BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G36910.1
Length=4279
Score E
Sequences producing significant alignments: (Bits) Value
Ahg934330 jgi|Araly1|934330|scaffold_402318.1 6403 0.0
Ahg470213 jgi|Araly1|470213|fgenesh2_kg.1__167__AT1G02530.1 71.3 6e-11
Ahg473002 jgi|Araly1|473002|fgenesh2_kg.1__2956__AT1G28010.1 63.9 9e-09
> Ahg934330 jgi|Araly1|934330|scaffold_402318.1
Length=4061
Score = 6403 bits (3467), Expect = 0.0
Identities = 3873/4072 (95%), Gaps = 15/4072 (0%)
Strand=Plus/Plus
Query 129 TCCAGAGAAACTCACCGGAAATGGATAATGACGGTGGTGCTCCTCCTCCTCCGCCGACAC 188
||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 1 TCCGGAGAAACTCACCGGAAATGGATAATGACGGTGGTGCTCCTCCTCCGCCGCCG--AC 58
Query 189 TAGTGGTGGAAGAGCCTAAGAAAGCAGAGATTCGTGGAGTTGCTTTTAAAGAGCTATTCA 248
||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 59 -AGTAGTGGAGGAGCCTAAGAAAGCAGAGATTCGTGGAGTTGCTTTTAAAGAGCTTTTCA 117
Query 249 GATTCGCCGACGGATTAGATTATGTATTGATGGGAATTGGCTCTGTTGGTGCTTTTGTCC 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 118 GATTCGCCGACGGATTAGATTATGTATTGATGGGAATTGGCTCTGTTGGTGCTTTTGTCC 177
Query 309 ATGGCTGCTCTTTACCTCTGTTTCTTCGATTCTTCGCCGATCTTGTTAATTCCTTTGGTT 368
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 178 ATGGTTGCTCTTTACCTCTGTTTCTTCGATTCTTCGCCGATCTTGTTAATTCCTTTGGTT 237
Query 369 CTAATTCTAATAACGTTGAAAAGATGATGGAAGAAGTTCTCAAGTATGCGCTTTACTTTT 428
||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 238 CTAATGCTAATAACGTTGACAAGATGATGGAAGAAGTTCTAAAGTATGCGCTTTACTTTT 297
Query 429 TAGTGGTTGGTGCTGCAATCTGGGCTTCCTCTTGGGCAGAGATTTCGTGTTGGATGTGGA 488
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 298 TAGTGGTTGGTGCTGCAATCTGGGCTTCTTCTTGGGCAGAGATTTCGTGTTGGATGTGGA 357
Query 489 GTGGAGAGAGACAAACAACGAAGATGAGGATTAAGTATTTAGAAGCAGCTTTGAATCAAG 548
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 358 GTGGAGAGAGACAAACAACGAAGATGAGGATAAAGTATTTAGAAGCAGCTTTGAATCAAG 417
Query 549 ACATTCAGTTCTTTGATACAGAAGTTCGAACTTCAGATGTTGTCTTCGCCATTAACACCG 608
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 418 ACATTCAGTTCTTTGATACAGAGGTTCGAACTTCAGATGTTGTCTTCGCCATTAACACCG 477
Query 609 ACGCTGTTATGGTTCAAGACGCCATTAGTGAGAAACTTGGTAATTTCATCCATTACATGG 668
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 478 ACGCTGTTATGGTTCAAGACGCCATTAGTGAGAAACTTGGTAATTTTATCCATTACATGG 537
Query 669 CGACTTTTGTTTCTGGATTCATCGTGGGTTTCACTGCGGTGTGGCAACTAGCTTTAGTGA 728
|||||||||| ||||||||||||||||||||||| |||||||||||||| || |||||||
Sbjct 538 CGACTTTTGTGTCTGGATTCATCGTGGGTTTCACGGCGGTGTGGCAACTGGCGTTAGTGA 597
Query 729 CTCTCGCGGTGGTTCCGTTGATTGCTGTGATCGGAGGAATTCACACCACTACTCTCTCTA 788
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 598 CTCTTGCGGTGGTTCCGTTGATAGCTGTGATCGGAGGAATTCACACCACTACTCTCTC-A 656
Query 789 AA-CTATCTAATAAGAGTCAAGAGTCTCTTTCACAAGCTGGTAATATCGTCGAACAGACA 847
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 AAGCTATCTAATAAGAGTCAAGAGTCTCTTTCACAAGCTGGTAATATCGTCGAACAGACA 716
Query 848 GTGGTACAAATCAGGGTAGTGATGGCTTTCGTTGGAGAATCAAGAGCTTCACAAGCTTAT 907
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 717 GTGGTGCAAATCAGGGTAGTGATGGCTTTTGTTGGAGAATCAAGAGCTTCACAAGCTTAT 776
Query 908 TCATCAGCTTTGAAGATTGCTCAGAAGCTTGGTTACAAAACAGGTTTAGCTAAAGGAATG 967
|| |||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 777 TCCTCAGCTTTAAAGATTGCTCAGAAACTTGGTTACAAGACAGGTTTAGCTAAAGGAATG 836
Query 968 GGACTTGGTGCTACATACT-TCGTTGTCTTTTGTTGTTACGCTCTCTTGCTTTGGTACGG 1026
|||||||||||||| || | |||||||||| ||||| |||||||||||||||||||||||
Sbjct 837 GGACTTGGTGCTACTTA-TATCGTTGTCTTCTGTTGCTACGCTCTCTTGCTTTGGTACGG 895
Query 1027 TGGTTATCTAGTTCGCCACCATTTGACCAACGGTGGTCTCGCTATTGCCACAATGTTCGC 1086
|| || || ||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct 896 AGGCTACCTCGTTCGCCACCATTTGACTAACGGTGGTCTTGCCATTGCCACAATGTTCGC 955
Query 1087 CGTTATGATTGGTGGATTGGCATTGGGACAATCAGCACCGAGCATGGCTGCATTTGCCAA 1146
||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 956 CGTCATGATCGGTGGATTGGCATTGGGACAGTCAGCACCGAGCATGGCTGCATTTGCCAA 1015
Query 1147 AGCAAAGGTTGCTGCTGCAAAGATCTTTAGAATCATTGATCACAAACCAACGATAGAGCG 1206
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1016 AGCAAAGGTTGCTGCTGCAAAGATCTTTAGAATTATTGATCACAAACCTACGATAGAGCG 1075
Query 1207 TAACAGCGAGTCCGGTGTGGAGTTAGACTCAGTCACGGGTCTTGTCGAGCTTAAAAATGT 1266
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1076 TAATAGCGAGTCCGGTGTGGAGTTAGACTCGGTCACGGGTCTTGTCGAGCTTAAAAACGT 1135
Query 1267 GGACTTTTCGTATCCGTCAAGGCCAGATGTTAAGATTCTTAACAACTTCTGCCTCTCTGT 1326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GGACTTTTCGTATCCGTCAAGGCCAGATGTTAAGATTCTTAACAACTTCTGCCTCTCTGT 1195
Query 1327 TCCTGCTGGGAAGACCATTGCTTTGGTTGGGAGCAGTGGTTCAGGAAAAAGCACAGTCGT 1386
||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1196 TCCCGCTGGGAAGACCATTGCTTTGGTTGGGAGCAGCGGTTCAGGGAAAAGCACAGTCGT 1255
Query 1387 TTCGCTTATAGAGCGGTTTTACGACCCGAACTCAGGACAAGTTTTACTAGATGGGCAAGA 1446
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1256 TTCGCTTATAGAGCGGTTTTACGATCCGAACTCAGGACAAGTTTTACTAGATGGGCAGGA 1315
Query 1447 CCTGAAGACGCTGAAACTGAGATGGTTAAGGCAACAGATAGGGCTAGTGAGTCAAGAACC 1506
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 CCTGAAGACCCTGAAATTGAGATGGTTAAGGCAACAGATAGGGCTAGTGAGTCAAGAACC 1375
Query 1507 TGCATTATTCGCCACTTCTATCAAGGAGAATATACTCTTAGGCCGTCCTGACGCAGATCA 1566
|||| |||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct 1376 TGCACTATTCGCCACTTCTATTAAAGAGAATATACTCTTAGGCCGTCCCGACGCAGATCA 1435
Query 1567 AGTCGAGATAGAGGAGGCTGCTCGAGTCGCAAATGCTCATTCCTTTATCATCAAACTACC 1626
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1436 AGTCGAGATAGAGGAGGCAGCTCGAGTCGCAAATGCTCATTCTTTTATCATCAAACTACC 1495
Query 1627 TGATGGCTTCGACACACAGGTTGGGGAGAGAGGATTGCAGCTGTCTGGTGGGCAGAAGCA 1686
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 1496 TGATGGCTTCGACACACAGGTTGGGGAGAGAGGATTGCAGCTATCAGGTGGGCAGAAGCA 1555
Query 1687 AAGAATAGCGATAGCAAGAGCGATGTTGAAGAACCCGGCGATACTTCTATTAGATGAGGC 1746
|||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1556 AAGAATTGCGATAGCAAGAGCGATGTTGAAGAACCCGGCAATACTTCTTTTAGATGAGGC 1615
Query 1747 GACGAGTGCATTGGATTCTGAATCAGAGAAGCTTGTACAAGAGGCTTTGGATCGTTTCAT 1806
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1616 GACGAGTGCGTTGGATTCTGAATCAGAGAAGCTTGTACAAGAAGCTTTGGATCGTTTCAT 1675
Query 1807 GATTGGAAGGACTACTCTCATCATTGCTCATCGCCTTTCTACCATTCGAAAAGCTGACCT 1866
|||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct 1676 GATTGGAAGGACTACTCTCATCATCGCTCATCGTCTTTCTACCATTCGAAAAGCAGACCT 1735
Query 1867 TGTTGCTGTGCTACAGCAAGGAAGTGTCTCTGAGATTGGAACGCATGATGAGCTTTTTTC 1926
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1736 TGTTGCTGTGCTTCAGCAAGGAAGTGTCTCTGAGATTGGAACGCATGACGAGCTTTTTTC 1795
Query 1927 CAAGGGAGAAAATGGAGTCTATGCTAAGCTAATTAAAATGCAAGAAGCAGCTCACGAAAC 1986
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 CAAGGGAGAAAACGGAGTCTATGCTAAGCTAATTAAAATGCAAGAAGCAGCTCACGAAAC 1855
Query 1987 CGCCATGAGCAATGCAAGAAAGAGTAGCGCAAGACCGTCGAGTGCTAGAAACTCGGTTAG 2046
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1856 CGCCATGAGCAATGCAAGAAAGAGTAGCGCAAGACCGTCAAGTGCTAGAAACTCGGTTAG 1915
Query 2047 CTCGCCAATAATGACTCGGAATTCGTCGTATGGAAGATCACCTTATTCACGGAGACTATC 2106
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 1916 CTCGCCAATAATGACTCGGAATTCGTCATATGGAAGATCACCTTATTCACGGAGACTCTC 1975
Query 2107 CGATTTCTCAACTTCTGATTTTAGCCTCTCCATTGACGCTTCGTCCTACCCAAACTATAG 2166
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1976 GGATTTTTCAACTTCTGATTTTAGCCTCTCCATTGACGCTTTTTCCTACCCAAACTATAG 2035
Query 2167 AAACGAGAAGCTGGCCTTCAAGGATCAAGCCAATTCATTCTGGCGACTAGCTAAAATGAA 2226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2036 AAACGAGAAGCTGGCCTTCAAGGATCAAGCCAATTCATTCTGGCGACTAGCTAAAATGAA 2095
Query 2227 CTCTCCAGAGTGGAAATACGCTTTGCTCGGTTCAGTAGGCTCTGTCATTTGTGGCTCCCT 2286
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2096 CTCTCCAGAGTGGAAATACGCTTTGCTCGGTTCGGTAGGCTCTGTCATTTGTGGCTCCCT 2155
Query 2287 TAGTGCATTCTTCGCATATGTCCTCAGTGCAGTCTTAAGCGTCTACTACAACCCGGACCA 2346
|| || ||||| || ||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 2156 CAGCGCGTTCTTTGCGTATGTCCTCAGCGCAGTCTTAAGCATCTACTACAACCCGGACCA 2215
Query 2347 CGAATACATGATCAAACAGATTGATAAGTACTGTTATCTCTTAATCGGTCTCTCTTCCGC 2406
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2216 TGAATACATGATCAAACAGATTGATAAGTACTGTTATCTCTTAATCGGTCTCTCTTCCGC 2275
Query 2407 AGCACTTGTCTTCAACACGCTCCAGCATTCTTTCTGGGACATTGTGGGTGAGAATCTGAC 2466
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||
Sbjct 2276 CGCACTTGTCTTCAACACACTCCAGCATTCTTTTTGGGACATTGTGGGTGAGAATCTAAC 2335
Query 2467 CAAGAGAGTCCGTGAGAAGATGCTGAGCGCTGTACTCAAGAATGAGATGGCTTGGTTTGA 2526
||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2336 CAAGAGAGTCCGTGAAAAGATGCTCAGCGCCGTACTCAAGAATGAGATGGCTTGGTTTGA 2395
Query 2527 TCAAGAGGAGAACGAAAGTGCAAGAATCGCAGCAAGATTAGCTCTTGATGCTAATAATGT 2586
|||||||||||| |||||||||||||| |||||| ||||||| |||||||| ||||||||
Sbjct 2396 TCAAGAGGAGAATGAAAGTGCAAGAATTGCAGCACGATTAGCCCTTGATGCCAATAATGT 2455
Query 2587 GAGATCTGCGATAGGAGATAGAATATCGGTTATTGTGCAGAACACAGCACTGATGCTTGT 2646
|||||| || |||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 2456 GAGATCAGCCATAGGAGATAGAATCTCCGTTATTGTGCAGAACACAGCACTGATGCTAGT 2515
Query 2647 TGCTTGCACTGCCGGGTTTGTTCTACAATGGAGACTCGCACTTGTCCTTGTCGCAGTCTT 2706
||||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 2516 AGCTTGCACTGCTGGGTTTGTTCTACAGTGGAGGCTTGCACTTGTCCTTGTCGCAGTCTT 2575
Query 2707 CCCCGTAGTTGTTGCTGCAACTGTCTTACAGAAAATGTTCATGACTGGTTTCTCGGGAGA 2766
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 2576 CCCCGTAGTTGTTGCTGCAACTGTCTTACAGAAAATGTTTATGACTGGATTCTCGGGAGA 2635
Query 2767 CCTGGAAGCGGCACATGCCAAGGGAACGCAGCTTGCTGGTGAAGCCATAGCTAATGTCAG 2826
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2636 CCTGGAAGCGGCGCACGCCAAGGGAACGCAGCTTGCTGGTGAAGCCATAGCTAATGTCAG 2695
Query 2827 GACAGTTGCTGCATTTAACTCGGAGGCAAAGATTGTCCGTCTCTACACTGCAAACCTCGA 2886
||||||||| || || || ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2696 GACAGTTGCAGCCTTCAATTCGGAGGCAAAGATTGTTCGTCTCTACACTGCAAACCTAGA 2755
Query 2887 ACCACCATTGAAACGATGCTTCTGGAAAGGACAGATCGCTGGAAGTGGTTATGGTGTAGC 2946
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2756 ACCACCATTGAAACGATGCTTCTGGAAAGGACAAATCGCTGGAAGTGGCTATGGTGTAGC 2815
Query 2947 TCAGTTCTGTCTTTATGCATCTTATGCTCTCGGGCTATGGTACGCATCATGGCTTGTGAA 3006
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2816 TCAGTTCTGTCTTTACGCATCTTACGCTCTCGGGCTATGGTACGCATCATGGCTTGTGAA 2875
Query 3007 ACACGGCATCTCTGACTTCTCCAAAACCATAAGAGTCTTCATGGTTCTGATGGTCTCAGC 3066
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2876 ACATGGCATCTCTGACTTCTCCAAAACAATAAGAGTCTTCATGGTTCTGATGGTCTCAGC 2935
Query 3067 CAATGGTGCAGCAGAGACACTCACACTGGCTCCTGATTTCATCAAAGGTGGTCAAGCTAT 3126
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2936 CAATGGTGCTGCAGAGACGCTCACACTGGCTCCTGATTTCATTAAAGGTGGTCAAGCAAT 2995
Query 3127 GCGGTCTGTTTTCGAACTTCTTGACCGGAAAACCGAGATTGAACCTGATGATCCTGATAC 3186
||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2996 GCGCTCGGTTTTCGAACTTCTTGACCGGAAAACTGAGATTGAACCCGATGATCCTGATAC 3055
Query 3187 CACCCCGGTCCCAGACCGGTTACGTGGTGAAGTCGAGCTCAAACATATCGATTTCTCTTA 3246
|||||| ||||||||||||||||| || ||||| || |||||||| || |||||||||||
Sbjct 3056 CACCCCAGTCCCAGACCGGTTACGCGGCGAAGTTGAACTCAAACACATTGATTTCTCTTA 3115
Query 3247 CCCTTCAAGGCCAGACATCCAGATTTTCCGTGACCTTAGCCTTCGTGCTAGAGCTGGCAA 3306
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3116 CCCTTCAAGACCAGACATCCAGATTTTCCGTGACCTTAGCCTTCGTGCTAGAGCTGGCAA 3175
Query 3307 AACCCTAGCTCTTGTGGGTCCAAGCGGGTGCGGAAAAAGCTCAGTTATCTCCCTCATCCA 3366
|| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 3176 GACTCTAGCTCTTGTGGGTCCAAGCGGGTGTGGAAAAAGCTCGGTTATCTCCCTCATCCA 3235
Query 3367 GAGATTCTACGAACCTTCCTCAGGCCGAGTCATGATCGACGGGAAAGACATAAGGAAATA 3426
||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 3236 GAGGTTCTACGAACCGTCCTCAGGTCGAGTCATGATCGATGGGAAAGACATAAGGAAATA 3295
Query 3427 CAACCTGAAAGCCATAAGGAAACACATAGCCATAGTCCCTCAAGAGCCGTGCTTGTTCGG 3486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3296 CAACCTGAAAGCCATAAGGAAACACATAGCCATAGTCCCTCAAGAGCCGTGCTTGTTCGG 3355
Query 3487 AACTACCATTTACGAAAACATTGCATATGGACATGAATGTGCGACCGAAGCAGAGATCAT 3546
||| ||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 3356 AACCACCATTTACGAAAACATTGCATACGGACACGAGTGTGCGACCGAAGCAGAGATCAT 3415
Query 3547 ACAAGCCGCGACTCTAGCCAGTGCGCACAAATTCATATCCGCGCTACCAGAAGGTTACAA 3606
||||| |||||||||||||| || ||||| ||||||||||| ||||| |||||||||||
Sbjct 3416 TCAAGCAGCGACTCTAGCCAGCGCCCACAAGTTCATATCCGCACTACCCGAAGGTTACAA 3475
Query 3607 AACGTATGTTGGCGAGAGAGGCGTTCAGCTCTCGGGAGGACAGAAACAGAGGATCGCGAT 3666
|||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3476 GACGTATGTCGGAGAGAGAGGCGTTCAGCTCTCGGGAGGACAGAAACAGAGGATCGCAAT 3535
Query 3667 CGCACGTGCCCTCGTGAGGAAAGCAGAGATCATGCTGCTTGACGAGGCTACAAGCGCTCT 3726
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 3536 CGCACGTGCCCTCGTGAGAAAAGCAGAGATCATGCTGCTCGACGAGGCTACAAGCGCTCT 3595
Query 3727 TGATGCAGAGTCCGAGAGATCAGTCCAAGAAGCATTAGACCAGGCTTGCTCTGGTAGAAC 3786
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3596 TGATGCAGAGTCCGAGAGATCAGTCCAAGAAGCATTGGACCAGGCTTGCTCTGGTAGAAC 3655
Query 3787 ATCAATAGTCGTGGCTCATAGGCTATCTACAATCAGGAACGCACACGTGATCGCTGTCAT 3846
||| || |||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 3656 ATCGATTGTCGTGGCTCATAGGCTATCTACAATCAGGAACGCACATGTGATCGCGGTGAT 3715
Query 3847 CGATGATGGAAAAGTGGCTGAACAAGGATCGCATTCGCATCTTCTCAAGAACCATCCTGA 3906
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 3716 CGATGATGGAAAAGTCGCAGAACAAGGATCGCATTCGCATCTTCTCAAGAACCATCCTGA 3775
Query 3907 TGGAATCTACGCGCGAATGATACAGTTGCAAAGATTTACGCATACACAAGTGATTGGTAT 3966
||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||
Sbjct 3776 TGGAATCTACGCGCGGATGATACAGTTGCAGAGATTTACGCATACTCAGGTGATTGGTAT 3835
Query 3967 GACGTCAGGTTCAAGTTCTAGGGTTAAGGAAGATGATGCTTAGTACTTACTACTTTGGTC 4026
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3836 GACATCAGGTTCAAGTTCTAGGGTTAAAGAAGATGATGCTTAGTACTTACTACTTTGGTC 3895
Query 4027 AT-ATagaagaaaaaagaaggag-agtaaaaaacaacaaacaccagaagatgtttctgat 4084
|| ||||||||| ||||||| || | |||||| |||||||| |||||||||| ||||||
Sbjct 3896 ATTATAGAAGAAGAAAGAAG-AGTAAAAAAAAAAAACAAACATCAGAAGATGTCTCTGAT 3954
Query 4085 aaaaaacTCTACGAACTCATCAttttctctttttttctttctgttttgattttggggtta 4144
||||| |||||||||||||| ||| |||||||||| |||||||||||||||||||||||
Sbjct 3955 AAAAA-CTCTACGAACTCAT--TTT-CTCTTTTTTT-TTTCTGTTTTGATTTTGGGGTTA 4009
Query 4145 cttatttttGGAACTACGTTTCAGATTTGATGGTATAGTATTATTATTGTGT 4196
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4010 CTTATTTTTGGAACTACGTTTCAGATTTGATGGTATAGTATTATTATTGTGT 4061
> Ahg470213 jgi|Araly1|470213|fgenesh2_kg.1__167__AT1G02530.1
Length=3938
Score = 71.3 bits (38), Expect = 6e-11
Identities = 106/138 (77%), Gaps = 8/138 (6%)
Strand=Plus/Plus
Query 3632 CAGCTCTCGGGAGGACAGAAACAGAGGATCGCGATCGC-ACGTGCCCT-CGTGAGGAAA- 3688
||||||||||||||||||||||||||||| ||||| || | | || | | | | ||
Sbjct 1557 CAGCTCTCGGGAGGACAGAAACAGAGGATAGCGATTGCGA-GAGCTATTCTTAAAGATCC 1615
Query 3689 GCAGAGATCATGCTGCTTGACGAGGCTACAAGCGCTCTTGATGCAGAGTCCGAGAGA-TC 3747
|| | ||| ||||||| || || || |||||||| || |||||||| ||||| ||| |
Sbjct 1616 GC-G-GATTTTGCTGCTGGATGAAGCAACAAGCGCGCTCGATGCAGAATCCGAAAGAGTT 1673
Query 3748 AGTCCAAGAAGCATTAGA 3765
|| ||||| || |||||
Sbjct 1674 -GTTCAAGAGGCTTTAGA 1690
> Ahg473002 jgi|Araly1|473002|fgenesh2_kg.1__2956__AT1G28010.1
Length=3878
Score = 63.9 bits (34), Expect = 9e-09
Identities = 117/155 (75%), Gaps = 13/155 (8%)
Strand=Plus/Plus
Query 3599 GGTTACAAAACGT-ATGTTGGCG-AGAGAGGCGTTCAGCTCTCGGGAGGACAGAAACAGA 3656
|||||||| || | | ||||| | || |||| ||||||||||||||||||||||||||
Sbjct 1495 GGTTACAATAC-TCAGGTTGGAGAAG-GAGGAACTCAGCTCTCGGGAGGACAGAAACAGA 1552
Query 3657 GGATCGCGATCGCACGTGCCCT-CGTGAGGAAAGC-AGAGATCATG-CTGCTT-GACGAG 3712
|||| || || || || || | | | || ||| | | |||| || || || || ||
Sbjct 1553 GGATTGCAATTGCTCGAGCGGTTC-TAAG-AAATCCAAAGAT-ATTACTT-TTAGATGAA 1608
Query 3713 GCTACAAGCGCTCTTGATGCAGAGTCCGAGA-GAT 3746
|| || |||||||||||||| || || |||| |||
Sbjct 1609 GCAACGAGCGCTCTTGATGCCGAATCAGAGAAGAT 1643
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 161820800396
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5