BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G37040.1
Length=2530
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482690 jgi|Araly1|482690|fgenesh2_kg.4__1750__AT2G37040.1 3925 0.0
Ahg938226 jgi|Araly1|938226|scaffold_502417.1 2095 0.0
Ahg887428 jgi|Araly1|887428|Al_scaffold_0693_1 725 0.0
Ahg487203 jgi|Araly1|487203|fgenesh2_kg.6__337__AT5G04230.1 459 6e-128
> Ahg482690 jgi|Araly1|482690|fgenesh2_kg.4__1750__AT2G37040.1
Length=2436
Score = 3925 bits (2125), Expect = 0.0
Identities = 2306/2394 (96%), Gaps = 9/2394 (0%)
Strand=Plus/Plus
Query 104 TAAAACTAAGA-TCAAAAGTCTAAATGGAGATTAACGGGGCACACAAGAGC-AACGGAGG 161
||||||||||| ||||||||| |||||||||||||||| |||||||| ||| ||||||||
Sbjct 29 TAAAACTAAGATTCAAAAGTCAAAATGGAGATTAACGGAGCACACAA-AGCTAACGGAGG 87
Query 162 AGGAGTGGACGCTATGTTATGCGGCGGAGACATCAAGACAAAGAACATGGTGATCAACGC 221
| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 88 ATCAATCGATGCTATGTTATGCGGCGGAGACATCAAGACAAAGAACATGGTGATCAACGC 147
Query 222 GGAGGATCCTCTCAACTGGGGAGCTGCAGCGGAGCAAATGAAAGGTAGCCATTTGGATGA 281
||| ||||||||||||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct 148 GGAAGATCCTCTCAACTGGGGAGCTGCGGCTGAGCAAATGAAAGGAAGCCATTTGGATGA 207
Query 282 AGTGAAGAGAATGGTTGCTGAGTTTAGGAAGCCAGTTGTGAATCTTGGTGGTGAGACTCT 341
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 208 AGTGAAGAGAATGGTTGCTGAGTTTAGGAAGCCAGTGGTGAATCTTGGAGGTGAGACTCT 267
Query 342 GACCATTGGACAAGTGGCTGCGATCTCAACTATTGGTAACAGTGTGAAGGTGGAGCTATC 401
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||
Sbjct 268 GACCATTGGACAAGTGGCTGCGATCTCAACCATTGGTAACGGTGTGAAGGTGGAGCTGTC 327
Query 402 GGAGACAGCTAGAGCCGGTGTGAATGCTAGTAGTGATTGGGTTATGGAGAGTATGAACAA 461
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 328 GGAGACCGCTAGAGCCGGTGTGAATGCGAGTAGTGATTGGGTTATGGAGAGTATGAACAA 387
Query 462 AGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTACTTCTCATCGGAGAACCAA 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 388 AGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTACTTCTCATCGGAGAACCAA 447
Query 522 AAACGGTGTCGCACTTCAGAAGGAACTTATTAGATTCCTTAACGCCGGAATATTCGGAAG 581
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 448 AAACGGTGTCGCACTTCAGAAGGAGCTTATTAGATTCCTTAACGCCGGAATATTCGGAAG 507
Query 582 CACGAAAGAAACAAGCCACACATTGCCACACTCCGCCACAAGAGCCGCCATGCTTGTACG 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 508 CACGAAAGAAACAAGCCACACATTGCCACACTCCGCCACAAGAGCCGCCATGCTTGTACG 567
Query 642 AATCAACACTCTCCTCCAAGGATTTTCCGGTATCCGATTTGAGATTCTCGAAGCAATTAC 701
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 568 AATCAACACTCTCCTCCAAGGATTTTCCGGTATCCGCTTCGAGATTCTCGAAGCAATCAC 627
Query 702 CAGTTTCCTCAACAACAACATCACTCCATCTCTCCCCCTCCGTGGTACAATCACCGCCTC 761
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 628 CAGTTTCCTCAACAACAACATCACTCCATCTCTCCCACTCCGCGGTACAATCACCGCCTC 687
Query 762 CGGAGATCTCGTTCCTCTCTCCTACATCGCCGGACTTCTCACCGGTCGTCCCAATTCCAA 821
||||||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||||
Sbjct 688 CGGAGATCTCGTTCCTCTCTCTTACATCGCCGGAATTCTAACCGGCCGTCCCAATTCCAA 747
Query 822 AGCTACTGGTCCCAACGGTGAAGCTTTAACAGCAGAGGAAGCTTTCAAATTAGCAGGAAT 881
|||||| ||||||||||||||||||||||| || || ||||| ||||||||||| |||||
Sbjct 748 AGCTACCGGTCCCAACGGTGAAGCTTTAACCGCTGAAGAAGCCTTCAAATTAGCTGGAAT 807
Query 882 CAGCTCCGGATTCTTTGATCTCCAGCCTAAGGAAGGTCTCGCGCTAGTCAATGGCACGGC 941
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 808 CAGCTCCGGATTCTTCGATCTCCAGCCTAAGGAAGGTCTCGCGCTTGTCAATGGCACGGC 867
Query 942 GGTTGGATCTGGAATGGCGTCAATGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGC 1001
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 868 GGTTGGATCTGGAATGGCGTCGATGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGC 927
Query 1002 TGAGATTTTGTCGGCGGTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAGTTCACCGATCA 1061
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 928 TGAGATTTTGTCGGCGGTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAATTCACCGATCA 987
Query 1062 TCTCACTCACAGACTTAAACATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCA 1121
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 988 TCTCACTCACAGACTCAAACATCACCCCGGTCAAATCGAAGCGGCGGCGATAATGGAACA 1047
Query 1122 TATCCTCGACGGAAGCTCGTACATGAAATTAGCTCAGAAGCTTCACGAGATGGATCCGTT 1181
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1048 TATCCTCGACGGAAGCTCGTACATGAAATTAGCTCAGAAGCTTCACGAAATGGATCCGTT 1107
Query 1182 ACAGAAACCTAAACAAGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCA 1241
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1108 ACAGAAACCAAAACAAGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCA 1167
Query 1242 AATCGAAGTGATCCGTTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGA 1301
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1168 AATCGAAGTAATCCGTTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGA 1227
Query 1302 TAATCCGTTGATCGATGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAAC 1361
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1228 TAATCCGTTGATCGATGTATCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAAC 1287
Query 1362 ACCAATCGGAGTTTCAATGGATAACACGAGATTGGCGATAGCAGCGATTGGTAAACTCAT 1421
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1288 ACCAATCGGAGTTTCAATGGATAACACGAGATTGGCGATTGCAGCGATTGGTAAACTCAT 1347
Query 1422 GTTTGCTCAATTCTCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCCTCGAATCT 1481
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1348 GTTTGCTCAATTCTCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCTTCGAATCT 1407
Query 1482 AACCGCTTCGAGGAATCCAAGTTTGGATTATGGATTCAAGGGAGCTGAGATTGCAATGGC 1541
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1408 AACCGCATCGAGGAATCCAAGTTTGGATTATGGATTCAAAGGAGCTGAGATTGCAATGGC 1467
Query 1542 TTCTTATTGTTCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGC 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1468 TTCTTATTGTTCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGC 1527
Query 1602 AGAGCAACATAACCAAGATGTCAACTCTTTGGGACTAATCTCGTCTCGCAAAACTTCTGA 1661
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1528 AGAGCAACATAACCAAGATGTGAACTCTTTGGGACTAATCTCATCTCGCAAAACTTCTGA 1587
Query 1662 AGCTGTTGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGT 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588 AGCTGTTGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGT 1647
Query 1722 GGATTTGAGACATTTGGAGGAGAATTTGAGACAGACTGTGAAGAACACTGTCTCTCAAGT 1781
||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||
Sbjct 1648 GGATTTGAGACATTTGGAGGAGAATCTGAAACAGACTGTGAAGAACACTGTTTCTCAAGT 1707
Query 1782 GGCGAAGAAAGTTCTTACTACTGGAGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA 1841
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1708 GGCCAAGAAAGTTCTTACTACTGGTGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA 1767
Query 1842 AAAGGATTTACTCAAAGTTGTAGACCGTGAACAAGTCTACACATACGCGGATGATCCTTG 1901
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1768 GAAGGATTTACTCAAAGTCGTTGACCGTGAACAAGTCTACACATACGCGGATGATCCTTG 1827
Query 1902 TAGCGCAACGTACCCGTTGATTCAGAAGCTGAGACAAGTTATTGTTGACCATGCTTTGAT 1961
|||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 1828 TAGCGCAACGTACCCGTTGATTCAGAAGCTAAGACAAGTTATAGTTGATCATGCTTTGAT 1887
Query 1962 CAATGGTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGA 2021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1888 CAATGGTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTTGA 1947
Query 2022 GGAGGAGCTTAAGGCAGTGCTACCGAAAGAAGTGGAAGCAGCAAGAGCAGCCTACGATAA 2081
|||||||||||| || |||||||||||||||||||| ||||||||||| || ||||| ||
Sbjct 1948 GGAGGAGCTTAAAGCGGTGCTACCGAAAGAAGTGGAGGCAGCAAGAGCGGCGTACGACAA 2007
Query 2082 CGGAACATCGGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCATTGTATAGATT 2141
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2008 CGGAACATCAGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCTTTGTATAGATT 2067
Query 2142 CGTGAGGGAAGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACGTCGCCTGGAGA 2201
||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 2068 CGTGAGGGAGGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACATCGCCCGGAGA 2127
Query 2202 AGAGTTCGACAAGGTTTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGA 2261
|||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 AGAGTTTGATAAGGTGTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGA 2187
Query 2262 ATGTCTCAACGAGTGGAACGGAGCTCCCATTCCAATATGTTAAGAGTATAGTCCTCTGtt 2321
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 2188 ATGTCTCAACGAGTGGAACGGAGCTCCCATTCCTATATGTTAAGAGTAAAGTCCTCTGTT 2247
Query 2322 ttttt-CTTACCATAAAGTCttttttttttt-ACATGTCTGAATAATTTTACCAAATGAT 2379
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2248 TTTTTTCTTACCATAAAGTCTTTTTTTTTTTTACATGTCTGAATAATTTTACCAAATGAT 2307
Query 2380 TGTCTGTGAAGTGGTTTTATGTCTGTCTAATTTAAATTTGTGTGTAAAACTCATTGTAAG 2439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2308 TGTCTGTGAAGTGGTTTTATGTCTGTCTAATTTAAATTTGTGTGTAAAACTCATTGTAAG 2367
Query 2440 TTCTCAAATGAACAATTTTTCTTTTAC-A-AATTAATGTGTGAATCATACCTTC 2491
||||||||||||||||||||||||||| | || ||||||||||||||||||||
Sbjct 2368 TTCTCAAATGAACAATTTTTCTTTTACTACAA--AATGTGTGAATCATACCTTC 2419
> Ahg938226 jgi|Araly1|938226|scaffold_502417.1
Length=2195
Score = 2095 bits (1134), Expect = 0.0
Identities = 1787/2100 (85%), Gaps = 54/2100 (3%)
Strand=Plus/Plus
Query 250 GCGGAGCAAATGAAAGGTAGCCATTTGGATGAAGTGAAG-AGAATGGTTGCTGAGTTTAG 308
||||| ||||||||||| || ||||| |||||||||||| || ||||| | |||| |
Sbjct 120 GCGGATCAAATGAAAGGAAGTCATTTAGATGAAGTGAAGAAG-ATGGTCGAAGAGTACCG 178
Query 309 GAAG-CCAGTTGTGAATCTTGGTGGTGAGACTCTGACCATTGGACAAGTGGCTGCGATCT 367
| || |||||||||||||||||||| || || ||||| || |||||||| || |||||||
Sbjct 179 G-AGACCAGTTGTGAATCTTGGTGGAGAAACACTGACGATCGGACAAGTTGCGGCGATCT 237
Query 368 CAACTATTGGTAACAGTGTGAAGGTGGAGCTATCGGAGACAGCTAGAGCCGGTGTGAATG 427
| || | || ||| || ||||| ||| || ||||| | | ||||||||||| || |
Sbjct 238 CCACCGTAGGCGGCAGCGTTAAGGTTGAGTTAGCGGAGGCTTCAAGAGCCGGTGTCAAAG 297
Query 428 CTAGTAGTGATTGGGTTATGGAGAGTATGAACAAAGGCACTGATAGTTATGGTGTTACTA 487
|||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| || |
Sbjct 298 CTAGCAGTGATTGGGTTATGGAGAGTATGAACAAAGGCACTGACAGTTACGGTGTCACCA 357
Query 488 CTGGTTTTGGTGCTACTTCTCATCGGAGAACCAAAAACGGTGTCGCACTT-CAGAA-GGA 545
| || ||||||||||||||||| ||||||||||||||||| |||| || || || ||
Sbjct 358 CCGGCTTTGGTGCTACTTCTCACCGGAGAACCAAAAACGGCACCGCA-TTACA-AACAGA 415
Query 546 ACTTATTAGATTCCTT-AACGCCGGAATATTCGGAAGCACGAAAGAAACAAGCCACACAT 604
||| |||||||| || ||||||||||||||||||| |||||| || ||| | |||||
Sbjct 416 ACTCATTAGATT-TTTGAACGCCGGAATATTCGGAAACACGAAGGAGACATGTCACACGC 474
Query 605 TGCCACACTCCGCCACAAGAGCCGCCATGCTTGTAC-GAATCAACACTCTCCTCCAAGGA 663
|||| || ||||||||||||||||||||||| || | || |||||||||| |||||||||
Sbjct 475 TGCCGCAATCCGCCACAAGAGCCGCCATGCTCGT-CAGAGTCAACACTCTTCTCCAAGGA 533
Query 664 TTTTCCGGTATCCGATTTGAGATTCTCGAAGCAATTACCAGTTTCCTCAA-CAACAACAT 722
| |||||||||||||| |||||||||||||| ||||| ||| ||||||| | |||||||
Sbjct 534 TACTCCGGTATCCGATTCGAGATTCTCGAAGCGATTACAAGTCTCCTCAATC-ACAACAT 592
Query 723 CACTCCATCTCTCCCCCTCCGTGGTACAATCACCGCCTCCGGAGATCTCGTTCCTCTCTC 782
| |||| || || || |||||||| || || ||||||||||| |||||||||||||||||
Sbjct 593 CTCTCCTTCACTTCCTCTCCGTGGAACCATAACCGCCTCCGGCGATCTCGTTCCTCTCTC 652
Query 783 CTACATCGCCGGACTTCTCACCGGTCGTCCCAATTCCAAAGCTACTGGTCCCAACGGTGA 842
||||||||||||| |||| ||||| ||||| ||||||||||| || |||||| ||||||
Sbjct 653 CTACATCGCCGGAATTCTAACCGGCCGTCCTAATTCCAAAGCCACCGGTCCCGCCGGTGA 712
Query 843 AGCTTTAACAGCAG-AGGAAGCTTTC-A-AATTAGCAGGAATCAGCTCCGGATTCTTTGA 899
| | |||| || | | ||||||||| | || ||| |||||||| ||||||||||| ||
Sbjct 713 ATCGCTAACCGC-GAAAGAAGCTTTCGAGAA--AGCCGGAATCAGTTCCGGATTCTTCGA 769
Query 900 TCTCCAGCCTAAGGAAGG-TCTCGCGCTAGTCAATGGCACGGCGGTTGGATCTGGAATGG 958
||| |||||||||||||| | | || || || ||||||||||||||||||||||| ||||
Sbjct 770 TCTACAGCCTAAGGAAGGAT-TAGCTCTCGTTAATGGCACGGCGGTTGGATCTGGCATGG 828
Query 959 CGTCAATGGTGT-TATTCGAAACGAATGTTCTCTCTGTTTTGGCTGAGATTTTGTCGGCG 1017
|||| ||||| | |||||||| | ||||||| | || || || ||| |||| || |||
Sbjct 829 CGTCGATGGT-TCTATTCGAAGCCAATGTTCAAGCGGTGTTAGCGGAGGTTTTATCAGCG 887
Query 1018 GTTTTCGCAGAGGTGATGAGTGGTAAGCCTGAGTTCACCGATCATCTCACTCACAGACTT 1077
||||||| ||||| ||||| || || ||||| |||||||||||||| |||||| | ||
Sbjct 888 ATTTTCGCGGAGGTTATGAGCGGGAAACCTGAATTCACCGATCATCTGACTCACCG-TTT 946
Query 1078 -AAACATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCATATCCTCGACGGAAG 1136
|| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 947 GAAGCATCATCCCGGACAAATCGAAGCGGCGGCGATAATGGAACATATCCTCGACGGAAG 1006
Query 1137 CTCGTACATGAAATTAGCTCAGAAGCTTCACGAGATGGATCCGTTACAGAAACCTAAACA 1196
||| ||||||||||||||||| |||||||||||||||||||| || ||||| || |||||
Sbjct 1007 CTCATACATGAAATTAGCTCAAAAGCTTCACGAGATGGATCCATTGCAGAAGCCGAAACA 1066
Query 1197 AGATCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCAAATCGAAGTGATCCG 1256
||||||||||||||||||||| |||||||||||| |||| |||||||| ||||| |||||
Sbjct 1067 AGATCGTTACGCTCTTCGTACCTCTCCTCAATGGCTAGGACCTCAAATTGAAGTAATCCG 1126
Query 1257 TTACGCAACGAAATCGATCGAGCGTGAGATTAACTCCGTCAACGATAATCCGTTGATCGA 1316
| | || ||||||||||| |||||||| || |||||||| ||||||||||||||||||||
Sbjct 1127 TCAAGCTACGAAATCGATTGAGCGTGAAATCAACTCCGTTAACGATAATCCGTTGATCGA 1186
Query 1317 TGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTC 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1187 TGTTTCGAGGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTC 1246
Query 1377 AATGGATAACACGAGATTGGCGATAGCAGCGATTGGTAAACTCATGTTTGCTCAATTCTC 1436
||||||||||||||||||||||| || |||||||| || || |||||||||||||||||
Sbjct 1247 TATGGATAACACGAGATTGGCGATTGCTGCGATTGGGAAGCTTATGTTTGCTCAATTCTC 1306
Query 1437 AGAGCTTGTGAATGATTTCTACAACAATGGT-TTACCCTCGAATCTAACCGCTTCGAGGA 1495
|||||||| |||||||||||||||||||| || || ||||||||||| |||||||| |
Sbjct 1307 TGAGCTTGTTAATGATTTCTACAACAATGGACTT-CCTTCGAATCTAACAGCTTCGAGTA 1365
Query 1496 ATCCAAGTTTGGATTATGGATTCAAGGGAGCTGAGATTGCAATGGCTTCTTATTGTTCAG 1555
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||| || |
Sbjct 1366 ATCCAAGTTTGGATTATGGATTCAAAGGAGCAGAGATTGCTATGGCTTCTTATTGCTCTG 1425
Query 1556 AGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTCAATCAGCAGAGCAACATAACC 1615
||||||||||||| |||||||| || || ||||||||||||||||| || |||||||| |
Sbjct 1426 AGCTTCAATACTTGGCTAATCCAGTCACAAGCCATGTTCAATCAGCTGAACAACATAATC 1485
Query 1616 AAGATGTCAACTCT-TTGGGACTAATCTCGTCTCGCAAAACTTCTGAAGCTGTTGATATT 1674
||||||| || ||| |||| | | ||||||||||| ||||| ||||||||||| || |||
Sbjct 1486 AAGATGTGAATTCTCTTGG-ATTGATCTCGTCTCGTAAAACCTCTGAAGCTGTCGACATT 1544
Query 1675 CTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGTGGATTTGAGACAT 1734
|| ||||| ||||||||||||||||| || | ||| ||||||||||||||||||||||||
Sbjct 1545 CTTAAGCTAATGTCAACAACGTTCCTTGTGGGGATATGTCAAGCTGTGGATTTGAGACAT 1604
Query 1735 TTGGAGGAGAATTTGAGACAGACTGTGAAGAACACTGTCTCTCAAGTGGCGAAGAAAGTT 1794
|||||||||||| |||||||||||||||||||||| || |||||||| || ||||||||
Sbjct 1605 TTGGAGGAGAATCTGAGACAGACTGTGAAGAACACAGTTTCTCAAGTTGCTAAGAAAGTG 1664
Query 1795 CTTA-CTACTGGAGTCAATGGTGAGCTTCATCCTTCTCGCTTCTGCGA-AAAGGATTTAC 1852
||| | |||||| |||| |||||||| |||||||| || ||||| || |||| | || |
Sbjct 1665 -TTAACCACTGGAATCAACGGTGAGCTACATCCTTCACGGTTCTGTGAGAAAG-ACTTGC 1722
Query 1853 TCAAAGTTGTAGACCGTGAACAAGTCTACACATACG-CGGATGATCCTTGTAGCGCAACG 1911
| || || || || ||||||||||| | ||| || | || ||||||| ||||||||||||
Sbjct 1723 TTAAGGTCGTTGATCGTGAACAAGTGTTCACGTATGTCG-ATGATCCGTGTAGCGCAACG 1781
Query 1912 TACCCGTTGATTCAGA-AGCTGAGACAAGTTATTGTTGACCATGCTTTGATC-AATGGTG 1969
||||| ||||| |||| | |||||||||||||| ||||| || |||||| || || ||||
Sbjct 1782 TACCCATTGATGCAGAGA-CTGAGACAAGTTATCGTTGATCACGCTTTG-TCCAACGGTG 1839
Query 1970 AGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGAGGAGGAGC 2029
||| ||||||||||||||||||||| ||||| || |||||||||||||| || |||||||
Sbjct 1840 AGACTGAGAAGAATGCAGTGACTTCGATCTTTCAAAAGATTGGAGCTTTTGAAGAGGAGC 1899
Query 2030 TTAAGGCAGTGCTACCGAAAG-AAGTGGAAGCAGCAAGAGCAGCCT-ACGATAACGGAAC 2087
||||||| ||||| || |||| |||||||||| || ||||| | || | | ||| || ||
Sbjct 1900 TTAAGGCTGTGCTTCC-AAAGGAAGTGGAAGCCGCTAGAGC-GACTTATGGTAATGGTAC 1957
Query 2088 AT-CGGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCATTGTATAGATTCGTGA 2146
| || | || || ||| |||| |||||||||||||||||||| |||||||| |||||||
Sbjct 1958 -TGCGCCGATTCCTAACCGGATTAAGGAATGTAGGTCGTATCCGTTGTATAGGTTCGTGA 2016
Query 2147 GGGAAGAGCTTGGAACAGA-GCTT-TTGACCGGAGAGAAAGT-GACGTCGCCTGGAGAAG 2203
|||||||||| ||||| || | || ||||| || ||||| || | ||| || ||||| |
Sbjct 2017 GGGAAGAGCTCGGAAC-GAAG-TTGTTGACTGGGGAGAAGGTTGT-GTCTCCCGGAGAGG 2073
Query 2204 AGTTCGACAAGGTTTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGAAT 2263
|||| || ||||| ||||| || || |||||||||||||| ||||||||| ||||||| |
Sbjct 2074 AGTTTGATAAGGTCTTCACTGCAATGTGTGAAGGTAAAATTATTGATCCGTTGATGGATT 2133
Query 2264 GTCTCAACGAGTGGAACGGAGCTCCCATTCCAATATGTTAAGAGTATAGT-CCTCTGttt 2322
||||||| || |||||||||||||| ||||| || || |||||| | | | |||||||||
Sbjct 2134 GTCTCAAGGAATGGAACGGAGCTCCGATTCCGATTTGCTAAGAG-AGAATTCCTCTGTTT 2192
> Ahg887428 jgi|Araly1|887428|Al_scaffold_0693_1
Length=663
Score = 725 bits (392), Expect = 0.0
Identities = 436/458 (95%), Gaps = 0/458 (0%)
Strand=Plus/Plus
Query 1847 ATTTACTCAAAGTTGTAGACCGTGAACAAGTCTACACATACGCGGATGATCCTTGTAGCG 1906
||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 206 ATTTACTCAAAGTCGTTGACCGTGAACAAGTCTACACATATGCGGATGATCCTTGTAGCG 265
Query 1907 CAACGTACCCGTTGATTCAGAAGCTGAGACAAGTTATTGTTGACCATGCTTTGATCAATG 1966
||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||
Sbjct 266 CAACGTACCCGTTGATTCAGAAGCTAAGACAAGTTATAGTTGATCATGCTTTGATCAATG 325
Query 1967 GTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGAGGAGG 2026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 326 GTGAGAGTGAGAAGAATGCAGTGACTTCAATCTTCCATAAGATTGGAGCTTTCGAGGAGG 385
Query 2027 AGCTTAAGGCAGTGCTACCGAAAGAAGTGGAAGCAGCAAGAGCAGCCTACGATAACGGAA 2086
||||||| || ||||| |||||||||||||| ||||||||||| || ||||| |||||||
Sbjct 386 AGCTTAAAGCGGTGCTTCCGAAAGAAGTGGAGGCAGCAAGAGCGGCATACGACAACGGAA 445
Query 2087 CATCGGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCATTGTATAGATTCGTGA 2146
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 446 CATCAGCTATCCCGAACAGGATCAAGGAATGTAGGTCGTATCCTTTGTATAGATTCGTGA 505
Query 2147 GGGAAGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACGTCGCCTGGAGAAGAGT 2206
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 506 GGGAGGAGCTTGGAACAGAGCTTTTGACCGGAGAGAAAGTGACGTCGCCCGGAGAAGAGT 565
Query 2207 TCGACAAGGTTTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGATGGAATGTC 2266
| || ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 566 TTGATAAGGTGTTCACGGCGATTTGTGAAGGTAAAATCATTGATCCGATGTTGGAATGTC 625
Query 2267 TCAACGAGTGGAACGGAGCTCCCATTCCAATATGTTAA 2304
|||||||||||||||||||||||||||| |||||||||
Sbjct 626 TCAACGAGTGGAACGGAGCTCCCATTCCTATATGTTAA 663
Score = 340 bits (184), Expect = 2e-92
Identities = 198/205 (97%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 1608 ACATAACCAAGATGTCAACTCTTTGGGACTAATCTCGTCTCGCAAAACTTCTGAAGCTGT 1667
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 3 ACATAACCAAGATGTGAACTCTTTGGGACTAATCTCATCTCGCAAAACTTCTGAAGCTGT 62
Query 1668 TGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGTGGATTT 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 63 TGATATTCTCAAGCTTATGTCAACAACGTTCCTCGTTGCGATTTGTCAAGCTGTGGATTT 122
Query 1728 GAGACATTTGGAGGAGAATTTGAGACAGACTGTGAAGAACACTGTCTCTCAAGTGGCGAA 1787
||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| ||
Sbjct 123 GAGACATTTGGAGGAGAATCTGAAACAGACTGTGAAGAACACTGTTTCTCAAGTGGCCAA 182
Query 1788 GAAAGTTCTTACTACTGGAGTCAAT 1812
|||||||||||||||||| ||||||
Sbjct 183 GAAAGTTCTTACTACTGGTGTCAAT 207
> Ahg487203 jgi|Araly1|487203|fgenesh2_kg.6__337__AT5G04230.1
Length=2113
Score = 459 bits (248), Expect = 6e-128
Identities = 995/1348 (74%), Gaps = 82/1348 (6%)
Strand=Plus/Plus
Query 391 GTGGAGCTATCGGA-GACAGCTAGAGCCGGTGTGAATGCTAGTAGTGATTGGGTTATGGA 449
|||||||| || || || ||| | |||||||| || || |||||||| ||||| |||||
Sbjct 202 GTGGAGCTTTCTGAGGA-GGCTCGTGCCGGTGTAAAGGCGAGTAGTGAGTGGGTGATGGA 260
Query 450 GAGTATGAA-CAAAGGCACTGATAGTTATGGTGTTACTACTGGTTTTGGTGCTA-CTTCT 507
||| ||||| | || || || | ||||||| | || ||||| |||||| | | |||||
Sbjct 261 GAGCATGAATC-GTGGTACCGACACTTATGGTATCACCACTGGATTTGGTTC-ATCTTCT 318
Query 508 CATCGGAGAAC-CAAAAACGGTGTC-GCACTTCAGAAGGAACTTATTAGATTCCTT-AAC 564
| | |||| || | || |||| | || ||||| || || |||||||| | ||| |||
Sbjct 319 CGTAGGAGGACTGACCAA-GGTG-CTGCTCTTCAAAAAGAGCTTATTAG-GTACTTGAAC 375
Query 565 GCCGGAATATTCG-GA--AGC-AC-GA-AAGA-AACAAG-C-CACAC-ATTGCCAC-ACT 613
||||| ||||||| | || || || | || ||| | | |||| || || | ||
Sbjct 376 GCCGGGATATTCGCTACCGGCGACGGAGATGACGACACGTCAAACACGCTT-CCCCGGCT 434
Query 614 CCGCCACAAGAGCCGCCATGCTTGTACGAATCAACACTCTCCTCCAAGGATTTTCCGGTA 673
|| |||||||| || ||||| | || | ||||| ||||||||||| | || ||||
Sbjct 435 -GGCTACAAGAGCGGCGATGCTCATCCGCGTAAACACCCTCCTCCAAGGCTACTCTGGTA 493
Query 674 TCCGATTTGAGATTCTCGAAGCAATTACCAGTTTCCTCAACAACAACATCACTCCATCT- 732
| || |||||||| |||||||| || || | ||||||||| || ||||| || ||
Sbjct 494 TACGCTTTGAGATACTCGAAGCCATCACAAAATTCCTCAACCGGAAAATCACACC-GCTC 552
Query 733 CTCCCCCTCCGTGGTACAATCACCGCCTCCGGAGATCTCGTTCC-TCTCTCCTACATCGC 791
||||| ||||| || || || ||||||||||| || |||||||| | | || || || |
Sbjct 553 CTCCCTCTCCGAGGCACCATTACCGCCTCCGGCGACCTCGTTCCAT-TATCGTATATTGT 611
Query 792 CGGACTTCTCACCGGTCGTCCCAATTCCA-AAGCTACTGGTCCCA-ACGGTGAAGCT-TT 848
||| |||||| ||| || ||||| | || | || ||| |||| ||| | || | |
Sbjct 612 TGGATTTCTCATCGGGCGCCCCAACT-CACGATCT-TTGGGCCCATCCGGCG-AGATCCT 668
Query 849 AACAGCAGAGGAAGCTTTCAA-ATTAGCAGGA--ATCAGCTCCGGATTCTTT-GATCTCC 904
|| || ||| || ||||| || || ||| |||| ||| || ||| || ||||
Sbjct 669 CACCGCCTCGGAGGCCTTCAAGCTT-GCCGGAGTATCA--TCC---TT-TTTCGAACTCC 721
Query 905 AGCCTAAGGAAGGTCTCGCGCTAGTCAATGGCACGGCGGTTGGATCTGGAATGGCGTCAA 964
|||| |||||||| || ||||| || ||||| || ||||| ||||||| | || || |
Sbjct 722 AGCCCAAGGAAGGGCTTGCGCTCGTGAATGGGACTGCGGTGGGATCTGCTTTAGCCTCCA 781
Query 965 TGGTGTTATTCGAAACGAATGTTCTCTCTGTTTTGGCTGAGATT-TTGTCGGCGGT-TTT 1022
| | | | ||| | || || | | ||||| || ||| || | ||||| | |||
Sbjct 782 CGTTACTGTACGATGCCAACATTTTGGCGGTTTTTGCGGAGGTTGCT-TCGGCCATGTTT 840
Query 1023 CGCAGAGGTGATG-AGTGGTAAGCCTGAGTTCACCGATCATCTCACTCACAGACTTAAAC 1081
|| ||||| ||| || || || || ||||| || |||||||| || || | ||| || |
Sbjct 841 -GCTGAGGTTATGCAG-GGGAAACCGGAGTTTACGGATCATCTTACGCATAAACTCAAGC 898
Query 1082 ATCATCCCGGTCAAATCGAAGCGGCGGCGATAATGGAGCATATCCTCGACGGAAGCTCGT 1141
| ||||| ||||| || ||||| || || || |||||||||||| | ||||||||||| |
Sbjct 899 ACCATCCTGGTCAGATAGAAGCCGCCGCAATCATGGAGCATATCTTAGACGGAAGCTCTT 958
Query 1142 ACATGAAATTAGCTCAGA-AGCTTCACGAGATGGATCCG-TTACAGAAACCTAAACAAGA 1199
| | ||| |||||| | | || ||| |||| |||||| || |||||||||||||||||
Sbjct 959 ATGTCAAAGAAGCTCA-ACATCTCCACAAGATTGATCCGCTT-CAGAAACCTAAACAAGA 1016
Query 1200 TCGTTACGCTCTTCGTACTTCTCCTCAATGGTTAGGTCCTCAAATCGAAGTGATCCGTT- 1258
|||||||||||| || || || || |||||| | || || || || || ||||| |
Sbjct 1017 TCGTTACGCTCTGCGAACGTCGCCGCAATGGCTCGGACCACAGATTGAGGTGATAAGAGC 1076
Query 1259 ACGCAACGAA-ATCGATCGAGCGTGAGATTAACTCCGTCAACGATAATCCGTTGATCGAT 1317
| || || || || |||||| |||||||| ||||| || |||||||| || |||||||||
Sbjct 1077 A-GCGACAAAGAT-GATCGAACGTGAGATAAACTCGGTAAACGATAACCCTTTGATCGAT 1134
Query 1318 GTTTCGA-GGAACAAGGCGATTCACGGTGGTAACTTCCAAGGAACACCAATCGGAGTTTC 1376
||||| | ||||||| || ||||||||||| || ||||| || ||||| || || || |
Sbjct 1135 GTTTC-ACGGAACAAAGCTATTCACGGTGGGAATTTCCAGGGGACACCGATTGGTGTCGC 1193
Query 1377 AATGGATAACACGAGAT-TGGCGA-TAGCAGCGATTGGTAAACTCATGTTTGCTCAATTC 1434
||||||||||| | | | || | | || || | || || || ||||| ||||| |||
Sbjct 1194 CATGGATAACACTCG-TCTAGC-ACTTGCTTCGGTCGGGAAGCTAATGTTCGCTCAGTTC 1251
Query 1435 TCAGAGCTTGTGAATGATTTCTACAACAATGGTTTACCCTCGAATCTAACCG-CTTCGAG 1493
| || || || ||||||| ||||||||| || |||||||| |||||| | | | |||
Sbjct 1252 ACTGAACTCGTAAATGATTACTACAACAACGGGTTACCCTCTAATCTATCTGGCGG-GAG 1310
Query 1494 GAATCCAAGT-TTGGATTATGGATTCAAGGGAGCTGAGATT-GCAATGGCTTCTTATTGT 1551
|| || ||| ||| |||| || || || || || || | | || ||||||||||||||
Sbjct 1311 AAACCCTAGTCTTG-ATTACGGGTTAAAAGGCGCAGA-AGTAGCCATGGCTTCTTATTGC 1368
Query 1552 TCAGAGCTTCAATACTTAGCTAATCCTGTGACTAGCCATGTTC-AAT-CAGCAGAGCAAC 1609
||||||||||| | |||||||||||||||||| | |||||| | || | || |||||
Sbjct 1369 TCAGAGCTTCAGTTCTTAGCTAATCCTGTGACGAACCATGT-CGAAAGC-GCCTCGCAAC 1426
Query 1610 ATAACCAAGATGTCAACTCT-TTGGGACTAATCTCGT-CTCGCAAA-ACTTCTGAAGCTG 1666
| || |||||||| |||||| ||||| || |||||| | || ||| || | |||||||
Sbjct 1427 ACAATCAAGATGTTAACTCTCTTGGG-CTGATCTCGAGC-CG-AAAGACAGCAGAAGCTG 1483
Query 1667 TTGATATTCTCAAGCTTATGTCAACAAC 1694
| | ||| |||||||| |||||||||||
Sbjct 1484 TGGTTATCCTCAAGCTCATGTCAACAAC 1511
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95377973480
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5