BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G37980.1 Length=2180 Score E Sequences producing significant alignments: (Bits) Value Ahg482804 jgi|Araly1|482804|fgenesh2_kg.4__1864__AT2G37980.1 3310 0.0 Ahg938326 jgi|Araly1|938326|scaffold_502517.1 1334 0.0 > Ahg482804 jgi|Araly1|482804|fgenesh2_kg.4__1864__AT2G37980.1 Length=2165 Score = 3310 bits (1792), Expect = 0.0 Identities = 2048/2172 (94%), Gaps = 16/2172 (1%) Strand=Plus/Plus Query 1 ATGCCTAACCACTACTAACCCTCTAATTCcaaaaacaccaacaaacaaacaaaaaaa-aa 59 |||||||||||||||||||||||||| ||| |||||| |||| |||||| ||||||| | Sbjct 1 ATGCCTAACCACTACTAACCCTCTAAATCC-AAAACATCAACTAACAAA-AAAAAAACCA 58 Query 60 aacaacctttttt-t-tctctctctctc--aaaaaa-aaaaaaTCAATCCtttttttCAA 114 | | |||||| | | |||||||||| |||||| ||||||||||||| ||| |||| Sbjct 59 ACCTTTTTTTTTTGTATTTCTCTCTCTCAAAAAAAATAAAAAATCAATCC-TTTATTCAT 117 Query 115 TTTGGCGCTTTTCTAGAGATTGATTTTGTTTCTCAGGCGGCGAGATGTCGGCGGCCGGTG 174 ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 118 TTTGGCGCTTTTCCGGAGATTGATTTTGCTTCTCAGGCGGCGATATGTCGGCGGCCGGTG 177 Query 175 CAAGCCCTTTGGCCGTTGCACCAATCACAGCCCCTACCACCACCACGCGTCGCCGTGTCG 234 |||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| Sbjct 178 CAAGCCCTTTGGCCGTTGCACCAATCACAGCCCCCACCACCACCACACGCCGCCGTGTCG 237 Query 235 GAGATTCTTTAGAAACCACCTCCGAACGACCTTCCATTTCCTCCGATTACTGCAATACCA 294 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct 238 GAGATTCTTTAGAAACCACCTCCGAACGACCTTCCATTTCATCCGATTACTGCAATAATA 297 Query 295 ACACAGTCAACATCGCCATATCACCTGATATAGACGACGGAGAAACAGGTTTGCAAGGCG 354 ||||||| |||||||| | || || ||| |||||||||| ||||||||||| ||||||| Sbjct 298 ACACAGTTAACATCGCTGTCTCGCCGGATTTAGACGACGGCGAAACAGGTTTACAAGGCG 357 Query 355 GCGCGTGTTCTTCACCTTCCTCAATTGGTTCCTCCTCTAGCGGATCTCATTACCACCACG 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 GCGCGTGTTCTTCACCTTCCTCAATTGGTTCCTCCTCTAGCGGATCTCATTACCACCACG 417 Query 415 ATCATCACTACCATCATCATCCAACGATTCGGTACTTTCTGCTCCGTAAACTACGGTTAC 474 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 418 ATCATCACTACCATCATCATCCAACGATTCGGTACCTTCTCCTCCGTAAACTACGGTTAC 477 Query 475 CGTTTCTCTTCGACGGTGTTGGATCAACGGCTGTCGTAGGTCAAGGATGGTGGCTCT-GT 533 |||||||||||||||||| ||||||||||||||| || ||||||||||||| || | || Sbjct 478 CGTTTCTCTTCGACGGTGGTGGATCAACGGCTGTGGTGGGTCAAGGATGGTT-CTTTTGT 536 Query 534 TCAGGGAGAAACGTGGGTCGTCGGATCTTGGGTCTTCTCATGATCTTCGTCGTCGTTTCT 593 |||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 537 TCAGGGAGAAACATGGGTCGTCGGATCTTGGGTCTTCTCATGATCCTCGTCGTCGCTTCT 596 Query 594 CTCTTCCTTAGAGTCTCTCTCATGAGTGGGCGCGTCGTTGACCACGCGCACCGGAGAGAT 653 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 597 CTCTTCCTTAGAGTTTCTCTCATGAGTGGGCGCGTCGTTGACCAAGCGCACCGGAGAGAT 656 Query 654 TTGAACGAGCTTGTTGTTATGCGGGCGTTACACGAAGATTGGTCAATGGCTCAACGTGCA 713 ||||||||||| || || | ||| ||||||||||||||||||||||||||||||||||| Sbjct 657 TTGAACGAGCTCGTCGTCGTACGGACGTTACACGAAGATTGGTCAATGGCTCAACGTGCA 716 Query 714 ATGACGGAGAATGTCGTCATTGAGAAGCTTCCCATTCCGGAAATATGGCAGAAACCTGAA 773 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 717 ATGACGGAGAACGTCGTCATTGAGAAGCTTCCCATTCCGGAAATATGGCAGAAACCTGAA 776 Query 774 AGTGGAAATTATCGCCAGTGTGCGTCACGTCCTAAGAACCGTTCAAGGCTGCGTAGGAAA 833 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 777 AACGGAAATTATCGCCAGTGTGCGTCACGTCCTAAGAACCGTTCAAGGCTAAGTAGGAAA 836 Query 834 ACCAACGGTTATCTTTTAGTACACGCGAATGGCGGATTGAATCAGATGAGAACTGGGATA 893 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 837 ACCAATGGTTATCTTTTAGTACACGCGAATGGCGGATTGAATCAGATGAGAACTGGGATA 896 Query 894 TGTGACATGGTTGCTGCAGCAAAGATTATGAATGCGACTCTTGTTCTTCCTCTACTCGAC 953 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| Sbjct 897 TGTGACATGGTTGCTGCAGCAAAGATTATGAATGCTACTCTTGTTCTACCTCTCCTCGAC 956 Query 954 CATGAATCTTTCTGGACTGACCCGAGTACTTTCAAAGATATTTTTGACTGGAGACACTTC 1013 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 957 CATGAATCTTTCTGGACTGACCCCAGTACTTTCAAAGATATTTTTGACTGGAGACACTTC 1016 Query 1014 ATGAACGTATTGAAAGATGATGTTGACATTGTCGAGTACTTACCTCCCCGATATGCAGCC 1073 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1017 ATGAACGTATTGAAAGATGATGTTGACATTGTCGAGTACTTACCTCCCCGATATGCAGCC 1076 Query 1074 ATGAGACCTCTCCTCAAAGCTCCTGTGTCTTGGTCCAAGGCTAGTTACTACAGAAGTGAG 1133 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1077 ATGAGACCTCTCCTCAAGGCTCCTGTTTCTTGGTCCAAGGCTAGTTACTACAGAAGCGAG 1136 Query 1134 ATGTTACCGCTCTTGAAAAAACATAAGGTGATAAAGTTCACACACACTGATTCACGCCTG 1193 ||||||||||| |||||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct 1137 ATGTTACCGCTGTTGAAAAAACATAAGGTGGTAAAGTTCACACACACCGATTCGCGCCTG 1196 Query 1194 GCCAACAATGGCTTGCCACCATCAATCCAAAGGCTGAGATGTCGTGCTAATTACCAGGCA 1253 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1197 GCCAACAATGGCTTGCCACCATCAATCCAACGGCTGAGATGTCGTGCTAATTACCAGGCA 1256 Query 1254 TTAGGGTACTCCAAGGAGATTGAGGATTTTGGGAAAGTTCTGGTTAATAGGTTACGAAAC 1313 |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 1257 TTAGGGTACTCCAAGGAGATTGAGGAGTTTGGGAAAGTTCTGGTTAACCGGTTACGAAAC 1316 Query 1314 AACAGTGAACCTTTCATTGCTTTGCACTTGAGATACGAGAAAGACATGCTTGCCTTTACA 1373 |||||||| || ||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 1317 AACAGTGAGCCCTTCATTGCTCTGCACTTGAGATACGAGAAAGATATGCTTGCCTTTACA 1376 Query 1374 GGCTGCAGCCACAATCTCACAGCTGGGGAAGCTGAAGAGCTGAGAATAATGAGGTACAAT 1433 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1377 GGCTGCAGCCACAATCTCACAGCTGGAGAAGCTGAAGAGCTGAGAATAATGAGGTACAAT 1436 Query 1434 GTTAAACATTGGAAGGAGAAAGAGATTGACAGCAGAGAGAGACGGATCCAAGGCGGTTGC 1493 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1437 GTTAAACATTGGAAGGAGAAAGAGATTGACAGCAGAGAGAGGCGGATTCAAGGCGGTTGC 1496 Query 1494 CCGATGTCTCCTCGAGAAGCAGCCATATTTCTTAAGGCAATGGGATATCCATCCTCGACG 1553 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1497 CCGATGTCTCCTCGAGAAGCAGCCATATTTCTAAAGGCAATGGGATATCCATCCTCGACG 1556 Query 1554 ACTGTATACATAGTTGCTGGTGAAATATATGGAGGAAACAGTATGGATGCTTTTCGAGAA 1613 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1557 ACTGTATACATAGTTGCTGGTGAAATCTATGGAGGAAACAGTATGGATGCTTTTCGAGAA 1616 Query 1614 GAGTACCCAAACGTCTTTGCTCATTCATAC-TTAGCAACTGAGGAAGAGTTAGAGCCCTT 1672 ||||||||||||||||| | ||||||| || ||||||||||| ||||||||||||||||| Sbjct 1617 GAGTACCCAAACGTCTTCGATCATTCA-ACCTTAGCAACTGAAGAAGAGTTAGAGCCCTT 1675 Query 1673 TAAGCCATACCAGAACCGGTTAGCTGCGCTGGATTACATTGTGGCACTTGAAAGCGATGT 1732 |||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| Sbjct 1676 TAAGCCATACCAGAACCGCCTGGCTGCTTTGGATTACATTGTGGCACTTGAAAGCGATGT 1735 Query 1733 TTTTGTATATACATATGATGGGAATATGGCTAAGGCAGTACAAGGGCACCGAAGATTTGA 1792 |||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct 1736 TTTTGTATATACATATGATGGGAATATGGCTAAGGCGGTACAAGGACACCGTAGATTTGA 1795 Query 1793 AGGGTTTAAGAAAACTATCAATCCAGACAGGCTAAATTTTGTAAGACTTATAGATCATTT 1852 |||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct 1796 AGGGTTTAAGAAGACTATCAATCCAGACAGGTTAAATTTTGTGAGACTGATAGATCATTT 1855 Query 1853 AGACGAAGGTGTCATGTCATGGGATGAGTTTTCATCAGAGGTGAAGAGATTACATAACAA 1912 |||||| ||||| ||||| |||||||||||||||||||| || ||||||||||||||||| Sbjct 1856 AGACGAGGGTGTAATGTCTTGGGATGAGTTTTCATCAGAAGTAAAGAGATTACATAACAA 1915 Query 1913 CAGGATTGGAGCGCCATATGCGAGACTGCCCGGTGAATTCCCTCGGCTAGAAGAGAATTT 1972 |||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 1916 CAGGATTGGAGCGCCATATGCGAGACACCCCGGTGAATTTCCTCGGCTAGAGGAGAATTT 1975 Query 1973 CTACGCGAACCCACAACCAGATTGCATATGTAACAAGTCTCAGCCTGAGCAACTTTTGAA 2032 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 1976 CTACGCGAACCCACAACCAGATTGCATATGTAACAAGTCTCAGCCTGAGCAACTCTGGAA 2035 Query 2033 ATCAAGAGAGTCAGATAGATGGAGGAAGAGTGCTTCAAGATAGAAGAAAGAAACACAGTG 2092 ||||||||||||||||||||||| ||||||||||| ||||||||||||| | |||||||| Sbjct 2036 ATCAAGAGAGTCAGATAGATGGAAGAAGAGTGCTTGAAGATAGAAGAAA-ATACACAGTG 2094 Query 2093 AACACAAATACAACAACATTGATTCAAACCTTTTTT-AGCCTTCTTGTACAATATAGGAA 2151 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2095 AACACAA-TACAACAACATTGATTCAAACCTTTTTTTAGCCTTCTTGTACAATATAGGAA 2153 Query 2152 AAAGAAGAAGAC 2163 |||||||||||| Sbjct 2154 AAAGAAGAAGAC 2165 > Ahg938326 jgi|Araly1|938326|scaffold_502517.1 Length=1954 Score = 1334 bits (722), Expect = 0.0 Identities = 1110/1297 (86%), Gaps = 28/1297 (2%) Strand=Plus/Plus Query 741 CTTCCCATTCCGGAAATATGGCAGAAACCTGAAAGTGGAAATTATCGCCAGTGTGCGTCA 800 ||||||||||||||||| |||||||||||||||||||| ||||| ||||| |||| | | Sbjct 588 CTTCCCATTCCGGAAATTTGGCAGAAACCTGAAAGTGGGAATTACCGCCAATGTGTGGCG 647 Query 801 CGTCCTAAGAACCGTTCAAGGCTGCGTA--GGAAAACCAACGGTTATCTTTTAGTACACG 858 ||||| |||||| |||| || ||| | ||||||| || |||||||||||||||| Sbjct 648 CGTCCCAAGAACTACACAAGACT--GTACCGCCAAACCAATGGGTATCTTTTAGTACACG 705 Query 859 CGAATGGCGGATTGAATCAGATGAGAACTGGGATATGTGACATGGTTGCTGCAGC-AAAG 917 | ||||| |||||||||||||||||||||||||||||||||||||| |||| || ||| Sbjct 706 CAAATGGAGGATTGAATCAGATGAGAACTGGGATATGTGACATGGTCGCTGTTGCCAAA- 764 Query 918 ATTATGAATGCGACTCTTGTTCTTCCTCTACTCGACCATGAATCTTTCTGGACTGACCCG 977 || |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 765 ATCATGAATGCAACTCTTGTTCTTCCTCTGCTTGACCATGAATCTTTCTGGACTGACCCG 824 Query 978 AGTACTTTCAAAGATATTTTTGACTGGAGACACTTCATGAACGTATTGAAAGATGATGTT 1037 || || |||||||||||||||||||||||| |||||||||||||||||||| | |||||| Sbjct 825 AGCACGTTCAAAGATATTTTTGACTGGAGAAACTTCATGAACGTATTGAAACACGATGTT 884 Query 1038 GACATTGTCGAGTACTTACCTCCCC-GATATGCAGCCATGAGACCTCTCCTCAAAGCTCC 1096 ||||||||||||||||| ||||| | | ||||| || |||| |||||| ||||| || || Sbjct 885 GACATTGTCGAGTACTTGCCTCCTCAG-TATGCTGCAATGAAACCTCTTCTCAAGGCCCC 943 Query 1097 TGTGTCTTGGTCCAAGGCTAGTTACTACAGAAGTGAGATGTTACCGCTCTTGAAAAAACA 1156 ||| ||||||||||||||||||||||||||||| || ||||| || | |||||| || Sbjct 944 TGTTTCTTGGTCCAAGGCTAGTTACTACAGAAGCGAAATGTTGCCATTGTTGAAACGTCA 1003 Query 1157 TAAGGTGATAAAGTTCACACACACTGATTCACGCCTGGCCAACAATGGCTTGCCACCATC 1216 |||||| ||||||||| | ||||| ||||| || || |||||||||||||||||||| Sbjct 1004 CAAGGTGTTAAAGTTCATGCTTACTGACTCACGGCTTGCTAACAATGGCTTGCCACCATC 1063 Query 1217 AATCCAAAGGCTGAGATGTCGTGCTAATTACCAGGCATTAGGG-TACTCCAAGGAGATTG 1275 |||||| | ||||||||||||||||||||||||||| | | ||| | |||||||||| Sbjct 1064 GATCCAACGACTGAGATGTCGTGCTAATTACCAGGCACT-GCTATACACAAAGGAGATTG 1122 Query 1276 AGGATTTTGGGAA-AGTTCTGGTTAATAGGTTACGAAACAACAGTGAACCTT-TCATTGC 1333 |||| | ||||| | || | ||||| ||||| ||||| ||||||| |||| | ||||| Sbjct 1123 AGGACCTAGGGAAGATTT-TAGTTAACCGGTTAAGAAACCACAGTGAGCCTTAT-ATTGC 1180 Query 1334 TTTGCACTTGAGATACGAGAAAGACATGCTTGCCTTTACAGGCTGCAGCCACAATCTCAC 1393 | |||| |||||||| ||||| |||||||||||||||||||| |||| ||||||||| || Sbjct 1181 TCTGCATTTGAGATATGAGAAGGACATGCTTGCCTTTACAGGATGCAACCACAATCTTAC 1240 Query 1394 AGCTGGGGAAGCTGAAGAGCTGAGAATAATGAGGTACAATGTTAAACATTGGAAGGAGAA 1453 | ||| || ||||||||||||||||| |||||||||| ||| ||||||||||||||||| Sbjct 1241 AACTGAAGATGCTGAAGAGCTGAGAATCATGAGGTACAGTGTCAAACATTGGAAGGAGAA 1300 Query 1454 AGAGATTGACAGCAGAGAGAGACGGATCCAAGGCGGTTGCCCGATGTCTCCTCGAGAAGC 1513 ||||||||| ||| ||||||||||||| |||||||| || || |||||||| |||||||| Sbjct 1301 AGAGATTGATAGCCGAGAGAGACGGATTCAAGGCGGATGTCCAATGTCTCCGCGAGAAGC 1360 Query 1514 AGCCATATTTCTTAA-GGCAATGGGATATCCATCCTCGACGACTGTATACATAGTTGCTG 1572 ||| |||||| |||| ||| ||||||||||| ||||| ||||||||||| |||||||||| Sbjct 1361 AGCTATATTT-TTAAAGGCCATGGGATATCCGTCCTCCACGACTGTATATATAGTTGCTG 1419 Query 1573 GTGAAATATATGGAGGAAACAGTATGGATGCTTTTCGAGAAGAGTACCCAAACGTCTT-T 1631 |||| || |||||| | || |||||||||||||| || | |||||||||||| ||||| | Sbjct 1420 GTGAGATCTATGGAAGCAAGAGTATGGATGCTTTCCGTGCAGAGTACCCAAATGTCTTCT 1479 Query 1632 GCTCATTCATACT-TAGCAACTGAGGAAGAGTTAGAGCCCTTTAAGCCA-TACCAGAACC 1689 |||||||| ||| | || ||||| |||||||||||||| ||| || || |||||||||| Sbjct 1480 -CTCATTCA-ACTCTTGCGACTGAAGAAGAGTTAGAGCC-TTTCAGTCAATACCAGAACC 1536 Query 1690 GG-TTAGCTGCGCTGGATTACATTGTGGCACTTGAAAGCGATGTTTTTGTATATACATAT 1748 | || |||||| |||| ||||||||||| |||||||| ||||||||||| ||||||||| Sbjct 1537 GCCTT-GCTGCGTTGGACTACATTGTGGCCCTTGAAAGTGATGTTTTTGTGTATACATAT 1595 Query 1749 GATGGGAATATGGCTAAGGCAGTACAAGGGCACCGAAGATTTGAAGGGTTTAAGAAAACT 1808 ||||| |||||||||||||| |||||||||||| |||| || |||||||||| ||| | Sbjct 1596 GATGGTAATATGGCTAAGGCGGTACAAGGGCACAGAAGGTTCGAAGGGTTTAGGAAGTCC 1655 Query 1809 ATCAATCCAGACAGGCTAAATTTTGTAAGACTTATAGATCATTTAGACGAAGGTGTCATG 1868 || |||||||||||||| |||||||| ||||| ||||||||||| || || ||| |||| Sbjct 1656 ATAAATCCAGACAGGCTGAATTTTGTTAGACTGATAGATCATTTTGATGAGGGTATCATA 1715 Query 1869 TCATGGGATGAGTTTTCATCAGAGGTGAAGAGATTACATA-ACAACAGGATTGGAGCGCC 1927 || ||||| |||||||| || ||||| ||||||||| ||| | | ||||||||||||| | Sbjct 1716 TCTTGGGAAGAGTTTTCTTCTGAGGTTAAGAGATTAAATAGAGA-CAGGATTGGAGCGGC 1774 Query 1928 ATATGCGAGACTGCCCGGTGAA-TTCCCTCGGCTAGAAGAGAATTTCTACGCGAACCCAC 1986 ||||||||||||||| | || | ||||| | ||||| ||||||||||| |||||||||| Sbjct 1775 ATATGCGAGACTGCCTGCTGCACTTCCCA-GACTAGAGGAGAATTTCTATGCGAACCCAC 1833 Query 1987 AACCAGATTGCATATGTAACAAGTCTCAGCCTGAGCA 2023 |||| |||||||| |||||||||||||| |||||||| Sbjct 1834 AACCCGATTGCATCTGTAACAAGTCTCATCCTGAGCA 1870 Score = 76.8 bits (41), Expect = 6e-13 Identities = 243/332 (73%), Gaps = 47/332 (14%) Strand=Plus/Plus Query 396 GGATCTCATTACCACCACGATCATCACTACC-A---T-C-ATCATCCAACGATTCGGTAC 449 |||||||||||||| ||||||||| || ||| | | | ||||||| ||||||| ||| Sbjct 237 GGATCTCATTACCATCACGATCATTACCACCGATTTTACAATCATCCGGCGATTCGTTAC 296 Query 450 TTTCTGCTCCGTAAACTAC-GG-TTACCGTTTCTCTTCGACGGTGTTGGATCAACGGCTG 507 |||| ||||| ||| | | || || ||| | || |||| |||||| |||| || Sbjct 297 CTTCTTCTCCG-AAAATTCTGGATT-CCG----T-TT----GGTGGTGGATCGACGGTTG 345 Query 508 TCG-TAGGTCAAGGATGGTGGCTCT-GTTCAGGGAGAAACGTGGGTCGTCGGATCTTGGG 565 | | | |||||| | ||| | | | || ||||||||||||||||||||||||||||| Sbjct 346 T-GATTGGTCAA-G--GGT---T-TAGATCGGGGAGAAACGTGGGTCGTCGGATCTTGGG 397 Query 566 TCTTCTCATGAT-CTTCGTCGTCGTTTCTCTCTTCCTTAGAGTCT-CTCTCATGAGTGG- 622 |||||| ||| | ||| || || | ||| | || ||||| |||| | || ||| |||| Sbjct 398 TCTTCTAATGGTGCTT-GTGGTTGCGTCTGTGTTTCTTAGGGTCTAC-CTTATGGGTGGT 455 Query 623 GCGCGTC-G-TTGACCACGCGCACCGGAGAGATTTGAACGAGCTTGTTGTTATGCGGGCG 680 | |||| | |||| ||||| | | |||||||||| ||||||| | | || Sbjct 456 GTGCGTGTGGTTGATCACGCTC---G------TTTGAACGAGTTTGTTGTCGTTAGAACG 506 Query 681 -TTACACGAAGATTGGTCAATGGCTCAACGTG 711 || | || |||||||||||||||||||||| Sbjct 507 CTT-CGTGACGATTGGTCAATGGCTCAACGTG 537 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 82046387730 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5