BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G37650.1
Length=2522
Score E
Sequences producing significant alignments: (Bits) Value
Ahg345509 jgi|Araly1|345509|fgenesh1_pg.C_scaffold_4001851 3125 0.0
Ahg345506 jgi|Araly1|345506|fgenesh1_pg.C_scaffold_4001848 2580 0.0
> Ahg345509 jgi|Araly1|345509|fgenesh1_pg.C_scaffold_4001851
Length=2223
Score = 3125 bits (1692), Expect = 0.0
Identities = 1981/2112 (94%), Gaps = 54/2112 (3%)
Strand=Plus/Plus
Query 1 ATGATTACTGAACCAAGTCTAACCGGGATTTCAGGTATGGTTAATCGGAACCGTTTATCC 60
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 1 ATGATTACTGAACCAAGTCTAACCGGGATTTCAGGTACGGTTAACCGGAACCGTTTATCC 60
Query 61 GGTTTACCCGATCAA-CCTTCTTCGCATAGCTTCACTCCGGTAACACTATACGACGGTTT 119
||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||
Sbjct 61 GGTTTACCCGATCAATCC-GCTTCGCATAGCTTCACTCCGGTGACACTATACGACGGTTT 119
Query 120 CAATTACAATCTCTCCTCCGATCATATAAACACCGTTGTAGCAGCGCCGGAGAATTCAGT 179
|||||||||||||||||||||||||| ||||||||| ||||| || | ||||||||||
Sbjct 120 CAATTACAATCTCTCCTCCGATCATAGAAACACCGTCGTAGCTCCGTCTCAGAATTCAGT 179
Query 180 TTTTATCCGGgaagaagaagaagaagaGGATCCAGCTGATGATTTCGATTTCTCTGACGC 239
||||| |||||||||||||||| | | ||||| |||||||||||||||||||| || ||
Sbjct 180 CTTTATTCGGGAAGAAGAAGAAG-A-A-GATCCGGCTGATGATTTCGATTTCTCCGATGC 236
Query 240 TGTTTTAGGATACATTAGTCAGATGTTGAATGAGGAAGACATGGATGATAAAGTCTGCAT 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 TGTTTTAGGATACATTAGTCAGATGTTGAATGAGGAAGACATGGATGATAAAGTCTGCAT 296
Query 300 GCTTCAAGAGTCTCTAGATCTCGAAGCTGCTGAGAGATCGTTATACGAAGCTATTGGTAA 359
||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct 297 GCTTCAAGAGTCTCTGGATCTGGAAACAGCTGAGAGATCGTTATACGAAGCTATTGGTAA 356
Query 360 GAAGTATCCTCCATCTCCAGAACGAAACTTAGCTTTCGCTGA-ACGAAACAG-CGAGAAT 417
|||||||||||||||||||||||||||||||||||||||||| | ||||| | |||||||
Sbjct 357 GAAGTATCCTCCATCTCCAGAACGAAACTTAGCTTTCGCTGATA-GAAAC-GACGAGAAT 414
Query 418 CTTGACCGTGTGGTTCCAGGAAACTACACTGGAGGAGATTGTATAGGTTTTGGGAACGGT 477
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 415 CTTGACCGTGTGGTTCCAGGAAACTACACTGGAGGTGATTGTATAGGTTTCGGGAACGGT 474
Query 478 GGAATCAAGCCTTTGAGTAGTGGTTTTACTTTGGATTTTCGAAATCCTCAGAGTTGTTCT 537
|||||||||||||||||| ||||||| |||||||||||||||||| | | |||
Sbjct 475 GGAATCAAGCCTTTGAGTGGTGGTTTCACTTTGGATTTTCGAAAT-C-C-------TTCC 525
Query 538 TCGATTCTAAGTGTTCCACAATCTAATGGTTTAATTACTATCTACGGAGATGGAATTGAT 597
||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct 526 TCGGTTCTAAGTGTTCCACAATCTAATGGTTTGATTACTATCTATGGAGATGGAATTGTT 585
Query 598 GAATCGTC---G-A-A----G-A-----A--C-AATCGGGAGAATCATCAATCTGTTTGG 639
|||||||| | | | | | | | |||||||||| ||||||||||||||||
Sbjct 586 GAATCGTCGAAGAAGAGTTTGTATCCTGATTCGAATCGGGAGAGTCATCAATCTGTTTGG 645
Query 640 TTGTTTAGGCGTGAGATTGAAGAAGCTAATAGGTTTAATCCTGAAGAAAACGAGTTGATT 699
|||||||||||||||||||||||||||||||||||| ||||||| ||||| |||
Sbjct 646 TTGTTTAGGCGTGAGATTGAAGAAGCTAATAGGTTTCTTCCTGAACAAAAC------ATT 699
Query 700 GTGAATTTCAGAGAGGAGAATTGTGTGAGCAAAGCAAGGAAGAACTCTAGCCGTGATGAG 759
|||||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||||
Sbjct 700 GTGAATTTCAGAGAGGAGAATTGTATGAACAAAGGAAGGAAAAACTCTAGCCGTGATGAG 759
Query 760 ATTTGTGTTGAAGAAGAGAGGAGTAGTAAATTACCTGCAGTGTTTGGTGAGGATATTTTG 819
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 760 ATTTGTGTGGAAGAAGAGAGGAGTAGTAAATTGCCTGCAGTGTTTGGTGAGGATATTTTG 819
Query 820 AGGTCAGATGTTGTAGATAAGATCTTGGTTCATGTACCAGGAGGAGAGAGCATGAAGGAG 879
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 820 AGGTCAGATGTTGTTGATAAGATCTTGGTTCATGTACCAGGAGAAGAGAGCATGAAGGAG 879
Query 880 TTTAATGCGTTGCGTGACGTTTTGAAGAAAGGAGTGGAGAAGAAGAAAGCTTCAGAT-GC 938
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||
Sbjct 880 TTTGATGCGTTGCGTGAAGTTTTGAAGAAAGGAGTGGAGAAGAAGAAAGCTTCAG-TGGC 938
Query 939 TCAAGGTGggaagagacgagccagaggaagaggacgtggaagaggaagaggaggaggagg 998
||||||||||||||||| | ||| | |||||||| ||| | |||||||||||||||||
Sbjct 939 TCAAGGTGGGAAGAGAC--G--AGA-G-AGAGGACGAGGACGTGGAAGAGGAGGAGGAGG 992
Query 999 aggGCAAAATGGGAAAAAAGAAGTTGTGGATTTGAGAAGTTTATTGATACATTGTGCTCA 1058
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 993 AGGGCAAAATGGGAAAAAAGAAGTTGTCGATTTGAGAAGTTTATTGATACATTGTGCTCA 1052
Query 1059 AGCTGTTGCAGCTGATGATCGTAGGTGTGCAGGTCAGTTGTTAAAACAGATAAGATTGCA 1118
|||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| ||||
Sbjct 1053 AGCTGTTGCAGCTGATGATCGTAGATGTGCGGGTCAGTTGTTGAAACAGATTAGACTGCA 1112
Query 1119 TTCTACGCCGTTTGGTGATGGGAATCAGAGGTTGGCTCATTGTTTTGCTAATGGTCTCGA 1178
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1113 TTCTACGCCGTTTGGTGATGGGAACCAGAGGTTGGCTCATTGTTTTGCTAATGGTCTCGA 1172
Query 1179 GGCGAGGTTAGCCGGTACTGGAAGCCAGATTTACAAAGGGATTGTGAGTAAACCGAGATC 1238
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1173 GGCGAGGTTAGCCGGTACTGGGAGTCAGATTTACAAAGGGATTGTGAGTAAACCGAGATC 1232
Query 1239 CGCTGCAGCTGTGTTGAAGGCTCACCAGCTTTTTCTTGCGTGTTGTCCTTTTAGAAAGCT 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1233 TGCTGCAGCTGTGTTGAAGGCTCACCAGCTTTTTCTTGCGTGTTGTCCTTTTAGGAAGCT 1292
Query 1299 CTCTTATTTCATAACTAATAAGACGATACGTGATCTTGTTGGGAACTCTCAGCGCGTTCA 1358
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct 1293 CTCTTATTTCATAACTAATAAGACGATACGCGATCTTGTTGGGAATTCTCAGCGGGTTCA 1352
Query 1359 TGTTATTGATTTTGGTATTCTTTACGGTTTCCAATGGCCAACTCTTATTCACCGGTTTTC 1418
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1353 TGTTATTGATTTTGGTATTCTTTACGGTTTCCAGTGGCCAACTCTTATTCACCGGTTTTC 1412
Query 1419 GATGTATGGATCACCGAAGGTTAGGATCACCGGGATTGAGTTTCCGCAGCCCGGGTTTCG 1478
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1413 GATGTATGGATCACCGAAGGTTAGGATCACTGGGATTGAGTTTCCACAGCCCGGGTTTCG 1472
Query 1479 TCCGGCACAGCGGGTTGAAGAAACTGGTCAAAGGTTAGCAGCGTATGCCAAACTCTTTGG 1538
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1473 TCCAGCACAGCGGGTTGAAGAAACTGGTCAAAGGTTAGCAGCGTATGCCAAACAATTTGG 1532
Query 1539 GGTGCCATTTGAGTATAAAGCAATTGCTAAGAAGTGGGATGCAATTCAACTTGAAGATCT 1598
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1533 GGTGCCATTTGAGTATAAAGCAATTGCTAAGAAGTGGGATGCAGTTCAACTTGAAGATCT 1592
Query 1599 TGATATCGACAGGGATGAGATTACTGTTGTTAATTGCCTGTACCGGGCTGAGAATTTGCA 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1593 TGATATCGACAGGGATGAGATTACTGTTGTTAATTGCCTGTACCGGGCTGAGAATTTACA 1652
Query 1659 TGATGAGTCAGTCAAAGTAGAAAGTTGTAGAGACACTGTTCTCAATTTGATCGGGAAGAT 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1653 TGATGAGTCAGTCAAAGTAGAAAGTTGTAGAGACACTGTTCTCAATTTGATCGGGAAGAT 1712
Query 1719 CAATCCTGATCTCTTT-GTCTTTGGCATTGTGAATGGTGCATACAACGCACCGTTTTTCG 1777
|||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1713 CAATCCCGATCT-TTTCGTCTTTGGCATAGTGAATGGTGCATACAACGCACCGTTTTTCG 1771
Query 1778 TAACACGGTTTCGCGAAGCTCTATTTCATTTCTCCTCGATTTTTGACATGCTTGAGACAA 1837
| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1772 TGACACGGTTTCGCGAGGCTCTATTTCATTTCTCCTCGATTTTCGACATGCTTGAGACAA 1831
Query 1838 TTGTGCCACGAGAAGACGAAGAGAGGATGTTCCTTGAGATGGAGGTCTTTGGGAGAGAGG 1897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1832 TTGTGCCACGAGAAGACGAAGAGAGGATGTTCCTTGAGATGGAGGTCTTTGGGAGAGAGG 1891
Query 1898 CACTGAATGTGATTGCTTGCGAAGGTTGGGAAAGAGTGGAGAGGCCTGAGACATACAAGC 1957
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1892 CATTGAATGTGATTGCTTGCGAAGGTTGGGAAAGAGTGGAGAGGCCTGAGACATACAAGC 1951
Query 1958 AGTGGCACGTACGGGCTATGAGGTCAGGGTTGGTGCAGGTTCCATTTGACCCAAGCATTA 2017
|||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1952 AGTGGCACGTCCGGGCTATGAGGTCAGGGTTGGTGCAAGTTCCTTTTGACCCAAGCATTA 2011
Query 2018 TGAAGACATCGCTGCATAAGGTCCACA-CATTCTACCACAAGGATTTTGTGATCGATCAA 2076
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2012 TGAAGACATCGCTGCATAAGGTCC-CATCATTCTACCACAAGGATTTTGTGATCGATCAA 2070
Query 2077 GATAACCGGTGG 2088
||||||||||||
Sbjct 2071 GATAACCGGTGG 2082
Score = 182 bits (98), Expect = 1e-44
Identities = 126/139 (91%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 2318 TTTGTTGTTTCTCAGCTAGATTCTCCTAACGGTATTCTTGTAGCTAGGGT-GATCAGATT 2376
||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||
Sbjct 2086 TTTGTTGTTTCTCAGCTAGGTTCTCCTAACGGTATTCTTGTAGCTAGGATTGATTAGAGA 2145
Query 2377 GTTTGTATATTGCTAGCAGAGTTAGTTTGTCTAGATTGTAACACATATAAGAGGAAGCTT 2436
|||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||
Sbjct 2146 GTTTGTATATTGCTAGCAGAGTTAACTTGTCTAGATTGTAACACGTACAAGAGGAAGCTT 2205
Query 2437 AGAGAAACTA-TGGTTTAA 2454
| |||||||| || |||||
Sbjct 2206 AAAGAAACTAATG-TTTAA 2223
> Ahg345506 jgi|Araly1|345506|fgenesh1_pg.C_scaffold_4001848
Length=1806
Score = 2580 bits (1397), Expect = 0.0
Identities = 1679/1807 (93%), Gaps = 52/1807 (3%)
Strand=Plus/Plus
Query 1 ATGATTACTGAACCAAGTCTAACCGGGATTTCAGGTATGGTTAATCGGAACCGTTTATCC 60
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 1 ATGATTACTGAACCAAGTCTAACCGGGATTTCAGGTACGGTTAACCGGAACCGTTTATCC 60
Query 61 GGTTTACCCGATCAA-CCTTCTTCGCATAGCTTCACTCCGGTAACACTATACGACGGTTT 119
||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||
Sbjct 61 GGTTTACCCGATCAATCC-GCTTCGCATAGCTTCACTCCGGTGACACTATACGACGGTTT 119
Query 120 CAATTACAATCTCTCCTCCGATCATATAAACACCGTTGTAGCAGCGCCGGAGAATTCAGT 179
|||||||||||||||||||||||||| ||||||||| ||||| || | ||||||||||
Sbjct 120 CAATTACAATCTCTCCTCCGATCATAGAAACACCGTCGTAGCTCCGTCTCAGAATTCAGT 179
Query 180 TTTTATCCGGgaagaagaagaagaagaGGATCCAGCTGATGATTTCGATTTCTCTGACGC 239
||||| |||||||||||||||| | | ||||| |||||||||||||||||||| || ||
Sbjct 180 CTTTATTCGGGAAGAAGAAGAAG-A-A-GATCCGGCTGATGATTTCGATTTCTCCGATGC 236
Query 240 TGTTTTAGGATACATTAGTCAGATGTTGAATGAGGAAGACATGGATGATAAAGTCTGCAT 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 TGTTTTAGGATACATTAGTCAGATGTTGAATGAGGAAGACATGGATGATAAAGTCTGCAT 296
Query 300 GCTTCAAGAGTCTCTAGATCTCGAAGCTGCTGAGAGATCGTTATACGAAGCTATTGGTAA 359
||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||
Sbjct 297 GCTTCAAGAGTCTCTGGATCTGGAAACAGCTGAGAGATCGTTATACGAAGCTATTGGTAA 356
Query 360 GAAGTATCCTCCATCTCCAGAACGAAACTTAGCTTTCGCTGA-ACGAAACAG-CGAGAAT 417
|||||||||||||||||||||||||||||||||||||||||| | ||||| | |||||||
Sbjct 357 GAAGTATCCTCCATCTCCAGAACGAAACTTAGCTTTCGCTGATA-GAAAC-GACGAGAAT 414
Query 418 CTTGACCGTGTGGTTCCAGGAAACTACACTGGAGGAGATTGTATAGGTTTTGGGAACGGT 477
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 415 CTTGACCGTGTGGTTCCAGGAAACTACACTGGAGGTGATTGTATAGGTTTCGGGAACGGT 474
Query 478 GGAATCAAGCCTTTGAGTAGTGGTTTTACTTTGGATTTTCGAAATCCTCAGAGTTGTTCT 537
|||||||||||||||||| ||||||| |||||||||||||||||| | | |||
Sbjct 475 GGAATCAAGCCTTTGAGTGGTGGTTTCACTTTGGATTTTCGAAAT-C-C-------TTCC 525
Query 538 TCGATTCTAAGTGTTCCACAATCTAATGGTTTAATTACTATCTACGGAGATGGAATTGAT 597
||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct 526 TCGGTTCTAAGTGTTCCACAATCTAATGGTTTGATTACTATCTATGGAGATGGAATTGTT 585
Query 598 GAATCGTC---G-A-A----G-A-----A--C-AATCGGGAGAATCATCAATCTGTTTGG 639
|||||||| | | | | | | | |||||||||| ||||||||||||||||
Sbjct 586 GAATCGTCGAAGAAGAGTTTGTATCCTGATTCGAATCGGGAGAGTCATCAATCTGTTTGG 645
Query 640 TTGTTTAGGCGTGAGATTGAAGAAGCTAATAGGTTTAATCCTGAAGAAAACGAGTTGATT 699
|||||||| ||| |||||||||||||| ||||||| ||||||| ||||| |||
Sbjct 646 TTGTTTAGTAGTGGGATTGAAGAAGCTAGTAGGTTTCTTCCTGAACAAAAC------ATT 699
Query 700 GTGAATTTCAGAGAGGAGAATTGTGTGAGCAAAGCAAGGAAGAACTCTAGCCGTGATGAG 759
|||||||||||||||||||||||| ||| ||||| |||||| ||||||||||||||||||
Sbjct 700 GTGAATTTCAGAGAGGAGAATTGTATGAACAAAGGAAGGAAAAACTCTAGCCGTGATGAG 759
Query 760 ATTTGTGTTGAAGAAGAGAGGAGTAGTAAATTACCTGCAGTGTTTGGTGAGGATATTTTG 819
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 760 ATTTGTGTGGAAGAAGAGAGGAGTAGTAAATTGCCTGCAGTGTTTGGTGAGGATATTTTG 819
Query 820 AGGTCAGATGTTGTAGATAAGATCTTGGTTCATGTACCAGGAGGAGAGAGCATGAAGGAG 879
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 820 AGGTCAGATGTTGTTGATAAGATCTTGGTTCATGTACCAGGAGAAGAGAGCATGAAGGAG 879
Query 880 TTTAATGCGTTGCGTGACGTTTTGAAGAAAGGAGTGGAGAAGAAGAAAGCTTCAGAT-GC 938
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||
Sbjct 880 TTTGATGCGTTGCGTGAAGTTTTGAAGAAAGGAGTGGAGAAGAAGAAAGCTTCAG-TGGC 938
Query 939 TCAAGGTGggaagagacgagccagaggaagaggacgtggaagaggaagaggaggaggagg 998
||||||||||||||||| | ||| | |||||||| ||| | |||||||||||||||||
Sbjct 939 TCAAGGTGGGAAGAGAC--G--AGA-G-AGAGGACGAGGACGTGGAAGAGGAGGAGGAGG 992
Query 999 aggGCAAAATGGGAAAAAAGAAGTTGTGGATTTGAGAAGTTTATTGATACATTGTGCTCA 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 993 AGGGCAAAATGGGAAAAAAGAAGTTGTGGATTTGAGAAGTTTATTGATACATTGTTCTCA 1052
Query 1059 AGCTGTTGCAGCTGATGATCGTAGGTGTGCAGGTCAGTTGTTAAAACAGATAAGATTGCA 1118
|||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| ||||
Sbjct 1053 AGCTGTTGCAGCTGATGATCGTAGATGTGCGGGTCAGTTGTTGAAACAGATTAGACTGCA 1112
Query 1119 TTCTACGCCGTTTGGTGATGGGAATCAGAGGTTGGCTCATTGTTTTGCTAATGGTCTCGA 1178
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1113 TTCTACGCCGTTTGGTGATGGGAACCAGAGGTTGGCTCATTGTTTTGCTAATGGTCTCGA 1172
Query 1179 GGCGAGGTTAGCCGGTACTGGAAGCCAGATTTACAAAGGGATTGTGAGTAAACCGAGATC 1238
|||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 1173 GGCGAGGTTAGCTGGTACTGGGAGTCAGATTTACAAAGGGATTGTGAGTAAACCGAGATC 1232
Query 1239 CGCTGCAGCTGTGTTGAAGGCTCACCAGCTTTTTCTTGCGTGTTGTCCTTTTAGAAAGCT 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1233 TGCTGCAGCTGTGTTGAAGGCTCACCAGCTTTTTCTTGCGTGTTGTCCTTTTAGGAAGCT 1292
Query 1299 CTCTTATTTCATAACTAATAAGACGATACGTGATCTTGTTGGGAACTCTCAGCGCGTTCA 1358
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct 1293 CTCTTATTTCATAACTAATAAGACGATACGCGATCTTGTTGGGAATTCTCAGCGGGTTCA 1352
Query 1359 TGTTATTGATTTTGGTATTCTTTACGGTTTCCAATGGCCAACTCTTATTCACCGGTTTTC 1418
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1353 TGTTATTGATTTTGGTATTCTTTACGGTTTCCAGTGGCCAACTCTTATTCACCGGTTTTC 1412
Query 1419 GATGTATGGATCACCGAAGGTTAGGATCACCGGGATTGAGTTTCCGCAGCCCGGGTTTCG 1478
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1413 GATGTATGGATCACCGAAGGTTAGGATCACTGGGATTGAGTTTCCACAGCCCGGGTTTCG 1472
Query 1479 TCCGGCACAGCGGGTTGAAGAAACTGGTCAAAGGTTAGCAGCGTATGCCAAACTCTTTGG 1538
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1473 TCCAGCACAGCGGGTTGAAGAAACTGGTCAAAGGTTAGCAGCGTATGCCAAACAATTTGG 1532
Query 1539 GGTGCCATTTGAGTATAAAGCAATTGCTAAGAAGTGGGATGCAATTCAACTTGAAGATCT 1598
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1533 GGTGCCATTTGAGTATAAAGCAATTGCTAAGAAGTGGGATGCAGTTCAACTTGAAGATCT 1592
Query 1599 TGATATCGACAGGGATGAGATTACTGTTGTTAATTGCCTGTACCGGGCTGAGAATTTGCA 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1593 TGATATCGACAGGGATGAGATTACTGTTGTTAATTGCCTGTACCGGGCTGAGAATTTACA 1652
Query 1659 TGATGAGTCAGTCAAAGTAGAAAGTTGTAGAGACACTGTTCTCAATTTGATCGGGAAGAT 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1653 TGATGAGTCAGTCAAAGTAGAAAGTTGTAGAGACACTGTTCTCAATTTGATCGGGAAGAT 1712
Query 1719 CAATCCTGATCTCTTT-GTCTTTGGCATTGTGAATGGTGCATACAACGCACCGTTTTTCG 1777
|||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1713 CAATCCCGATCT-TTTCGTCTTTGGCATAGTGAATGGTGCATACAACGCACCGTTTTTCG 1771
Query 1778 TAACACG 1784
| |||||
Sbjct 1772 TGACACG 1778
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95073251520
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5