BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G37360.1
Length=2479
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482729 jgi|Araly1|482729|fgenesh2_kg.4__1789__AT2G37360.1 2687 0.0
Ahg485729 jgi|Araly1|485729|fgenesh2_kg.5__1721__AT3G53510.1 1760 0.0
Ahg482955 jgi|Araly1|482955|fgenesh2_kg.4__2015__AT2G39350.1 344 2e-93
> Ahg482729 jgi|Araly1|482729|fgenesh2_kg.4__1789__AT2G37360.1
Length=2366
Score = 2687 bits (1455), Expect = 0.0
Identities = 1718/1841 (93%), Gaps = 34/1841 (2%)
Strand=Plus/Plus
Query 594 AACCGGATCGCAAAAGATAGCCTCAGGGGATCCATTACCTTAAACGGAGAAGTTCTTGAA 653
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 542 AACCGGATCGCCAAAGACAGCCTCAGGGGATCCATTACCTTAAACGGAGAAGTTCTTGAA 601
Query 654 TCAAGCA-TGCAGAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGAT 712
|| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 TCCAG-ACTGCAGAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGAT 660
Query 713 GCTTACCGTGGAGGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTC 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GCTTACCGTGGAGGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTC 720
Query 773 CAAGAAGAAGAAGAAAGCAAGGGTTCAAGCTCTGATTGACCAATTAGGCCTAAGGAGCGC 832
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 721 CAAGAAGAAGAAGAAAGCACGGGTTCAAGCTCTGATTGACCAATTGGGCCTAAGGAGCGC 780
Query 833 TGCAAAAACCGTGATTGGTGATGAAGGCCACAGAGGAGTGTCTGGAGGAGAAAGGAGACG 892
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 781 TGCAAAAACCGTGATTGGTGATGAAGGCCACAGAGGCGTGTCTGGAGGAGAAAGGAGACG 840
Query 893 GGTATCAATTGGAAACGACATAATCCATGACCCAATCATCCTCTTTCTAGATGAGCCAAC 952
||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 841 GGTTTCAATTGGAAACGACATAATCCATGACCCAATTATCCTCTTTCTCGATGAGCCAAC 900
Query 953 CTCAGGGCTCGACTCTACAAGCGCCTACATGGTTATCAAAGTCCTTCAGAGAATCGCACA 1012
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 901 CTCAGGGCTTGACTCTACGAGCGCCTACATGGTTATCAAAGTGCTTCAGAGAATCGCACA 960
Query 1013 AAGTGGCAGCATAGTTATCATGTCAATCCATCAGCCTAGTTACAGAATCATGGGTCTT-C 1071
||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |
Sbjct 961 GAGTGGCAGCATAGTTATCATGTCCATCCATCAGCCAAGTTACAGAATCATGGGT-TTGC 1019
Query 1072 TAGATCAGTTAATCTTCCTTTCTAAGGGAAACACAGTCTACAGCGGCTCACCAACACATC 1131
|||||||||||||||||||||||| ||||||||| || || |||||||||||||||||||
Sbjct 1020 TAGATCAGTTAATCTTCCTTTCTAGGGGAAACACGGTTTATAGCGGCTCACCAACACATC 1079
Query 1132 TCCCTCAGTTCTTCTCAGAATTCAAGCACCCAATTCCTGAAAACGAGAACAAAACAGAGT 1191
||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1080 TCCCTCAGTTCTTCTCAGAGTTCGAGCACCCGATTCCTGAAAACGAGAACAAAACAGAGT 1139
Query 1192 TCGCTCTCGATCTCATCCGAGAGCTGGAATATTCTACAGAAGGAACCAAGCCACTTGTCG 1251
||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct 1140 TCGCTCTCGATCTCATCCGAGAGCTGGAAAATTCTGCAGAAGGAACCAAGTCACTTGTCG 1199
Query 1252 AGTTCCACAAGCAATGGCGAGCAAAGCAAGC--A--C-C-AAGCTACAACAACAATAACA 1305
||||||||||| ||||||||||||||||||| | | | |||||| | ||| |||||
Sbjct 1200 AGTTCCACAAGAAATGGCGAGCAAAGCAAGCGCAATCACCAAGCTATAGCAATGGTAACA 1259
Query 1306 AGAGAAACACCAACGTATCTTCTCTCAAAGAAGCGATAACCGCGAGTATCTCAAGAGGGA 1365
||| ||||| ||||| |||| ||| |||||||||||||||||||||||||| |||||||
Sbjct 1260 AGAAAAACAACAACGCATCT-CTC--AAAGAAGCGATAACCGCGAGTATCTCCAGAGGGA 1316
Query 1366 AACTCGTCTCTGGAGCAACGAACAACAACTCATCAAACCTAACACCATCATTCCAAACAT 1425
||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 1317 AACTCGTCTCTGGAGCAAC-AA-A-CAACTCATCAAACCTAACACCATCATTCCAAACAT 1373
Query 1426 TCGCCAATCCTTTCTGGATTGAAATGATAGTAATAGGCAAACGTGCTATATTAAACTCAA 1485
||||||||||||||||||| |||||||| || ||||||||||| |||||| |||||||||
Sbjct 1374 TCGCCAATCCTTTCTGGATCGAAATGATCGTCATAGGCAAACGCGCTATACTAAACTCAA 1433
Query 1486 -GAAGACAACCAGAACTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCATC 1544
|| |||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct 1434 TGA-GACAACCAGAGCTCCTCGGAATGCGACTAGGAGCTGTAATGGTGACCGGAATCATC 1492
Query 1545 CTAGCTACAATGTTCACTAACCTAGACAATTCCCCAAAAGGAGCACAAGAACGTTTAGGA 1604
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1493 CTAGCCACAATGTTCACTAACCTAGACAATTCCCCAAAAGGAGCACAAGAACGTCTAGGA 1552
Query 1605 TTCTTCGCATTCGCAATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTCTTT 1664
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1553 TTCTTCGCATTCGCAATGTCCACAACATTCTACACATGTGCAGAAGCAATCCCAGTGTTT 1612
Query 1665 CTACAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCCTCC 1724
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1613 CTAGAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCCTACCGGAGATCCTCC 1672
Query 1725 TACGTCCTCTCTCAATCCATAATCTCAATCCCGGCCTTAATCGTCCTCTCCGCAAGCTTC 1784
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 1673 TACGTCCTCTCTCAATCCATAATCTCAATCCCTGCCTTAATCTTCCTCTCCGCAAGCTTC 1732
Query 1785 GCCGCCACAACATTCTGGGCCGTTGGTCTCGACGGAGGCGCCAATGGTTTCTTCTTCTTC 1844
|||||||||||||||||||||||||||||| ||||||| ||| ||||||| ||||||||
Sbjct 1733 GCCGCCACAACATTCTGGGCCGTTGGTCTCTCCGGAGGCTCCAGTGGTTTCCTCTTCTTC 1792
Query 1845 TACTTCACAATCCTAGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGTTCCTCTCCGGC 1904
| | |||||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 1793 TTCCTCACAATCCTCGCCTCATTCTGGGCCGGAAGCTCCTTCGTAACATTCCTCTCCGGC 1852
Query 1905 GTTATA-CCAAACGTAATGCTCGGATTCACAGTCGTAGTAGCGATCCTCGCTTACTTCCT 1963
|| | |||| ||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 1853 GTCGTCGCCAA-CGTAATGCTCGGATTCACAATCGTTGTAGCGATCCTCGCTTACTTCCT 1911
Query 1964 CCTCTTCTCCGGATTCTTCATCTCTC-GAGATCGAATTCCTGTTTACTGGCTCTGGTTCC 2022
|||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||
Sbjct 1912 CCTCTTCTCCGGATTCTTCATCTC-CAGAGATCGAATCCCTGTTTACTGGCTCTGGTTCC 1970
Query 2023 ATTACATCTCCTTGGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGAATTTCAAA-AT 2081
||||||||||||| |||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 1971 ATTACATCTCCTTAGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGAATT-CGAAGAT 2029
Query 2082 CCGACGAGATGTTTCGCCAGAGGAGTTCAG-TTATTCGACAATTCGCCGTTGGGGGAGTT 2140
||||||| |||||||| ||||||||||||| || || || ||||||||||||||||||||
Sbjct 2030 CCGACGAAATGTTTCGTCAGAGGAGTTCAGATTTTT-GATAATTCGCCGTTGGGGGAGTT 2088
Query 2141 TCCGAACGATGTGAAAGTGAATCTGTTGAAGAGTATGAGCGGTGTATTGGGGACGAATGT 2200
||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2089 TCCGAACGACGTGAAATTGAATCTGTTGAAGAGTATGAGCGGTGTTTTGGGGACGAATGT 2148
Query 2201 GACGGCGGAGACTTGTGTGACGACGGGGATTGATATTTTGAAACAGCAAGGGATTACGGA 2260
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 2149 GACGGCGGAGACTTGTGTGACGACGGGGATTGATATATTGAAGCAGCAAGGGATTACGGA 2208
Query 2261 TATTAGTAAATGGAATTGTTTGTGGATTACTGTTGCTTGGGGTTTTTTCTTTAGGGTTTT 2320
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2209 TTTTAGTAAATGGAATTGTTTGTGGATTACTGTTGCTTGGGGATTTTTCTTTAGGGTTTT 2268
Query 2321 GTTTTATTTCACTCTCTTGATTGGTAGCAAGAACAAACGGAAGTGAT--T--AAACAGTT 2376
||||||||||||| | |||||||| |||||||||||||||| ||||| | ||||| ||
Sbjct 2269 GTTTTATTTCACTTTGTTGATTGGGAGCAAGAACAAACGGAGGTGATGATTTAAACAATT 2328
Query 2377 GTTCtttttttttttt-tgaaaaaaggtttgttgtaatttt 2416
|| |||||||| || ||||||| | ||||||||||||||
Sbjct 2329 -TT-TTTTTTTTGGTTGTGAAAAATG-TTTGTTGTAATTTT 2366
Score = 765 bits (414), Expect = 0.0
Identities = 502/544 (92%), Gaps = 8/544 (1%)
Strand=Plus/Plus
Query 20 TCCTATTCGTGTCTTCTTTGTGGGTATGAGCTATATAACCCACATAACCTGAGAAGATTA 79
|||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 1 TCCTATTCATTTCTTCTTTGTGGGTATGAGCTATATAACCCATATAGCCTGAGAAGATTA 60
Query 80 AGACAAAAATACATAGAAAATGTCTGGCTTGCTCGGAAAATCATCTCCGGCCAAACGGGT 139
||||||||| || | ||||||||||||||| ||||||| ||||||||||||||| ||
Sbjct 61 AGACAAAAAAACGGAAAAAATGTCTGGCTTG---GGAAAATTATCTCCGGCCAAACGAGT 117
Query 140 TGATGGCAACAATGATCTTCCTATGTATTATGTAAACCCGATGTCCGTGGAGCCTCAAGG 199
|| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |
Sbjct 118 AGACGGCAACAATGATCTTCCTCTGTTTTATGTAAACACGATGTCCGTGGAGCCTCAACG 177
Query 200 ACGTCCAAGCGACACGACTAGAGTCTCTGTCACATTCGCCGAGCATCTTATGAACGTGGA 259
|||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 178 TCGTCCAAGAGACACGCCTAGAGTCTCTGTCACATTCGCCGAGCATCTTATGAATGTGGA 237
Query 260 GGATGCAAGGAATGATGAAAGTGCAAGTAGCCGGGCTCTGGGAATTGCCTCACCTATCAA 319
||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 238 GGATGCAAGGAATGATGAAAGTGCAAGTAGCCGGGCTCTAGGAATTGCCTCACCAATCAC 297
Query 320 TTCTGCTGCATCCTCTTTCAATTCATGGGCCTCTGCTCCTGCTTCTTCTATATCTTCTTC 379
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 298 TTCTTCTGCATCCTCTTTCAATTCATGGACCTCTGCTCCTGCTTCTTCTATATCGTCTTC 357
Query 380 CCCGTTTGTTCTTTCATTC-ACTGACTTGACCTACAGCGTGAAGATCCAGAAGAAGTTTA 438
|||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 358 CCCGTTCGTTCTTTCATTCAAC-GACTTGACCTACAGCGTGAAGATCCAGAAGAAGTTTA 416
Query 439 ATCCCCTCGCTTGCTGCAG-AAGGTCAGGAAATGATTCCTCGGTGAACACTAAGATACTA 497
||||||||||||||||||| ||| ||| |||| | |||||||||||||||||||||||||
Sbjct 417 ATCCCCTCGCTTGCTGCAGGAAG-TCACGAAACGGTTCCTCGGTGAACACTAAGATACTA 475
Query 498 TTGAATGGTATTTCAGGTGAAGCCCGCGAAGGGGAGATGAT-GGCGGTTCTTGGAGCAAG 556
||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 476 TTGAACGGAATTTCAGGTGAAGCCCATGAAGGGGAGATGATTGGCGGTTCTTGGAGCAAG 535
Query 557 TGGG 560
||||
Sbjct 536 TGGG 539
> Ahg485729 jgi|Araly1|485729|fgenesh2_kg.5__1721__AT3G53510.1
Length=2610
Score = 1760 bits (953), Expect = 0.0
Identities = 1673/2013 (83%), Gaps = 80/2013 (4%)
Strand=Plus/Plus
Query 372 TCTTCTTCCCCGTTTGTTCTTTCATTCACTGACTTGACCTACAGCGTGAAGATCCAGAAG 431
|||||||| |||||||||||||| |||| |||||||| || || |||||||||||||||
Sbjct 571 TCTTCTTCTCCGTTTGTTCTTTCCTTCAAAGACTTGACTTATAGTGTGAAGATCCAGAAG 630
Query 432 AAGTTTAATCCCCTCGCTTGCTGC--AGA-AGGTCAGGAAATGATTCCTCG-G-TGAACA 486
|||||||| ||| || | || ||| || | | |||| | | | | |||| |
Sbjct 631 AAGTTTAAGCCCTTCCCCTGTTGCGGTGATTCGCCTTTTAATG-GT-ATGGAGATGAATA 688
Query 487 CTAAGATACTATTGAATGGTATTTCAGGTGAAGCCCGCGAAGGGGAGATGATGGCGGTTC 546
||||| | || ||||||||||||| |||||||| || ||||| ||||||||||| ||||
Sbjct 689 CTAAGGTGCTGCTGAATGGTATTTCTGGTGAAGCTCGGGAAGGAGAGATGATGGCCGTTC 748
Query 547 TTGGAGCAAGTGGGTCCGGTAAATCAACACTGATCGATGCATTAGCCAACCGGATCGCAA 606
||||||| || ||||| || |||||||| || ||||||||||||||||| ||||| |||
Sbjct 749 TTGGAGCGAGCGGGTCAGGGAAATCAACCCTTATCGATGCATTAGCCAATCGGATTTCAA 808
Query 607 AAGATAGCCTCA-G-GG-GATCCATTACCTTAAACGGAGAAGTTCTTGAATCAAGCATGC 663
|||| ||||| | | || ||| ||||| |||||||| |||||||||||||| ||| |||
Sbjct 809 AAGAGAGCCT-ACGTGGTGAT--ATTACTTTAAACGGGGAAGTTCTTGAATCCAGCCTGC 865
Query 664 AGAAAGTCATATCGGCTTACGTGATGCAAGACGACCTTCTCTTCCCGATGCTTACCGTGG 723
| ||||||||||||||||| ||||||||||| || ||||| ||||||||||| |||||||
Sbjct 866 ATAAAGTCATATCGGCTTATGTGATGCAAGATGATCTTCTGTTCCCGATGCTCACCGTGG 925
Query 724 AGGAAACTCTAATGTTCTCTGCAGAGTTCAGGCTCCCTCGTTCACTCTCCAAGAAGAAGA 783
| |||||| | ||||| ||||| ||||||||||| || | || || || |||||||| |
Sbjct 926 AAGAAACTTTGATGTTTTCTGCTGAGTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAA 985
Query 784 AGAAAGCAAGGGTTCAAGCTCTGATTGACCAATTAGGCCTAAGGAGCGCTGCAAAAACCG 843
|||||||| ||||||||||||||||||| || | ||||| || | ||| ||||||||||
Sbjct 986 AGAAAGCACGGGTTCAAGCTCTGATTGATCAGCTCGGCCTGAGAAACGCAGCAAAAACCG 1045
Query 844 TGATTGGTGATGAAGGCCACAGAGGAGTGTCTGGAGGAGAAAGGAGACGGGTATCAATTG 903
|||| |||||||| || |||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1046 TGATCGGTGATGAGGGGCACAGAGGTGTGTCTGGAGGAGAAAGGAGACGGGTGTCAATTG 1105
Query 904 GAAACGACATAATCCATGACCCAATCATCCTCTTTCTAGATGAGCCAACCTCAGGGCTCG 963
||| ||| ||||||||||| || || ||||||||||| ||||||||||||||||| ||||
Sbjct 1106 GAACCGATATAATCCATGATCCGATTATCCTCTTTCTTGATGAGCCAACCTCAGGTCTCG 1165
Query 964 ACTCTACAAGCGCCTACATGGTTATCAAAGTCCTTCAGAGAATCGCACAAAGTGGCAGCA 1023
||||||| || || ||||||||| ||||||| |||||||||||||||||||| |||||||
Sbjct 1166 ACTCTACCAGTGCATACATGGTTGTCAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCA 1225
Query 1024 TAGTTATCATGTCAATCCATCAGCCTAGTTACAGAATCATGGGTCTT-CTAGATCAGTTA 1082
||||||||||||| ||||||||||| |||||||||||| |||| ||| || ||| |||||
Sbjct 1226 TAGTTATCATGTCCATCCATCAGCCGAGTTACAGAATCTTGGG-CTTACTCGATAAGTTA 1284
Query 1083 ATCTTCCTTTCTAAGGGAAACACAGTCTACAGCGGCTCACCAACACATCTCCCTCAGTTC 1142
|||||||| |||| ||||||||| || ||||||||||| |||||||||||||||| ||||
Sbjct 1285 ATCTTCCTATCTAGGGGAAACACCGTTTACAGCGGCTCCCCAACACATCTCCCTCGGTTC 1344
Query 1143 TTCTCAGAATTCAAG-CACCCAATTCCTGAAAACGAGAACAAAACAGAGTTCGCTCTCGA 1201
||||| |||||| | |||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1345 TTCTCGGAATTC-GGTCACCCAATTCCTGAAAACGAGAACAAGCCAGAGTTCGCACTCGA 1403
Query 1202 TCTCATCCGAGAGCTGGAATATTCTACAGAAGGAACC-AAGCCACTTGTCGAGTTCCACA 1260
||| ||||| ||||| ||| ||||| ||||||||||| ||||| || |||||||||||||
Sbjct 1404 TCTTATCCGTGAGCTAGAAGATTCTCCAGAAGGAACCAAAGCC-CTAGTCGAGTTCCACA 1462
Query 1261 AGCAATGGCGAGCAAAGCAAGCAC-CAAGCTACAACAACAATAACAAGAGAAACACCAAC 1319
|||||||||||||||||||| | | ||||| || | || || || || ||||||
Sbjct 1463 AGCAATGGCGAGCAAAGCAAAC-CTCAAGC--CAG-AGCAG-AA---GA-AA-CACCAAT 1512
Query 1320 GTATCTTCTCTCAAAGAAGCGATAACCGCGAGTATCTCAAGAGGGAAACTCGTCTCTGGA 1379
|||||| ||| ||||| || || | ||| |||||||| ||||| ||||| ||||| |||
Sbjct 1513 GTATCT-CTC--AAAGATGCAATCAGCGCAAGTATCTCCAGAGGCAAACTTGTCTCCGGA 1569
Query 1380 GCAACGAACAACAACTCATCAAACCTAACACCATCATTCCAAACATTCGCCAATCCTTTC 1439
||||| || | | || | | | | || ||| ||| |||| || || || || |||
Sbjct 1570 GCAAC-AA-A-C--CT-A--AGA--T--CATCAT--TTC-AAACCTTTGCAAACCCATTC 1614
Query 1440 TGGATTGAAATGATAGTAATAGGCAAACG-TGCTATATTAAACTCAAGAAGACAACCAGA 1498
|||| ||||||| | || || |||||||| | ||||| ||||||||||||||||||||||
Sbjct 1615 TGGACTGAAATGCTCGTGATTGGCAAACGAT-CTATACTAAACTCAAGAAGACAACCAGA 1673
Query 1499 ACTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCATCCTAGCTACAATGTT 1558
|| |||||||| | || |||||||| | |||||||||||||||||||| ||||| ||
Sbjct 1674 GCTATTCGGAATGCGCCTCGGAGCTGTTCTAGTCACCGGAATCATCCTAGCCACAATATT 1733
Query 1559 CACTAACCTAGACAATTCCCCAAAAGG-AGCACAAGAACGTTTAGGATTCTTCGCATTCG 1617
| || ||||||||||| |||| ||| | ||||||||||||||| |||||||||||||
Sbjct 1734 CTGGAAACTAGACAATTCACCAAGAGGTAT-ACAAGAACGTTTAGGGTTCTTCGCATTCG 1792
Query 1618 CAATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTCTTTCTACAAGAACGTT 1677
||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| |
Sbjct 1793 CAATGTCCACAACATTCTACACCTGTGCAGAAGCAATACCAGTCTTTCTACAAGAACGCT 1852
Query 1678 ACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCCTCCTACGTCCTCTCTC 1737
|||||||||||||||||||||||||||||||||||||| |||| || ||||||||| |||
Sbjct 1853 ACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGCGATCATCATACGTCCTCGCTC 1912
Query 1738 A-ATCCATAATCTCAATCCCGGC-CTTAATCGTCCTCTCCGCAAGC-TTCGCCGCCACAA 1794
| | | |||||||||||||| || || ||| || | ||||| || |||||||||||||
Sbjct 1913 ACA-CAATAATCTCAATCCCTGCTCT-AATAATCTTATCCGCC-GCCTTCGCCGCCACAA 1969
Query 1795 CATTCTGGGCCGTTGGTCTCGACGGAGGCGCC-AATGGTTTCTTCTTCTTCTACTTCACA 1853
||||||||||||| || |||| ||||||| || || || ||| ||||||||| |||||||
Sbjct 1970 CATTCTGGGCCGTAGGACTCGCCGGAGGCTCCGAA-GGCTTCCTCTTCTTCTTCTTCACA 2028
Query 1854 ATCCT-AGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGTTCCTCTCCGGCGTTA-TAC 1911
||||| | | | |||||||| |||||||||||||| || ||| | |||||||| | | |
Sbjct 2029 ATCCTCA-CAGCGTTTTGGGCCGGAAGCTCCTTCGTGACATTCTTATCCGGCGT-AGT-C 2085
Query 1912 -CAAACGTAATGCTCGGATTCACAGTCGTAGTAGCGATCCTCGCTTACTTCCTCCTCTTC 1970
|| |||| ||| |||||||||| || || ||||| |||||||| || ||||||||||||
Sbjct 2086 TCACACGTGATGATCGGATTCACGGTGGTTGTAGCAATCCTCGCATATTTCCTCCTCTTC 2145
Query 1971 TCCGGATTCTTCATCTCTC-GAGATCGAATTCCTGTTTACTGGCTCTGGTTCCATTACAT 2029
||||||||||||||||| | |||||||||| || || |||||| |||||||||||||| |
Sbjct 2146 TCCGGATTCTTCATCTC-CAGAGATCGAATCCCAGTCTACTGGATCTGGTTCCATTACCT 2204
Query 2030 CTCCTTGGTGAAATACCCTTACGAAGGAGTGT-TGCAGAACGAATTTCAAA-ATCCGACG 2087
|||| | |||||||||||||||||||| || | | ||||||||||| | || ||||||||
Sbjct 2205 CTCCCTAGTGAAATACCCTTACGAAGGTGT-TCTACAGAACGAATT-CGAAGATCCGACG 2262
Query 2088 AGATGTTTCG-CCAGAGGAGTTC-AGTTATTCGACAATTCGCCGTTGGGGGA-GTTTCCG 2144
| ||| ||| || | || | || | | ||||||||||||||| |||| | ||| |||
Sbjct 2263 AAATGCTTCATCC-GTGG-GATCCAAATGTTCGACAATTCGCCGCTGGGACAAGTT-CCG 2319
Query 2145 AACGATGTGAAAGTGAATCTGTTGAAGAGTATGAGCGGTGTATTGGGGA-CGAATGTGAC 2203
|| |||||| | | || ||||||| |||||||| || ||||||| | || |||||
Sbjct 2320 GCCGCCGTGAAAATCAGCCTCCTGAAGAGCATGAGCGGCGTTTTGGGGATC-AACGTGAC 2378
Query 2204 GGCGGAGACTTGTGTGACGACGGGGATTGATATTTTGAAACAGCAAGGGATTACGGATAT 2263
|||||||||||| || |||||||| || || ||| |||| || ||||| || || || ||
Sbjct 2379 GGCGGAGACTTGCGTAACGACGGGAATCGACATTCTGAAGCAACAAGGAATCACTGAGAT 2438
Query 2264 TAGTAAATGGAATTGTTTGTGGATTACTGTTGCTTGGGGTTTTTTCTTTAGGGTTTTGTT 2323
||| ||||||||||| |||||||| ||||| |||||||| || |||||||||||| | ||
Sbjct 2439 TAGCAAATGGAATTGCTTGTGGATCACTGTAGCTTGGGGATTCTTCTTTAGGGTTCTCTT 2498
Query 2324 TTATTTCACTCTCTTGATTGGTAGCAAGAACAA 2356
|| ||||| |||||||| || |||||||||||
Sbjct 2499 CTACTTCACACTCTTGATCGGAAGCAAGAACAA 2531
> Ahg482955 jgi|Araly1|482955|fgenesh2_kg.4__2015__AT2G39350.1
Length=2439
Score = 344 bits (186), Expect = 2e-93
Identities = 684/916 (75%), Gaps = 68/916 (7%)
Strand=Plus/Plus
Query 1485 AGAAGACAACCAGA-ACTCCTCGGAATGAGACTAGGAGCTGTAATGGTCACCGGAATCAT 1543
|||||||||||||| | | ||||||| ||| | | | || | |||||||| ||||
Sbjct 1479 AGAAGACAACCAGAGA-TATTCGGAATCAGAATCGCCTCCGTTGTTATCACCGGATTCAT 1537
Query 1544 CCTAGCTACAATGTTCACTAAC--CTAGACAATTCCCCAAAAGGAGCACAAGAACGTTTA 1601
||| || || |||| || | |||||||||| |||||||||| ||||| || |||
Sbjct 1538 CCTCGCCACCGTGTT--CTGGCGATTAGACAATTCACCAAAAGGAGTTCAAGAGCGGTTA 1595
Query 1602 GGATTCTTCGCATTCGCAATGTCAACAACATTCTACACATGTGCAGAAGCAATCCCAGTC 1661
|| |||||||| ||||| |||||||||| |||||||| || || || ||| | |||||
Sbjct 1596 GGGTTCTTCGCCTTCGCGATGTCAACAATGTTCTACACTTGCGCCGATGCATTACCAGTT 1655
Query 1662 TTTCTACAAGAACGTTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGAGATCC 1721
||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1656 TTTCTCCAGGAACGTTACATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGATCC 1715
Query 1722 TCCTACGTCCTCTCTCAATCCATAATCTCAATCCCGGC-CTTAATCGTCCTCTCCGCAAG 1780
|||||||| |||||||| |||| |||| ||||| | |||| || ||||||||| | |
Sbjct 1716 TCCTACGTTCTCTCTCACGCCATCGTCTCTTTCCCGTCGCTTA-TCTTCCTCTCCGTA-G 1773
Query 1781 CTTC-GCCGCCACAACAT-TCTGGGCCGTTGGTCTC-GACGGAGGCGCCAATGGTTTCTT 1837
||| || || || || | | ||||| || || || || |||||| ||||||| |||
Sbjct 1774 CTTTTGCAGCGACGACGTAT-TGGGCAGTGGG-CTTAGATGGAGGC-CCAATGGGC-CTT 1829
Query 1838 CTTCTTCTACT-TC--A-CAATCCTAGCCTCATTTTGGGCAGGAAGCTCCTTCGTAACGT 1893
|| ||||||| | | || | ||||||| || ||| ||||||||||||| || ||||
Sbjct 1830 -TTGTTCTACTGTTTGATCATTT-TAGCCTCCTTCTGGTCAGGAAGCTCCTTTGTCACGT 1887
Query 1894 TCCTCTCCGGCGTTATACCAAACGTAATGCTCGGATT-CACAGTCGTAGTAGCGATCCTC 1952
| || || || || | || | || ||| | || || |||| |||| || || || |
Sbjct 1888 TTCTATCAGGTGTGGTTCCTAGTGTGATGTTGGG-TTACACAATCGTCGTTGCTATTTTA 1946
Query 1953 GCTTACTTCCTCCTCTTCTCCGGATTCTTCATCT-CTCGAGATCGAATTCCTGTTTACTG 2011
||||||||| | | ||| |||||||||||| | || | ||||| || | ||||||
Sbjct 1947 GCTTACTTCTTGTTGTTCAGTGGATTCTTCATCAACA-GAAACCGAATCCCGGATTACTG 2005
Query 2012 GCTCTGGTTCCATTACATCTCCTTGGTGAAATACCCTTACGAAGGAGTGTTGCAGAACGA 2071
| | ||||| |||||||| || |||||||||||||| ||||||| ||| || ||||||||
Sbjct 2006 GATTTGGTTTCATTACATGTCATTGGTGAAATACCCCTACGAAGCAGTTTTACAGAACGA 2065
Query 2072 ATT-TCAAAATCCGACGA-GATGTTTCGCCAGAGGAGTTCAG-TTATTCGACAATTCGCC 2128
|| || | | |||| | | ||||| | |||||||||||| || |||||||| | ||
Sbjct 2066 GTTCTCTGA-TGCGACCAAG-TGTTTTGTGAGAGGAGTTCAGATT-TTCGACAACACTCC 2122
Query 2129 GTTGGGGGAGTTTCC-GAACGATG-TGAAAG-TGAATCTG-TTGA-AGAGTATGAGCG-G 2182
||| ||||| || || ||| | || |||| | ||| ||| ||| | ||| |||| |
Sbjct 2123 GTTAGGGGAATTACCAGAA-G-TGATGAA-GCTGAGGCTGCTTGGTACAGT--GAGCAAG 2177
Query 2183 T-GTATTGG-G-GACGA-ATGTGACGGCGGAGACTTGTGTGACGACGGGGATT-G-ATAT 2236
| | | || | ||||| || | | | | ||| ||| | || || || || | ||||
Sbjct 2178 TCGC-TCGGTGTGACGATATCT-A-G-CTC-GACGTGTTTAACTACTGG--TTCGGATAT 2230
Query 2237 TTTGAA-ACAGCAAGGGATTACGGAT-AT-T-AGTAAATGGAATTGTTTGTGGATTACTG 2292
| ||| | ||||||| | | || | | | |||||||||||||| |||| || || |
Sbjct 2231 TCTGACGA-AGCAAGG-AGT--GGTTCAGCTGAGTAAATGGAATTGCTTGTTCATCACAG 2286
Query 2293 TTGCTTG-GGGTTTTTTCTTTAGGGTTTTGTTTTATTTCACTCTCTTGA-TTGGTAGCAA 2350
|||||| ||||| ||| |||||| ||||||| || |||||| | || | |||| |||||
Sbjct 2287 TTGCTTTTGGGTTCTTT-TTTAGGATTTTGTTCTACTTCACTTTGTT-ACTTGGAAGCAA 2344
Query 2351 GAACAAACGGAAGTGA 2366
|||||| |||| ||||
Sbjct 2345 GAACAAGCGGAGGTGA 2360
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93435370985
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5