BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G35160.1
Length=2798
Score E
Sequences producing significant alignments: (Bits) Value
Ahg934126 jgi|Araly1|934126|scaffold_402114.1 2507 0.0
Ahg899566 jgi|Araly1|899566|Al_scaffold_0004_216 562 5e-159
Ahg934125 jgi|Araly1|934125|scaffold_402113.1 110 8e-23
> Ahg934126 jgi|Araly1|934126|scaffold_402114.1
Length=2449
Score = 2507 bits (1357), Expect = 0.0
Identities = 1582/1689 (94%), Gaps = 21/1689 (1%)
Strand=Plus/Plus
Query 921 GTTTGGATAATTACAGACAAAGGGGTTGTAATGCCTTCACCAGTGAAGCCTTCCGAGAAG 980
||| ||||||||||| |||||||||||| ||||||| |||| |||||||||||||||||
Sbjct 762 GTTAGGATAATTACAAACAAAGGGGTTGCAATGCCTCCACCCTTGAAGCCTTCCGAGAAG 821
Query 981 AGGAATGGAGATTATGGTGAAGGATCTATGAGGAAGAATAGTGAGAGGGTTGCCCTGGAT 1040
| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 822 ACCAATGGAGATTATGGTGAAGGATCTATGAGGAAGAATAGTGAGAGGGTTGCCCCGGAT 881
Query 1041 AAAAAGAGATTAGCTAGTAAAT-TTCGGTTATCAAATGGTGGGCTTCCTAGTTGCTCAAG 1099
||||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||
Sbjct 882 AAAAAGAGATTAGCTCGT-AATCCTCGGTTATCAAATGGTGGGCTTCCTAGTGGCTCAAG 940
Query 1100 CAGTGGGGATAGTGCTCGGTATAAAGTTAAGGAAACAATGCGTCTTTTCCATGAAACTTG 1159
||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 941 CAGTGGGGATAGTGCTCGGTACAAAGTTAAGGAAACTCTGCGTCTTTTCCATGAAACTTG 1000
Query 1160 TaaaaaaaTTATGCAAGAGGAAGAAGCAAGGCCTAGGAAAAGAGATGGTGGCAATTTCAA 1219
||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 1001 TAAAAAAATTATGCAGGAGGAAGAAGCAAGGCCTAGGAAAAGAGATGGTAGCAAGTTCAG 1060
Query 1220 AGTGGTTTGCGAGGCTTCGAAAATTCTCAAGAGTAAAGGGAAAAATCTTTATAGTGGTAC 1279
||||| | |||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1061 AGTGGATAACGAGGCTTCGAAAATTCTCAAGAGTAAAGGGAAAAATCTTAACAGTGGTAC 1120
Query 1280 TCAGATTATTGGAACTGTGCCTGGTGTTGAGGTTGGCGATGAATTTCAATATAGAATGGA 1339
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 TCAGATTATTGGAACCGTGCCTGGTGTTGAGGTTGGCGATGAATTTCAATATAGAATGGA 1180
Query 1340 GCTGAACCTTCTTGGTATACATAGACCAAGTCAAAGTGGTATCGACTATATGAAAGATGA 1399
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1181 GCTGAACTTTCTTGGTATACATAGACCAAGTCAAAGTGGTATCGATTATATGAAAGATGA 1240
Query 1400 CGGTGGGGAACTAGTTGCCACGAGTATTGTATCCTCGGGAGGTTATAATGACGTGCTTGA 1459
||| | |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||
Sbjct 1241 CGGCGAGGAACTAGTTGCCACGAGTATTGTATCCTCTGGAGGTTATGATGACGTGGTTGA 1300
Query 1460 TAACTCTGATGTCTTGATCTACACGGGTCAAGGCGGAAATGTGGGGAAAAA--GAAA-AA 1516
|||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 1301 TAACTCGGATGTCTTGATCTACACGGGTCAAGGCGGAAATGTGGGGAAAAAGGGAAAGAA 1360
Query 1517 TAATGAA-CCACCCAAAGACCAGCAGCTTGTAACGGGAAACCTTGCGTTGAAAAACAGTA 1575
||| || |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1361 AAAT-AATGAACCCAAAGACCAACAGCTTGTAACGGGAAACCTTGCGTTGAAAAACAGTA 1419
Query 1576 TAAACAAAAAGAACCCTGTGCGGGTCATAAGAGGCATCAAAAATACGACATTACAATCAT 1635
|| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 1420 TACACAAAAAGAACCCTGTGCGGGTCATAAGAGGCATTAAAAATACGACACTACAATCAT 1479
Query 1636 CAGTTGTTGCAAAGAATTATGTTTACGATGGATTGTATCTGGTGGAAGAGTACTGGGAAG 1695
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 CAGCTGTTGCAAAGAATTATGTTTACGATGGATTGTATCTGGTGGAAGAGTACTGGGAAG 1539
Query 1696 AAACCGGGTCTCACGGTAAACTCGTCTTCAAGTTCAAACTACGGCGTATTCCTGGACAAC 1755
|||| |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1540 AAACTGGGTCTCATGGTAAGCTCGTCTTCAAGTTCAAACTGCGGCGTATTCCTGGACAAC 1599
Query 1756 CCGAGCTTCCCTGGAAAGAGGTTGCGAAATCGAAA-AAATCTGAGTTCCGGGATGGTCTT 1814
|||||||||||||||||| ||||| |||||| ||| ||||| ||||| ||||| ||||||
Sbjct 1600 CCGAGCTTCCCTGGAAAGTGGTTGAGAAATC-AAAGAAATCCGAGTTGCGGGACGGTCTT 1658
Query 1815 TGCAATGTTGATATCACAGAAGGGAAAGAGACATTACCCATATGCGCTGTGAACAATTTA 1874
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1659 TGCAATGTTGATATCTCAGAAGGGAAAGAGACATTACCCATATGCGCTGTGAACAATATA 1718
Query 1875 GACGATGAGAAACCGCCACCGTTTATCTACACGGCTAAAATGATATATCCGGATTGGTGC 1934
|| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||
Sbjct 1719 GATGATGAGAAACCACCTCCGTTTATCTACACGGTTAAAATGATATATCCGGATTGGTGC 1778
Query 1935 CGGCCAATTCCTCCAAAGAGCTGCGGTTGCAC-AAACGGCTGCTCC-AAGTCAAAAAACT 1992
||||||||||||||||||||||| |||||||| |||| |||||||| || |||||||| |
Sbjct 1779 CGGCCAATTCCTCCAAAGAGCTGTGGTTGCACAAAAC-GCTGCTCCGAA-TCAAAAAAGT 1836
Query 1993 GTGCCTGCATTGTGAAAAACGGTGGAAAGATACC-T--TATTACGATGGAGCCATTGTTG 2049
|||||||| ||||||||||||||||| ||||||| | |||| |||||||||||||||
Sbjct 1837 GTGCCTGCGTTGTGAAAAACGGTGGAGAGATACCGTACAATTATGATGGAGCCATTGTT- 1895
Query 2050 A-AATTAAGCCCCTGGTCTATGAGTGTGGCCCACACTGCAAATGCCCACCTTCTTGCAAC 2108
| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1896 AGTATAAAGCCCCTGGTCTATGAGTGTGGCCCACACTGCAAATGCCCACCTTCTTGCTAC 1955
Query 2109 ATGAGAGTCTCACAGCACGGGATCAAGATCAAGCTGGAGATCTTCAAAACGGAGTCAAGA 2168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1956 ATGAGAGTCTCACAGCACGGGATCAAGATCAAGCTGGAGATCTTCAAAACGGAGTCAAGA 2015
Query 2169 GGTTGGGGAGTGAGATCGCTGGAATCTATTCCTATCGGGAGCTTCATCTGTGAGTACGCA 2228
|| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 2016 GGATGGGGAGTGAGATCGCTGGAATCTATTCCTATCGGAAGCTTTATCTGTGAGTACGCA 2075
Query 2229 GGAGAGCTTCTAGAGGATAAACAAGCTGAAAGCCTTACCGGGAAAGATGAGTATCTTTTT 2288
||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct 2076 GGAGATCTTCTAGAGGATAAACAAGCAGAAAGACTTACCGGGAAAGATGAGTATCTCTTT 2135
Query 2289 GATCTCGGGGACGAGGATGATCCGTTCACCATAAACGCAGCACAGAAAGGGAACATAGGG 2348
|| |||||||| ||||| |||| |||||||||| ||||||||| ||||||||||||||||
Sbjct 2136 GAACTCGGGGAGGAGGAGGATCAGTTCACCATAGACGCAGCACGGAAAGGGAACATAGGG 2195
Query 2349 AGGTTTATAAACCATAGCTGCTCGCCGAATCTGTACGCACAGGACGTATTGTACGACCAT 2408
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2196 AGGTTTATAAACCATAGCTGCTCACCGAATCTGTACGCACAGGACGTATTGTACGACCAT 2255
Query 2409 GAGGAAATAAGAATACCTCACATTATGTTCTTTGCACTGGACAATATACCTCCACTTCAG 2468
||||| | |||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2256 GAGGACACAAGAATACCTCACATTATGTTCTTTGCACTGGACCATATACCTCCACTTGAG 2315
Query 2469 GAACTCTCGTACGACTACAATTATAAGATCGATCAGGTATAC-GACTCTAATGGTAATAT 2527
|||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 2316 GAACTCTCATACGACTACAATTATAAGATCGATCAGGTA-ACCGACTCTAATGGTAATAT 2374
Query 2528 CAAGAAGAAATTTTGCTATTGTGGTTCCGCTGAGTGTAGTGGTAGGCTCTACTAA-TAAG 2586
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 2375 CAAGAAGAAAATTTGCTACTGTGGTTCCGCTGAGTGTAGTGGTAGGCTCTACTAAGTAAG 2434
Query 2587 CTGTTGTTA 2595
|||||||||
Sbjct 2435 CTGTTGTTA 2443
Score = 730 bits (395), Expect = 0.0
Identities = 608/705 (86%), Gaps = 38/705 (5%)
Strand=Plus/Plus
Query 189 TTGGGCATCATGGTACATTCAGAGTCATCAATA-CTTAGTTCCTTGCGCGGTGGTGATGG 247
|||| || ||||||||||||||||||||||| | || | ||| |||||||||||| |
Sbjct 12 TTGGACAACATGGTACATTCAGAGTCATCAA-AGCTCATTTCGTTGCGCGGTGGT-A--- 66
Query 248 CGGTGGTATTCCTTGTTCTAAGGATGAACTAGCAATAAATGGTAGTTACACCGATCCTAT 307
|||| ||||| |||||||||||||||||||| |||||||||||| |||||||||||
Sbjct 67 --GTGG---TCCTTTTTCTAAGGATGAACTAGCAACAAATGGTAGTTATACCGATCCTAT 121
Query 308 GGGGCGGAGGAAGTCCAAGCGGTTTAAGGTTGCTGCGGAAAGTGAGTTTTCACCTGATTT 367
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 122 GGGGCGGAGGAAGTCCAAGCGGTTTAAGCTTGCAGCGGAAAGTGAGTTTTCACCTGATTG 181
Query 368 TGGATCGA-TTACCAGGCAGCTCAGATCGAGAAGAATGCAGAAGGAGTTC-ACAGTTGAG 425
||||||| || ||| || |||||||||||||| || ||||||||| || | | |||||
Sbjct 182 TGGATCGGGTT-CCATGCGGCTCAGATCGAGAACTATACAGAAGGAGCTCCAAA-TTGAG 239
Query 426 ACTTACGAGACCAGGAATGTTTCTGATGTTTGTGTTCTCTCTTCTCAAGCTGATGTTGAG 485
|||| ||||| |||||||| |||||| ||| | | | | | | |||
Sbjct 240 ACTTGCGAGAACAGGAATGCTTCTGAAGTT-G--------------A-G--G-T-T-GAG 278
Query 486 TTGATTCCTGGAGAAATTGTTGCAGAAAGAGATAGCTTTAAGTCGGTTGATTGTAATGAC 545
|||||||||||||||| || ||||| ||||| ||||||| || |||||||||||||||
Sbjct 279 TTGATTCCTGGAGAAAAAGTGGCAGATCGAGATGGCTTTAAATCCGTTGATTGTAATGAC 338
Query 546 ATGTCGGTTGG-GTTAACCGAAGGAGCTGAATCTCTTGGAGTTAACATGCAAGAACCTAT 604
||||||| ||| || ||||||||||||| |||||||| ||||||| ||||||||||| ||
Sbjct 339 ATGTCGGCTGGAGT-AACCGAAGGAGCTAAATCTCTTCGAGTTAATATGCAAGAACCAAT 397
Query 605 GAAAGATAGGAATATGCCAGAGAACACAAGTGAGCAAAATATGGTGGAGGTCCATCCTCC 664
| ||| ||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||
Sbjct 398 GGAAGGTAGGAATCTGCCAGAGAATACAAGTGAGCAAAATTTGGTGGAGGTCCATCTTCC 457
Query 665 AAGCATAAGCCTGCCAGAGGAAGATATGATGGGGTCTGTTTGCAGGAAAAGCATCACTGG 724
|||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||
Sbjct 458 AAGCATAAGCCTGCCAGAAGAAGATGTGATGGGGTCTGTTTGCAGGAAAAGTATCACCGG 517
Query 725 AACAAAGGAGCTTCACGGAAGAACGATCTCTGTTGGGAGAGACTTATCTCCAAATATGGG 784
||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||||||
Sbjct 518 GACAAAGGAGCTTCGCGGAAGAACGATTTCTGTAGTGAGAGACTTATCTCCAAATATGGG 577
Query 785 GAGCAAGTTTTCAAAGAATGGAAAGACCGCTAAACGTTCTATATCGGTGGAAGAGGAAAA 844
|| |||||||||||||| |||||||||||||||| ||||||||||| |||||||||| ||
Sbjct 578 GAACAAGTTTTCAAAGAGTGGAAAGACCGCTAAAGGTTCTATATCGATGGAAGAGGATAA 637
Query 845 CTTGGTTCTGGAGAAGTCAGATTCTGGAGACCATTTGGGTCCATC 889
|||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct 638 CTTGGTTCTGGAAAAGTCAGATTCTGGAGATCATTTGGGTCAATC 682
> Ahg899566 jgi|Araly1|899566|Al_scaffold_0004_216
Length=2427
Score = 562 bits (304), Expect = 5e-159
Identities = 953/1253 (76%), Gaps = 97/1253 (8%)
Strand=Plus/Plus
Query 1095 TCAAGCAGTGG-G--GATAGTGCTCGGTATAAAGTTAAGGAAACAATGCGTCTTTTCCAT 1151
||||||||||| | |||||| |||| | |||||||||||||| ||||||||||||||
Sbjct 844 TCAAGCAGTGGTGATGATAGTATTCGGAACAAAGTTAAGGAAACTCTGCGTCTTTTCCAT 903
Query 1152 GAAAC-T-TGTaaaaaaaTTATGCAAGAGGAAGAAGCAAGGCCT-AGGA--AAA-GAG-- 1203
| | | || |||| ||| |||| ||||| ||||||| |||| |||| ||| |||
Sbjct 904 G--GCGTGTGCAAAAGGATTTTGCAGGAGGATGAAGCAAAGCCTGAGGACCAAAGGAGAA 961
Query 1204 ATGGTGGCAA--T-TTCA-AAGT-GGTTTGCGAGGCTTCGAAAATTCTCAAGAGTAAAGG 1258
| ||| || | || | || | | ||| || |||||||| |||||||| || || ||
Sbjct 962 AAGGT--AAAGGTCTT-AGAA-TAGATTT-TGACGCTTCGAAGATTCTCAAAAGGAATGG 1016
Query 1259 GAAAAATCTTTATAGTGGTACTCAGATTATTGGAAC-TGTGCCTGGTGTTGAGGTTGGCG 1317
|||| |||| || |||||| |||||| |||| || ||| ||||| ||||||||||| |
Sbjct 1017 GAAATATCTCAATTCTGGTACACAGATT-TTGGGACATGTACCTGGAGTTGAGGTTGGTG 1075
Query 1318 ATGAATTTCAATATAGAATGGAGCTGAACCTTCTTGGTATACATAGACCAAGTCAAAG-T 1376
|||| || | |||||| |||||||||||| |||||||| |||| |||||||| | |||
Sbjct 1076 ATGAGTTCCTATATAGGATGGAGCTGAACATTCTTGGTGTACACAGACCAAG-CCAAGCC 1134
Query 1377 GGTATCGACTATATGAAAGATGACGGT-GGGGAACTAGTTGCCACGAGTATTGTATCCTC 1435
|||||||| |||||| || || | ||| ||| | ||||||| || ||||||||| ||||
Sbjct 1135 GGTATCGATTATATG-AA-AT-ATGGTAAGGGCA-TAGTTGCGACAAGTATTGTAGCCTC 1190
Query 1436 GGGAGGTTATAATGA-CGTGCTTGATAACTCTGATGTCTTGATCTACACGGGTCAAGGCG 1494
||||| ||| | || | | || |||||||| |||||||||| |||||| ||||||||||
Sbjct 1191 TGGAGGGTATGACGACCAT-CTGGATAACTCGGATGTCTTGACCTACACTGGTCAAGGCG 1249
Query 1495 GAAATGTG--G---GGAAA-AAGAA----AAATAA-TGAACCA-CCCAAAGACCAGCAGC 1542
|||||||| | | ||| ||||| || || |||| | ||| ||||||| |||
Sbjct 1250 GAAATGTGATGCAAGTAAAGAAGAAGGGCAAGGAACTGAAAGAGCCCGAAGACCAAAAGC 1309
Query 1543 TTGTAACGGGAAACCTTGCGTTGA-AAAACAG-TATAAACAAAAAGAAC-CCTGTGCGGG 1599
|| || | |||||||| ||||| | || ||| | |||| || ||| || |||||||| |
Sbjct 1310 TTATATCAGGAAACCTCGCGTT-AGCAACCAGCT-TAAAGAAGAAG-ACACCTGTGCGTG 1366
Query 1600 TCATAAGAGGC-ATCAAAAATACGACATTACAATCATCAGT-TGTTGCAAAGAATTATGT 1657
|||| |||||| | || || | | || ||| || ||||| | || || | ||||||||
Sbjct 1367 TCATTAGAGGCAAACATAAGT-CAACTTTAAAAACATCA-TCTGGTG--GA-AATTATGT 1421
Query 1658 TTACGATGGATTGTATCTGGTGGAAGAGTACTGGGAAGAAACCGGGTCTCAC-GG-TAAA 1715
||||| || |||||||| ||| |||| || ||| ||||| ||| |||||| || | |
Sbjct 1422 CTACGACGGTTTGTATCTTGTGAAAGATTATTGGCAAGAAGTCGGATCTCACGGGATGTA 1481
Query 1716 CTCGTCTTCAAG-TTCAAAC-TACGGCGTATTCCTGGACAACCCGAGCTTCCCTGGAAAG 1773
| ||||||||| ||| ||| || |||| || ||||||||| | || ||| | |||| ||
Sbjct 1482 -T-GTCTTCAAGTTTC-AACTTA-GGCGCATACCTGGACAATCTGAACTTTCATGGATAG 1537
Query 1774 AGGTTG-CGAAATCGAAAAAATCTGAGTTCCGGGATGGTCTTTGCAATG-TTGATATCAC 1831
||| || |||||| || || | | |||||| ||| | ||||| | |||| ||| |
Sbjct 1538 AGG-TGAAGAAATC---TAAGTCAAAATACCGGGAAGGTATATGCAA-GCTTGACATCTC 1592
Query 1832 AGAAGGGAAAGAGACAT-T-ACCCA-TATGCGCTGTGAA-CAATTTAGACGATGAGAAAC 1887
||||||||||||| | | | ||||| || |||||||||| || |||| || |||||||
Sbjct 1593 AGAAGGGAAAGAG-C-TGTCACCCATTA-GCGCTGTGAATGAA-ATAGATGACGAGAAAC 1648
Query 1888 CGCCACCGTTTATCTACACGGCTAAAATGATATATCCGGATTGGTGCCGGCCAATTCCTC 1947
|||| ||| | |||||| | ||||||||| || || ||||||||| | ||| ||||||
Sbjct 1649 CGCCTTTGTTCACCTACACAGTTAAAATGATTTACCCAGATTGGTGCAGACCAGTTCCTC 1708
Query 1948 CAAAGAGC-TGCGGTTGCA-CAAACGGCTGCTC-CAAGTCAAAAAACTGTGCCTGCATTG 2004
||||| | |||||||||| || || ||||| | ||| | | || || || || | |
Sbjct 1709 CAAAG-TCATGCGGTTGCACCACAC-GCTGCACAGAAG-CCAGGAAGTGCGCGTGTGTGG 1765
Query 2005 TGAAAAACGGTGGAAAGATACC-T--TATTACGATGGAGCCATTGTTGAAATTAAGCCCC 2061
||||||||| ||| ||||||| | | ||||||||||||||||||| |||||
Sbjct 1766 TGAAAAACGACGGAGAGATACCGTACAACTACGATGGAGCCATTGTTGGGGCTAAGCTTT 1825
Query 2062 TGGTCTATGAGTGTGGCCCACACTGCAAATGCCCACCTTCTTGCAACATGAGAGTCTCAC 2121
| ||||||| |||||||| | |||||||||||| || |||| || | |||||| |||
Sbjct 1826 TTATCTATGAATGTGGCCCGCTCTGCAAATGCCCTTCTAGTTGCTACCTAAGAGTCACAC 1885
Query 2122 AGCACGGGATCAAGATCA-AGCTGGAGATCTTCAAAACGGAGTCAAGAGGTTGGGGAGTG 2180
|||||||||||||| | | ||| |||||||||||||| ||||||||||||||||||||
Sbjct 1886 AGCACGGGATCAAG-TTACCGCTTGAGATCTTCAAAACCAAGTCAAGAGGTTGGGGAGTG 1944
Query 2181 AGATCGCTGGAATCTATTCCTATCGGGAGCTTCATCTGTGAGTACGCAGGAGAGCTTCT- 2239
|||||||| |||| || ||||| || || ||||| || || |||| || || || ||
Sbjct 1945 AGATCGCTTAAATCGATCCCTATTGGTAGTTTCATATGCGAATACGTTGGTGAACT-CTT 2003
Query 2240 AGAGGATAAAC-AAGCTGAAAGCCTTACCGGGAAAGATGAGTATCTTTTTGAT 2291
||| |||| | |||| ||||| | |||||| || |||||||| ||||||
Sbjct 2004 AGATGATAG-CGAAGCAGAAAGAAGAATCGGGAACGACGAGTATCTCTTTGAT 2055
> Ahg934125 jgi|Araly1|934125|scaffold_402113.1
Length=203
Score = 110 bits (59), Expect = 8e-23
Identities = 76/83 (92%), Gaps = 5/83 (6%)
Strand=Plus/Minus
Query 96 CCCAATTTGAGTAGGCGACTCACA--TATCTCCCGCTCCGGCCAATCGACTCGTC---AT 150
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 201 CCCAATTTGAGTAGGCGACTCACACATATCTCCCGCTCCGGCCAATCGACTCGTCGTCAT 142
Query 151 CTCCGCCATTATCACTACTCCTT 173
|||||||||||||| || |||||
Sbjct 141 CTCCGCCATTATCAGTATTCCTT 119
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105586159140
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5