BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G37030.1 Length=375 Score E Sequences producing significant alignments: (Bits) Value Ahg482688 jgi|Araly1|482688|fgenesh2_kg.4__1748__AT2G37030.1 627 2e-179 > Ahg482688 jgi|Araly1|482688|fgenesh2_kg.4__1748__AT2G37030.1 Length=375 Score = 627 bits (339), Expect = 2e-179 Identities = 363/375 (97%), Gaps = 0/375 (0%) Strand=Plus/Plus Query 1 ATGAAGAGCAAGTTCATTAAGTCCTGTGAAAAGAAACTGAAAAAGATGACGAGCAAAGTC 60 |||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||| Sbjct 1 ATGAAGAGCAAGTTCATTAAGTCCTGCGAAAAGAAACTGAAAAAGATGACAACCAAAGTC 60 Query 61 ATAATACCTTGTGCGTCTTGCGAGTCATGCTACGAGAGAATTTGCTGGGCATTCAAGAAG 120 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 61 ATAATACCTTGTGCGTCTTGCGAGGCATGCTACGATAGAATTTGCTGGGCATTCAAGAAG 120 Query 121 GAAGCTGAGGTGATTCCAAGAGATGTCCCTAAGGGACATTTGGTTGTCTATGTGGGTGAA 180 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 121 GAAGCTGAGGTGATACCAAGAGATGTCCCTAAGGGACACTTGGTTGTCTATGTGGGTGAA 180 Query 181 GAGTACAAGAGGTTTGTGATAAATATCAACCTGCTTAAACACCCACTCTTCCAAGCATTG 240 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 181 GAGTACAAGAGGTTTGTGATAAAGATCAACTTGCTTAAACACCCACTCTTCCAAGCATTG 240 Query 241 CTGGATCAAGCACAGGATGCTTACGGTTTCAGTGCTGACTCCAGACTATGGATTCCATGC 300 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTGGATCAAGCACAAGATGCTTACGGTTTCAGTGCTGACTCCAGACTATGGATTCCATGC 300 Query 301 AATGAGAGTACTTTCCTCGATGTTGTCCGTTGCGCTGGTGCACCCCAGCATCAGAATAAC 360 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 301 AATGAGAGTACTTTCCTCGATGTTGTCCGTTGCGCTGGTGCTCCTCAGCATCAGAATAAC 360 Query 361 TGCATATGTATCTAG 375 ||||||||||||||| Sbjct 361 TGCATATGTATCTAG 375 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 13392611739 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5