||||||| ||||| | || | | |||
Sbjct 236 ACTCG-TCCCAGGTCATCGATTACCTAGAGAAATCCGAATGGTACTCACGCTCAAACCCA 294
Query 325 AACTTGCTT-GTGAGAACGATTGAGTCGCACAAATCCATCAGTGCTGGAGATGCTTTGCG 383
|||||| || ||||||||||| | ||| | |||||||| ||||| |||||||||| ||||
Sbjct 295 AACTTG-TTGGTGAGAACGATAGTGTCTCCCAAATCCACCAGTGTTGGAGATGCTCTGCG 353
Query 384 TTACATGTATGAACAACAGACAGAGACGTCTCAGATTCAAGGTGATTTCGTTCTTGTTAG 443
||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 354 TTATATATATGAACAACAGACAGAGACGTCTCAGATTCAAGGTGATTTTGTTCTTGTTAG 413
Query 444 TGGAGATACTGTGAGTAATATGCCACTTGCTGATTTGATTCAAGAGCATAGAGAGAGGAA 503
||| |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 414 TGGGGATACTGTTAGTAATATGCCACTTGCTGATTTGATTCAAGAACATAGAGATAGGAA 473
Query 504 GAAGAAAGATGAGAAAGCTATTATGACTATGGTTATTAAGCAGTCTAAATCTTCTCCACT 563
||||||||||||||||||||| |||||||||||||||||| || | | | |
Sbjct 474 GAAGAAAGATGAGAAAGCTATCATGACTATGGTTATTAAGAAG-C---A----GT---C- 521
Query 564 TACGCATCAGTCAAGATTAGGAACAGATCAGCTTTTCATTGCTGTTGATCCTTTGAC-AA 622
|| | | | | | |||||||| | ||||| || |||||||| || |||||||| || ||
Sbjct 522 TA-G-A-C--T-AGGATTAGGATCTGATCAACTCTTCATTGCGGTAGATCCTTTAACGAA 575
Query 623 AGCAGCTTCTTCATTACGAGGAAGATAAGAT-TGATCATCCAAGTGGGTCAGTTTGCTTA 681
| |||||| ||| ||||||||||| | | || || || | | ||| | |||||||||
Sbjct 576 A-CAGCTTGTTCGTTACGAGGAAGGT-A-ATGCGAGAAT-C--G-GGGAC-GTTTGCTTA 627
Query 682 GAGAAGTCATTGTTGGATACTAATCCTTCTGTTTTAGTATGCAATGATATGCAGGATTGC 741
|| |||||||||||||||| | | |||||||| ||||||||||||||||||||||
Sbjct 628 GATAAGTCATTGTTGGATAGT-A-----CTGTTTTACTATGCAATGATATGCAGGATTGT 681
Query 742 TACATTGACATATGTTCTCCTGAAGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAA 801
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 682 TACATTGACATTTGTTCTCCTGAGGTGCTTAGTCTCTTTGAGGATAACTTTGATTATCAA 741
Query 802 CATCTGCGTCGTCATTTTGTCAAAGGTGTGCTTGTGGATGATATTATGGGTTATAAAATC 861
|||||||| |||||||||||||| ||| ||||||| ||||||||||||||||| || ||
Sbjct 742 CATCTGCGCCGTCATTTTGTCAATGGTTTGCTTGTTGATGATATTATGGGTTACAAGATT 801
Query 862 TTCACTCATGAGATTCACTCGAG---CTATGCTGGTAGGATTGATAATTTCCGAAGCTAT 918
|| |||||||||||||| ||||| |||||| |||||||| ||||| || ||||||
Sbjct 802 TTTACTCATGAGATTCAGTCGAGTTTTTATGCTACAAGGATTGAAAATTTACGGAGCTAT 861
Query 919 GACACT-GTTAGCAAGGATATAATTCAGAGGTGGACATATCC-TTATGTACCAGATATTA 976
|| | | ||||||||| ||||||| |||||||||||||| || || ||||| ||||| |
Sbjct 862 GATA-TGGTTAGCAAGAATATAATCCAGAGGTGGACATACCCGTT-CGTACCTGATATCA 919
Query 977 ATTTCAGTGG-AAATCGGC-CTCTAAAGCTCGGGAGACAAGGGATATACAAGGCTTCTGA 1034
||||||| || |||| || |||||| |||||||||||| ||||||||| |||||||||
Sbjct 920 ATTTCAGCGGAAAAT--GCTCTCTAATGCTCGGGAGACAGGGGATATACCGGGCTTCTGA 977
Query 1035 TGTAGTTCAATCACGATCTGCTGATGTTGGAGCTTCTACTGTCATTGGATACGGTACGAA 1094
|| |||||||||||| ||||||||| |||||||||| ||||||||||||||||| || |
Sbjct 978 TGCAGTTCAATCACGCTCTGCTGATATTGGAGCTTCCACTGTCATTGGATACGGCACCAG 1037
Query 1095 AATTGGTCATGG-GGATAAAATCATGAACTCGGTTATTGGGAATGGATGCTCTATTGGAT 1153
||||||| |||| || ||||||| | ||||| ||||||||||||||||| ||||||||||
Sbjct 1038 AATTGGTAATGGAGG-TAAAATCTTTAACTCTGTTATTGGGAATGGATGTTCTATTGGAT 1096
Query 1154 CAAATGTGGTGATTGAAGGCTCATACATATGGAACAATGTTACTATTGAAGATGGGTGTG 1213
||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1097 CAAATGTCGTGATAGAAGGCTCGTACATATGGAACAATGTTACGATTGAAGATGGGTGTG 1156
Query 1214 AGATAAGGAACGCTATTGTGTGTGATGGGGTGAAAATCAGAGCAGGAGCTGTTCTGCAGC 1273
|||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1157 AGATAAGGAATGCTATTGTCTGTGATGGAGTGAAAATCAGAGCAGGAGCTGTTCTGCAGC 1216
Query 1274 CTGGTGTTGTTTTGTCTTTCAATGTTGTAGTTGGACGGGACTTTGTTGTGCCTGCATACT 1333
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct 1217 CTGGTGTTGTTTTGTCTTTCAATGTTGTAGTTGGGCGGGACTTTGTTGTACCTGCATATT 1276
Query 1334 CAAAGGTTTCCCTACTTCAACAGCCAACGACAGAAGACAGTGATGAAGAGCTGGAATATG 1393
||||||| || |||||||||||||||| ||||||||||| ||||||||| |||||||||
Sbjct 1277 CAAAGGTCTCTTTACTTCAACAGCCAACTACAGAAGACAGCGATGAAGAGATGGAATATG 1336
Query 1394 CTGATAGTAGCAGCGGGACTGCGGATCATTTGTCAGGCCTAAATC-T--GCAAATGGAGT 1450
||| ||||||||||| |||||| |||| ||| ||||| ||||| | |||||| ||||
Sbjct 1337 CTGGTAGTAGCAGCGAGACTGCAGATCTTTTATCAGGTGTAAATAATTTGCAAATTGAGT 1396
Query 1451 CCAAAGCATCTGAGCTTGGTCCTGATGGAGCAGGTTACATATGGGAAGTATGTGA-AGGG 1509
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |
Sbjct 1397 CCAAAGCATCTGAGCTTGGTCCTGATGGAACAGGTTACATATGGGAAGTATGTGACAGCG 1456
Query 1510 GCTCATGATGAGGAGTGGAAGCATTCTGTTGCACCAATCCCCAAGGATAAACTTTCTGAG 1569
||||||||||||||||||| |||||||||| ||||||||||| |||||||||| | ||
Sbjct 1457 -CTCATGATGAGGAGTGGAAACATTCTGTTGTACCAATCCCCATGGATAAACTTGCCGAT 1515
Query 1570 ATTACTCAGGCCATAGACGATGATGACACAGATGATGAAAGTGTCGTCCCGACTT-CTGG 1628
|| ||||||||||| ||||||||||||| ||| ||||||||||| ||||| || | ||||
Sbjct 1516 ATCACTCAGGCCATGGACGATGATGACATAGAGGATGAAAGTGTTGTCCC-ACCTGCTGG 1574
Query 1629 AGAGTTGAAATCTGATGCTGATAGTATTAACACTGATGTGAATGATCCCAATGATGATTA 1688
|||||||||||| ||| ||||||||||||||||||||| |||||| | ||| |
Sbjct 1575 AGAGTTGAAATCCGATACTGATAGTATTAACACTGATGCAAATGATGACTATG--G---- 1628
Query 1689 CTATTACTTTGAGAAAGAGGTTGAAGGGACCGTCTTAAGGGC--TG-TTGAAGAGAAT-A 1744
||| |||||||| ||||||||||| ||| |||||| ||| | || ||| || | |
Sbjct 1629 CTA---CTTTGAGAGAGAGGTTGAAGAAACCTTCTTAATGGCCATTATT-AAG-GA-TGA 1682
Query 1745 TCAAAGTGGACCTTGTAACTATGGA--GATTAACGGGCTGCGG-TT-GTCATTCAACATG 1800
|| |||||| ||||| | | | ||||||| | || | || | | | |||||||
Sbjct 1683 TC----TGGACCATGTAA-T-TCGCTTGATTAACTCAC-GCCGATTTG-CGTACAACATG 1734
Query 1801 GAATCTGCAGATTGTGCTGGAGCAACATTTTTCTCGATGATAAAACTGGCACTTGATACT 1860
| |||||||||||||||||||||| ||| | ||| ||||| | ||||||| | |||||
Sbjct 1735 GCATCTGCAGATTGTGCTGGAGCAGTATTCTACTCTATGATGAGACTGGCAGTAAATACT 1794
Query 1861 CCACACAATTCTGGTAGTGAGTTGTATAAAAACGCAGCGAGTATCATTACAAAATGGAAG 1920
||||| ||||||| |||||| ||||| | ||||||| ||| ||||||||| |||||||||
Sbjct 1795 CCACATAATTCTGCTAGTGAATTGTACAGAAACGCAACGACTATCATTACTAAATGGAAG 1854
Query 1921 G-ATCTTCTTGGCTTCTACGCAAAGAAAATTGATGAACAGATAGAAGTGATCATGAAATT 1979
| | |||||||| || || |||| ||||||||||||||||||| ||||| ||||||||
Sbjct 1855 GGA-CTTCTTGGGTTTTATTTAAAGCAAATTGATGAACAGATAGAGGTGATGATGAAATT 1913
Query 1980 TGAAGAGATGTGTCAGGAATCTCACAAAGAGTTGGGCCCTTTGTTCACACAA-ATTCTAC 2038
|||||||||||| |||||||| | | |||||||| |||||||| | || ||| | |
Sbjct 1914 CGAAGAGATGTGTGAGGAATCTGA-A--GAGTTGGGGCCTTTGTTTGCT-AAGATTGTGC 1969
Query 2039 ATCTTCTATATGACAAGGACGTGTTGCAAGAAGATGCGATACTGAGATGGGAGGAAGAGA 2098
|| |||| |||||||| |||||| ||||||||||||||||| ||||||||| ||||||||
Sbjct 1970 ATTTTCTGTATGACAAAGACGTGGTGCAAGAAGATGCGATATTGAGATGGGGGGAAGAGA 2029
Query 2099 AGGCAGGCGCGGATGAAGCTGACAAAGTATATCTGAAACAATGTGATACATTCATACAGT 2158
| |||||||| || ||| |||||||||| ||||||||||||||||| ||||||||||||
Sbjct 2030 AAGCAGGCGCAGACGAATCTGACAAAGTTTATCTGAAACAATGTGAGGCATTCATACAGT 2089
Query 2159 GGCTCAAAGAAGCATCTGAGGAGgaagatgaagatgatga-agatga 2204
||||||| |||||||||||||||||||| ||||| || || || |||
Sbjct 2090 GGCTCAAGGAAGCATCTGAGGAGGAAGAAGAAGAAGAAGATAGCTGA 2136
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93283010005
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5