BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G37670.1
Length=2712
Score E
Sequences producing significant alignments: (Bits) Value
Ahg345530 jgi|Araly1|345530|fgenesh1_pg.C_scaffold_4001872 4252 0.0
Ahg359776 jgi|Araly1|359776|fgenesh1_pg.C_scaffold_964000001 1423 0.0
Ahg919251 jgi|Araly1|919251|scaffold_100532.1 671 0.0
Ahg912773 jgi|Araly1|912773|Al_scaffold_0001_3027 538 8e-152
> Ahg345530 jgi|Araly1|345530|fgenesh1_pg.C_scaffold_4001872
Length=2736
Score = 4252 bits (2302), Expect = 0.0
Identities = 2594/2734 (95%), Gaps = 23/2734 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGATGGAAACAAATTGGATCGGAAGAAGACAATGACGATGAACTGGGAAGGATTA 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4 ATGGAAGATGGGAACAAATTGGATCGGAAGAAGACAATGACGATGAACTGGGAAGGATTA 63
Query 61 GGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCT 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 GGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCA 123
Query 121 GCTTTAACTTTCGACATGGCTAATGCTTCTTCTTCCGATGAAGATGAAGATTTCGACGAT 180
|||||| |||| |||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 124 GCTTTAGCTTTTGACATGTCTGCTGCTTCTTCTTCCGATGAAGATGAAGATTTCGACGAT 183
Query 181 TGTCGACTCTCGTTTTCTTCAGCCGTCTCTTCCTTAACCACCGCCTCTAGGAAATTTCGT 240
|| || ||||||||||| || ||||| ||||| ||||||||||| || ||||||||||||
Sbjct 184 TGCCGTCTCTCGTTTTCCTCTGCCGTTTCTTCGTTAACCACCGCGTCAAGGAAATTTCGT 243
Query 241 ACGCCGGCGATGTCTCCTGATTACGATATTTGGATGGCTGCTCCGGGATCTATATCTGAG 300
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 244 ACGCCGGCGATGTCTCCTGATTAAGATATTTGGATGGCTGCTCCGGGATCAATATCTGAG 303
Query 301 CGTCGTCGTCGTCTTCTCCATGGGATGGGACTTGCTAGTAATAAAGATATGGTTAGTGCT 360
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 304 CGTCGTCGTCGTCTTCTCCATGGGATGGGGCTTGTTAGTAATAAAGATATGGTTAGTGCT 363
Query 361 GTTTCCATTCGTCGCGTTGTTTCTAATGCGCCTGTTGTTAGTAACGGtgaagaaaagaag 420
||||| |||||||| ||||||||||| ||| || |||||| ||| |||||||| ||||||
Sbjct 364 GTTTCTATTCGTCGTGTTGTTTCTAACGCGGCTATTGTTACTAATGGTGAAGATAAGAAG 423
Query 421 atgaagaagaag---atgaatcatg-ag--g-t--tg-at--ga-a-----caagatcat 462
|||||||||||| |||||| || || | | || || || | |||||||||
Sbjct 424 ATGAAGAAGAAGATTATGAATGGTGAAGTTGATGATGAATCGGAGATTCCTCAAGATCAT 483
Query 463 gatcatgTTCCGGTTATGCTTGCGAGGTCAAGATCGGAATCAGATATTGAGAGGTTCTTG 522
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 484 GATCATGTTCCGGTTATGCTTGCTAGGTCGAGATCGGAATCAGATATTGAGAGGTTCTTG 543
Query 523 ATTGAGAAACGAAGAAAAGAAGAGATTTTAGGGAAAATCTCAAAGCAGCGTCTTACAAGA 582
||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct 544 ATTGAGAAACGAAGAAAAGAAGAGATTTTAGGGAAGATCTCGAAGCAGCGTCTTACGAGA 603
Query 583 ACGTATTCTACTATTTGTCCTACAAGGACAAGGATTTGTCAGTACCAAACTCCGATCAGA 642
|||||||| || ||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct 604 ACGTATTCGACAATTGGAGTTACAAGGACAAGGATTTGTCAGTACCAAACACCGATCAGG 663
Query 643 CAAACACCTGCGGTTTGTGGAAATGGAAAAGCTTTGCGCGGTGGTGG---AGAGGCGTTG 699
||| | |||||||||||| |||||||||||||||||||||||||||| || ||||||
Sbjct 664 CAATCGCCTGCGGTTTGTCGAAATGGAAAAGCTTTGCGCGGTGGTGGTTCGGATGCGTTG 723
Query 700 ACATCGGTAATGTCGAATGCGAGGGTTGGCGCGTTTTTCTTGATAAAGAATCTTGATACA 759
|||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 724 ACATCGGTTATGTCGAATGCGAGGCTTGGCGCGTTTTTCTTGATTAAGAATCTTGATACA 783
Query 760 GGGAAAGAGTTTATAGTGAATGAGTATGATGAAGATGGAATGTGGAATAGGCTTAGTGAT 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 GGGAAAGAGTTTATAGTGAATGAGTATGATGAAGATGGAATGTGGAATAGGCTTAGTGAT 843
Query 820 CTGCAAACAGGGAAGCAATTAACTTTGGAGGAGTTTGAGAAATGTGTTGGTTATTCACCT 879
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 844 TTGCAAACAGGGAAGCAATTAACTTTGGAGGAATTTGAGAAATGTGTTGGTTATTCACCT 903
Query 880 GTGGTTAAAGAGCTTATGCGTAGAGAGAATGTGAATAGGATTAACTACGAACCGTTAATG 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 GTGGTTAAAGAGCTTATGCGTAGAGAGAATGTGAATAGGATTAACTACGAACCGTTAATG 963
Query 940 GATCTTCGCAAGTTTAATTCGTATCTTTCCAAGAGTGTGAGGTTAAGTAAGAGAAGAGGA 999
|||||||| |||||||||||||||||||| || || |||||||||||||||||||| ||
Sbjct 964 GATCTTCGGAAGTTTAATTCGTATCTTTCGAAAAGCGTGAGGTTAAGTAAGAGAAGGGGT 1023
Query 1000 GCTGCATTGTTGAAGAACATTAAAGGTGTAGCTCATTCCATGAGTTTACGCGTTGCGGAT 1059
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1024 GCTGCATTGTTGAAGAACATAAAAGGTGTAGCTCATTCCATGAGTTTACGGGTTGCGGAT 1083
Query 1060 AAAGATGTAAGCGATGGAAGCACTGATAGTCCGAAAAAGGGGAAAGATCATAAACATGGT 1119
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1084 AAAGATGTAAGCGATGGAAGCACCGATAGTCCGAAAAAGGGGAAAGATCATAAGCATGGT 1143
Query 1120 AAAGCTAATGAGTGGGTGAAAGTTAGACCAACAGGGAAATCTTACAAGGAGTTAAGTGCT 1179
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1144 AAAGCTAATGAGTGGGTGAAAGTTAGACCAACAGGGAAATCTTACAAGGAATTAAGTGCT 1203
Query 1180 TTACATATGTGTCAAGAGATTCAAGCTCATGAGGGTGCGGTTTGGACTATCAAGTTTAGT 1239
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1204 TTGCATATGTGTCAAGAGATTCAAGCTCATGAGGGTGCGGTTTGGACTATCAAATTTAGT 1263
Query 1240 CAAGATGCTCATTATCTAGCGAGCGGAGGAGCGGATAGAGTCATTCATGTGTGGGAGGTT 1299
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1264 CAAGATGCTCATTATCTAGCGAGCGGAGGAGCGGATAGAGTCATTCATGTATGGGAGGTT 1323
Query 1300 CAAGAATGTGAACTAATGTCTATGAATGAAGGAAGTCTCACTCCTATTCATCCTTCACTT 1359
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1324 CAAGAATGTGAACTAATGTCTATGAATGAAGGGAGTCTCACTCCTATTCATCCTTCACTT 1383
Query 1360 TGTGACTCTTCTGGAAATGAGATAACTGTGGTAGAGAAGAAAAAGAAAGGAAAGGGATCA 1419
||||||||| ||||||||||||||||||||||||||||||||| ||||||||| || ||
Sbjct 1384 TGTGACTCTGCTGGAAATGAGATAACTGTGGTAGAGAAGAAAAGGAAAGGAAAAGGCTCT 1443
Query 1420 TCCGGGA-GACGACACAATCATATTCCGGATTACGTACATGTTCCTGAAACAGTCTTCTC 1478
|| |||| ||||| |||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1444 TC-GGGAAGACGAAACAATCATATTCCGGATTACGTCCATGTTCCTGAAACCGTCTTCTC 1502
Query 1479 GTTTTCTGATAAGCCTGTTTGCTCTTTGAAAGGTCATCTGGATGCTATTTTGGATCTTTC 1538
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1503 CTTTTCTGATAAGCCTGTTTGCTCTTTGAAAGGTCATTTGGATGCTATTTTGGATCTGTC 1562
Query 1539 ATGGTCCAAATCTCAGCTTCTTCTTTCATCTTCTATGGACAAAACAGTCAGGTTATGGGA 1598
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1563 ATGGTCCAAATCTCAGCTTCTTCTTTCATCTTCCATGGACAAAACAGTCAGGTTATGGGA 1622
Query 1599 TATAGAAACCAAAACATGTCTCAAACTGTTTGCCCATAATGACTATGTGACATGTATTCA 1658
| ||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||
Sbjct 1623 TCTAGAAACCAAAACATGTCTCAAATTGTTTGCTCATAATGACTACGTGACATGTATCCA 1682
Query 1659 GTTCAGTCCAGTGGATGAAAATTATTTCTTAAGTGGTTCACTTGACGCTAAAATAAGGAT 1718
||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1683 GTTTAGCCCAGTGGATGAAAATTATTTCTTAAGTGGTTCACTTGACGCTAAGATAAGGAT 1742
Query 1719 ATGGAGCATACAAGATCGACATGTTGTGGAATGGAGTGATCTTCATGAAATGGTTACTGC 1778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1743 ATGGAGCATACAAGATCGACATGTTGTGGAATGGAGTGATCTTCATGAAATGGTTACTGC 1802
Query 1779 TGCTTGCTACACACCAGACGGTCAGGGTGCACTTATCGGGTCACATAAAGGAATTTGTCG 1838
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1803 TGCTTGCTACACTCCAGACGGTCAGGGTGCACTTATCGGTTCACATAAAGGAATTTGTCG 1862
Query 1839 TGCTTACGATACAGAAGATTGTAAGCTGAGCCAAACTAATCAGATTGATGTTCAGAGCAA 1898
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1863 TGCTTACGATACAGAAGATTGTAAGCTGAGCCAAACTAGTCAGATTGATGTTCAGAGCAA 1922
Query 1899 CAAGAAATCACAAGCGAAAAGGAAGATCACTAGTTTTCAGTTTTCCCCGGTGAATCCATC 1958
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1923 TAAGAAATCGCAAGCGAAAAGGAAGATCACTAGTTTTCAGTTTTCCCCGGTGAATCCATC 1982
Query 1959 TGAAGTTCTTGTCACATCCGCTGATTCACGGATTCGAATACTAGACGGTTCTGAAGTTAT 2018
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1983 CGAAGTTCTTGTCACATCCGCTGATTCACGGATTCGAATATTAGACGGTTCTGAAGTTAT 2042
Query 2019 TCACAAATTCAAAGGCTTTAGAAACACATGTAGCCAACTCTCTGCTTCGTATAGCCAAGA 2078
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 2043 TCACAAATTCAAAGGCTTTAGAAACACGTGTAGCCAACTCTCTGCTTCCTATAGCCAAGA 2102
Query 2079 TGGGAAATACATAATATGTGCGAGTGAAGACTCTCAAGTTTACTTATGGAAGAATGACTT 2138
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 2103 TGGGAAATACATAATATGTGCAAGTGAAGACTCTCAGGTTTACTTATGGAAGAATGACTT 2162
Query 2139 TCACCGAACAAGATCAACACTCACGACACAATCTCACGAACATTTTCATTGCAAAGATGT 2198
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2163 TCAACGAACAAGATCAACACTCACGACACAATCTCACGAACACTTTCATTGCAAAGATGT 2222
Query 2199 CTCAGCCGCTGTTCCTTGGCATGGTCATGTTAGAGGTGAGCCACCACCAGTTCAGATTCA 2258
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2223 CTCAGCCGCTGTTCCTTGGCACGGTCATGTTAGAGGTGAGCCACCACCAGTTCAGATTCA 2282
Query 2259 CTCTAAACGCCACTCAAAGCGCATATCTACTTCAAGCCAGCCTTCATCCACCATAAGCTC 2318
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||
Sbjct 2283 TTCTAAACGCCACTCAAAGCGCATATCCACTTCTAGCCAGCCTTCATCCACCATAGGCTC 2342
Query 2319 ACCAACAAAAGAAGAAACCTCGGCGACTGGACCAACTACATCTAACCGGAATAAAAAATC 2378
|||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 2343 ACCAACAAGAGAAGAAACCTCGGCGGCTGCACCAACTACATCTAACCGGAATAAAAAATC 2402
Query 2379 AGGGTTACCTCCAATGCCTAAGAAAGCCGCTACAAAGAGTCAGATTCAACCAGAGGAAGA 2438
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2403 AGGGTTACCTCCTATGCCTAAGAAAGCCGCTACGAAGAGTCAGATTCAACCAGAGGAAGA 2462
Query 2439 GGCAGGACCGGAGCTGGGAAGCAGTGAGTCGTTTCGGTCGAGTATGAACTCTTCGGAGCA 2498
||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||
Sbjct 2463 GGCAGGACCGGAGCTGGGAAGCAGTGAGTCGTTTCGGTCAAGCATGAACTGTTCGGAGCA 2522
Query 2499 GCATTCATCGAGGTTTGGGGAATCTCCATCGATAAACACATCGTCAAGGTTATCTTCTTG 2558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2523 GCATTCATCGAGGTTTGGGGAATCTCCATCGATAAACACATCGTCAAGGTTATCTTCATG 2582
Query 2559 GTCATGGTTCGACAGTGGAGGGCATGGTCCGCAAACTATACAGCCAACGGCTTGGGGGAT 2618
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2583 GTCGTGGTTCGACAGTGGAGGTCATGGTCCGCAAACTATACAGCCAACGGCTTGGGGGAT 2642
Query 2619 GGTGATTGTGACGGCTACAGTTCATGGTGAGATCCGATCTTATCAAAACTTTGGTTTACC 2678
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2643 GGTGATTGTGACGGCTACAGTTCATGGTGAGATCCGATCTTATCAAAATTTTGGTTTACC 2702
Query 2679 GAGAAGAATCGGTCGCCAAACTACTCTGTTTTGA 2712
||||||||||||||||||||||||||||||||||
Sbjct 2703 GAGAAGAATCGGTCGCCAAACTACTCTGTTTTGA 2736
> Ahg359776 jgi|Araly1|359776|fgenesh1_pg.C_scaffold_964000001
Length=1200
Score = 1423 bits (770), Expect = 0.0
Identities = 836/869 (96%), Gaps = 0/869 (0%)
Strand=Plus/Plus
Query 937 ATGGATCTTCGCAAGTTTAATTCGTATCTTTCCAAGAGTGTGAGGTTAAGTAAGAGAAGA 996
||||||||||| |||||||||||||||||||| || || |||||||| ||||||||||||
Sbjct 1 ATGGATCTTCGGAAGTTTAATTCGTATCTTTCGAAAAGCGTGAGGTTGAGTAAGAGAAGA 60
Query 997 GGAGCTGCATTGTTGAAGAACATTAAAGGTGTAGCTCATTCCATGAGTTTACGCGTTGCG 1056
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 61 GGAGCTGCATTGTTGAAGAACATTAAGGGTGTAGCTCATTCCATGAGTTTACGGGTTGCG 120
Query 1057 GATAAAGATGTAAGCGATGGAAGCACTGATAGTCCGAAAAAGGGGAAAGATCATAAACAT 1116
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 121 GATAAAGATGTAAGCGATGGAAGCACCGATAGTCCGAAAAAGGGGAAAGATCATAAGCAT 180
Query 1117 GGTAAAGCTAATGAGTGGGTGAAAGTTAGACCAACAGGGAAATCTTACAAGGAGTTAAGT 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 181 GGTAAAGCTAATGAGTGGGTGAAAGTTAGACCAACAGGGAAATCTTACAAGGAATTAAGT 240
Query 1177 GCTTTACATATGTGTCAAGAGATTCAAGCTCATGAGGGTGCGGTTTGGACTATCAAGTTT 1236
||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 241 GCTTTGCATATGTGTCAAGAGATTCAAGCTCACGAGGGTGCGGTTTGGACTATTAAGTTT 300
Query 1237 AGTCAAGATGCTCATTATCTAGCGAGCGGAGGAGCGGATAGAGTCATTCATGTGTGGGAG 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 301 AGTCAAGATGCTCATTATCTAGCGAGCGGAGGAGCGGATAGAGTCATTCATGTATGGGAG 360
Query 1297 GTTCAAGAATGTGAACTAATGTCTATGAATGAAGGAAGTCTCACTCCTATTCATCCTTCA 1356
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 361 GTTCAAGAATGTGAACTAATGTCTATGAATGAAGGGAGTCTCACTCCTATTCATCCTTCA 420
Query 1357 CTTTGTGACTCTTCTGGAAATGAGATAACTGTGGTAGAGAAGAAAAAGAAAGGAAAGGGA 1416
|||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 421 CTTTGTGACTCTGCTGGAAATGAGATAACTGTGGTAGAGAAGAAAAGGAAAGGAAAAGGC 480
Query 1417 TCATCCGGGAGACGACACAATCATATTCCGGATTACGTACATGTTCCTGAAACAGTCTTC 1476
||||| ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 481 TCATCGGGGAGGCGAAACAATCATATTCCGGATTACGTACATGTTCCTGAAACCGTCTTC 540
Query 1477 TCGTTTTCTGATAAGCCTGTTTGCTCTTTGAAAGGTCATCTGGATGCTATTTTGGATCTT 1536
|| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 541 TCCTTTTCTGATAAGCCTGTTTGCTCTTTGAAAGGTCATTTGGATGCTATTTTGGATCTG 600
Query 1537 TCATGGTCCAAATCTCAGCTTCTTCTTTCATCTTCTATGGACAAAACAGTCAGGTTATGG 1596
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 601 TCATGGTCCAAATCTCAGCTTCTTCTTTCATCTTCCATGGACAAAACAGTCAGGTTATGG 660
Query 1597 GATATAGAAACCAAAACATGTCTCAAACTGTTTGCCCATAATGACTATGTGACATGTATT 1656
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GATCTAGAAACCAAAACATGTCTCAAACTGTTTGCCCATAATGACTATGTGACATGTATC 720
Query 1657 CAGTTCAGTCCAGTGGATGAAAATTATTTCTTAAGTGGTTCACTTGACGCTAAAATAAGG 1716
||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 721 CAGTTTAGCCCAGTGGATGAAAATTATTTCTTAAGTGGTTCACTTGACGCTAAGATAAGG 780
Query 1717 ATATGGAGCATACAAGATCGACATGTTGTGGAATGGAGTGATCTTCATGAAATGGTTACT 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 ATATGGAGCATACAAGATCGACATGTTGTGGAATGGAGTGATCTTCATGAAATGGTTACT 840
Query 1777 GCTGCTTGCTACACACCAGACGGTCAGGG 1805
|||||||||||||| ||||||||||||||
Sbjct 841 GCTGCTTGCTACACTCCAGACGGTCAGGG 869
Score = 560 bits (303), Expect = 2e-158
Identities = 326/337 (97%), Gaps = 1/337 (0%)
Strand=Plus/Plus
Query 2377 TCA-GGGTTACCTCCAATGCCTAAGAAAGCCGCTACAAAGAGTCAGATTCAACCAGAGGA 2435
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 864 TCAGGGGTTACCTCCAATGCCTAAGAAAGCCGCTACGAAGAGTCAGATTCAACCAGAGGA 923
Query 2436 AGAGGCAGGACCGGAGCTGGGAAGCAGTGAGTCGTTTCGGTCGAGTATGAACTCTTCGGA 2495
|||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 924 AGAGACAGGACCGGAGCTGGGAAGCAGTGAGTCGTTTCGGTTGAGTATGAACGGTTCGGA 983
Query 2496 GCAGCATTCATCGAGGTTTGGGGAATCTCCATCGATAAACACATCGTCAAGGTTATCTTC 2555
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 984 GCAGCATTCATCGAGGTTTGGGGAATCGCCATCGATAAACACATCGTCAAGGTTATCTTC 1043
Query 2556 TTGGTCATGGTTCGACAGTGGAGGGCATGGTCCGCAAACTATACAGCCAACGGCTTGGGG 2615
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1044 ATGGTCGTGGTTCGACAGTGGAGGCCATGGTCCGCAAACTATACAGCCAACGGCTTGGGG 1103
Query 2616 GATGGTGATTGTGACGGCTACAGTTCATGGTGAGATCCGATCTTATCAAAACTTTGGTTT 2675
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1104 GATGGTGATTGTGACGGCTACAGTTCATGGTGAGATCCGATCTTATCAAAATTTTGGTTT 1163
Query 2676 ACCGAGAAGAATCGGTCGCCAAACTACTCTGTTTTGA 2712
|||||||||||||||||||||||||||||||||||||
Sbjct 1164 ACCGAGAAGAATCGGTCGCCAAACTACTCTGTTTTGA 1200
> Ahg919251 jgi|Araly1|919251|scaffold_100532.1
Length=516
Score = 671 bits (363), Expect = 0.0
Identities = 425/455 (93%), Gaps = 3/455 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGATGGAAACAAATTGGATCGGAAGAAGACAATGACGATGAACTGGGAAGGATTA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 30 ATGGAAGATGGAAACAAATTGGATCGGAAGAAGACAATGACGATGAACTGGGAAGGATTA 89
Query 61 GGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCT 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 90 GGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCA 149
Query 121 GCTTTAACTTTCGACATGGCTAATGCTTCTTCTTCCGATGAAGATGAAGATTTCGACGAT 180
||| || |||| |||||| || |||||||||||||||||||||||||||||| ||||||
Sbjct 150 GCTCTAGCTTTTGACATGTCTGCTGCTTCTTCTTCCGATGAAGATGAAGATTTTGACGAT 209
Query 181 TGTCGACTCTCGTTTTCTTCAGCCGTCTCTTCCTTAACCACCGCCTCTAGGAAATTTCGT 240
||||| ||||||||||| || ||||| ||||||||||||||||| || |||||||| |||
Sbjct 210 TGTCGTCTCTCGTTTTCCTCCGCCGTTTCTTCCTTAACCACCGCGTCAAGGAAATTGCGT 269
Query 241 ACGCCGGCGATGTCTCCTGATTACGATATTTGGATGGCTGCTCCGGGATCTATATCTGAG 300
|||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 270 ACGCTGGCGATGTCTCCTGATTACGATATTTGGATGGCTGCTCCGGGATCGATATCTGAG 329
Query 301 CGTCGTCGTCGTCTTCTCCATGGGATGGGACTTGCTAGTAATAAAGATATGGTTAGTGCT 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 330 CGTCGTCGTCGTCTTCTCCATGGGATGGGACTTGTTAGTAATAAAGATATGGTTAGTGCT 389
Query 361 GTTTCCATTCGTCGCGTTGTTTCTAATGCGCCTGTTGTTAGTAACGGtgaagaaaagaag 420
||||| |||||||| ||||||||||| ||| ||||||||||||| || ||||| ||||||
Sbjct 390 GTTTCGATTCGTCGTGTTGTTTCTAACGCGGCTGTTGTTAGTAATGGAGAAGATAAGAAG 449
Query 421 atgaagaagaagat---gaatcatgaggttgatga 452
|||||||||||||| |||| ||||||||||||
Sbjct 450 ATGAAGAAGAAGATTATGAATGGTGAGGTTGATGA 484
> Ahg912773 jgi|Araly1|912773|Al_scaffold_0001_3027
Length=363
Score = 538 bits (291), Expect = 8e-152
Identities = 331/351 (94%), Gaps = 0/351 (0%)
Strand=Plus/Plus
Query 1 ATGGAAGATGGAAACAAATTGGATCGGAAGAAGACAATGACGATGAACTGGGAAGGATTA 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 4 ATGGAAGATGGAAACAAATTGGATCGGAAGAAGATAATGACGATGAACTGGGAAGGATTA 63
Query 61 GGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCT 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 GGAGATTTTGAAGATGAAGATGATGATAGATTCTTCGAAACTCATGATCGTCTCTCTTCA 123
Query 121 GCTTTAACTTTCGACATGGCTAATGCTTCTTCTTCCGATGAAGATGAAGATTTCGACGAT 180
||| || |||| |||||| || |||||||||||||||||||||||||||||| ||||||
Sbjct 124 GCTCTAGCTTTTGACATGTCTGCTGCTTCTTCTTCCGATGAAGATGAAGATTTTGACGAT 183
Query 181 TGTCGACTCTCGTTTTCTTCAGCCGTCTCTTCCTTAACCACCGCCTCTAGGAAATTTCGT 240
||||| ||||||||||| || ||||| ||||||||||||||||| || |||||||| |||
Sbjct 184 TGTCGTCTCTCGTTTTCCTCCGCCGTTTCTTCCTTAACCACCGCGTCAAGGAAATTGCGT 243
Query 241 ACGCCGGCGATGTCTCCTGATTACGATATTTGGATGGCTGCTCCGGGATCTATATCTGAG 300
|||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 244 ACGCTGGCGATGTCTCCTGATTACAATATTTGGATGGCTGCTCCGGGATCGATATCTGAG 303
Query 301 CGTCGTCGTCGTCTTCTCCATGGGATGGGACTTGCTAGTAATAAAGATATG 351
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 304 CGTCGTCGTCGTCTTCTCCATGGGATGGGACTTGTTAGTAATAAAGATATG 354
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102310398070
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5