BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G37980.1
Length=2180
Score E
Sequences producing significant alignments: (Bits) Value
Ahg482804 jgi|Araly1|482804|fgenesh2_kg.4__1864__AT2G37980.1 3310 0.0
Ahg938326 jgi|Araly1|938326|scaffold_502517.1 1334 0.0
> Ahg482804 jgi|Araly1|482804|fgenesh2_kg.4__1864__AT2G37980.1
Length=2165
Score = 3310 bits (1792), Expect = 0.0
Identities = 2048/2172 (94%), Gaps = 16/2172 (1%)
Strand=Plus/Plus
Query 1 ATGCCTAACCACTACTAACCCTCTAATTCcaaaaacaccaacaaacaaacaaaaaaa-aa 59
|||||||||||||||||||||||||| ||| |||||| |||| |||||| ||||||| |
Sbjct 1 ATGCCTAACCACTACTAACCCTCTAAATCC-AAAACATCAACTAACAAA-AAAAAAACCA 58
Query 60 aacaacctttttt-t-tctctctctctc--aaaaaa-aaaaaaTCAATCCtttttttCAA 114
| | |||||| | | |||||||||| |||||| ||||||||||||| ||| ||||
Sbjct 59 ACCTTTTTTTTTTGTATTTCTCTCTCTCAAAAAAAATAAAAAATCAATCC-TTTATTCAT 117
Query 115 TTTGGCGCTTTTCTAGAGATTGATTTTGTTTCTCAGGCGGCGAGATGTCGGCGGCCGGTG 174
||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 118 TTTGGCGCTTTTCCGGAGATTGATTTTGCTTCTCAGGCGGCGATATGTCGGCGGCCGGTG 177
Query 175 CAAGCCCTTTGGCCGTTGCACCAATCACAGCCCCTACCACCACCACGCGTCGCCGTGTCG 234
|||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||
Sbjct 178 CAAGCCCTTTGGCCGTTGCACCAATCACAGCCCCCACCACCACCACACGCCGCCGTGTCG 237
Query 235 GAGATTCTTTAGAAACCACCTCCGAACGACCTTCCATTTCCTCCGATTACTGCAATACCA 294
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 238 GAGATTCTTTAGAAACCACCTCCGAACGACCTTCCATTTCATCCGATTACTGCAATAATA 297
Query 295 ACACAGTCAACATCGCCATATCACCTGATATAGACGACGGAGAAACAGGTTTGCAAGGCG 354
||||||| |||||||| | || || ||| |||||||||| ||||||||||| |||||||
Sbjct 298 ACACAGTTAACATCGCTGTCTCGCCGGATTTAGACGACGGCGAAACAGGTTTACAAGGCG 357
Query 355 GCGCGTGTTCTTCACCTTCCTCAATTGGTTCCTCCTCTAGCGGATCTCATTACCACCACG 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 GCGCGTGTTCTTCACCTTCCTCAATTGGTTCCTCCTCTAGCGGATCTCATTACCACCACG 417
Query 415 ATCATCACTACCATCATCATCCAACGATTCGGTACTTTCTGCTCCGTAAACTACGGTTAC 474
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 418 ATCATCACTACCATCATCATCCAACGATTCGGTACCTTCTCCTCCGTAAACTACGGTTAC 477
Query 475 CGTTTCTCTTCGACGGTGTTGGATCAACGGCTGTCGTAGGTCAAGGATGGTGGCTCT-GT 533
|||||||||||||||||| ||||||||||||||| || ||||||||||||| || | ||
Sbjct 478 CGTTTCTCTTCGACGGTGGTGGATCAACGGCTGTGGTGGGTCAAGGATGGTT-CTTTTGT 536
Query 534 TCAGGGAGAAACGTGGGTCGTCGGATCTTGGGTCTTCTCATGATCTTCGTCGTCGTTTCT 593
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 537 TCAGGGAGAAACATGGGTCGTCGGATCTTGGGTCTTCTCATGATCCTCGTCGTCGCTTCT 596
Query 594 CTCTTCCTTAGAGTCTCTCTCATGAGTGGGCGCGTCGTTGACCACGCGCACCGGAGAGAT 653
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 597 CTCTTCCTTAGAGTTTCTCTCATGAGTGGGCGCGTCGTTGACCAAGCGCACCGGAGAGAT 656
Query 654 TTGAACGAGCTTGTTGTTATGCGGGCGTTACACGAAGATTGGTCAATGGCTCAACGTGCA 713
||||||||||| || || | ||| |||||||||||||||||||||||||||||||||||
Sbjct 657 TTGAACGAGCTCGTCGTCGTACGGACGTTACACGAAGATTGGTCAATGGCTCAACGTGCA 716
Query 714 ATGACGGAGAATGTCGTCATTGAGAAGCTTCCCATTCCGGAAATATGGCAGAAACCTGAA 773
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 ATGACGGAGAACGTCGTCATTGAGAAGCTTCCCATTCCGGAAATATGGCAGAAACCTGAA 776
Query 774 AGTGGAAATTATCGCCAGTGTGCGTCACGTCCTAAGAACCGTTCAAGGCTGCGTAGGAAA 833
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 777 AACGGAAATTATCGCCAGTGTGCGTCACGTCCTAAGAACCGTTCAAGGCTAAGTAGGAAA 836
Query 834 ACCAACGGTTATCTTTTAGTACACGCGAATGGCGGATTGAATCAGATGAGAACTGGGATA 893
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 ACCAATGGTTATCTTTTAGTACACGCGAATGGCGGATTGAATCAGATGAGAACTGGGATA 896
Query 894 TGTGACATGGTTGCTGCAGCAAAGATTATGAATGCGACTCTTGTTCTTCCTCTACTCGAC 953
||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 897 TGTGACATGGTTGCTGCAGCAAAGATTATGAATGCTACTCTTGTTCTACCTCTCCTCGAC 956
Query 954 CATGAATCTTTCTGGACTGACCCGAGTACTTTCAAAGATATTTTTGACTGGAGACACTTC 1013
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 957 CATGAATCTTTCTGGACTGACCCCAGTACTTTCAAAGATATTTTTGACTGGAGACACTTC 1016
Query 1014 ATGAACGTATTGAAAGATGATGTTGACATTGTCGAGTACTTACCTCCCCGATATGCAGCC 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 ATGAACGTATTGAAAGATGATGTTGACATTGTCGAGTACTTACCTCCCCGATATGCAGCC 1076
Query 1074 ATGAGACCTCTCCTCAAAGCTCCTGTGTCTTGGTCCAAGGCTAGTTACTACAGAAGTGAG 1133
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1077 ATGAGACCTCTCCTCAAGGCTCCTGTTTCTTGGTCCAAGGCTAGTTACTACAGAAGCGAG 1136
Query 1134 ATGTTACCGCTCTTGAAAAAACATAAGGTGATAAAGTTCACACACACTGATTCACGCCTG 1193
||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||||||
Sbjct 1137 ATGTTACCGCTGTTGAAAAAACATAAGGTGGTAAAGTTCACACACACCGATTCGCGCCTG 1196
Query 1194 GCCAACAATGGCTTGCCACCATCAATCCAAAGGCTGAGATGTCGTGCTAATTACCAGGCA 1253
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1197 GCCAACAATGGCTTGCCACCATCAATCCAACGGCTGAGATGTCGTGCTAATTACCAGGCA 1256
Query 1254 TTAGGGTACTCCAAGGAGATTGAGGATTTTGGGAAAGTTCTGGTTAATAGGTTACGAAAC 1313
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1257 TTAGGGTACTCCAAGGAGATTGAGGAGTTTGGGAAAGTTCTGGTTAACCGGTTACGAAAC 1316
Query 1314 AACAGTGAACCTTTCATTGCTTTGCACTTGAGATACGAGAAAGACATGCTTGCCTTTACA 1373
|||||||| || ||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 1317 AACAGTGAGCCCTTCATTGCTCTGCACTTGAGATACGAGAAAGATATGCTTGCCTTTACA 1376
Query 1374 GGCTGCAGCCACAATCTCACAGCTGGGGAAGCTGAAGAGCTGAGAATAATGAGGTACAAT 1433
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1377 GGCTGCAGCCACAATCTCACAGCTGGAGAAGCTGAAGAGCTGAGAATAATGAGGTACAAT 1436
Query 1434 GTTAAACATTGGAAGGAGAAAGAGATTGACAGCAGAGAGAGACGGATCCAAGGCGGTTGC 1493
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1437 GTTAAACATTGGAAGGAGAAAGAGATTGACAGCAGAGAGAGGCGGATTCAAGGCGGTTGC 1496
Query 1494 CCGATGTCTCCTCGAGAAGCAGCCATATTTCTTAAGGCAATGGGATATCCATCCTCGACG 1553
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1497 CCGATGTCTCCTCGAGAAGCAGCCATATTTCTAAAGGCAATGGGATATCCATCCTCGACG 1556
Query 1554 ACTGTATACATAGTTGCTGGTGAAATATATGGAGGAAACAGTATGGATGCTTTTCGAGAA 1613
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1557 ACTGTATACATAGTTGCTGGTGAAATCTATGGAGGAAACAGTATGGATGCTTTTCGAGAA 1616
Query 1614 GAGTACCCAAACGTCTTTGCTCATTCATAC-TTAGCAACTGAGGAAGAGTTAGAGCCCTT 1672
||||||||||||||||| | ||||||| || ||||||||||| |||||||||||||||||
Sbjct 1617 GAGTACCCAAACGTCTTCGATCATTCA-ACCTTAGCAACTGAAGAAGAGTTAGAGCCCTT 1675
Query 1673 TAAGCCATACCAGAACCGGTTAGCTGCGCTGGATTACATTGTGGCACTTGAAAGCGATGT 1732
|||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||
Sbjct 1676 TAAGCCATACCAGAACCGCCTGGCTGCTTTGGATTACATTGTGGCACTTGAAAGCGATGT 1735
Query 1733 TTTTGTATATACATATGATGGGAATATGGCTAAGGCAGTACAAGGGCACCGAAGATTTGA 1792
|||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct 1736 TTTTGTATATACATATGATGGGAATATGGCTAAGGCGGTACAAGGACACCGTAGATTTGA 1795
Query 1793 AGGGTTTAAGAAAACTATCAATCCAGACAGGCTAAATTTTGTAAGACTTATAGATCATTT 1852
|||||||||||| |||||||||||||||||| |||||||||| ||||| |||||||||||
Sbjct 1796 AGGGTTTAAGAAGACTATCAATCCAGACAGGTTAAATTTTGTGAGACTGATAGATCATTT 1855
Query 1853 AGACGAAGGTGTCATGTCATGGGATGAGTTTTCATCAGAGGTGAAGAGATTACATAACAA 1912
|||||| ||||| ||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct 1856 AGACGAGGGTGTAATGTCTTGGGATGAGTTTTCATCAGAAGTAAAGAGATTACATAACAA 1915
Query 1913 CAGGATTGGAGCGCCATATGCGAGACTGCCCGGTGAATTCCCTCGGCTAGAAGAGAATTT 1972
|||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||
Sbjct 1916 CAGGATTGGAGCGCCATATGCGAGACACCCCGGTGAATTTCCTCGGCTAGAGGAGAATTT 1975
Query 1973 CTACGCGAACCCACAACCAGATTGCATATGTAACAAGTCTCAGCCTGAGCAACTTTTGAA 2032
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1976 CTACGCGAACCCACAACCAGATTGCATATGTAACAAGTCTCAGCCTGAGCAACTCTGGAA 2035
Query 2033 ATCAAGAGAGTCAGATAGATGGAGGAAGAGTGCTTCAAGATAGAAGAAAGAAACACAGTG 2092
||||||||||||||||||||||| ||||||||||| ||||||||||||| | ||||||||
Sbjct 2036 ATCAAGAGAGTCAGATAGATGGAAGAAGAGTGCTTGAAGATAGAAGAAA-ATACACAGTG 2094
Query 2093 AACACAAATACAACAACATTGATTCAAACCTTTTTT-AGCCTTCTTGTACAATATAGGAA 2151
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2095 AACACAA-TACAACAACATTGATTCAAACCTTTTTTTAGCCTTCTTGTACAATATAGGAA 2153
Query 2152 AAAGAAGAAGAC 2163
||||||||||||
Sbjct 2154 AAAGAAGAAGAC 2165
> Ahg938326 jgi|Araly1|938326|scaffold_502517.1
Length=1954
Score = 1334 bits (722), Expect = 0.0
Identities = 1110/1297 (86%), Gaps = 28/1297 (2%)
Strand=Plus/Plus
Query 741 CTTCCCATTCCGGAAATATGGCAGAAACCTGAAAGTGGAAATTATCGCCAGTGTGCGTCA 800
||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||| | |
Sbjct 588 CTTCCCATTCCGGAAATTTGGCAGAAACCTGAAAGTGGGAATTACCGCCAATGTGTGGCG 647
Query 801 CGTCCTAAGAACCGTTCAAGGCTGCGTA--GGAAAACCAACGGTTATCTTTTAGTACACG 858
||||| |||||| |||| || ||| | ||||||| || ||||||||||||||||
Sbjct 648 CGTCCCAAGAACTACACAAGACT--GTACCGCCAAACCAATGGGTATCTTTTAGTACACG 705
Query 859 CGAATGGCGGATTGAATCAGATGAGAACTGGGATATGTGACATGGTTGCTGCAGC-AAAG 917
| ||||| |||||||||||||||||||||||||||||||||||||| |||| || |||
Sbjct 706 CAAATGGAGGATTGAATCAGATGAGAACTGGGATATGTGACATGGTCGCTGTTGCCAAA- 764
Query 918 ATTATGAATGCGACTCTTGTTCTTCCTCTACTCGACCATGAATCTTTCTGGACTGACCCG 977
|| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 765 ATCATGAATGCAACTCTTGTTCTTCCTCTGCTTGACCATGAATCTTTCTGGACTGACCCG 824
Query 978 AGTACTTTCAAAGATATTTTTGACTGGAGACACTTCATGAACGTATTGAAAGATGATGTT 1037
|| || |||||||||||||||||||||||| |||||||||||||||||||| | ||||||
Sbjct 825 AGCACGTTCAAAGATATTTTTGACTGGAGAAACTTCATGAACGTATTGAAACACGATGTT 884
Query 1038 GACATTGTCGAGTACTTACCTCCCC-GATATGCAGCCATGAGACCTCTCCTCAAAGCTCC 1096
||||||||||||||||| ||||| | | ||||| || |||| |||||| ||||| || ||
Sbjct 885 GACATTGTCGAGTACTTGCCTCCTCAG-TATGCTGCAATGAAACCTCTTCTCAAGGCCCC 943
Query 1097 TGTGTCTTGGTCCAAGGCTAGTTACTACAGAAGTGAGATGTTACCGCTCTTGAAAAAACA 1156
||| ||||||||||||||||||||||||||||| || ||||| || | |||||| ||
Sbjct 944 TGTTTCTTGGTCCAAGGCTAGTTACTACAGAAGCGAAATGTTGCCATTGTTGAAACGTCA 1003
Query 1157 TAAGGTGATAAAGTTCACACACACTGATTCACGCCTGGCCAACAATGGCTTGCCACCATC 1216
|||||| ||||||||| | ||||| ||||| || || ||||||||||||||||||||
Sbjct 1004 CAAGGTGTTAAAGTTCATGCTTACTGACTCACGGCTTGCTAACAATGGCTTGCCACCATC 1063
Query 1217 AATCCAAAGGCTGAGATGTCGTGCTAATTACCAGGCATTAGGG-TACTCCAAGGAGATTG 1275
|||||| | ||||||||||||||||||||||||||| | | ||| | ||||||||||
Sbjct 1064 GATCCAACGACTGAGATGTCGTGCTAATTACCAGGCACT-GCTATACACAAAGGAGATTG 1122
Query 1276 AGGATTTTGGGAA-AGTTCTGGTTAATAGGTTACGAAACAACAGTGAACCTT-TCATTGC 1333
|||| | ||||| | || | ||||| ||||| ||||| ||||||| |||| | |||||
Sbjct 1123 AGGACCTAGGGAAGATTT-TAGTTAACCGGTTAAGAAACCACAGTGAGCCTTAT-ATTGC 1180
Query 1334 TTTGCACTTGAGATACGAGAAAGACATGCTTGCCTTTACAGGCTGCAGCCACAATCTCAC 1393
| |||| |||||||| ||||| |||||||||||||||||||| |||| ||||||||| ||
Sbjct 1181 TCTGCATTTGAGATATGAGAAGGACATGCTTGCCTTTACAGGATGCAACCACAATCTTAC 1240
Query 1394 AGCTGGGGAAGCTGAAGAGCTGAGAATAATGAGGTACAATGTTAAACATTGGAAGGAGAA 1453
| ||| || ||||||||||||||||| |||||||||| ||| |||||||||||||||||
Sbjct 1241 AACTGAAGATGCTGAAGAGCTGAGAATCATGAGGTACAGTGTCAAACATTGGAAGGAGAA 1300
Query 1454 AGAGATTGACAGCAGAGAGAGACGGATCCAAGGCGGTTGCCCGATGTCTCCTCGAGAAGC 1513
||||||||| ||| ||||||||||||| |||||||| || || |||||||| ||||||||
Sbjct 1301 AGAGATTGATAGCCGAGAGAGACGGATTCAAGGCGGATGTCCAATGTCTCCGCGAGAAGC 1360
Query 1514 AGCCATATTTCTTAA-GGCAATGGGATATCCATCCTCGACGACTGTATACATAGTTGCTG 1572
||| |||||| |||| ||| ||||||||||| ||||| ||||||||||| ||||||||||
Sbjct 1361 AGCTATATTT-TTAAAGGCCATGGGATATCCGTCCTCCACGACTGTATATATAGTTGCTG 1419
Query 1573 GTGAAATATATGGAGGAAACAGTATGGATGCTTTTCGAGAAGAGTACCCAAACGTCTT-T 1631
|||| || |||||| | || |||||||||||||| || | |||||||||||| ||||| |
Sbjct 1420 GTGAGATCTATGGAAGCAAGAGTATGGATGCTTTCCGTGCAGAGTACCCAAATGTCTTCT 1479
Query 1632 GCTCATTCATACT-TAGCAACTGAGGAAGAGTTAGAGCCCTTTAAGCCA-TACCAGAACC 1689
|||||||| ||| | || ||||| |||||||||||||| ||| || || ||||||||||
Sbjct 1480 -CTCATTCA-ACTCTTGCGACTGAAGAAGAGTTAGAGCC-TTTCAGTCAATACCAGAACC 1536
Query 1690 GG-TTAGCTGCGCTGGATTACATTGTGGCACTTGAAAGCGATGTTTTTGTATATACATAT 1748
| || |||||| |||| ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct 1537 GCCTT-GCTGCGTTGGACTACATTGTGGCCCTTGAAAGTGATGTTTTTGTGTATACATAT 1595
Query 1749 GATGGGAATATGGCTAAGGCAGTACAAGGGCACCGAAGATTTGAAGGGTTTAAGAAAACT 1808
||||| |||||||||||||| |||||||||||| |||| || |||||||||| ||| |
Sbjct 1596 GATGGTAATATGGCTAAGGCGGTACAAGGGCACAGAAGGTTCGAAGGGTTTAGGAAGTCC 1655
Query 1809 ATCAATCCAGACAGGCTAAATTTTGTAAGACTTATAGATCATTTAGACGAAGGTGTCATG 1868
|| |||||||||||||| |||||||| ||||| ||||||||||| || || ||| ||||
Sbjct 1656 ATAAATCCAGACAGGCTGAATTTTGTTAGACTGATAGATCATTTTGATGAGGGTATCATA 1715
Query 1869 TCATGGGATGAGTTTTCATCAGAGGTGAAGAGATTACATA-ACAACAGGATTGGAGCGCC 1927
|| ||||| |||||||| || ||||| ||||||||| ||| | | ||||||||||||| |
Sbjct 1716 TCTTGGGAAGAGTTTTCTTCTGAGGTTAAGAGATTAAATAGAGA-CAGGATTGGAGCGGC 1774
Query 1928 ATATGCGAGACTGCCCGGTGAA-TTCCCTCGGCTAGAAGAGAATTTCTACGCGAACCCAC 1986
||||||||||||||| | || | ||||| | ||||| ||||||||||| ||||||||||
Sbjct 1775 ATATGCGAGACTGCCTGCTGCACTTCCCA-GACTAGAGGAGAATTTCTATGCGAACCCAC 1833
Query 1987 AACCAGATTGCATATGTAACAAGTCTCAGCCTGAGCA 2023
|||| |||||||| |||||||||||||| ||||||||
Sbjct 1834 AACCCGATTGCATCTGTAACAAGTCTCATCCTGAGCA 1870
Score = 76.8 bits (41), Expect = 6e-13
Identities = 243/332 (73%), Gaps = 47/332 (14%)
Strand=Plus/Plus
Query 396 GGATCTCATTACCACCACGATCATCACTACC-A---T-C-ATCATCCAACGATTCGGTAC 449
|||||||||||||| ||||||||| || ||| | | | ||||||| ||||||| |||
Sbjct 237 GGATCTCATTACCATCACGATCATTACCACCGATTTTACAATCATCCGGCGATTCGTTAC 296
Query 450 TTTCTGCTCCGTAAACTAC-GG-TTACCGTTTCTCTTCGACGGTGTTGGATCAACGGCTG 507
|||| ||||| ||| | | || || ||| | || |||| |||||| |||| ||
Sbjct 297 CTTCTTCTCCG-AAAATTCTGGATT-CCG----T-TT----GGTGGTGGATCGACGGTTG 345
Query 508 TCG-TAGGTCAAGGATGGTGGCTCT-GTTCAGGGAGAAACGTGGGTCGTCGGATCTTGGG 565
| | | |||||| | ||| | | | || |||||||||||||||||||||||||||||
Sbjct 346 T-GATTGGTCAA-G--GGT---T-TAGATCGGGGAGAAACGTGGGTCGTCGGATCTTGGG 397
Query 566 TCTTCTCATGAT-CTTCGTCGTCGTTTCTCTCTTCCTTAGAGTCT-CTCTCATGAGTGG- 622
|||||| ||| | ||| || || | ||| | || ||||| |||| | || ||| ||||
Sbjct 398 TCTTCTAATGGTGCTT-GTGGTTGCGTCTGTGTTTCTTAGGGTCTAC-CTTATGGGTGGT 455
Query 623 GCGCGTC-G-TTGACCACGCGCACCGGAGAGATTTGAACGAGCTTGTTGTTATGCGGGCG 680
| |||| | |||| ||||| | | |||||||||| ||||||| | | ||
Sbjct 456 GTGCGTGTGGTTGATCACGCTC---G------TTTGAACGAGTTTGTTGTCGTTAGAACG 506
Query 681 -TTACACGAAGATTGGTCAATGGCTCAACGTG 711
|| | || ||||||||||||||||||||||
Sbjct 507 CTT-CGTGACGATTGGTCAATGGCTCAACGTG 537
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82046387730
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5