BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G35160.1 Length=2798 Score E Sequences producing significant alignments: (Bits) Value Ahg934126 jgi|Araly1|934126|scaffold_402114.1 2507 0.0 Ahg899566 jgi|Araly1|899566|Al_scaffold_0004_216 562 5e-159 Ahg934125 jgi|Araly1|934125|scaffold_402113.1 110 8e-23 > Ahg934126 jgi|Araly1|934126|scaffold_402114.1 Length=2449 Score = 2507 bits (1357), Expect = 0.0 Identities = 1582/1689 (94%), Gaps = 21/1689 (1%) Strand=Plus/Plus Query 921 GTTTGGATAATTACAGACAAAGGGGTTGTAATGCCTTCACCAGTGAAGCCTTCCGAGAAG 980 ||| ||||||||||| |||||||||||| ||||||| |||| ||||||||||||||||| Sbjct 762 GTTAGGATAATTACAAACAAAGGGGTTGCAATGCCTCCACCCTTGAAGCCTTCCGAGAAG 821 Query 981 AGGAATGGAGATTATGGTGAAGGATCTATGAGGAAGAATAGTGAGAGGGTTGCCCTGGAT 1040 | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 822 ACCAATGGAGATTATGGTGAAGGATCTATGAGGAAGAATAGTGAGAGGGTTGCCCCGGAT 881 Query 1041 AAAAAGAGATTAGCTAGTAAAT-TTCGGTTATCAAATGGTGGGCTTCCTAGTTGCTCAAG 1099 ||||||||||||||| || ||| |||||||||||||||||||||||||||| ||||||| Sbjct 882 AAAAAGAGATTAGCTCGT-AATCCTCGGTTATCAAATGGTGGGCTTCCTAGTGGCTCAAG 940 Query 1100 CAGTGGGGATAGTGCTCGGTATAAAGTTAAGGAAACAATGCGTCTTTTCCATGAAACTTG 1159 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 941 CAGTGGGGATAGTGCTCGGTACAAAGTTAAGGAAACTCTGCGTCTTTTCCATGAAACTTG 1000 Query 1160 TaaaaaaaTTATGCAAGAGGAAGAAGCAAGGCCTAGGAAAAGAGATGGTGGCAATTTCAA 1219 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct 1001 TAAAAAAATTATGCAGGAGGAAGAAGCAAGGCCTAGGAAAAGAGATGGTAGCAAGTTCAG 1060 Query 1220 AGTGGTTTGCGAGGCTTCGAAAATTCTCAAGAGTAAAGGGAAAAATCTTTATAGTGGTAC 1279 ||||| | |||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 1061 AGTGGATAACGAGGCTTCGAAAATTCTCAAGAGTAAAGGGAAAAATCTTAACAGTGGTAC 1120 Query 1280 TCAGATTATTGGAACTGTGCCTGGTGTTGAGGTTGGCGATGAATTTCAATATAGAATGGA 1339 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1121 TCAGATTATTGGAACCGTGCCTGGTGTTGAGGTTGGCGATGAATTTCAATATAGAATGGA 1180 Query 1340 GCTGAACCTTCTTGGTATACATAGACCAAGTCAAAGTGGTATCGACTATATGAAAGATGA 1399 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1181 GCTGAACTTTCTTGGTATACATAGACCAAGTCAAAGTGGTATCGATTATATGAAAGATGA 1240 Query 1400 CGGTGGGGAACTAGTTGCCACGAGTATTGTATCCTCGGGAGGTTATAATGACGTGCTTGA 1459 ||| | |||||||||||||||||||||||||||||| ||||||||| |||||||| |||| Sbjct 1241 CGGCGAGGAACTAGTTGCCACGAGTATTGTATCCTCTGGAGGTTATGATGACGTGGTTGA 1300 Query 1460 TAACTCTGATGTCTTGATCTACACGGGTCAAGGCGGAAATGTGGGGAAAAA--GAAA-AA 1516 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct 1301 TAACTCGGATGTCTTGATCTACACGGGTCAAGGCGGAAATGTGGGGAAAAAGGGAAAGAA 1360 Query 1517 TAATGAA-CCACCCAAAGACCAGCAGCTTGTAACGGGAAACCTTGCGTTGAAAAACAGTA 1575 ||| || |||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1361 AAAT-AATGAACCCAAAGACCAACAGCTTGTAACGGGAAACCTTGCGTTGAAAAACAGTA 1419 Query 1576 TAAACAAAAAGAACCCTGTGCGGGTCATAAGAGGCATCAAAAATACGACATTACAATCAT 1635 || |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 1420 TACACAAAAAGAACCCTGTGCGGGTCATAAGAGGCATTAAAAATACGACACTACAATCAT 1479 Query 1636 CAGTTGTTGCAAAGAATTATGTTTACGATGGATTGTATCTGGTGGAAGAGTACTGGGAAG 1695 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1480 CAGCTGTTGCAAAGAATTATGTTTACGATGGATTGTATCTGGTGGAAGAGTACTGGGAAG 1539 Query 1696 AAACCGGGTCTCACGGTAAACTCGTCTTCAAGTTCAAACTACGGCGTATTCCTGGACAAC 1755 |||| |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 1540 AAACTGGGTCTCATGGTAAGCTCGTCTTCAAGTTCAAACTGCGGCGTATTCCTGGACAAC 1599 Query 1756 CCGAGCTTCCCTGGAAAGAGGTTGCGAAATCGAAA-AAATCTGAGTTCCGGGATGGTCTT 1814 |||||||||||||||||| ||||| |||||| ||| ||||| ||||| ||||| |||||| Sbjct 1600 CCGAGCTTCCCTGGAAAGTGGTTGAGAAATC-AAAGAAATCCGAGTTGCGGGACGGTCTT 1658 Query 1815 TGCAATGTTGATATCACAGAAGGGAAAGAGACATTACCCATATGCGCTGTGAACAATTTA 1874 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 1659 TGCAATGTTGATATCTCAGAAGGGAAAGAGACATTACCCATATGCGCTGTGAACAATATA 1718 Query 1875 GACGATGAGAAACCGCCACCGTTTATCTACACGGCTAAAATGATATATCCGGATTGGTGC 1934 || ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| Sbjct 1719 GATGATGAGAAACCACCTCCGTTTATCTACACGGTTAAAATGATATATCCGGATTGGTGC 1778 Query 1935 CGGCCAATTCCTCCAAAGAGCTGCGGTTGCAC-AAACGGCTGCTCC-AAGTCAAAAAACT 1992 ||||||||||||||||||||||| |||||||| |||| |||||||| || |||||||| | Sbjct 1779 CGGCCAATTCCTCCAAAGAGCTGTGGTTGCACAAAAC-GCTGCTCCGAA-TCAAAAAAGT 1836 Query 1993 GTGCCTGCATTGTGAAAAACGGTGGAAAGATACC-T--TATTACGATGGAGCCATTGTTG 2049 |||||||| ||||||||||||||||| ||||||| | |||| ||||||||||||||| Sbjct 1837 GTGCCTGCGTTGTGAAAAACGGTGGAGAGATACCGTACAATTATGATGGAGCCATTGTT- 1895 Query 2050 A-AATTAAGCCCCTGGTCTATGAGTGTGGCCCACACTGCAAATGCCCACCTTCTTGCAAC 2108 | || ||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1896 AGTATAAAGCCCCTGGTCTATGAGTGTGGCCCACACTGCAAATGCCCACCTTCTTGCTAC 1955 Query 2109 ATGAGAGTCTCACAGCACGGGATCAAGATCAAGCTGGAGATCTTCAAAACGGAGTCAAGA 2168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1956 ATGAGAGTCTCACAGCACGGGATCAAGATCAAGCTGGAGATCTTCAAAACGGAGTCAAGA 2015 Query 2169 GGTTGGGGAGTGAGATCGCTGGAATCTATTCCTATCGGGAGCTTCATCTGTGAGTACGCA 2228 || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 2016 GGATGGGGAGTGAGATCGCTGGAATCTATTCCTATCGGAAGCTTTATCTGTGAGTACGCA 2075 Query 2229 GGAGAGCTTCTAGAGGATAAACAAGCTGAAAGCCTTACCGGGAAAGATGAGTATCTTTTT 2288 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| Sbjct 2076 GGAGATCTTCTAGAGGATAAACAAGCAGAAAGACTTACCGGGAAAGATGAGTATCTCTTT 2135 Query 2289 GATCTCGGGGACGAGGATGATCCGTTCACCATAAACGCAGCACAGAAAGGGAACATAGGG 2348 || |||||||| ||||| |||| |||||||||| ||||||||| |||||||||||||||| Sbjct 2136 GAACTCGGGGAGGAGGAGGATCAGTTCACCATAGACGCAGCACGGAAAGGGAACATAGGG 2195 Query 2349 AGGTTTATAAACCATAGCTGCTCGCCGAATCTGTACGCACAGGACGTATTGTACGACCAT 2408 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2196 AGGTTTATAAACCATAGCTGCTCACCGAATCTGTACGCACAGGACGTATTGTACGACCAT 2255 Query 2409 GAGGAAATAAGAATACCTCACATTATGTTCTTTGCACTGGACAATATACCTCCACTTCAG 2468 ||||| | |||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 2256 GAGGACACAAGAATACCTCACATTATGTTCTTTGCACTGGACCATATACCTCCACTTGAG 2315 Query 2469 GAACTCTCGTACGACTACAATTATAAGATCGATCAGGTATAC-GACTCTAATGGTAATAT 2527 |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 2316 GAACTCTCATACGACTACAATTATAAGATCGATCAGGTA-ACCGACTCTAATGGTAATAT 2374 Query 2528 CAAGAAGAAATTTTGCTATTGTGGTTCCGCTGAGTGTAGTGGTAGGCTCTACTAA-TAAG 2586 |||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 2375 CAAGAAGAAAATTTGCTACTGTGGTTCCGCTGAGTGTAGTGGTAGGCTCTACTAAGTAAG 2434 Query 2587 CTGTTGTTA 2595 ||||||||| Sbjct 2435 CTGTTGTTA 2443 Score = 730 bits (395), Expect = 0.0 Identities = 608/705 (86%), Gaps = 38/705 (5%) Strand=Plus/Plus Query 189 TTGGGCATCATGGTACATTCAGAGTCATCAATA-CTTAGTTCCTTGCGCGGTGGTGATGG 247 |||| || ||||||||||||||||||||||| | || | ||| |||||||||||| | Sbjct 12 TTGGACAACATGGTACATTCAGAGTCATCAA-AGCTCATTTCGTTGCGCGGTGGT-A--- 66 Query 248 CGGTGGTATTCCTTGTTCTAAGGATGAACTAGCAATAAATGGTAGTTACACCGATCCTAT 307 |||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||| Sbjct 67 --GTGG---TCCTTTTTCTAAGGATGAACTAGCAACAAATGGTAGTTATACCGATCCTAT 121 Query 308 GGGGCGGAGGAAGTCCAAGCGGTTTAAGGTTGCTGCGGAAAGTGAGTTTTCACCTGATTT 367 |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 122 GGGGCGGAGGAAGTCCAAGCGGTTTAAGCTTGCAGCGGAAAGTGAGTTTTCACCTGATTG 181 Query 368 TGGATCGA-TTACCAGGCAGCTCAGATCGAGAAGAATGCAGAAGGAGTTC-ACAGTTGAG 425 ||||||| || ||| || |||||||||||||| || ||||||||| || | | ||||| Sbjct 182 TGGATCGGGTT-CCATGCGGCTCAGATCGAGAACTATACAGAAGGAGCTCCAAA-TTGAG 239 Query 426 ACTTACGAGACCAGGAATGTTTCTGATGTTTGTGTTCTCTCTTCTCAAGCTGATGTTGAG 485 |||| ||||| |||||||| |||||| ||| | | | | | | ||| Sbjct 240 ACTTGCGAGAACAGGAATGCTTCTGAAGTT-G--------------A-G--G-T-T-GAG 278 Query 486 TTGATTCCTGGAGAAATTGTTGCAGAAAGAGATAGCTTTAAGTCGGTTGATTGTAATGAC 545 |||||||||||||||| || ||||| ||||| ||||||| || ||||||||||||||| Sbjct 279 TTGATTCCTGGAGAAAAAGTGGCAGATCGAGATGGCTTTAAATCCGTTGATTGTAATGAC 338 Query 546 ATGTCGGTTGG-GTTAACCGAAGGAGCTGAATCTCTTGGAGTTAACATGCAAGAACCTAT 604 ||||||| ||| || ||||||||||||| |||||||| ||||||| ||||||||||| || Sbjct 339 ATGTCGGCTGGAGT-AACCGAAGGAGCTAAATCTCTTCGAGTTAATATGCAAGAACCAAT 397 Query 605 GAAAGATAGGAATATGCCAGAGAACACAAGTGAGCAAAATATGGTGGAGGTCCATCCTCC 664 | ||| ||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||| Sbjct 398 GGAAGGTAGGAATCTGCCAGAGAATACAAGTGAGCAAAATTTGGTGGAGGTCCATCTTCC 457 Query 665 AAGCATAAGCCTGCCAGAGGAAGATATGATGGGGTCTGTTTGCAGGAAAAGCATCACTGG 724 |||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| || Sbjct 458 AAGCATAAGCCTGCCAGAAGAAGATGTGATGGGGTCTGTTTGCAGGAAAAGTATCACCGG 517 Query 725 AACAAAGGAGCTTCACGGAAGAACGATCTCTGTTGGGAGAGACTTATCTCCAAATATGGG 784 ||||||||||||| |||||||||||| ||||| | |||||||||||||||||||||||| Sbjct 518 GACAAAGGAGCTTCGCGGAAGAACGATTTCTGTAGTGAGAGACTTATCTCCAAATATGGG 577 Query 785 GAGCAAGTTTTCAAAGAATGGAAAGACCGCTAAACGTTCTATATCGGTGGAAGAGGAAAA 844 || |||||||||||||| |||||||||||||||| ||||||||||| |||||||||| || Sbjct 578 GAACAAGTTTTCAAAGAGTGGAAAGACCGCTAAAGGTTCTATATCGATGGAAGAGGATAA 637 Query 845 CTTGGTTCTGGAGAAGTCAGATTCTGGAGACCATTTGGGTCCATC 889 |||||||||||| ||||||||||||||||| |||||||||| ||| Sbjct 638 CTTGGTTCTGGAAAAGTCAGATTCTGGAGATCATTTGGGTCAATC 682 > Ahg899566 jgi|Araly1|899566|Al_scaffold_0004_216 Length=2427 Score = 562 bits (304), Expect = 5e-159 Identities = 953/1253 (76%), Gaps = 97/1253 (8%) Strand=Plus/Plus Query 1095 TCAAGCAGTGG-G--GATAGTGCTCGGTATAAAGTTAAGGAAACAATGCGTCTTTTCCAT 1151 ||||||||||| | |||||| |||| | |||||||||||||| |||||||||||||| Sbjct 844 TCAAGCAGTGGTGATGATAGTATTCGGAACAAAGTTAAGGAAACTCTGCGTCTTTTCCAT 903 Query 1152 GAAAC-T-TGTaaaaaaaTTATGCAAGAGGAAGAAGCAAGGCCT-AGGA--AAA-GAG-- 1203 | | | || |||| ||| |||| ||||| ||||||| |||| |||| ||| ||| Sbjct 904 G--GCGTGTGCAAAAGGATTTTGCAGGAGGATGAAGCAAAGCCTGAGGACCAAAGGAGAA 961 Query 1204 ATGGTGGCAA--T-TTCA-AAGT-GGTTTGCGAGGCTTCGAAAATTCTCAAGAGTAAAGG 1258 | ||| || | || | || | | ||| || |||||||| |||||||| || || || Sbjct 962 AAGGT--AAAGGTCTT-AGAA-TAGATTT-TGACGCTTCGAAGATTCTCAAAAGGAATGG 1016 Query 1259 GAAAAATCTTTATAGTGGTACTCAGATTATTGGAAC-TGTGCCTGGTGTTGAGGTTGGCG 1317 |||| |||| || |||||| |||||| |||| || ||| ||||| ||||||||||| | Sbjct 1017 GAAATATCTCAATTCTGGTACACAGATT-TTGGGACATGTACCTGGAGTTGAGGTTGGTG 1075 Query 1318 ATGAATTTCAATATAGAATGGAGCTGAACCTTCTTGGTATACATAGACCAAGTCAAAG-T 1376 |||| || | |||||| |||||||||||| |||||||| |||| |||||||| | ||| Sbjct 1076 ATGAGTTCCTATATAGGATGGAGCTGAACATTCTTGGTGTACACAGACCAAG-CCAAGCC 1134 Query 1377 GGTATCGACTATATGAAAGATGACGGT-GGGGAACTAGTTGCCACGAGTATTGTATCCTC 1435 |||||||| |||||| || || | ||| ||| | ||||||| || ||||||||| |||| Sbjct 1135 GGTATCGATTATATG-AA-AT-ATGGTAAGGGCA-TAGTTGCGACAAGTATTGTAGCCTC 1190 Query 1436 GGGAGGTTATAATGA-CGTGCTTGATAACTCTGATGTCTTGATCTACACGGGTCAAGGCG 1494 ||||| ||| | || | | || |||||||| |||||||||| |||||| |||||||||| Sbjct 1191 TGGAGGGTATGACGACCAT-CTGGATAACTCGGATGTCTTGACCTACACTGGTCAAGGCG 1249 Query 1495 GAAATGTG--G---GGAAA-AAGAA----AAATAA-TGAACCA-CCCAAAGACCAGCAGC 1542 |||||||| | | ||| ||||| || || |||| | ||| ||||||| ||| Sbjct 1250 GAAATGTGATGCAAGTAAAGAAGAAGGGCAAGGAACTGAAAGAGCCCGAAGACCAAAAGC 1309 Query 1543 TTGTAACGGGAAACCTTGCGTTGA-AAAACAG-TATAAACAAAAAGAAC-CCTGTGCGGG 1599 || || | |||||||| ||||| | || ||| | |||| || ||| || |||||||| | Sbjct 1310 TTATATCAGGAAACCTCGCGTT-AGCAACCAGCT-TAAAGAAGAAG-ACACCTGTGCGTG 1366 Query 1600 TCATAAGAGGC-ATCAAAAATACGACATTACAATCATCAGT-TGTTGCAAAGAATTATGT 1657 |||| |||||| | || || | | || ||| || ||||| | || || | |||||||| Sbjct 1367 TCATTAGAGGCAAACATAAGT-CAACTTTAAAAACATCA-TCTGGTG--GA-AATTATGT 1421 Query 1658 TTACGATGGATTGTATCTGGTGGAAGAGTACTGGGAAGAAACCGGGTCTCAC-GG-TAAA 1715 ||||| || |||||||| ||| |||| || ||| ||||| ||| |||||| || | | Sbjct 1422 CTACGACGGTTTGTATCTTGTGAAAGATTATTGGCAAGAAGTCGGATCTCACGGGATGTA 1481 Query 1716 CTCGTCTTCAAG-TTCAAAC-TACGGCGTATTCCTGGACAACCCGAGCTTCCCTGGAAAG 1773 | ||||||||| ||| ||| || |||| || ||||||||| | || ||| | |||| || Sbjct 1482 -T-GTCTTCAAGTTTC-AACTTA-GGCGCATACCTGGACAATCTGAACTTTCATGGATAG 1537 Query 1774 AGGTTG-CGAAATCGAAAAAATCTGAGTTCCGGGATGGTCTTTGCAATG-TTGATATCAC 1831 ||| || |||||| || || | | |||||| ||| | ||||| | |||| ||| | Sbjct 1538 AGG-TGAAGAAATC---TAAGTCAAAATACCGGGAAGGTATATGCAA-GCTTGACATCTC 1592 Query 1832 AGAAGGGAAAGAGACAT-T-ACCCA-TATGCGCTGTGAA-CAATTTAGACGATGAGAAAC 1887 ||||||||||||| | | | ||||| || |||||||||| || |||| || ||||||| Sbjct 1593 AGAAGGGAAAGAG-C-TGTCACCCATTA-GCGCTGTGAATGAA-ATAGATGACGAGAAAC 1648 Query 1888 CGCCACCGTTTATCTACACGGCTAAAATGATATATCCGGATTGGTGCCGGCCAATTCCTC 1947 |||| ||| | |||||| | ||||||||| || || ||||||||| | ||| |||||| Sbjct 1649 CGCCTTTGTTCACCTACACAGTTAAAATGATTTACCCAGATTGGTGCAGACCAGTTCCTC 1708 Query 1948 CAAAGAGC-TGCGGTTGCA-CAAACGGCTGCTC-CAAGTCAAAAAACTGTGCCTGCATTG 2004 ||||| | |||||||||| || || ||||| | ||| | | || || || || | | Sbjct 1709 CAAAG-TCATGCGGTTGCACCACAC-GCTGCACAGAAG-CCAGGAAGTGCGCGTGTGTGG 1765 Query 2005 TGAAAAACGGTGGAAAGATACC-T--TATTACGATGGAGCCATTGTTGAAATTAAGCCCC 2061 ||||||||| ||| ||||||| | | ||||||||||||||||||| ||||| Sbjct 1766 TGAAAAACGACGGAGAGATACCGTACAACTACGATGGAGCCATTGTTGGGGCTAAGCTTT 1825 Query 2062 TGGTCTATGAGTGTGGCCCACACTGCAAATGCCCACCTTCTTGCAACATGAGAGTCTCAC 2121 | ||||||| |||||||| | |||||||||||| || |||| || | |||||| ||| Sbjct 1826 TTATCTATGAATGTGGCCCGCTCTGCAAATGCCCTTCTAGTTGCTACCTAAGAGTCACAC 1885 Query 2122 AGCACGGGATCAAGATCA-AGCTGGAGATCTTCAAAACGGAGTCAAGAGGTTGGGGAGTG 2180 |||||||||||||| | | ||| |||||||||||||| |||||||||||||||||||| Sbjct 1886 AGCACGGGATCAAG-TTACCGCTTGAGATCTTCAAAACCAAGTCAAGAGGTTGGGGAGTG 1944 Query 2181 AGATCGCTGGAATCTATTCCTATCGGGAGCTTCATCTGTGAGTACGCAGGAGAGCTTCT- 2239 |||||||| |||| || ||||| || || ||||| || || |||| || || || || Sbjct 1945 AGATCGCTTAAATCGATCCCTATTGGTAGTTTCATATGCGAATACGTTGGTGAACT-CTT 2003 Query 2240 AGAGGATAAAC-AAGCTGAAAGCCTTACCGGGAAAGATGAGTATCTTTTTGAT 2291 ||| |||| | |||| ||||| | |||||| || |||||||| |||||| Sbjct 2004 AGATGATAG-CGAAGCAGAAAGAAGAATCGGGAACGACGAGTATCTCTTTGAT 2055 > Ahg934125 jgi|Araly1|934125|scaffold_402113.1 Length=203 Score = 110 bits (59), Expect = 8e-23 Identities = 76/83 (92%), Gaps = 5/83 (6%) Strand=Plus/Minus Query 96 CCCAATTTGAGTAGGCGACTCACA--TATCTCCCGCTCCGGCCAATCGACTCGTC---AT 150 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 201 CCCAATTTGAGTAGGCGACTCACACATATCTCCCGCTCCGGCCAATCGACTCGTCGTCAT 142 Query 151 CTCCGCCATTATCACTACTCCTT 173 |||||||||||||| || ||||| Sbjct 141 CTCCGCCATTATCAGTATTCCTT 119 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 105586159140 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5