BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G36370.1 Length=2965 Score E Sequences producing significant alignments: (Bits) Value Ahg901488 jgi|Araly1|901488|Al_scaffold_0004_2138 4272 0.0 Ahg901667 jgi|Araly1|901667|Al_scaffold_0004_2317 296 6e-79 Ahg901652 jgi|Araly1|901652|Al_scaffold_0004_2302 226 8e-58 Ahg934449 jgi|Araly1|934449|scaffold_402437.1 224 3e-57 Ahg934429 jgi|Araly1|934429|scaffold_402417.1 224 3e-57 Ahg934455 jgi|Araly1|934455|scaffold_402443.1 187 4e-46 > Ahg901488 jgi|Araly1|901488|Al_scaffold_0004_2138 Length=2826 Score = 4272 bits (2313), Expect = 0.0 Identities = 2641/2802 (94%), Gaps = 12/2802 (0%) Strand=Plus/Plus Query 1 TCGTGATTCTCGTCGTGAAGAACCCATGTTATCAACAAGACGACGCATCTTCTTCGATTC 60 |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct 29 TCGTGACTCTCGTCGTGAAGAATCCATGTTATCAACAAGACGACGCATCTTCTTCGAGTC 88 Query 61 AAGAGATTTCGATCTCAGCTTCTGAAATTGCTTCCTGGGATATGTCAGAGATACTCTCTT 120 |||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 89 AAGATATTTCGATCTCAGCTTCTGAAATTGCTTCCTGGAATTTGTCAGAGATACTCTCTT 148 Query 121 ACGGAAGTGTAAAAGTTCGAGCTCATCGAACTAGGCTTATTC-AGGAATCCTCGTATTTC 179 ||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 149 ACGGAAGAGTAAAAGTTCGAGCTCATCGAACTAGGCTTA-TCGAGGAATCCTCGTATTTC 207 Query 180 CATGGCCTTCTAAGCGGAAGCTTCAGTGAATCAGGCCTTGATCATATCTCTGTTGAATGG 239 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 208 CATGGTCTTTTAAGCGGAAGCTTCAGTGAATCAGGCCTTGATCATATCTCTGTTGAATGG 267 Query 240 AA-CCTAGAGAGTTTCTTGAATCTTCTCATGTGTTTGTATGGTTACGATATAGAGATTAC 298 || || ||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 268 AATCC-AGAGACTTTCTTGAATCTTCTCATGTTTTTGTATGGTTACGATATAGAGATTAC 326 Query 299 ATCCAGTAGTTTCTTACCTCTATTTGAGTCTGCACTCTACTTTGGGGTGGAGAAGCTTCT 358 ||||| ||||||||||||| | |||||| |||| ||||| |||||||||||||||||||| Sbjct 327 ATCCACTAGTTTCTTACCTTTGTTTGAGACTGCGCTCTATTTTGGGGTGGAGAAGCTTCT 386 Query 359 CTCTATATGCAAAAACTGGCTTTCAGTGTTGGCATCATCGAATGACAACGCATTACCGAA 418 ||||| |||||||| |||||||||||||||||||| ||||||||| | |||||||||||| Sbjct 387 CTCTAAATGCAAAAGCTGGCTTTCAGTGTTGGCATTATCGAATGATACCGCATTACCGAA 446 Query 419 AGTAGAATTATCTGACCTTATTCAGATTTGGAGTTTTGGTCTCGAGCATGCTGGAGAATT 478 | ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 447 ACTAGAATTGTCTGACCTTATTCAGATGTGGAGTTTTGGTCTCGAGCATGCTGGAGAATT 506 Query 479 TGTGCCAGATCTCTGTGTGGCCTATCTTGCAAAGAATTTCATGTTGGTGAAATCTGATAA 538 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 507 TGTACCAGATCTCTGTGTGGCCTATCTTGCAAAGAATTTCATGTTGGTGAAATCTGATAA 566 Query 539 GTATTTTGGAAATGTTCCATATGAGTTGTTGATGTGGTGCGTTAAACA-TCCTCACCTGA 597 |||||||||||||||||| ||||||||||||||||| ||| ||||||| ||| ||||||| Sbjct 567 GTATTTTGGAAATGTTCCGTATGAGTTGTTGATGTGTTGCATTAAACATTCC-CACCTGA 625 Query 598 CTGTACACAGTGAGATGGACCTTGTTGATGGACTTCTTATTTGGCTTGATGCCGGTGGAA 657 |||||||||| |||||| | |||| ||||| ||||||| ||||||||||| |||| ||| Sbjct 626 CTGTACACAGCGAGATGCATCTTGCTGATGCACTTCTTGTTTGGCTTGATACCGGCAGAA 685 Query 658 GATTGTCTGACTTACCAGAGAGTAGTCAAGATAACACAATCAACTTGATGGAACAGGTCC 717 || |||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct 686 GAATGTCTGACTTGTCGGATAGTAGTCAAGATAACACAATCAACTTGATGGAACAGGTCC 745 Query 718 GTTTTAGTCTTTTGCCGCTGTGGTTTATTGCAGGAAGAAGCAAGTCTCATGGTTTCTCAA 777 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 746 GTTTTAGTCTTTTGCCGCTGTGGTTTATTGCTGGAAGAAGCAAGTCTCATGGATTCTCAA 805 Query 778 AGTTTGCTGATCAAAGCATTGAATTGGTGACTAAACTAATGAAAATGCCATCCACATGCT 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 806 AGTTTGCTGATCAAAGCATTGAATTGGTGACTAAACTAATGAAAATGCCATCCACATGCT 865 Query 838 TGGTCGATAGTCTAACCGATGGCCCTCCAACTGATGTTAGAGTTCGGCTGACTGAATACA 897 |||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||||| Sbjct 866 TGGTCGATAGTCTAACAGATGGCCCTCCTACTGATCTTAGAGTTCGGCTGACCGAATACT 925 Query 898 GTGAGATATTGGATCTCTCAGGATGTCCACAGTTAAATGAAGCCAGCCTGCTACTGTCAA 957 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 926 CTGAGATATTGGATCTCTCAGGATGTCCACAGTTAAATGAAGCCAGTCTGCTACTGTCAA 985 Query 958 TACTGCCTAACTCGTATTTCGCAAACCTCAGGTGGAGGAAGAGTTTGGAAAGTTTCCTAA 1017 ||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 986 TACCGCCTAACTCGTATTTCGCAAACCTCAGGTGGAGAAAGAGTTTGAAAAGTTTCCTAA 1045 Query 1018 AGAACCCTGATGACGATGAAAGACATCAAGAACAAATATCTCACAGAACTTTACCAATTT 1077 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1046 AGAACCCTGATGACGATGAAAGACATCAAGAACAATTATCTCACAGAACTTTACCAATTT 1105 Query 1078 TGTCTTTTGAATCGGTGAAAGAGATTGATATTTCCAAGTGTCAGAGGCTTGATTATAAAG 1137 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1106 TGTCTTTCGAATCGGTGAAAGAGATTGATATTTCCAAGTGCCAGAGGCTTGATTATAAAG 1165 Query 1138 TTGTGATCAAGTGCTTCTCTAAGTCATTCCCATCATTAAGAAAACTAAGAGCTGCTTATC 1197 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1166 CTGTGATCAAGTGCTTCTCTAAGTCATTCCCATCATTAAGAAAACTGAGAGCTGCTTATC 1225 Query 1198 TCTTAAACATCAAGGTGTCTACCCTGCTTGAACTTCTCCTGAATTTTCGCGAGCTCACTG 1257 ||||||||||||||||||| || ||||||||||||||| ||||||||| |||||||||| Sbjct 1226 TCTTAAACATCAAGGTGTCCACAATGCTTGAACTTCTCCAGAATTTTCGTGAGCTCACTG 1285 Query 1258 AAGTTGATTTAACAGTTGATGTCTCTCCTATAATACCGGTTCAAGCATCTGTGTTTTACT 1317 |||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||| Sbjct 1286 AAGTTGATTTAACAGTTGATTTCGCTCCTATAATACCGGTTCAAGCATCGGTGTTTTACT 1345 Query 1318 CTGGCCAAGGTCATTGTTTGCTATCGAGTATCACAAGATTAACGCTGGAGGGTAGAAGTG 1377 |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||| Sbjct 1346 CTGGCCAAGGTCATTGTTCGCTATCGAATATCACAAGACTAACGCTGGAGGGTAGAAGTG 1405 Query 1378 ACATATGTGATATGGAACTACGGAGCATCTCTAGAGTATGTGAGTCGTTATGTTACCTGA 1437 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1406 ACATATGTGATATGGAACTACGGAGCATCTCTAGAGTATGTGATTCGTTATGTTACCTGA 1465 Query 1438 ACATAAAAGGGTGTGCACTACTCTCAGATGCATGTATAGCATCTGTTATACAGAGGTGTA 1497 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1466 ACATAAAAGGGTGTGCACTACTCTCAGATGCATGTATAGCATATGTTATACAGAGGTGTA 1525 Query 1498 AAAAATTATGCTCTCTCATAGTTTGCTATACCTCTTTCTCGGAAAATTCGATTTTGGCAC 1557 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1526 AGAAATTATGCTCTCTCATAGTTTGCTATACCTCTTTCTCGGAAAATTCGATTTTGGCAC 1585 Query 1558 TATGCGCTACTATATCTATGACCAATGAGCATATGGATATAAAT-TCAGTAGCATCCAAT 1616 ||||||||||||| |||||||||||||||||||||||| | || ||| ||||||||| | Sbjct 1586 TATGCGCTACTATTTCTATGACCAATGAGCATATGGAT-TCAAGCTCATTAGCATCCAGT 1644 Query 1617 CTTCAAACT-CTGCACATGAGTAAATGCGAGGGAATTAGTGAGACGTCGCTTCTTAACTT 1675 ||||||| | || |||||||||||||||||||||| ||||||||| || ||||| || || Sbjct 1645 CTTCAAA-TGCTTCACATGAGTAAATGCGAGGGAAGTAGTGAGACATCACTTCTAAAGTT 1703 Query 1676 GATAACTCATTCACAGAAAATGAAAAGTCTTTGCTTAAGGGATACAAAAGTTTCAGACAG 1735 |||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1704 AATAACTCAGACACAAAAAATGAAGAGTCTTTGCTTAAGGGATACAAAAGTTTCAGACAG 1763 Query 1736 TGTGCTATGTGAATTCCCCGGCTCTACCTTGGAAGCACTTGATATTTCAAATACCACGAT 1795 |||||| |||||||| ||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 1764 TGTGCTGTGTGAATTACCCGGCTCTTCCTTGGAAGCACTTGATATTTCAAATACCATGAT 1823 Query 1796 ATCTTGGATGGCTCTTGCTCGTGTAATTAGCAGAAATCCTAATCTAAAAACCCTCAAAGC 1855 |||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1824 ATCTAGGATGGCTCTTACTCATGTAATTAGCAGAAATCCTAATCTAAAAAGCCTCAAAGC 1883 Query 1856 CAGGGGATGTAAAAATCTACTCCAATTAGAAGTTGACGGCAGAACTGACAATTTCTCTCC 1915 ||||||||||||||||| || |||||| ||||||| || |||||||| |||| |||||| Sbjct 1884 AAGGGGATGTAAAAATCTGCTTCAATTACAAGTTGATGGGAGAACTGAAAATTCCTCTCC 1943 Query 1916 GTTGGTTTCTGGTCAAGAGGTGTTTAAATGTTTAAGCAAGGGGAGTGGATTGGAGGAGCT 1975 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1944 ATTGTTTTCTGGTCAAGAGGTGTTTAAATGTTTAAGCAAGGGGAGTGGATTGGAGGAACT 2003 Query 1976 TGAGATTGGTTGGGGGTTTTCTTATTTCTCTTTTGAGTCTTTGAGACCTGCAGCTTCGTT 2035 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2004 TGAGATTAGTTGGGGGTTTTCTTATTTCTCTCTTGAGTCTTTGAGACCTGCAGCTTCGTT 2063 Query 2036 CCTACGAGTTATAAGTGTGGGTTTGGGTGCTTCCTTAGGTGAAGATGTTTTAAAGCTTCT 2095 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2064 TCTACGAGTTATAAGTGTGGGTTTGGGTGCTTCCTTAGGTGAAGATGCTTTAAAGCTTCT 2123 Query 2096 ACCTTCAACTTGTCCTTTGCTAGAGTCTATCGTCCTCCATTTTCAGGAAATATCTGATTC 2155 | ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2124 ATCTTTAACTTGTCCTTTGCTAGAGTCTATCGTCCTCTGTTTTCAGGAAATATCTGATTC 2183 Query 2156 TGCCTTGACAAGTGTCCTGACATCGTTGAAGCACCTGCAAGAGTTAGCTTTGTCCTATTG 2215 ||||||||||||| |||||||||| | |||||||||||||||||||||||||||||||| Sbjct 2184 TGCCTTGACAAGTATCCTGACATCATCAAAGCACCTGCAAGAGTTAGCTTTGTCCTATTG 2243 Query 2216 CTTCGGTGAAATATCCCTTCAAAGTTTCAAGTTCTCTATGCCGAACCTGAGAAAACTAAG 2275 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2244 TTTCGGTGACATATCCCTTCAAAGTTTCAAGTTCTCTATGCCGAACCTGAGAAAACTTAG 2303 Query 2276 GCTTGAGAGGGTAACTCGTTGGATGACCAATGATGATTTACTTGTTCTCACACAAAGCTG 2335 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2304 GCTTGAGAGGGTATCTCGTTGGATGACCAATGATGATTTACTTGTTCTCACACAAAGCTG 2363 Query 2336 TCCGAACTTGACCGAGCTTTCATTAGTAGGATGTTTACACTTAACTTCAGATTGTCAACC 2395 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 2364 TCCGAACTTGACCGAGCTTTCGTTAGTAGGATGTTTACACTTAAATTCAGATTGTCAACC 2423 Query 2396 TATCATCTCAGCTGGATGGCCAGGAATGATTTCTCTTCATCTAGAGGAATGTGGAAGTAT 2455 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2424 TATCATCTCAGCTGGATGGCCGGGAATGATTTCTCTTCATCTAGAGGAATGTGGAAGTAT 2483 Query 2456 AACAGAGAATGGTGTCGCTTCTCTCTATGGTTGCATTGCTCTTGAAGACCTTTTTCTTCG 2515 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||| Sbjct 2484 AACAGAGAATGGTGTCGCTTCTCTCTATGGTTGCGTTGCTCTGGAAGACCTTTTGCTTCG 2543 Query 2516 CCACAACGGCTCTGGAATACAGAAAAGCTTCCTTCTTGATGCTACTTTGAAGTTTCCGAT 2575 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2544 CCACAACGGCTCTGGAATACAGAAAAGCTTCCTTCTTGATGCTACGTTGAAGTTTCCGAA 2603 Query 2576 GCTCCGGCTGGTATCTCTGGACATGTGTGATGCAAAGGAAGGCGGTTTTGATGTCCCAGA 2635 ||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 2604 GCTTCGGCTGGTATCTCTGGACATGTGTGATGCAAAGGAAGGCGGCTTCGATGTCCCAGA 2663 Query 2636 GGAGAAAGAAGAAGGTCGTAGTCTAAGCATAGTCAAGATCAGTAGATGCAAGTCTGATAG 2695 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 2664 GGAGAAAGAAGAAGGTCGTAGTCTAAGCATAGTGAAGATCAGTAGATGCAAGTCTGAGAG 2723 Query 2696 ATGCTCGCTGGGAAGACGTGCGGCTCCA-ATGCATAGAGAGACGCTGGTTATGTTATGGA 2754 | || ||||||||||| | | ||||||| || ||||||||||||||||| |||||||||| Sbjct 2724 AAGCGCGCTGGGAAGAGGCGTGGCTCCAGAT-CATAGAGAGACGCTGGTCATGTTATGGA 2782 Query 2755 ATGGCCAAACCCTCACTAAAACACTGCTCAAACAAAGACTTT 2796 ||||||||| | |||||||||| || || ||||||||||||| Sbjct 2783 ATGGCCAAAACTTCACTAAAACGCTACTAAAACAAAGACTTT 2824 > Ahg901667 jgi|Araly1|901667|Al_scaffold_0004_2317 Length=498 Score = 296 bits (160), Expect = 6e-79 Identities = 270/317 (85%), Gaps = 31/317 (10%) Strand=Plus/Plus Query 154 GGCTTATTC-AGGAATCCTCGTATTTCCATGGCCTTCTAAGCGGAAGCTTCAGTGAATCA 212 |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 206 GGCTTA-TCGAGGAATCCTCGTATTTCCATGGCCTTCTAAGTGGAAGCTTCAGTGAATCA 264 Query 213 GGCCTTGATCATATCTCTGTTGAATGGAA-CCTAGAGAGTTTCTTGAATCTTCTCATGTG 271 ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| || Sbjct 265 GGCCTTGATCATATCTCTGTTGAATGGAATCC-AGAGACTTTCTTGAATCTTCTCA--TG 321 Query 272 TTTGTATGGTTACGATATAGAGATTACATCCAGTAGTTTCTTACCTCTATTTGAGTCTGC 331 || | || | ||| | | |||| ||| | | | | |||| || |||| Sbjct 322 --TG--T--TT--G-TAT-G-G-TTAC-TCC---A---T-TGA----TATTACAG-CTGC 356 Query 332 ACTCTACTTTGGGGTGGAGAAGCTTCTCTCTATATGCAAAAACTGGCTTTCAGTGTTGGC 391 || || |||||||||| || ||||||||||| |||||||| |||||||||||| ||||| Sbjct 357 GCTTTATTTTGGGGTGGCGAGGCTTCTCTCTAAATGCAAAAGCTGGCTTTCAGTTTTGGC 416 Query 392 ATCATCGAATGACAACGCATTACCGAAAGTAGAATTATCTGACCTTATTCAGATTTGGAG 451 |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 417 ATCATCGAATGACACCGCATTACCGAAACTAGAATTGTCTGACCTTATTCAGATTTGGAG 476 Query 452 TTTTGGTCTCGAGCATG 468 ||||||||||||||||| Sbjct 477 TTTTGGTCTCGAGCATG 493 Score = 158 bits (85), Expect = 3e-37 Identities = 114/127 (90%), Gaps = 5/127 (4%) Strand=Plus/Plus Query 31 ATCAACAAGACGACGCATCTTCTTCGATTCAAGAGATTTCGATCTCAGCTTCTGAAATTG 90 |||||| || || ||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 44 ATCAAC--GA-GAGGCATCTTCTTCGAGTCAAGAGATTTCGATCTCAGCTTCTGAAATCG 100 Query 91 CT-TCCTGGGATATGTCAGAGATACTCTCTTACGGAAGTGTAAAAGTTCGAGCTCATCGA 149 | ||||||| | ||||| | ||||||||||||||||| ||||||||||||||||||||| Sbjct 101 -TATCCTGGGGTTTGTCAAAAATACTCTCTTACGGAAGAGTAAAAGTTCGAGCTCATCGA 159 Query 150 ACTAGGC 156 ||||||| Sbjct 160 ACTAGGC 166 > Ahg901652 jgi|Araly1|901652|Al_scaffold_0004_2302 Length=639 Score = 226 bits (122), Expect = 8e-58 Identities = 146/157 (93%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 154 GGCTTATTC-AGGAATCCTCGTATTTCCATGGCCTTCTAAGCGGAAGCTTCAGTGAATCA 212 |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 197 GGCTTA-TCGAGGAATCCTCGTATTTCCATGGCCTTCTAAGTGGAAGCTTCAGTGAATCA 255 Query 213 GGCCTTGATCATATCTCTGTTGAATGGAA-CCTAGAGAGTTTCTTGAATCTTCTCATGTG 271 ||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct 256 GGCCTTGATCATATCTCTGTTGAATGGAATCC-AGAGACTTTCTTGAATCTTCTCATGTG 314 Query 272 TTTGTATGGTTACGATATAGAGATTACATCCAGTAGT 308 ||||||||||||| || || ||||||||||||||| Sbjct 315 TTTGTATGGTTACTCCATTGATATTACATCCAGTAGT 351 Score = 134 bits (72), Expect = 5e-30 Identities = 101/114 (89%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 31 ATCAACAAGACGACGCATCTTCTTCGATTCAAGAGATTTCGATCTCAGCTTCTGAAATTG 90 |||||| || || ||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 44 ATCAAC--GA-GAGGCATCTTCTTCGAGTCAAGAGATTTCGATCTCAGCTTCTGAAATCG 100 Query 91 CT-TCCTGGGATATGTCAGAGATACTCTCTTACGGAAGTGTAAAAGTTCGAGCT 143 | ||||||| | ||||| | ||||||||||||||||| ||||||||||||||| Sbjct 101 -TATCCTGGGGTTTGTCAAAAATACTCTCTTACGGAAGAGTAAAAGTTCGAGCT 153 > Ahg934449 jgi|Araly1|934449|scaffold_402437.1 Length=226 Score = 224 bits (121), Expect = 3e-57 Identities = 167/188 (89%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 1186 GAGCTGCTTATCTCTTAAACATCAAGGTGTCTACCCTGCTTGAACTTCTCCTGAATTTTC 1245 |||||||||||||||||||||| |||||||| || ||||||||||||||| |||||| | Sbjct 1 GAGCTGCTTATCTCTTAAACATGAAGGTGTCCACAATGCTTGAACTTCTCCAGAATTTCC 60 Query 1246 GCGAGCTCACTGAAGTTGATTTAACA-GTTGATGTC-TCTCCTATAATACCGGTTCAAGC 1303 |||||||||||||||||| ||||| | |||||| | ||||| ||||||||||||||| Sbjct 61 GCGAGCTCACTGAAGTTGGTTTAA-ATGTTGAT-ACAGCTCCTGTAATACCGGTTCAAGA 118 Query 1304 ATC--T-GTGTTTTACTCTGGCCAAGGTCATTGTTTGCTATCGAGTATCACAAGATTAAC 1360 ||| | |||||||||||||||||||||||||||| |||||||| |||||||||| |||| Sbjct 119 ATCGGTGGTGTTTTACTCTGGCCAAGGTCATTGTTCGCTATCGAATATCACAAGACTAAC 178 Query 1361 GCTGGAGG 1368 |||||||| Sbjct 179 GCTGGAGG 186 > Ahg934429 jgi|Araly1|934429|scaffold_402417.1 Length=226 Score = 224 bits (121), Expect = 3e-57 Identities = 167/188 (89%), Gaps = 7/188 (4%) Strand=Plus/Plus Query 1186 GAGCTGCTTATCTCTTAAACATCAAGGTGTCTACCCTGCTTGAACTTCTCCTGAATTTTC 1245 |||||||||||||||||||||| |||||||| || ||||||||||||||| |||||| | Sbjct 1 GAGCTGCTTATCTCTTAAACATGAAGGTGTCCACAATGCTTGAACTTCTCCAGAATTTCC 60 Query 1246 GCGAGCTCACTGAAGTTGATTTAACA-GTTGATGTC-TCTCCTATAATACCGGTTCAAGC 1303 |||||||||||||||||| ||||| | |||||| | ||||| ||||||||||||||| Sbjct 61 GCGAGCTCACTGAAGTTGGTTTAA-ATGTTGAT-ACAGCTCCTGTAATACCGGTTCAAGA 118 Query 1304 ATC--T-GTGTTTTACTCTGGCCAAGGTCATTGTTTGCTATCGAGTATCACAAGATTAAC 1360 ||| | |||||||||||||||||||||||||||| |||||||| |||||||||| |||| Sbjct 119 ATCGGTGGTGTTTTACTCTGGCCAAGGTCATTGTTCGCTATCGAATATCACAAGACTAAC 178 Query 1361 GCTGGAGG 1368 |||||||| Sbjct 179 GCTGGAGG 186 > Ahg934455 jgi|Araly1|934455|scaffold_402443.1 Length=664 Score = 187 bits (101), Expect = 4e-46 Identities = 128/141 (91%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 353 GCTTCTCTCTATATGCAAAAACTGGCTTTCAGTGTTGGCATCATCGAATGACAACGCATT 412 ||||||||||| |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct 524 GCTTCTCTCTAAATGCAAAAGCTGGCTTTCAGTTTTGGCATCATCGAATGACACCGCATT 583 Query 413 ACCGAAAGTAGAATTATCTGACCTTATTCAGATTTGGAGTTTTGGTCTCGAGCATGCTGG 472 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 584 ACCGAAACTAGAATTGTCTGACCTTATTCAGATTTGGAGTTTTGGTCTCGAGCATGGTT- 642 Query 473 AGAAT-TTGTGCCAGATCTCT 492 ||||| ||| || | |||||| Sbjct 643 AGAATCTTGCGCGAAATCTCT 663 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111947230055 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5