BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G36720.1
Length=3629
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482652 jgi|Araly1|482652|fgenesh2_kg.4__1712__AT2G36720.1 4903 0.0
Ahg942815 jgi|Araly1|942815|scaffold_603359.1 547 2e-154
> Ahg482652 jgi|Araly1|482652|fgenesh2_kg.4__1712__AT2G36720.1
Length=3506
Score = 4903 bits (2655), Expect = 0.0
Identities = 2977/3129 (95%), Gaps = 36/3129 (1%)
Strand=Plus/Plus
Query 406 CAGTTCGGTTTGGCAATCTCCGGTTAAGCGGTTGG-CTGTAGACGGCGAGTGTGGTGAGG 464
||||||||||||||||||||||||||||||||||| || | ||||| |||||||||||||
Sbjct 352 CAGTTCGGTTTGGCAATCTCCGGTTAAGCGGTTGGCCT-TTGACGGTGAGTGTGGTGAGG 410
Query 465 CTGGTGATAGGAGTAGGACTAGCTGTAAGAGAATTAAAACGACTCAAGTCAATGGTTTTA 524
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 411 CTGGTGATAGGAGTAGGACTAGCTGTAAGAGAATTAAAACGACTCAGGTCAATGGTTTTA 470
Query 525 TTGTTTACACTAGAACTAGGAAGACTAAATTCACCAAGCTTCATGAACAAGAAGATGAAA 584
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 471 TTGTTTACACTAGAACTAGGAAGACTAAATTCACCAAGCTTCATGAACAAGGAGATGAAA 530
Query 585 ATGCTGGATTG-TCGAATCATCTCGAGGA-GTCGAAACCAACGAGTGGTGTTAC-AAGTG 641
||||||||||| | ||| | |||| | ||| ||| || | | || | | | ||
Sbjct 531 ATGCTGGATTGTTGGAA--A-ATCGA--ATGTC-AAATCATCTTGAGGAG-T-CGAA--A 580
Query 642 GCTTC-GGTGGTGATATGTGTCGCAGCAGCTCGGTAGGTGAAACTAACGTTAGTGGGAGC 700
| | ||||| || | | ||||| ||||||||||||| |||||||||| |
Sbjct 581 CCAACAAATGGTGCTA-----C-AAATGGCTCGATAGGTGAAACTAAAGTTAGTGGGAAC 634
Query 701 TCTTGTGTTAAGAATACACTTGTTGAGAGCTCCTCCGGGAAAGTCGTTGT-GATAGAGCG 759
|||||| ||||||||||| ||||||||||| || |||||||| | | ||| || ||||||
Sbjct 635 TCTTGTATTAAGAATACATTTGTTGAGAGCCCCGCCGGGAAAATTGATGTGGA-AGAGCG 693
Query 760 GTTAGTTACTGGCGGCTTAGCTGAAAGTCCGGCAGTTGAGACTGACAGTAGCTCATTAGT 819
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 694 GTTAGTTACTGGCAGCTTAGCTGAAAGTCCGGCAGTTGTGACTGACAGTAGCTCATTAGT 753
Query 820 GGATGTTGTAATTGACGACATCAATTTTGTGGAATTGTTACATGAAGCGATTCCTGTTGA 879
|| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 754 CGACGTTGTAATTGACGACATCAATTTTGTAGAATTGTTACATGAAGAGATTCCTGTTGA 813
Query 880 AATTCTGTCTGAAGGAAGCCTGGATTTTGAGGTGAAA-AGACTAGGAACTAAAGTTAGAA 938
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 814 AATTCTGTCTGAAGGAAGCCTGGATTTTGAGGT-AAAGAGACTAGGAACTAAAGTTAGAA 872
Query 939 CCATGGGAAAATCCTATAGCGTCTCGGAGAAGAAAAAGCATGGATCTTTTAAGCGTACAG 998
||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||
Sbjct 873 CCATGGGAAAATCTTATAGCGTCTCAGAGAAGAAAAGGCATGGATCTTTTAAACGTACAG 932
Query 999 CACAGATCTATAAATCTATTGTGAGAATGAAGAAGGTAAATAATTTGGTCCCTGAGAATG 1058
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 933 CACAGATCTATAAATCTATTGTGAGAATGAAGAAGGTAAACAATTTGGTGCCTGAGAATG 992
Query 1059 TAGAGGTTCTTGCGGAACCAGACTTTGGCCGTGAGGGATTAGATGAACAGAGTCATTCTG 1118
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 993 TAGAGGTTCTTGCGGAACCAGACTTTGGCCATGAGGGATTAGATGAACAGAGTCATTCTG 1052
Query 1119 TCAGTCTT-GCGGACAAGTCCATTTTAATCCGCAGCAGGCCAGAAACAGTGA-GGGATCT 1176
||||| || |||||||||||||||||||||||||| |||||||||||||||| |||| ||
Sbjct 1053 TCAGT-TTGGCGGACAAGTCCATTTTAATCCGCAGGAGGCCAGAAACAGTGAGGGGA-CT 1110
Query 1177 TTTTGAGACCGGTTTACTCGATGGTTTGTCGGTGGTTTACATGGGTACTGTTAAGTCTCA 1236
||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1111 TTTTGAGACCGGTATACTCGATGGTTTGTCTGTGGTTTACACGGGTACTGTTAAGTCTCA 1170
Query 1237 AGCCTTTCCTCTCCGTGGCATCATTAGAGATGGTGGAATTTTGTGCTCATGTTCCTCATG 1296
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1171 AGCCTTTGGTCTCCGTGGCATCATTAAAGATGGTGGAATTTTGTGCTCATGTTCCTCATG 1230
Query 1297 TGATTGGGCTAACGTTATTTCAACTTCCAAATTTGAGATTCATGCTTGTAAACAATACCG 1356
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1231 TGATTGGGCTCATGTTATTTCAACTTCCAAATTTGAGATTCATGCTTGTAAACAATACAG 1290
Query 1357 AAGAGCATCACAATACATTTGCTTTGAGAATGGTAAGAGCCTGCTAGATGTTCTAAATAT 1416
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1291 ACGAGCATCACAATACATTTGCTTTGAGAATGGTAAGAGCCTGCTAGATGTTTTAAATAT 1350
Query 1417 AAGTAGGAACACTCCTCTACATGCTCTCGAAGCAACAATTCTGGATGCTGTTGATTATGC 1476
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1351 AAGTAGGAACACTCCTCTACATGCTCTCGAAGCAACAATTCTGGCTGCTGTTGATTATGC 1410
Query 1477 ATCTAAAGAAAAACGTTTTACCTGTAAAAGATGCAAAGGTCCCTTCCCTTTCTCCTCTCT 1536
|||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1411 GTCTAAAGAAAAATGTTTTACCTGTAAAAGATGCAAAGGTTCCTTCCCTTTCTCCTCTCT 1470
Query 1537 TGGCCATAGAGGGTTTCTGTGTAAGTCATGCTCGGAGGTAGAAACTTCTCAGGCCAGCCT 1596
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1471 TGGCCATAGAGGGTTTCTGTGTATGTCATGCTCGGAGGTAGAAACTTCTCAGGCCAGCCC 1530
Query 1597 TGCTGCGACAAGGACCTCAACTAGTGCTCCTGCGTGCATAACATCTCCGGTTAAGAGTAG 1656
|||||| || ||||||||||| ||||||||||| |||||| ||||||| |||||||||||
Sbjct 1531 TGCTGCTACGAGGACCTCAACGAGTGCTCCTGCATGCATAGCATCTCCCGTTAAGAGTAG 1590
Query 1657 ATTGAAGATAACAAGAAAGCCATCAGAATCCACGTCAATATCACCAGTATTTATGTCATC 1716
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1591 ATTGAAGATAACAAGAAAGCCATCAGAATCCACGTCAATATCGCCAGTATTTATGTCACC 1650
Query 1717 ACTTGGAAATAGCACTCGAAAGATAACAAGAAAGGCTTTACGTCAAGCTTTGGTTGGGAA 1776
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1651 ACTTGGAAATAGCACTCGAAATATAACAAGAAAGGCATTACGTCAAGCTTTGGTTGGGAA 1710
Query 1777 GGCTTATCTCAGTGCTTCTACAAATGTATCTTCACAAAAGAAGTGCCGATCAAAATTTAA 1836
||||||||||||||||||||||||| ||||||||||||| |||||| || | ||||||||
Sbjct 1711 GGCTTATCTCAGTGCTTCTACAAATATATCTTCACAAAATAAGTGCAGACCTAAATTTAA 1770
Query 1837 GAAGATGTTGACCCAACATTCTGTGACCCCCAAGGCTTTGAAAAGTGTGTCCCTTTCCGT 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1771 GAAGATGTTGACCCAACATTCTGTGACCCCCAAGGCTTTGAAAAGTGTGTCCCTTTCTGT 1830
Query 1897 TTCTTCGAAAAAGAGGAGTTATAGATTAGCAAGAAAGGATCAAGGATTGCACAAGTTAGT 1956
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1831 TTCTTCGAAAAAGAGGAGTTATAGATTAACAAGAAAGGATCAAGGATTGCATAAGTTAGT 1890
Query 1957 GTTTGATAGAGGGGGATTACCAGAGGGAACTGAACTAGGCTACTATGCTCGTGGACAGAA 2016
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1891 GTTTGAGAGAGGGGGATTACCAGAGGGAACTGAACTAGGATACTATGCTCGTGGACAGAA 1950
Query 2017 ATTGCTCGGAGGCTACAAAATGGGCGCTGGAATATATTGTTACTGTTGCAAGTGC-GAGG 2075
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1951 ATTGCTCGGAGGCTACAAAATGGGCGCTGGAATATATTGTTACTGTTGCAAGT-CTGAGG 2009
Query 2076 TGAGCCCCTCTCTGTTCGAAGCTCATGCAGGCTGGGCATCTCGTAGAAAACCTTATTTTT 2135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2010 TGAGCCCCTCTCTGTTCGAAGCTCATGCAGGCTGGGCATCTCGTAGAAAACCTTATTTTT 2069
Query 2136 ACATATATACATCTAATGGTGTATCTCTTCACGAATGGGCAACTACTTTCTCACATGGTC 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2070 ACATATATACATCTAATGGTGTATCTCTTCACGAATGGGCAACTACTTTCTCACAAGGTC 2129
Query 2196 GGAAATATTCTGCTAATGATAATAACGACTTGTGTGTTATTTGTGCTGATGGTGGAAATC 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2130 GGAAATATTCTGCTAATGATAATAACGACTTGTGTGTTATTTGTGCTGATGGTGGAAATC 2189
Query 2256 TTTTGCTCTGCGATAGCTGCCCAAGAGCTTTCCACATAGAATGTGTTTCCCTTCCGAGTA 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2190 TTTTGCTCTGCGATAGCTGCCCAAGAGCTTTCCACATAGAATGTGTTTCCCTTCCGAGTA 2249
Query 2316 TACCTCGTGGTAACTGGCATTGCAAATACTGCGAGAATAAGTTCACGAGCGAAATTGCTG 2375
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2250 TACCTCGTGGTAACTGGCATTGCAAATACTGCGAGAATAAGTTCACGAGCGAAATTACTG 2309
Query 2376 GAGAGTACAATGTCAATTCTTCTGCAGTTGGGCAACTAGAAGGAGTTGATCCTGTTGATC 2435
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2310 GAGAGTACAATGTCAATTCTTCTGCAGTTGGGCAACTAGAAGGAGTTGATTCTGTTGATC 2369
Query 2436 AATTAGCTGGACGATGCATTCGCGTTGTCAAGAACATGGAAGCTGAAACAAATGGGTGTG 2495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2370 AATTAGCTGGACGATGCATTCGCGTTGTCAAGAACATGGAAGCTGAAACAAATGGGTGTG 2429
Query 2496 TATTATGCAGTGGTTCTGATTTTTGTAGATCAGGATTTGGGCCACGGACAATCATAATAT 2555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2430 TATTATGCAGTGGTTCTGATTTTTGTAGATCAGGATTTGGGCCACGGACAATCATAATAT 2489
Query 2556 GTGATCAGTGTGAAAAGGAGTACCACATTGGATGTTTGAGTAGTCAGAATATTGTGGATT 2615
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2490 GTGATCAGTGTGAAAAGGAGTACCACATTGGATGTTTGAGTAGTCAGAATATTGTGGATC 2549
Query 2616 TAAAGGAATTACCTAAAGGAAACTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCCA 2675
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2550 TGAAGGAATTACCTAAAGGAAACTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCCA 2609
Query 2676 CATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTTTGGGAATAA 2735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2610 CATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTTTGGGAATAA 2669
Query 2736 TACAGACGAAGCAAGAGAGAAATGATGTATATTCCATCAGTGATCTTGACATCAGATGGA 2795
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2670 TACAGACGAAGAAAGAAAGAAATGATGTATATTCCATCAGTGATCTTGACATCAGATGGA 2729
Query 2796 GACTGATCAGCGGCAAAGTTACTTCTCCTGAAAGCCGAATGTTACTGTCTCAGGCATTGG 2855
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2730 GACTGATCAGCGGCAAAGTTACTTCTCCTGAAAGCCGAATGTTACTCTCTCAGGCATTGG 2789
Query 2856 CTATTTTTCATGATTGCTTCGATCCTATAGTTGATCCACTTTCTGGGAGCAATCTTATTC 2915
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 2790 CTATTTTTCATGATTGCTTTGATCCTATAGTTGATCCACTTTCTGGGCGCAATCTTATTC 2849
Query 2916 CGAGAATGGTTTACGGGAAGACTATGCAAGGACAAGACTACGGGGGAATCTGCTGTGCTG 2975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2850 CGAGAATGGTTTACGGGAAGACTATGCAAGGACAAGACTACGGGGGAATCTGCTGTGCTG 2909
Query 2976 TTTTGACTGTTAATGCGACTGTTGTTTCTGCTGGACTATTACGAGTATTTGGCCGAGAGG 3035
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 2910 TTTTGACTGTTAATGCGACTGTTGTTTCTGCTGGACTACTGCGAGTATTTGGCCGAGAGG 2969
Query 3036 TTGCAGAACTTCCATTAGTTGCAACACGCATGTGCAGCCGAGAGAAGGGCTACTTTCAAT 3095
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2970 TTGCAGAACTTCCATTAGTTGCAACACGCATGTGCAGCCGAGAAAAGGGCTACTTTCAAT 3029
Query 3096 TGCTCTTTTCCTGCATTGAGAAGCTACTCTCATCCCTGAATGTTGAAAGCATCGTGGTTC 3155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3030 TGCTCTTTTCCTGCATTGAGAAGCTACTCTCATCCCTGAATGTTGAAAGCATCGTGGTTC 3089
Query 3156 CAGCAGCTGAAGAGGCAGAGCCCTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCAC 3215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3090 CAGCAGCTGAAGAGGCAGAGCCCTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCAC 3149
Query 3216 CTGAACAGCTCAGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCAT 3275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3150 CTGAACAGCTCAGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCAT 3209
Query 3276 CCATGCTGCAGAAACCAGT-CGATTCACACCAAATCATTGACAAGACAATCGAAACCGGT 3334
||||||||||||||||||| | || ||||||||||||||||||||| |||||||||| ||
Sbjct 3210 CCATGCTGCAGAAACCAGTGC-ATGCACACCAAATCATTGACAAGAAAATCGAAACCAGT 3268
Query 3335 GCATCTTTAGAAGAAAATTTTGATTTGAAACAAGCCAATGAGTTGTATGTTCATCCTTTG 3394
| |||||||||||||| || |||| ||||||||||||||||||||||||| |||||||||
Sbjct 3269 GTATCTTTAGAAGAAAGTTCTGATATGAAACAAGCCAATGAGTTGTATGTGCATCCTTTG 3328
Query 3395 TGTTGAGGCAAAGCAAGTCATGGATTTAGTGAAAGATGGATTAAAGGGTGAAGCGTTTAG 3454
|||||||| ||||||||||| |||||| |||||||||||||||||| |||||| ||||||
Sbjct 3329 TGTTGAGGTAAAGCAAGTCACGGATTTGGTGAAAGATGGATTAAAGAGTGAAGTGTTTAG 3388
Query 3455 GTTTTAAACAAGTTCTTACAACATATA--CTAGTGTAAATTTTTGTAGATGCGAAGCTCt 3512
|||||||| | ||||||||||| | | || ||||||||||||||||||||||||||||
Sbjct 3389 GTTTTAAATGACTTCTTACAACAGAGAGACTTGTGTAAATTTTTGTAGATGCGAAGCTCT 3448
Query 3513 tttttgtta 3521
|||||||||
Sbjct 3449 TTTTTGTTA 3457
Score = 248 bits (134), Expect = 2e-64
Identities = 213/249 (86%), Gaps = 14/249 (6%)
Strand=Plus/Plus
Query 15 CCAGTGGCTGCAAAATCCTAAATCTC-ACCGAAAAGGATTTTGTATTGTTACATCCTCTT 73
|||||||||||||||||||||||| | ||| |||||||||||| | || || ||||
Sbjct 1 CCAGTGGCTGCAAAATCCTAAATCCCAACCCAAAAGGATTTTG---T-TT-CA---TCTT 52
Query 74 CTTCTTCCTCCAGATCCATGTATGAAACCTCCCCTGAACCCTAATTTAGCTATCGAATTT 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 53 CTTCTTCCTCCAGATCCATGTATGAAACCTCCCCTGAACCCTAATTTAGCTATCGAATTT 112
Query 134 GAGATTCGATCCGATGTTTACTTCCAAATCTTCGTTTCGTCTCTGA-TAATATAACTCCA 192
|||||||||||||||| | ||||| ||||| ||| ||||||||||| ||| | | | |||
Sbjct 113 GAGATTCGATCCGATGCTCACTTCTAAATCCTCGATTCGTCTCTGAATAACA-ACC-CCA 170
Query 193 TCGTAATAGAACTGATT-TCAAGACGGTTCGTTTCGTTTTCCTCTATCCCAGATTCGGAA 251
||||||| | || || || | |||||||||||||| |||||| ||||||| | ||
Sbjct 171 TCGTAATCGT-CTAATACTCTTCAATGTTCGTTTCGTTTTTCTCTATGCCAGATTTGAAA 229
Query 252 AGCTACCTT 260
|||||||||
Sbjct 230 AGCTACCTT 238
> Ahg942815 jgi|Araly1|942815|scaffold_603359.1
Length=682
Score = 547 bits (296), Expect = 2e-154
Identities = 318/329 (97%), Gaps = 0/329 (0%)
Strand=Plus/Plus
Query 2987 AATGCGACTGTTGTTTCTGCTGGACTATTACGAGTATTTGGCCGAGAGGTTGCAGAACTT 3046
||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct 270 AATGCGACTGTTGTTGCTGCTGGACTACTAAGAGTATTTGGCCGAGAGGTTGCAGAACTT 329
Query 3047 CCATTAGTTGCAACACGCATGTGCAGCCGAGAGAAGGGCTACTTTCAATTGCTCTTTTCC 3106
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 CCATTAGTTGCAACACGCATGTGCAGCCGAGAGAAGGGCTACTTTCAATTGCTCTTTTCT 389
Query 3107 TGCATTGAGAAGCTACTCTCATCCCTGAATGTTGAAAGCATCGTGGTTCCAGCAGCTGAA 3166
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct 390 TGCATTGAGAAGCTACTCTCATCCCTGAATGTTGGAAGCATAGTGGTTCCAGCAGCTGAA 449
Query 3167 GAGGCAGAGCCCTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCACCTGAACAGCTC 3226
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 450 GAGGAAGAGCATTTATGGATGAACAAATTTGGGTTCAGAAAACTTGCACCTGAACAACTC 509
Query 3227 AGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCATCCATGCTGCAG 3286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 AGTAAGTATATAAAGATATGCTACCAAATGGTGAGGTTCAAAGGAGCATCCATGCTGCAG 569
Query 3287 AAACCAGTCGATTCACACCAAATCATTGA 3315
|||||||| ||||||||||||||||||||
Sbjct 570 AAACCAGTTGATTCACACCAAATCATTGA 598
Score = 226 bits (122), Expect = 1e-57
Identities = 128/131 (98%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 2615 TTAAAGGAATTACCTAAAGGAAACTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCC 2674
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 141 TTAAAAGAATTACCTAAAGGAAATTGGTTTTGCTCCATGGACTGTACGAGGATCAACTCC 200
Query 2675 ACATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTTTGGGAATA 2734
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 201 ACATTACAAAAGTTACTTCTTGGTGGGGCGGAGAAGCTTTCAGATTCTTCTATGGGAATA 260
Query 2735 ATACAGACGAA 2745
|||||||||||
Sbjct 261 ATACAGACGAA 271
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137083377946
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5