BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G36750.1
Length=1577
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482658 jgi|Araly1|482658|fgenesh2_kg.4__1718__AT2G36750.1 2355 0.0
Ahg482660 jgi|Araly1|482660|fgenesh2_kg.4__1720__AT2G36800.1 1166 0.0
Ahg934312 jgi|Araly1|934312|scaffold_402300.1 1081 0.0
> Ahg482658 jgi|Araly1|482658|fgenesh2_kg.4__1718__AT2G36750.1
Length=1529
Score = 2355 bits (1275), Expect = 0.0
Identities = 1427/1503 (95%), Gaps = 0/1503 (0%)
Strand=Plus/Plus
Query 21 AGAGAGTTCCTCATGGCATCGGAATTTCGTCCTCCTCTTCATTTTGTTCTCTTCCCTTTC 80
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1 AGAGAGTTCCTCATGGCATCCGAATTTCGTCCTCCTCTTCACTTTGTTCTCTTCCCTTTC 60
Query 81 ATGGCTCAAGGCCACATGATCCCAATGGTAGATATTGCAAGGCTCCTGGCTCAGCGCGGG 140
||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct 61 ATGGCTCAAGGTCACATGATCCCCATGGTGGATATTGCAAGGCTCTTGGCTCAGCGCGGG 120
Query 141 GTGACTATAACCATTGTCACTACACCTCAAAACGCAGGCCGGTTCAAGAACGTTCTTAGC 200
|||||||||||||||||||| || ||||| |||||||||||||||||||||||| |||||
Sbjct 121 GTGACTATAACCATTGTCACGACGCCTCACAACGCAGGCCGGTTCAAGAACGTTTTTAGC 180
Query 201 CGGGCTATCCAATCCGGCTTGCCCATCAATCTCGTGCAAGTAAAGTTTCCATCTCAAGAA 260
||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 181 CGGGCCATCCAGTCCGGCTTGCCCATCAATCTTGTGCAAGTAAAGTTTCCATCTCAAGAA 240
Query 261 TCGGGTTCACCGGAAGGACAGGAGAATTTGGACTTGCTCGATTCATTGGGGGCTTCATTA 320
||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||||||
Sbjct 241 TCGGGTTCACCCGAAGGACAGGAGAATTTGGACTTGCTGGATTCGTTGGGGGCGTCATTA 300
Query 321 ACCTTCTTCAAAGCATTTAGCCTGCTCGAGGAACCAGTCGAGAAGCTCTTGAAAGAGATT 380
|||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 301 ACCTTCTTCAAAGCATCTAGCCTGCTTGAGGAACCGGTCGAGAAGCTCTTGAAAGAGATT 360
Query 381 CAACCTAGGCCAAACTGCATAATCGCTGACATGTGTTTGCCTTATACAAACAGAATTGCC 440
||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct 361 CAACCTAGGCCAAGCTGCATAATCGCCGACATGTGTTTGCCTTATACAAACCGAATTGCC 420
Query 441 AAGAATCTTGGTATACCAAAAATCATCTTTCATGGCATGTGTTGCTTCAATCTTCTTTGT 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AAGAATCTTGGTATACCAAAAATCATCTTTCATGGCATGTGTTGCTTCAATCTTCTTTGT 480
Query 501 ACGCACATAATGCACCAAAACCACGAGTTCTTGGAAACTATAGAGTCTGACAAGGAATAC 560
|||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||| |||
Sbjct 481 ACGCACATTATGCACCAAAACTACGAGTTATTGGAAACTATAGAGTCTGAAAAGGAGTAC 540
Query 561 TTCCCCATTCCTAATTTCCCTGACAGAGTTGAGTTCACAAAATCTCAGCTTCCAATGGTA 620
||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 541 TTCTCCATTCCAAATTTCCCTGACCGAGTTGAGTTCACAAAATCTCAGCTTCCAATGGTT 600
Query 621 TTAGTTGCTGGAGATTGGAAAGACTTCCTTGACGGAATGACAGAAGGGGATAACACTTCT 680
||||||||||||||||||||||| || ||||||| ||||||||||| |||||||||||||
Sbjct 601 TTAGTTGCTGGAGATTGGAAAGAGTTTCTTGACGAAATGACAGAAGCGGATAACACTTCT 660
Query 681 TATGGTGTGATTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTACAAG 740
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TTTGGTGTGATTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTACAAG 720
Query 741 AAGGTTAAAGCGGGTAAGATATGGAGCATCGGACCGGTTTCCTTGTGCAACAAGTTAGGA 800
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| |||||
Sbjct 721 AAGGTTAAAGCCGGTAAGGTATGGAGCATCGGGCCGGTTTCCTTGTGCAACAAGGTAGGA 780
Query 801 GAAGACCAAGCTGAGAGGGGAAACAAGGCGGACATTGATCAAGACGAGTGTATTAAATGG 860
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 781 GAAGACAAAGCTGAGAGGGGAAACAAGGCGGCCATTGATCAAGACGAGTGTATTAAATGG 840
Query 861 CTTGATTCTAAAGAAGAAGGGTCGGTGCTATATGTTTGCCTTGGAAGTATATGCAATCTT 920
|||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||
Sbjct 841 CTTGATTCTAAAGAAGTAGGGTCAGTTCTATATGTTTGCCTTGGAAGTATATGCAATCTT 900
Query 921 CCTCTGTCTCAGCTCAAAGAGCTCGGCTTAGGCCTCGAGGAATCCCAAAGACCTTTCATT 980
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 901 CCTCTGTCTCAGCTCAAAGAGCTCGGGTTAGGCCTCGAGGAATCCCAAAGGCCTTTCATT 960
Query 981 TGGGTCATAAGAGGTTGGGAGAAGTATAACGAGTTACTTGAATGGATCTCAGAGAGCGGT 1040
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 961 TGGGTCATAAGAGGTTGGGAGAAGTATAACGAGTTATTTGAGTGGATCTCAGAGAGCGGT 1020
Query 1041 TATAAGGAAAGAATCAAAGAAAGAGGCCTTCTCATAACAGGATGGTCGCCTCAAATGCTT 1100
| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 1021 TTTAAGGAAAGAATCAAAGAGAGAGGCCTTCTCATAAGAGGATGGTCGCCTCAAATGCTT 1080
Query 1101 ATCCTTACACATCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCTACTCTT 1160
|||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1081 ATCCTTTCACACCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCGACTCTT 1140
Query 1161 GAAGGAATCACTTCAGGCGTTCCATTACTCACGTGGCCACTGTTTGGAGACCAATTCTGC 1220
|||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||
Sbjct 1141 GAAGGAATCACTTCAGGCGTTCCATTGCTCACTTGGCCATTATTTGGAGACCAATTCTGC 1200
Query 1221 AATGAGAAATTGGCGGTGCAGATACTAAAAGCCGGTGTGAGAGCTGGGGTTGAAGAGTCC 1280
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 1201 AATGAGAAATTGGCGGTGCAGATACTAAAAGCCGGTGTGAGAGCCGGGGTTGAGGAGTCC 1260
Query 1281 ATGAGATGGGGAGAAGAGGAGAAAATAGGAGTACTGGTGGATAAAGAAGGAGTAAAGAAG 1340
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1261 ATGAGATGGGGAGAAGAGGAGAACGTAGGAGTATTGGTGGATAAAGAAGGAGTAAAGAAG 1320
Query 1341 GCAGTGGAGGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAAAAGAGTGAAA 1400
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1321 GCAGTGGAAGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAAAAGAGTCAAA 1380
Query 1401 GAGCTTGGAGAATTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCCAACATC 1460
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1381 GAGCTTGGAGAATTAGCTCACAAGGCTGTGGAGGAAGGAGGCTCTTCTCATTCCAACATC 1440
Query 1461 ACATTCTTGCTACAAGACATAATGCAATTAGAACAACCCAAGAAATGATTGTAACTTTTC 1520
||||| |||||||||||||||| ||| ||| | || |||||||||||||||||| ||||
Sbjct 1441 ACATTATTGCTACAAGACATAACACAACTAGCAGAATCCAAGAAATGATTGTAACATTTC 1500
Query 1521 TTA 1523
|||
Sbjct 1501 TTA 1503
> Ahg482660 jgi|Araly1|482660|fgenesh2_kg.4__1720__AT2G36800.1
Length=1552
Score = 1166 bits (631), Expect = 0.0
Identities = 1214/1490 (81%), Gaps = 62/1490 (4%)
Strand=Plus/Plus
Query 53 TCCTCTTCATTTTGTTCTCTTCCCTTTCATGGCTCAAGGCCACATGA-TCCCAATGGTAG 111
||| ||||| |||||||| |||||||||||||||||||||||||||| |||| ||||| |
Sbjct 63 TCCACTTCACTTTGTTCTTTTCCCTTTCATGGCTCAAGGCCACATGATTCCC-ATGGTTG 121
Query 112 ATATTGCAAGGCTCCTGGCTCAGCGCGGGGTGACTATAACCATTGTCACTACACCTCAAA 171
|||||||||||||| ||||||||||||| |||| |||||| |||||||| || ||||| |
Sbjct 122 ATATTGCAAGGCTCTTGGCTCAGCGCGGTGTGATTATAACAATTGTCACGACGCCTCACA 181
Query 172 ACGCAGGC-CGGTTCAAGAACGTTCTTAGCCGGGCTATCCAATCCGGCTTGCCCATCAAT 230
| ||| || |||||||||| || || | ||| || || | || ||||||||||||||
Sbjct 182 ATGCA-GCGAGGTTCAAGAATGTCCTAAACCGAGCCATTGAGTCTGGCTTGCCCATCAAC 240
Query 231 CTCGTGCAAGTAAAGTTTCCATCTCAAGAATCGGGTTCACCGGAAGGACAGGAGAATTTG 290
|| |||||||| |||||||||| ||||||| | |||| | |||||||| |||||| |
Sbjct 241 CTAGTGCAAGTCAAGTTTCCATATCAAGAAGCTGGTTTGCAAGAAGGACAAGAGAATATC 300
Query 291 GACTTGCTC--GATTCATTGG-G-GGCTTCATTAACCTTCTTCAAAGCATTTAGCCTGCT 346
|| || ||| || || ||| | || | | || | ||||| ||||| ||| | ||||
Sbjct 301 GA-TT-CTCTTGAGACAATGGAGAGG-ATGA-TATCTTTCTTTAAAGCGGTTAACTTGCT 356
Query 347 CGAGGAACCAGTCGAGAAGCTC-TTGAAAGAGATTCAA-CCTAGGCCAAACTG-CATAAT 403
||| ||||||||| |||||||| ||| |||||| | || ||| | |||| ||| | ||||
Sbjct 357 CGAAGAACCAGTCCAGAAGCTCATTG-AAGAGA-TGAACCCTCGACCAAGCTGTC-TAAT 413
Query 404 CGCTGACATGTGTTTGCCTTATACAAACAGAAT-TGCCAAGAATCTT-GGTATACCAAAA 461
|||| | |||||||||||||||| || ||| | ||||||| || ||| |||||
Sbjct 414 TTCTGATTTCTGTTTGCCTTATACAAGCAAAATCT-CCAAGAA-GTTCAATATCCCAAAG 471
Query 462 ATCATCTTTCATGGCATGTGTTGCTTCAATCTTCTTTGTACGCACATAATGCAC-CAA-A 519
||| |||| ||||||||| ||||||| |||||| |||| | ||| | || ||| |
Sbjct 472 ATCCTCTTCCATGGCATGGGTTGCTTTTGTCTTCTGTGTATG--CATGTTTTACGCAAGA 529
Query 520 ACCACGAGTTCTTGGA-AACTATAGAGTCTGACAAGGAATACTTCCCCATTCCTAATTTC 578
||| ||| ||||||| || | || ||||||| ||||| || ||| | ||||| ||||
Sbjct 530 ACCGTGAGATCTTGGACAA-TTTAAAGTCTGATAAGGAGTATTTCACTGTTCCTTATTTT 588
Query 579 CCTGACAGAGTTGAGTTCACAAAATCTC-AGCTTCCAAT-GGTA-TTA-GTT---GCTGG 631
|||||||||||||| ||||||| | ||| || |||| | | | || ||| |||||
Sbjct 589 CCTGACAGAGTTGAATTCACAAGACCTCAAG-TTCCGGTAGAAACATATGTTCCAGCTGG 647
Query 632 AGATTGGAAAGACTTCCTT-GACGGAATGACAGAAGGGGATAACACTTCTTATGGTGTGA 690
||| |||||||| | ||| || || ||| ||||| | || | || |||||||||||||
Sbjct 648 AGACTGGAAAGAGAT-CTTCGATGGTATGGTAGAAGCGAATGAGACATCTTATGGTGTGA 706
Query 691 TTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTACAAGAAGGTTAAAG 750
| || ||| | ||| ||||||||||||| ||||||| | |||||||||| ||| ||| |
Sbjct 707 TAGTCAACTCATTTCAAGAGCTCGAGCCTGCTTATGCCAAAGACTACAAGGAGG-TAAGG 765
Query 751 -CGGGT-AAGATATGGAGCATCGGACCGGTTTCCTTGTGCAACAAGTTAGGAGAAGACCA 808
| ||| ||| ||||| ||| ||||| |||||||||||||||||| |||||| |||| |
Sbjct 766 TCCGGTAAAG-CATGGACCATTGGACCAGTTTCCTTGTGCAACAAGGTAGGAGCAGACAA 824
Query 809 AGCTGAGAGGGGAAACAAGGCGGACATTGATCAAGACGAGTGTATTAAATGGCTTGATTC 868
||| |||||||||||||| | |||||||||||||| ||||| |||||||||| |||||
Sbjct 825 AGCAGAGAGGGGAAACAAATCAGACATTGATCAAGATGAGTGCCTTAAATGGCTCGATTC 884
Query 869 TAAAGAAGAAGGG-TCGGTGCTATATGTTTGCCTTGGAAGTATATGCAATCTTCCTCTGT 927
||| ||| ||| | ||||| || ||||||||||||||||| ||||||||||||||||
Sbjct 885 TAAGGAA-CCGGGCACTGTGCTCTACGTTTGCCTTGGAAGTATCTGCAATCTTCCTCTGT 943
Query 928 CTCAGCTCAAAGAGCT-CGGCTTAGGCCTCGAGGAATCCCAAAGACCTTTCATTTGGGTC 986
|||||||||| ||||| ||| |||| ||||||||||| |||||||||||||| ||||||
Sbjct 944 CTCAGCTCAAGGAGCTGGGGC-TAGGGCTCGAGGAATCTCAAAGACCTTTCATCTGGGTC 1002
Query 987 ATAAGAGGTTGGGAGAAGTATAACGAGTTACTTGAATGGATCTCAGAGAGCGG-TTAT-A 1044
|||||||||||||| ||||| || |||||| |||| ||| |||| || ||||| || | |
Sbjct 1003 ATAAGAGGTTGGGAAAAGTACAAAGAGTTAGTTGAGTGGTTCTCGGAAAGCGGATT-TGA 1061
Query 1045 AGGAAAGAATCAAAGAAAGAGGCCTTCTCAT-AACAGGATGGTCGCCTCAAATGCTTATC 1103
| || ||||||||||| ||||| |||||||| || ||||||||| |||||||||||||||
Sbjct 1062 A-GATAGAATCAAAGACAGAGGACTTCTCATCAA-AGGATGGTCTCCTCAAATGCTTATC 1119
Query 1104 CTTACACATCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCTACTCTTGAA 1163
||| |||||| | | |||||||| ||||| || ||||| ||||||||||| ||||||||
Sbjct 1120 CTTTCACATCTTTCTGTTGGAGGGTTCTTAACGCATTGCGGATGGAACTCGACTCTTGAG 1179
Query 1164 GGAATCACTTCAGG-CGTTCC-ATTACTCACGTGGCCACTGTTTGGAGACCAATTCTGCA 1221
|| || || | || | | || || || || ||||| || |||| ||||||||||||||
Sbjct 1180 GGGATAACCGCTGGTC-TACCGCTT-CTTACATGGCCGCTATTTGCAGACCAATTCTGCA 1237
Query 1222 ATGAGAAATTGG-CGGTGCAGATACTAAAAGCCGGTGTGAGAGCTGGGGTTGAAG-AGTC 1279
| |||||| ||| | || ||| |||||||||||||||| ||| | ||||||| || || |
Sbjct 1238 ACGAGAAACTGGTC-GTTCAGGTACTAAAAGCCGGTGTAAGATCCGGGGTTG-AGCAG-C 1294
Query 1280 C-ATGAGATGGGGAGAAGAGGAGAAAATAGGAGTACTGGTGGATAAAGAAGGAGTAAAGA 1338
| |||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct 1295 CTATGAAATGGGGAGAAGAGGAGAAAATAGGAGTGTTGGTGGATAAAGAAGGAGTGAAGA 1354
Query 1339 AGGCAGTGGAGGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAAAAGAGTGA 1398
| |||||||| ||||| |||||||| ||| ||||||| || |||||||||| ||||| |
Sbjct 1355 ACGCAGTGGAAGAATTAATGGGTGAGAGTGATGATGCAAAAGAGAGAAGAAGAAGAGCCA 1414
Query 1399 AAGAGCTTGGAGAATTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCCAACA 1458
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1415 AAGAGCTTGGAGATTTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCTAACA 1474
Query 1459 TCACATTCTTGCTACAAGACATAATGCAATTAGAACAACCCAAGAAATGA 1508
|| |||||||||||||||||||||||||| ||| |||| |||| || |||
Sbjct 1475 TCTCATTCTTGCTACAAGACATAATGCAACTAGCACAATCCAATAATTGA 1524
> Ahg934312 jgi|Araly1|934312|scaffold_402300.1
Length=1535
Score = 1081 bits (585), Expect = 0.0
Identities = 1205/1500 (80%), Gaps = 59/1500 (4%)
Strand=Plus/Plus
Query 45 TTTCGTCCTCCTCTTCATTTTGTTCTCTTCCCTTTCATGGCTCAAGGCCACATGA-TCCC 103
|||| |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 48 TTTCATCCTTCTCTTCACTTTGTTCTCTTCCCTTTCATGGCTCAAGGCCACATGATTCCC 107
Query 104 AATGGTAGATATTGCAAGGCTCCTGGCTCAGCGCGGGGTGACTATAACCATTGTCACTAC 163
||| | |||||| ||||||| ||||||||||| | ||||| ||||| |||||||| ||
Sbjct 108 -ATGATTGATATTTCAAGGCTTTTGGCTCAGCGCAGTGTGACCATAACAATTGTCACGAC 166
Query 164 ACCTCAAAACGCAGGC-CGGTTCAAGAACGTTCTTAGCCGGGCTATCCAATCCGGCTTGC 222
||||| |||||| || |||| ||||| || || ||||| || || | || |||||||
Sbjct 167 GCCTCACAACGCA-GCAAGGTTTAAGAATGTCCTAAGCCGTGCAATAGAGTCGGGCTTGC 225
Query 223 CCATCAATCTCGTGCAAGTAAAGTTTCCATCTCAAGAATCGGGTTCACCGGAAGGACAGG 282
||||||| || ||||| || |||||||||| ||||||| | |||| | |||||||| |
Sbjct 226 CCATCAAACTGGTGCATGTGAAGTTTCCATATCAAGAAGCTGGTTTGCAAGAAGGACAAG 285
Query 283 AGAATTTGGACTT-GCTCGATTCATTGGGGGCTTCAT--TAACC-TTCTTCAAAGCATTT 338
||||| | || || | | || ||| || | || || | ||| || || ||||| |
Sbjct 286 AGAATATAGA-TTCGTTAGACTCA-AAGGAG-TTGATGGT-ACCTTTTTTTAAAGCGGTG 341
Query 339 AGCCTGCTCGAGGAACCAGTCGA-GAAGCTCTTGAAAGAGATTCAACCTAGGCCAAACTG 397
| |||| || || || ||| | ||||||| || ||||||| |||||| || | |||
Sbjct 342 AAAATGCTTGAAGAGCCGGTC-ACGAAGCTCATGGAAGAGATGAAACCTAAACCTAGCTG 400
Query 398 -CATAATCGCTGACAT-GTGTTTGCCTTATACAAACAGAATTGCCAAG-AATCTTGGTAT 454
| |||| |||| | ||||||||||||||||| || ||| |||||| ||| | |||
Sbjct 401 TC-TAATTTCTGA-TTGGTGTTTGCCTTATACAAGCATAATCGCCAAGAAAT-TCAATAT 457
Query 455 ACCAAAAATCA-TCTTT-CATGGCATGTGTTGCTTCAATCTTCTT-TGTACGCACATAAT 511
|||||| || | | ||| || |||||| |||| || |||| || |||| ||| | |
Sbjct 458 ACCAAAGAT-AGT-TTTCCACGGCATGGGTTGTTTTTGTCTT-TTGTGTATGCATGTTCT 514
Query 512 GCACCAAAACC-ACGAG-TTCTTGGAAACTATAGAGTCTGACAAGGAATACTTCCCCATT 569
| |||||||| | ||| | || || || | || |||| || || || || || | ||
Sbjct 515 ACGCCAAAACCTA-GAGATCCTAGGGAA-TGTAAAGTCAGATAATGAGTATTTACTGGTT 572
Query 570 CCTAATTTCCCTGACAGAGTTGAGTTCACAAAATCTCAGCTTCCAATGGTATTAGTTGC- 628
||| ||| ||||| | |||||| || ||||| |||| ||||| || | | |||
Sbjct 573 CCTTGTTTTCCTGATAAAGTTGAATTTACAAAGCCTCAACTTCCTGTGAAAGCAAATGCA 632
Query 629 --TGGAGATTGGAAAGACTTCCTTGACGGAATGACAGAAG-GGGATAACACTTCTTATGG 685
||||||||||||||| || | |||| |||| | ||| | || |||| || |||||
Sbjct 633 AGTGGAGATTGGAAAGAGATCATGGACGAAATGGTAAAAGCAGAAT-ACACATCATATGG 691
Query 686 TGTGATTGTTAACACGTTTGAAGAGCTCGAGCCAGCTTATGTTAGAGACTAC-AAGAAGG 744
|||| | || ||||| || |||||| | ||||| |||||||| | ||||||| ||| |||
Sbjct 692 TGTGGTAGTCAACACATTCGAAGAGTTGGAGCCTGCTTATGTCAAAGACTACAAAG-AGG 750
Query 745 TTAA-AGC-GGGTAAGATATGGAGCATCGGACCGGTTTCCTTGTGCAACAAGTTAGGAGA 802
|| || || ||| ||||| ||| ||||| |||||||||||||||||| ||||||
Sbjct 751 -CAAGGGCTGGAAAAG-TATGGTCCATTGGACCAGTTTCCTTGTGCAACAAGGTAGGAGC 808
Query 803 AGACCAAGCTGAGAGGGGAAACAAGGCGGAC-ATTGATCAAGACGAGTGTATTAAATGGC 861
|||| |||| |||||||| ||||| |||| | ||||||||||| |||||| |||||||||
Sbjct 809 AGACAAAGCAGAGAGGGGTAACAAAGCGG-CTATTGATCAAGATGAGTGTCTTAAATGGC 867
Query 862 TTGATTCTAAAGAAGAAGGGTCGGTGCTATATGTTTGCCTTGGAAGTATATGCAATCTTC 921
||||||||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||
Sbjct 868 TTGATTCTAAAGAAGAAGGTTCGGTGCTCTATGCTTGCCTTGGAAGTATCTGCAATCTTC 927
Query 922 CTCTGTCTCAGCTCAAAGAGCT-CGGCTTAGGCCTCGAGGAATCCCAAAGACCTTTCATT 980
|| || |||||||||| ||| | ||| ||||||| |||||||||| ||||||||| |||
Sbjct 928 CTTTGGCTCAGCTCAAGGAGTTGGGGC-TAGGCCTTGAGGAATCCCGAAGACCTTTTATT 986
Query 981 TGGGTCATAAGAGGTTGGGAGAAGTATAACGAGTTACT-TGAATGGATCTCAGAGAGCGG 1039
|||||||||||||||||||| ||||| || || || | ||| ||||| | ||||||||
Sbjct 987 TGGGTCATAAGAGGTTGGGAAAAGTACAATGAACTA-TCTGAGTGGATGTTGGAGAGCGG 1045
Query 1040 TTAT-AAGGAAAGAATCAAAGAAAGAGGCCTTCTCATAACAGGATGGTCGCCTCAAATGC 1098
|| | || |||||||||||||| ||||| |||||||| | ||| ||| | || ||| | |
Sbjct 1046 TTTTCAA-GAAAGAATCAAAGAGAGAGGACTTCTCATTAGAGGGTGGGCACCACAAGTCC 1104
Query 1099 TTATCCTTACACATCCTGCCGTTGGAGGATTCTTGACACATTGTGGATGGAACTCTACTC 1158
|||||||| |||||||| |||||||||||||||||||||| ||||||||||| || ||||
Sbjct 1105 TTATCCTTTCACATCCTTCCGTTGGAGGATTCTTGACACACTGTGGATGGAATTCGACTC 1164
Query 1159 TTGAAGGAATCACTTCAGGCGTTCCA-TTACTCACGTGGCCACTGTTTGGAGACCAATTC 1217
| ||||||||||| || ||| ||||| || ||||| ||||| ||||||| ||||||||||
Sbjct 1165 TCGAAGGAATCACCTCGGGCATTCCACTT-CTCACATGGCCGCTGTTTGCAGACCAATTC 1223
Query 1218 TGCAATGAGAAA-TTGGCGGTGCAGATACTAAAAGCCGGTGTGAGAGCTGGGGTTGAAG- 1275
|| || |||||| | | | |||||| ||||||||||||||| ||||| || |||| ||
Sbjct 1224 TGTAACGAGAAACTAGTC-GTGCAGGTACTAAAAGCCGGTGCAAGAGCCGGAGTTG-AGC 1281
Query 1276 AGTCC-ATGAGATGGGGAGAAGAGGAGAAAATAGGAGTACTGGTGGATAAAGAAGGAGTA 1334
|| || |||| || |||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1282 AG-CCTATGAAATCGGGAGAAGAGGAGAAAATAGGAGTGTTAGTGGATAAAGAAGGAGTG 1340
Query 1335 AAGAAGGCAGTGGAGGAATTGATGGGTGATAGTAATGATGCTAAGGAGAGAAGAAAAAGA 1394
||||| |||||||| ||||| |||||| ||||| ||||||| || ||||| |||| ||||
Sbjct 1341 AAGAAAGCAGTGGAAGAATTAATGGGTAATAGTGATGATGCAAAAGAGAGGAGAAGAAGA 1400
Query 1395 GTGAAAGAGCTTGGAGAATTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCC 1454
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1401 GTCAAAGAGCTTGGAGAATTAGCTCACAAGGCTGTGGAAGAAGGAGGCTCTTCTCATTCT 1460
Query 1455 AACATCACATTCTTGCTACAAGACATAATGCAATTAGAACAAC-CCAAGAAATGATTGTA 1513
|||||| |||||||||||||||||||| ||||| ||| || | ||||||| ||||||||
Sbjct 1461 AACATCTCATTCTTGCTACAAGACATAGTGCAACTAGTGCA-CTCCAAGAATTGATTGTA 1519
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59077969995
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5