BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G37790.1
Length=1199
Score E
Sequences producing significant alignments: (Bits) Value
Ahg333154 jgi|Araly1|333154|fgenesh1_pm.C_scaffold_68000001 1393 0.0
Ahg915566 jgi|Araly1|915566|Al_scaffold_0008_317 734 0.0
Ahg482783 jgi|Araly1|482783|fgenesh2_kg.4__1843__AT2G37770.2 669 0.0
Ahg485781 jgi|Araly1|485781|fgenesh2_kg.5__1773__AT3G53880.1 667 0.0
> Ahg333154 jgi|Araly1|333154|fgenesh1_pm.C_scaffold_68000001
Length=1053
Score = 1393 bits (754), Expect = 0.0
Identities = 826/862 (96%), Gaps = 0/862 (0%)
Strand=Plus/Plus
Query 75 ATGGCAGAGGAAATTAGATTCTTTGAACTCAACACCGGAGCGAAGATACCATCCGTCGGT 134
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||
Sbjct 1 ATGGCAGAGGAAATTAGATTCTTTGAGCTCAACACTGGAGCGAAGATACCATCCGTTGGT 60
Query 135 CTAGGAACGTGGCAGGCCGATCCTGGTCTCGTCGGAAACGCTGTCGACGCTGCTGTGAAG 194
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 61 CTCGGAACGTGGCAGGCCGATCCTGGTCTCGTCGGAAACGCTGTTGACGCTGCTGTGAAG 120
Query 195 ATTGGTTATCGTCACATTGATTGTGCTCAAATCTATGGCAATGAAAAAGAGATTGGGTTA 254
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 121 ATTGGCTATCGTCACATTGATTGTGCTCAAATCTATGGCAACGAAAAAGAGATTGGGTTA 180
Query 255 GTCCTGAAGAAATTGTTTGATGGTGGAGTTGTTAAGCGTGAGGAAATGTTCATCACATCC 314
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 181 GTCCTGAAGAAATTGTTTGATGATGGAGTTGTTAAGCGTGAGGAAATGTTCATCACATCC 240
Query 315 AAACTATGGTGTACTTATCATGATCCTCAAGAAGTGCCTGAGGCACTTAATAGAACTCTA 374
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 241 AAACTCTGGTGTACTTATCATGATCCTCAAGAAGTGCCTGAGGCACTTAATAGAACTTTA 300
Query 375 CAGGATCTGCAGCTTGACTACGTCGATCTGTATCTCATTCACTGGCCTGTTAGCCTCAAG 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CAGGATCTGCAGCTTGACTACGTCGATCTGTATCTCATTCACTGGCCTGTTAGCCTCAAG 360
Query 435 AAAGGATCTACTGGCTTTAAACCAGAGAACATTTTGCCAACTGATATTCCTAGCACATGG 494
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 AAAGGTTCTACTGGCTTTAAACCAGAGAACATTTTGCCAACTGATATTCCTAGCACATGG 420
Query 495 AAAGCAATGGAATCACTCTTTGATTCAGGCAAGGCCCGTGCTATTGGTGTAAGTAATTTC 554
|||||||||||| ||||||||||| | ||||||||||| ||||||||||| || ||||||
Sbjct 421 AAAGCAATGGAAGCACTCTTTGATGCGGGCAAGGCCCGAGCTATTGGTGTCAGCAATTTC 480
Query 555 TCCTCAAAGAAACTCGCAGATCTCTTGGTGGTGGCTCGTGTTCCTCCCGCTGTTAACCAG 614
|||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||
Sbjct 481 TCCTCAAAGAAACTGGCAGATCTCTTGGCGGTGGCTCGGGTCCCTCCCGCTGTTAACCAA 540
Query 615 GTGGAGTGTCACCCTTCATGGCAACAAAACGTGCTCAGGGATTTCTGCAAATCTAAAGGC 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GTGGAGTGTCACCCTTCATGGCAACAAAACGTGCTCAGGGATTTCTGCAAATCTAAAGGC 600
Query 675 GTTCATCTCTCAGGGTACTCTCCTTTGGGTTCTCCAGGAACAACGTGGCTAACGAGCGAT 734
||||| |||||||| |||||||| |||||||||||||| ||||| ||||||| |||||||
Sbjct 601 GTTCACCTCTCAGGATACTCTCCGTTGGGTTCTCCAGGGACAACATGGCTAAAGAGCGAT 660
Query 735 GTTTTGAAGAACCCTATTCTTGGTGGTGTTGCTGAGAAGCTCGGCAAGACTCCTGCACAG 794
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GTTTTGAAGAACCCTATTCTTGGTGGTGTTGCTGAGAAGCTCGGCAAGACTCCTGCACAA 720
Query 795 GTTGCATTACGCTGGGGTCTCCAAATGGGTCAAAGTGTTCTTCCAAAAAGCACCCATGAA 854
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 721 GTTGCACTACGCTGGGGTCTCCAAATGGGTCAAAGTGTTCTTCCAAAAAGCACACATGAA 780
Query 855 GACAGGATCAAACAGAATTTCGATGTTTTCAACTGGTCCATACCCGAAGACATGTTATCC 914
|||||||||||||||||||| || |||||||| |||||||||||||| ||||||||||||
Sbjct 781 GACAGGATCAAACAGAATTTTGACGTTTTCAATTGGTCCATACCCGATGACATGTTATCC 840
Query 915 AAGTTTTCTGAGATTGGACAGG 936
|||||||||||||||| |||||
Sbjct 841 AAGTTTTCTGAGATTGAACAGG 862
Score = 147 bits (79), Expect = 2e-34
Identities = 83/85 (98%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 933 CAGGGTAGGTTGGTGCGAGGCATGTCATTTGTTCATGAGACGAGTCCATATAAGAGTCTT 992
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 967 CAGGGTAGGTTGGTGCGAGGCATGTCATTTGTTCATGAGACGAGTCCTTATAAGAGTCTT 1026
Query 993 GAAGAACTCTGGGACGGTGAGATAT 1017
|||||||| ||||||||||||||||
Sbjct 1027 GAAGAACTATGGGACGGTGAGATAT 1051
> Ahg915566 jgi|Araly1|915566|Al_scaffold_0008_317
Length=1155
Score = 734 bits (397), Expect = 0.0
Identities = 678/805 (84%), Gaps = 53/805 (7%)
Strand=Plus/Plus
Query 78 GCAGAGGAAATTAGATTCTTTGAA-CTCAACACCGGAGCGAAGATACCATCCGTCGGTCT 136
||||| ||||| |||||| || || |||||||| |||||||||||||||||||| |||||
Sbjct 172 GCAGACGAAATCAGATTC-TTCAAGCTCAACACTGGAGCGAAGATACCATCCGTTGGTCT 230
Query 137 AGGAACGTGGCAGGCCGATCCTGGTCTCGTCGGAAACGCTGTCGACGCTGCTGTGAAGAT 196
||||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||
Sbjct 231 CGGAACGTGGCAGGCCGATCCTGGTCTCGTAGGAAACGCTGTCGAAGCCGCTGTTAAGAT 290
Query 197 TGGTTATCGTCACATTGATTGTGCTCAAATCTATGGCAATGAAAAAGAGATTGGGTTAGT 256
||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 291 TGGTTATAGGCACATTGATTGTGCTCAAATCTATGGCAACGAAAAGGAGATTGGGTTAGT 350
Query 257 CCTGAAGAAATTGTTTGATGGTGGAGTTGTTAAGCGTGAGGAAATGTTCATCACATCCAA 316
|||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 351 CCTGAAGAAACTGTTTGATGATGGAGTTGTTAAGCGTGAGGAAATCTTCATCACATCCAA 410
Query 317 ACTATGGTGTACTTATCATGATCCTCAAGAAGTGCCTGAGGCACTTAATAGAACTCTACA 376
||| || ||||||| |||| |||||||||| ||||| || || || || |||||||||||
Sbjct 411 ACTCTGCTGTACTTCTCATAATCCTCAAGATGTGCCAGATGCTCTGAACAGAACTCTACA 470
Query 377 GGATCTGCAGCTTGACTACGTCGATCTGTATCTCATTCACTGGCCTGTTAGCCTCAAGAA 436
|||||| ||||||||||| |||||| ||||||||||| |||||||||||||||||||| |
Sbjct 471 GGATCTACAGCTTGACTATGTCGATTTGTATCTCATTGACTGGCCTGTTAGCCTCAAGGA 530
Query 437 AGGATCTACTGGCTTTAAACCAGAGAACATTTTGCCAACTGATATTCCTAGCACATGGAA 496
||| || ||||| ||||| |||||||||| |||||||||||||| |||||||||||||||
Sbjct 531 AGGTTCAACTGGTTTTAAGCCAGAGAACAATTTGCCAACTGATACTCCTAGCACATGGAA 590
Query 497 AGCAATGGAATCACTCTTTGAT-T-CAGGCAAGGCCCGTGCTATTGGTGTAAGTAATTTC 554
|| ||||||| ||||| ||||| | | | |||||||| ||||||||||| || ||||||
Sbjct 591 AGAAATGGAAGCACTCGTTGATGTGC-GA-AAGGCCCGAGCTATTGGTGTCAGCAATTTC 648
Query 555 TCCTCAAAGAAACTCGCAGATCTCTTGGTGGTGGCTCGTGTTCCTCCCGCTGTTAACCAG 614
|| |||||| ||||||| | ||||||| ||||||||| || ||||| ||||||||||||
Sbjct 649 TCAACAAAGAGACTCGCAAAGCTCTTGGAGGTGGCTCGCGTCCCTCCTGCTGTTAACCAG 708
Query 615 GTGGAGTGTCACCCTTCATGGCAACAAAACGTGCTCAGGGATTTCTGCAAATCTAAAGGC 674
|||||||||||||| || |||||||||| | || | | ||| || |
Sbjct 709 GTGGAGTGTCACCCATCGTGGCAACAAA-C-TG---A---A-----GCA---CT-----C 747
Query 675 GTTCATCTCTCAGGGTACTCTCCTTTGGGTTCTCCAGGAACAACGTGGCTAACGAGCGAT 734
||||| ||||| || |||||||| ||||||| |||||| ||||||||||| | | |
Sbjct 748 GTTCACCTCTCTGGATACTCTCCGTTGGGTTGTCCAGGGACAACGTGGCT--C-A---A- 800
Query 735 GTTTTGAAGAACCCTATTCTTGG-TGGTGTTGCTGAGAAGCTCGGCAAGACTCCTGCACA 793
| | | ||| ||||| || | | |||||||||| | | | ||||||| ||
Sbjct 801 G-----A-GC-CCC-ATTCTAGGCTCG-GTTGCTGAGA-G---G--A---CTCCTGCGCA 842
Query 794 GGTTGCATTACGCTGGGGTCTCCAAATGGGTCAAAGTGTTCTTCCAAAAAGCACCCATGA 853
||||||||||| ||||||||||||| ||| ||||||||||||||| ||||||| |||||
Sbjct 843 AGTTGCATTACGTTGGGGTCTCCAAAAGGGGCAAAGTGTTCTTCCAGAAAGCACACATGA 902
Query 854 AGACAGGATCAAACAGAATTTCGAT 878
||||| ||||||||||||||| |||
Sbjct 903 AGACACGATCAAACAGAATTTTGAT 927
> Ahg482783 jgi|Araly1|482783|fgenesh2_kg.4__1843__AT2G37770.2
Length=1057
Score = 669 bits (362), Expect = 0.0
Identities = 759/948 (80%), Gaps = 37/948 (4%)
Strand=Plus/Plus
Query 92 ATTCTTTGAACTCAACACCGGAGCGAAGATACCATCCGTCGGTCTAGGAACGTGGCAGGC 151
|||||| || ||||||||||| || ||| | || || || ||||| ||||| ||||| ||
Sbjct 39 ATTCTTCGAGCTCAACACCGGCGCTAAGTTCCCGTCGGTGGGTCTTGGAACATGGCAAGC 98
Query 152 CGATCCTGGTCTCGTCGGAAACGCTGTCGACGCTGCTGTGAAGATTGGTTATCGTCACAT 211
|||||| || || || | || |||| ||| ||| | |||||||| |||||||| ||
Sbjct 99 TTCTCCTGGCCTTGTTGGCGATGCAGTCGCCGCCGCTATTAAGATTGGCTATCGTCATAT 158
Query 212 TGATTGTGCTCAAATCTATGGCAATGAAAAAGAGATTGGGTTAGTCCTGAAGAAATTGTT 271
||||| ||||| ||||||||||| ||||||||||||||| || ||||| ||| ||||
Sbjct 159 AGATTGCGCTCAGATCTATGGCAACGAAAAAGAGATTGGGGCGGTTCTGAAAAAACTGTT 218
Query 272 TGATGGTGGAGTTGTTAAGCGTGAGGAAATGTTCATCACATCCAAACTATGGTGTACTTA 331
||| | |||| || || || ||||| |||||||||| |||||||| ||||||||| |
Sbjct 219 TGAAGACAGAGTAGTGAAACGCGAGGACTTGTTCATCACCTCCAAACTCTGGTGTACTGA 278
Query 332 TCATGATCCTCAAGAAGTGCCTGAGGCACTT-AATAGAACTCTACAGGATCTGCAGCTTG 390
|||||| |||||||| ||||| |||||| || || ||||||||| |||||||||||||||
Sbjct 279 TCATGACCCTCAAGATGTGCCAGAGGCA-TTGAACAGAACTCTAAAGGATCTGCAGCTTG 337
Query 391 ACTACGTCGATCTGTATCTCATTCACTGGCCTGTTA-GCCTCAAGAAAGGATCTACTGGC 449
||||||||||||| ||||| || |||||||||| | | | |||||||| || |||
Sbjct 338 ACTACGTCGATCTTTATCTGATGCACTGGCCTGC-ACGGATGAAGAAAGGTTCCGTTGGA 396
Query 450 TTTAAACCAGAGAACATTTTGCCAACT-GATATTCCTAGCACATGGAAAGCAATGGAATC 508
|||| ||||||||||||||||| | ||||||||||| ||||||||||| |||||| |
Sbjct 397 ATTAAGCCAGAGAACATTTTGCCTG-TAGATATTCCTAGTACATGGAAAGCGATGGAAGC 455
Query 509 ACTCTTTGATTCAGGCAAGGCCCGTGCTATTGGTGTAAGTAATTTCTCCTCAAAGAAACT 568
||||| ||||| |||||||| || || || |||||||| ||||||||| | ||||||||
Sbjct 456 ACTCTACGATTCGGGCAAGGCACGAGCCATAGGTGTAAGCAATTTCTCCACCAAGAAACT 515
Query 569 CGCAGATCTCTTGGTGGTGGCTCGTGTTCCTCCCGCTGTTAACCAGGTGGAGTGTCACCC 628
|| |||||||||| | | |||||||||||||| |||||||| ||||| || ||||| ||
Sbjct 516 AGCTGATCTCTTGGAGTTAGCTCGTGTTCCTCCTGCTGTTAATCAGGTCGAATGTCATCC 575
Query 629 TTCATGGCAACAAAACGT--GCTCAGGGAT-TTCTGCAAATCTAAAGGCGTTCATCTCTC 685
||| |||| ||||| | | ||| | | | ||||||||||| ||||| ||||| | |||
Sbjct 576 TTCTTGGCGACAAA-C-TAAGCT-ACGAAAGTTCTGCAAATCCAAAGGGGTTCA-C-CTC 630
Query 686 AGGG--TACTCTCCTTTGGGTTCTCCAGGAACAACGTGGCT-AACGAGCGATGTTTTGAA 742
|| | ||||| || |||||||||||||| ||||||||||| || |||||||||||||||
Sbjct 631 AGTGCATACTCACCATTGGGTTCTCCAGGGACAACGTGGCTGAA-GAGCGATGTTTTGAA 689
Query 743 GAACCCTATTCTTGG-TG-GTGTTGCTGAGAAGCTCGGCAAGACTCCTGCACAGGTTGCA 800
|||||| || || | | | ||||| || || ||||| |||| |||||| || |||||
Sbjct 690 GAACCCGATACT-GAATACG-GTTGCAGAAAAACTCGGAAAGAGTCCTGCGCAAGTTGCC 747
Query 801 -TTACGCTGGGGTCTCCAAATGGGTCAAAGTGTTCTTCCAAAAAGCACCCATGAAG-ACA 858
|| || ||||| |||||||||||||| ||||| ||||| || || ||| |||||| | |
Sbjct 748 CTT-CGTTGGGGACTCCAAATGGGTCACAGTGTGCTTCCCAAGAGTACCAATGAAGGA-A 805
Query 859 GGATCAAACAGAA-TTTCGATGTTTTCAACTGGTCCATACCCGAAGACATGTTATCCAAG 917
| |||||| |||| ||| ||||||| ||||||| |||||||| |||||||| | |||
Sbjct 806 GAATCAAAGAGAACTTTA-ATGTTTTTGACTGGTCAATACCCGATGACATGTTCGCTAAG 864
Query 918 TTTTCTGAGATTGGACAGGGTAGGTTGGTG-CGAGG--CATGTCATTTGTTCATGAGAC- 973
||||||||||||| ||||| ||||| || | || | | || ||||||||||||||
Sbjct 865 TTTTCTGAGATTGAACAGGCAAGGTTAGTCACT-GGTTCTT-TC-TTTGTTCATGAGACA 921
Query 974 --GAGTCCATATAAGAGTCTTGAAGAACTCTGGGACGGTGAGATATGA 1019
||| || |||||| | |||||||| | ||||| || |||||||||
Sbjct 922 CTGAGCCCTTATAAGTCTATTGAAGAATTATGGGATGGCGAGATATGA 969
> Ahg485781 jgi|Araly1|485781|fgenesh2_kg.5__1773__AT3G53880.1
Length=1006
Score = 667 bits (361), Expect = 0.0
Identities = 781/979 (80%), Gaps = 47/979 (5%)
Strand=Plus/Plus
Query 66 GCTTTGACAATGGCAGAGGAAATTAGATTCTTTGAACTCAACACCGGAGCGAAGATACCA 125
||| |||||||||| || ||||| ||||||| |||||||||||||||| ||||| |||
Sbjct 42 GCTCTGACAATGGCGGACGAAATCGGATTCTTCCAACTCAACACCGGAGCAAAGATCCCA 101
Query 126 TCCGTCGGTCTAGGAACGTGGCAGGCCGATCCTGGTC-TCGTCGGAAACGCTGTCGACGC 184
||||||||||| || || ||||| || | |||||| | |||| ||| |||| |||| |||
Sbjct 102 TCCGTCGGTCTCGGGACATGGCAAGCTGCTCCTGG-CGTCGTTGGAGACGCCGTCGCCGC 160
Query 185 TGCTGTGAAGATTGGTTATC-GTCACATTGATTGTGC-TCAAATCTATGGCAATGAAAAA 242
|||||||||||||| |||| | || ||||||||||| || || |||||||||||||
Sbjct 161 CGCTGTGAAGATTGGATATCAG-CATATTGATTGTGCTTC-AAGATATGGCAATGAAATT 218
Query 243 GAGATTGGGTTAGTCCTGAAGAAATTGTTTGATGGTGGAGTTGTTAAGCGTGAGGAA-AT 301
||||| ||| ||| |||||||| |||||||||| ||| || || |||||||| ||| |
Sbjct 219 GAGATCGGGAAAGTTCTGAAGAAGTTGTTTGATGATGGCGTAGTGAAGCGTGA-GAAGCT 277
Query 302 GTTCATCACATCCAAACTATGG-TGTACTTATCATGATCCTCAAGAAGTGCCTGAGGCAC 360
|||||||||||| ||| | ||| || || ||| |||||||| ||| |||| ||||||
Sbjct 278 GTTCATCACATCAAAAATCTGGTTG-ACAGATCTTGATCCTCCAGATGTGCAAGAGGCA- 335
Query 361 TT-AATAGAACTCTACAGGATCTGCAGCTTGACTACGTCGATCTGTATCTCATTCACTGG 419
|| || |||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 336 TTGAACAGAACTCTACAGGATCTGCAGCTTGATTACGTCGATCTGTATCTCATGCACTGG 395
Query 420 CCTGTTAGCCTCAAGAAAGGATCTACTGGCTTTAAACCAGAGAACATTTTGCC-AACTGA 478
|||||| | | ||||| || || || |||||| || ||||||||| |||| | | ||
Sbjct 396 CCTGTTCGGTTGAAGAAGGGCGCTGTTGACTTTAAGCCTGAGAACATTATGCCTATC-GA 454
Query 479 TATTCCTAGCACATGGAAAGCAATGGAATCACTCTTTGATTCAGGCAAGGCCCGTGCTAT 538
|||||||||||||||||||||||||||| |||| | |||||| |||||| | || || ||
Sbjct 455 TATTCCTAGCACATGGAAAGCAATGGAAGCACTGTATGATTCTGGCAAGACACGAGCCAT 514
Query 539 TGGTGTAAGTAATTTCTCCT-CAAAGAAACTCGCAGATCTCT-TGG-TGGTGGCTCGTGT 595
||| |||||||||||||| | ||||||||||| ||||||| | ||| | || || ||||
Sbjct 515 TGGCGTAAGTAATTTCTC-TACAAAGAAACTCTCAGATCT-TGTGGATACTG-CTTGTGT 571
Query 596 TCCTCCCGCTGTTAACCAGGTGGAGTGTCACCCTTCATGGCAACAAAACGTGCT-CAGGG 654
|||||||||||| ||||||||||| ||||| ||||||||||||||| | ||| || |
Sbjct 572 TCCTCCCGCTGTAAACCAGGTGGAATGTCATCCTTCATGGCAACAACATAAGCTACATG- 630
Query 655 ATTTCTGCAAATCTAAAGGCGTT-CATCTC-TCAGGGTACTCTCCTTTGGGTTCTCCAGG 712
| |||||||| || ||||| | | || || ||||| || || || ||||||||||| ||
Sbjct 631 AGTTCTGCAAGTCCAAAGG-GATACA-CTTGTCAGGATATTCGCCATTGGGTTCTCCTGG 688
Query 713 AACAACGTGGCT-AACGAGC-GATGTTTTGAAGAACCCTATTCTTGG--TGGTGTTGCTG 768
|||||||||| | || | || |||||||| |||| || || ||| |||| | ||
Sbjct 689 AACAACGTGGGTGAA-G-GCCGATGTTTTAAAGAGTCCGGTTATTGAAATGGT-T-GCAA 744
Query 769 A-GAAGCTCGGCAAGACTCCTGCACAGGTTGCA-TTACGCTGGGGTCTCCAAATGGGTCA 826
| ||| ||||| ||| | || ||||| || || || ||||| || |||||||||||
Sbjct 745 AAGAA-CTCGGGAAGTCCCCCGCACAAACCGCTCTT-CGATGGGGACTTCAAATGGGTCA 802
Query 827 AAGTGTTCTTCCAAAAAGCACCCATGAAGACAGGATCAAACAGAATTTCGATGTTTTCA- 885
||| | ||||| |||||||| ||||| | || |||| | ||||||||||||| ||
Sbjct 803 TAGTATACTTCCCAAAAGCACAAATGAAAATAGAATCAGAGAGAATTTCGATGTATTGGG 862
Query 886 ACTGGTCCATACCC-GAAGACATGTTA-TCCAAGTTTTCTGAGATTGGACAGGGTAGGTT 943
| ||||| || | | ||||| ||||| || |||||||| |||| | ||||| ||||||
Sbjct 863 A-TGGTCAAT-CTCAGAAGAAATGTTTGTC-AAGTTTTCCAAGATAGAACAGGTTAGGTT 919
Query 944 GGTGCGAGGCATGTCATTTGTTCATGAGAC---GAGTCCATATAAGAGTCTTGAAGAACT 1000
|| | ||||| || |||||||||||||| |||||| ||||||| |||||||| ||
Sbjct 920 AGTCCAAGGCACATCGTTTGTTCATGAGACATTGAGTCCTTATAAGACACTTGAAGAGCT 979
Query 1001 CTGGGACGGTGAGATATGA 1019
||||| ||||||||||||
Sbjct 980 TTGGGATGGTGAGATATGA 998
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44756304558
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5