BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G38255.1
Length=1031
Score E
Sequences producing significant alignments: (Bits) Value
Ahg321526 jgi|Araly1|321526|fgenesh1_pm.C_scaffold_4001583 1297 0.0
Ahg345591 jgi|Araly1|345591|fgenesh1_pg.C_scaffold_4001933 1279 0.0
Ahg345605 jgi|Araly1|345605|fgenesh1_pg.C_scaffold_4001947 861 0.0
Ahg345606 jgi|Araly1|345606|fgenesh1_pg.C_scaffold_4001948 839 0.0
Ahg345604 jgi|Araly1|345604|fgenesh1_pg.C_scaffold_4001946 824 0.0
Ahg345603 jgi|Araly1|345603|fgenesh1_pg.C_scaffold_4001945 433 1e-120
> Ahg321526 jgi|Araly1|321526|fgenesh1_pm.C_scaffold_4001583
Length=996
Score = 1297 bits (702), Expect = 0.0
Identities = 912/1011 (90%), Gaps = 24/1011 (2%)
Strand=Plus/Plus
Query 30 ATGGTTGAAGGAAACGTTGATTCAATTTTACAGGAATTTGATTGTGTTGATATATACAAA 89
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1 ATGGTCGAAGGAAACGTTGATTCAATTTTACAGGAATTTGATTGTGTTGATCTATACAAA 60
Query 90 CAACCCGCTTTCCAACATCCATTGTTGAAAAACCACAAGATTCAGGaaaatttcaatttc 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 61 CAACCCGCTTTCCAACATCCATTGTTGAAAAACCACAAGATTCAGGAAAATTTCAGTTTC 120
Query 150 aataaaagccatattataaaaaataaatataaagaaaatGTTCTAAGTTGTCCACAAGGA 209
||| ||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 121 AATGAAAGCCACAATATAAAAAATAAATATAAAGAAAATGATCTAAGTTGTCCAAAAGGA 180
Query 210 ACAGTTCCAGTTTTAAAACaaaaaaaTGGAACTGAAATCATTCATCTCAACACAGTCGAG 269
||||| ||| |||||||||||| |||||||||||||| | |||||||||||||| |||||
Sbjct 181 ACAGTGCCAATTTTAAAACAAAGAAATGGAACTGAAAGCGTTCATCTCAACACAATCGAG 240
Query 270 TATCCTGGTCAACATTTTGCAACAATCGAGACCGTTTTGGATGGAAGTATCTACCGGGGA 329
||||| || |||||||||||||||||||| ||||||||||||||||| ||||| || |||
Sbjct 241 TATCCCGGCCAACATTTTGCAACAATCGAAACCGTTTTGGATGGAAGCATCTATCGAGGA 300
Query 330 GCAGAATCTATGATAAGTATTCATAATGTAACTGTACA-AAATAACCAATATAGCAAAAG 388
|| ||| ||||||||||| ||||||||||| ||||| | |||||||||||| ||||||||
Sbjct 301 GCTGAAGCTATGATAAGTGTTCATAATGTATCTGTA-AGAAATAACCAATACAGCAAAAG 359
Query 389 TCAAATTTGGTTGGAGAATGGACCTCGAGGTGAACTTAATAGCATACAATTTGGTTGGGC 448
|||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||||||
Sbjct 360 TCAAATTTGGTTAGAGAATGGACCTCGTGGTGAACTCAATAGCATACAAGTTGGTTGGGC 419
Query 449 GGTGCATCCAAGATTATATGGGGATACTTTAACGCGACTTACGATATATTGGACTGCAGA 508
|||||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||
Sbjct 420 GGTGCATCCAAGATTATACGGGGATACTTTGACGCGATTTACAATATATTGGACTGCAGA 479
Query 509 TGGGTATAAGAAAACTGGGTGTTATAATACAAATTGTCCTGGCTTTGTTATTATAAGTCG 568
||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||
Sbjct 480 TGGATATAAGAAAACGGGGTGTTATAATACAAAGTGTCCTGGTTTTGTTATTATAAATCC 539
Query 569 AGTTCC-GCAAATTGGAATCGCTTT-T-AATGAATCCTCTATTTATGGTGGTAAAGGATC 625
|||| | | |||||| ||||| | ||| |||||||||||||||||||||||| | |
Sbjct 540 CTTTCCTGTTA-TTGGAA--GCTTTATTAATAAATCCTCTATTTATGGTGGTAAAGAAAC 596
Query 626 AGTTGTTATCAGACCACAAGTTTTCCAGGATGGTTTCAGTGGAAACTGGGTACTAAAAGA 685
| ||||||||| |||||||||||| |||||||||||||| ||||| |||| ||||||| |
Sbjct 597 ATTTGTTATCATACCACAAGTTTTACAGGATGGTTTCAGCGGAAATTGGGCACTAAAA-A 655
Query 686 CACTGTCATGAACGAAATAGTTGGTTATTGGCCCAAAAAACTATTTACACACTTAAACAA 745
|| | ||| |||||| ||||||||||||||||| ||||||| ||||||||||| ||
Sbjct 656 T-CT-T--TGAT-GAAATAATTGGTTATTGGCCCAAAGAACTATTCACACACTTAAATAA 710
Query 746 AGGAGCTTCTTTGGTGCGATTTGGAGGAAATACTTTTACATCTCCGGATGGAATTAGTCC 805
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 711 AGGAGCTTCTTTGGTGCGATTTGGAGGAAATACTTTTACATCTCCAAATGGAATTAGTCC 770
Query 806 TCCAATGGGAAATGGACATTTTCCGGTTATT-AGCTATTT-TAAAAGTTCACATTATGTT 863
|||||||||||||||||||||||||||| || | || || |||||||||| ||||| ||
Sbjct 771 TCCAATGGGAAATGGACATTTTCCGGTTTTTGA-CT-TTCATAAAAGTTCATATTATATT 828
Query 864 CATGTTAAAGTTAAGAATTCAAATTATCAACTAGTTGATATTGAA-AGCAGGAAAGCAAG 922
||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||||||
Sbjct 829 CATGTTAAAGTGAAGAATTCAAATTATCAACTAGTTGATATTGAAGAT-AGGAGAGCAAG 887
Query 923 G-ATATATGCAGATTCTTACCAATGTTATAGACTATCATACTGGGGTTATTTCAAGTCAA 981
| | ||||||||||||||| || ||||||||| |||||||||||||||||| |||| |||
Sbjct 888 GCA-ATATGCAGATTCTTATCAGTGTTATAGATTATCATACTGGGGTTATTCCAAGCCAA 946
Query 982 CTGGAGTAAG-TTTCTCTTTTGGGGGACCAGGTGGAAAATGTGGTATTTGA 1031
||||||| | ||||||||||||||||||||||||||| |||| |||||||
Sbjct 947 ATGGAGTA-GCTTTCTCTTTTGGGGGACCAGGTGGAAACTGTGATATTTGA 996
> Ahg345591 jgi|Araly1|345591|fgenesh1_pg.C_scaffold_4001933
Length=1035
Score = 1279 bits (692), Expect = 0.0
Identities = 930/1040 (89%), Gaps = 36/1040 (3%)
Strand=Plus/Plus
Query 1 TTCTATCTTCTTATTTGCTTTTTACGCAAATGGTTGAAGGAAACGTTGATTCAATTTTAC 60
|||||||||||||||||||||||||||||||||| ||||||||||||| | |
Sbjct 23 TTCTATCTTCTTATTTGCTTTTTACGCAAATGGTCGAAGGAAACGTTG-----A---T-- 72
Query 61 AGGAATTTGATTGTGTTGATATATACAAACAACCCGCTTTCCAACATCCATTGTTGAAAA 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 A--AATTTGATTGTGTTGATATATACAAACAACCCGCTTTCCAACATCCATTGTTGAAAA 130
Query 121 ACCACAAGATTCAGGaaaatttcaatttcaataaaagccatattataaaaaataaatat- 179
||||||||||||||||||||||| |||||| ||||||| | | |||||| |||||||
Sbjct 131 ACCACAAGATTCAGGAAAATTTCTGTTTCAACGAAAGCCACAATGTAAAAATTAAATATC 190
Query 180 aaagaaaatGTTCTAAGTTGTCCACAAGGAACAGTTCCAGTTTTAAAACaaaaaaaTGGA 239
||| |||||| ||||||||||||| |||||||||| ||| |||||||||||| |||||||
Sbjct 191 AAA-AAAATGATCTAAGTTGTCCAAAAGGAACAGTGCCAATTTTAAAACAAAGAAATGGA 249
Query 240 ACTGAAATCATTCATCTCAACACAGTCGAGTATCCTGGTCAACATTTTGCAACAATCGAG 299
||||||| | ||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 250 ACTGAAAGCGTTCATCTCAACACAGTCGACTATCCCGGCCAACATTTTGCAACAATCGAG 309
Query 300 ACCGTTTTGGATGGAAGTATCTACCGGGGAGCAGAATCTATGATAAGTATTCATAATGTA 359
||||||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||
Sbjct 310 ACCGTTTTGGATGGAAGCATCTATCGGGGAGCAGAAGCTATGATAAGTGTTCATAATGTA 369
Query 360 ACTGTACAAAATAACCAATATAGCAAAAGTCAAATTTGGTTGGAGAATGGACCTCGAGGT 419
|| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||
Sbjct 370 ACAGTACAAAATAACCAATACAGCAAAAGTCAAATTTGGTTAGAGAATGGACCTCGTGGT 429
Query 420 GAACTTAATAGCATACAATTTGGTTGGGCGGTGCATCCAAGATTATATGGGGATACTTTA 479
||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 430 GAACTCAATAGCATACAAATTGGTTGGGCGGTGCATCCAAGATTATACGGGGATACTTTG 489
Query 480 ACGCGACTTACGATATATTGGACTGCAGATGGGTATAAGAAAACTGGGTGTTATAATACA 539
|||||| |||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 490 ACGCGATTTACAATATATTGGACTGCAGATGGATATAAGAAAACGGGGTGTTATAATACA 549
Query 540 AATTGTCCTGGCTTTGTTATTATAAGTCGAGTTCC-GCAAATTGGAATCGCTTT-T-AAT 596
|| |||||||| ||||||||||||| || | |||| | | |||||| ||||| | |||
Sbjct 550 AAGTGTCCTGGTTTTGTTATTATAAATCCATTTCCTGTTA-TTGGAA--GCTTTATTAAT 606
Query 597 GAATCCTCTATTTATGGTGGTAAAGGATCAGTTGTTATCAGACCACAAGTTTTCCAGGAT 656
|||||||||||||||||||||||| | || ||||||||| |||||||||||| ||||||
Sbjct 607 AAATCCTCTATTTATGGTGGTAAAGAAACATTTGTTATCATACCACAAGTTTTACAGGAT 666
Query 657 GGTTTCAGTGGAAACTGGGTACTAAAAGACACTGTCATGAACGAAATAGTTGGTTATTGG 716
|||||||| ||||| |||| ||||||| | || | ||| |||||| |||||||||||
Sbjct 667 GGTTTCAGCGGAAATTGGGCACTAAAA-AT-CT-T--TGAT-GAAATAATTGGTTATTGG 720
Query 717 CCCAAAAAACTATTTACACACTTAAACAAAGGAGCTTCTTTGGTGCGATTTGGAGGAAAT 776
|||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 721 CCCAAAGAACTATTCACACACTTAAATAAAGGAGCTTCTTTGGTGCGATTTGGAGGAAAT 780
Query 777 ACTTTTACATCTCCGGATGGAATTAGTCCTCCAATGGGAAATGGACATTTTCCGGTTATT 836
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 781 ACTTTTACATCTCCAAATGGAATTAGTCCTCCAATGGGAAATGGACATTTTCCGGTTTTT 840
Query 837 -AGCTATTT-TAAAAGTTCACATTATGTTCATGTTAAAGTTAAGAATTCAAATTATCAAC 894
| || || |||||||||| ||||| ||||||||||||| |||||||||||||||||||
Sbjct 841 GA-CT-TTCATAAAAGTTCATATTATATTCATGTTAAAGTGAAGAATTCAAATTATCAAC 898
Query 895 TAGTTGATATTGAA-AGCAGGAAAGCAAGG-ATATATGCAGATTCTTACCAATGTTATAG 952
|||||||||||||| | |||| ||||||| | ||||||||||||||| || ||||||||
Sbjct 899 TAGTTGATATTGAAGAT-AGGAGAGCAAGGCA-ATATGCAGATTCTTATCAGTGTTATAG 956
Query 953 ACTATCATACTGGGGTTATTTCAAGTCAACTGGAGTAAG-TTTCTCTTTTGGGGGACCAG 1011
| |||||||||||||||||| |||| ||| ||||||| | ||||||||||||||||||||
Sbjct 957 ATTATCATACTGGGGTTATTCCAAGCCAAATGGAGTA-GCTTTCTCTTTTGGGGGACCAG 1015
Query 1012 GTGGAAAATGTGGTATTTGA 1031
||||||| |||| |||||||
Sbjct 1016 GTGGAAACTGTGATATTTGA 1035
> Ahg345605 jgi|Araly1|345605|fgenesh1_pg.C_scaffold_4001947
Length=1050
Score = 861 bits (466), Expect = 0.0
Identities = 859/1044 (82%), Gaps = 45/1044 (4%)
Strand=Plus/Plus
Query 4 TATCTTCTTATTTGCTTTTTACGCAAATGGTTGAAGGAAACGTTGATTCAATTTTACAGG 63
|||| |||||||||||||| |||||| ||| | |||| | ||||| | |||||| | |
Sbjct 26 TATCCTCTTATTTGCTTTTAACGCAAGTGGCCGTTGGAAGCATTGATCCTATTTTAAAAG 85
Query 64 AATTT-GATTGTGTTGATATATACAAACAACCCGCTTTCCAACATCCATTGTTGAAAAAC 122
|||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||
Sbjct 86 -ATTTCGATTGTGTTGATATATACAAACAACCGGCTTTTCAACATCCATTGTTGAAACAC 144
Query 123 CACAAGATTCAGG-aaaatttcaatttc-aata-aaagccatattataaaaaat-aa-at 177
||||||||||||| ||||||| || ||| || | |||| | || | |||| || || ||
Sbjct 145 CACAAGATTCAGGAAAAATTT-AA-TTCGAA-AGAAAGGCTTAGAAGAAAAGATGAATAT 201
Query 178 -at-aaagaaaatGTTCTAAGTTGTCCACAAGGAACAGTTCCAGTTTTAAAACaaaaaaa 235
|| ||| ||||| | |||||||||| ||||||| || ||| |||||| ||||| |||
Sbjct 202 CATCAAA-CAAATGATAAAAGTTGTCCAAAAGGAACTGTACCAATTTTAAGACAAACAAA 260
Query 236 TGGAACTGAAATCATTCATCTCAACACAGTCGAGTATCCTGGTCAACATTTTGCAACAAT 295
||||| ||| | | |||||||| ||||| |||| ||||| || |||||||||||| |||
Sbjct 261 TGGAATTGAGAGCGTTCATCTCGACACACTCGAATATCCCGGCCAACATTTTGCAGTAAT 320
Query 296 CGAGACCGTTTTGGATGGAAGTATCTACCGGGGAGCAGAATCTATGATAAGTATTCATAA 355
||| | ||||| ||||| || ||||| || ||||||| | |||||||||||||||||||
Sbjct 321 CGAAAATGTTTTAGATGGGAGCATCTATCGAGGAGCAGGAGCTATGATAAGTATTCATAA 380
Query 356 TGTAACTGTACAAAATAACCAATATAGCAAAAGTCAAATTTGGTTGGAGAATGGACCTCG 415
| ||||| ||||||||||||||||||| |||| |||||| ||||| ||||||||||||||
Sbjct 381 TTTAACTCTACAAAATAACCAATATAGTAAAAATCAAATCTGGTTAGAGAATGGACCTCG 440
Query 416 AGGTGAACTTAATAGCATACAATTTGGTTGGGCGGTGCATCCAAGATTATATGGGGATAC 475
| | |||| || |||||||||||||||| |||||| ||||||||||||||||| || ||
Sbjct 441 TGATCAACTCAACAGCATACAATTTGGTTTGGCGGTACATCCAAGATTATATGGCGACAC 500
Query 476 TTTAACGCGACTTACGATATATTGGACTGCAGATGGGTATAAGAA-AACTGGGTGTTATA 534
||| ||||| |||| |||||||||||||||||||| ||||| || |||||| || ||||
Sbjct 501 TTTCACGCGGTTTACAATATATTGGACTGCAGATGGCTATAA-AAGAACTGGATGCTATA 559
Query 535 ATACAAATTGTCCTGGCTTTGTTATTATAAGTCGAGTTCCGC-AAATTGGAATC-GCTTT 592
||||||| ||||||||||| ||| | | ||||||||| | || |||| | | ||
Sbjct 560 ATACAAAATGTCCTGGCTTCATTACTGTTTCTCGAGTTCC-CTTGATAGGAA-CAACGTT 617
Query 593 TAATGAATCCTCTATTTATGGTGGTAAAGGATCAGTTGTTATC-AGACCACAAGTTTTCC 651
|||||| || ||| ||||||||||||||| | ||||| ||| | | ||| |||||||| |
Sbjct 618 TAATGATTCTTCTGTTTATGGTGGTAAAGAAACAGTTTTTA-CTAAACCGCAAGTTTTTC 676
Query 652 AGGATGGTTTCAGTGGAAACTGGGTACTAAAAGACACTGTCATGAACGAA-ATAGTTGGT 710
||||||||||||||||||| |||||||| || | | | | ||| ||||| || |||||
Sbjct 677 AGGATGGTTTCAGTGGAAATTGGGTACT--AA-A-ATTAT-ATG-ACGAAGTTA-TTGGT 729
Query 711 TATTGGCCCAAAAAACTATTTACACACTTAAACAAAGGAGCTTCTTTGGTGCGATTTGGA 770
|| ||||| ||| | ||||||| |||||||| ||||||| ||||||||| || ||||||
Sbjct 730 TACTGGCCTAAAGAGTTATTTACTCACTTAAATAAAGGAGTTTCTTTGGTACGTTTTGGA 789
Query 771 GGAAATACTTTTACATCTCCGGATGGAATTAGTCCTCCAATGGGAAATGGACATTTTCCG 830
|||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 790 GGAAATACATTTCCATCTCCGGAGGGAATTAGTCCTCCAATGGGAAATGGCCATTTTCCA 849
Query 831 GTTATTAG-CTATTTTAAAAGTTCACATTATGTTCA--TGTTAAAGTTAAGAATTCAAAT 887
|||| | | |||| ||||||| |||||| | |||| ||| |||||||||||||| ||
Sbjct 850 GTTA-TCGACTATCATAAAAGTGCACATT-T-TTCATTTGTCAAAGTTAAGAATTCGAAC 906
Query 888 TATC-AA-CTAGTTGATATTGAAAG-CAGGAAAGCAAGGA-TATATGCAGATTCTTACCA 943
|||| || | | | ||||||| ||| | |||| ||| || | |||||||||||||||||
Sbjct 907 TATCAAAGC-A-TCGATATTG-AAGATAAGAAAACAA-GACTTTATGCAGATTCTTACCA 962
Query 944 ATGTTATAGACTATCATACTGGGGTTATTTCAAGTC-AACTGGAGTAAGTTTCTCTTTTG 1002
||||||||||||| | || ||||||||| |||||| || ||| ||| ||||| ||||
Sbjct 963 ATGTTATAGACTAACGTATTGGGGTTATAGCAAGTCGAA-TGGGGTATCCTTCTCCTTTG 1021
Query 1003 GGGGACCAGGTGGAAAATGTGGTA 1026
| |||||||||||||| |||||||
Sbjct 1022 GAGGACCAGGTGGAAATTGTGGTA 1045
> Ahg345606 jgi|Araly1|345606|fgenesh1_pg.C_scaffold_4001948
Length=1050
Score = 839 bits (454), Expect = 0.0
Identities = 855/1044 (82%), Gaps = 45/1044 (4%)
Strand=Plus/Plus
Query 4 TATCTTCTTATTTGCTTTTTACGCAAATGGTTGAAGGAAACGTTGATTCAATTTTACAGG 63
|||| |||||||||||||| |||||| ||| || |||| | ||||| | |||||| | |
Sbjct 26 TATCCTCTTATTTGCTTTTAACGCAAGTGGCTGTTGGAAGCATTGATCCTATTTTAAAAG 85
Query 64 AATTT-GATTGTGTTGATATATACAAACAACCCGCTTTCCAACATCCATTGTTGAAAAAC 122
|||| |||||||||||||||||||||||||| ||||| |||||||||||||||||| ||
Sbjct 86 -ATTTCGATTGTGTTGATATATACAAACAACCGGCTTTTCAACATCCATTGTTGAAACAC 144
Query 123 CACAAGATTCAGGaaaatttcaatttc-aata-aaagccatattataaaaaat-aa-at- 177
|||||||| ||| |||| ||||| ||| || | |||| | || | |||| || || ||
Sbjct 145 CACAAGATCCAGAAAAAATTCAA-TTCGAA-AGAAAGGCTTAGAAGAAAAGATGAATATC 202
Query 178 at-aaagaaaatGTTCTAAGTTGTCCACAAGGAACAGTTCCAGTTTTAAAACaaaaaaaT 236
|| ||| ||||| | |||||||||| ||||||| || ||| |||||| ||||| ||||
Sbjct 203 ATCAAA-CAAATGATAAAAGTTGTCCAAAAGGAACTGTACCAATTTTAAGACAAAGAAAT 261
Query 237 GGAACTGAAATCATTCATCTCAACACAGTCGAGTATCCTGGTCAACATTTTGCAACAATC 296
|||| ||| | | |||||||| ||||| |||| ||||| || |||||||||||| |||
Sbjct 262 GGAATTGAGAGCGTTCATCTCGACACACTCGAATATCCCGGCCAACATTTTGCAGTGATC 321
Query 297 GAGACCGTTTTGGATGGAAGTATCTACCGGGGAGCAGAATCTATGATAAGTATTCATAAT 356
|| | ||||| ||||| || ||||| || ||||| | | ||| ||||||||||||||||
Sbjct 322 GAAAATGTTTTAGATGGGAGCATCTATCGAGGAGCGGGAGCTAAGATAAGTATTCATAAT 381
Query 357 GTAACTGTACAAAATAACCAATATAGCAA-AAGTCAAATTTGGTTGGAGAATGGACCTCG 415
||||| ||||||||||||||||||| || || |||||| ||||| ||||||||||||||
Sbjct 382 TTAACTCTACAAAATAACCAATATAGTAATAA-TCAAATCTGGTTAGAGAATGGACCTCG 440
Query 416 AGGTGAACTTAATAGCATACAATTTGGTTGGGCGGTGCATCCAAGATTATATGGGGATAC 475
| | |||| || |||||||||||||||| |||||| ||||||||||||||||| || ||
Sbjct 441 TGATCAACTCAACAGCATACAATTTGGTTTGGCGGTACATCCAAGATTATATGGCGACAC 500
Query 476 TTTAACGCGACTTACGATATATTGGACTGCAGATGGGTATAAGAA-AACTGGGTGTTATA 534
||| ||||| |||| |||||||||||||||||||| ||||| || |||||| || ||||
Sbjct 501 TTTCACGCGGTTTACAATATATTGGACTGCAGATGGCTATAA-AAGAACTGGATGCTATA 559
Query 535 ATACAAATTGTCCTGGCTTTGTTATTATAAGTCGAGTTCCGC-AAATTGGAATC-GCTTT 592
||||||| ||||||||||| ||| | | ||||||||| | || |||| | | ||
Sbjct 560 ATACAAAATGTCCTGGCTTCATTACTGTTTCTCGAGTTCC-CTTGATAGGAA-CAACGTT 617
Query 593 TAATGAATCCTCTATTTATGGTGGTAAAGGATCAGTTGTTATC-AGACCACAAGTTTTCC 651
|||||| || ||| ||||||||||||||| | ||||| ||| | | ||| |||||||| |
Sbjct 618 TAATGATTCTTCTGTTTATGGTGGTAAAGAAACAGTTTTTA-CTAAACCGCAAGTTTTTC 676
Query 652 AGGATGGTTTCAGTGGAAACTGGGTACTAAAAGACACTGTCATGAACGAA-ATAGTTGGT 710
||||||||||||||||||| |||||||| || | | | | ||| ||||| || |||||
Sbjct 677 AGGATGGTTTCAGTGGAAATTGGGTACT--AA-A-ATTAT-ATG-ACGAAGTTA-TTGGT 729
Query 711 TATTGGCCCAAAAAACTATTTACACACTTAAACAAAGGAGCTTCTTTGGTGCGATTTGGA 770
|| ||||| ||| | ||||||| |||||||| ||||||| ||||||||| || ||||||
Sbjct 730 TACTGGCCTAAAGAGTTATTTACTCACTTAAATAAAGGAGTTTCTTTGGTACGTTTTGGA 789
Query 771 GGAAATACTTTTACATCTCCGGATGGAATTAGTCCTCCAATGGGAAATGGACATTTTCCG 830
|||||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 790 GGAAATACATTTCCATCTCCGGAGGGAATTAGTCCTCCAATGGGAAATGGCCATTTTCCA 849
Query 831 GTTATTAG-CTATTTTAAAAGTTCACATTATGTTCA--TGTTAAAGTTAAGAATTCAAAT 887
|||| | | |||| ||||||| |||||| | |||| ||| |||||||||||||| ||
Sbjct 850 GTTA-TCGACTATCATAAAAGTGCACATT-T-TTCATTTGTCAAAGTTAAGAATTCGAAC 906
Query 888 TATC-AA-CTAGTTGATATTGAAAG-CAGGAAAGCAAGGA-TATATGCAGATTCTTACCA 943
|||| || | | | ||||||| ||| | |||| ||| || | |||||||||||||||||
Sbjct 907 TATCAAAGC-A-TCGATATTG-AAGATAAGAAAACAA-GACTTTATGCAGATTCTTACCA 962
Query 944 ATGTTATAGACTATCATACTGGGGTTATTTCAAGTC-AACTGGAGTAAGTTTCTCTTTTG 1002
||||||||||||| | || ||||||||| |||||| || ||| ||| ||||| ||||
Sbjct 963 ATGTTATAGACTAACGTATTGGGGTTATAGCAAGTCGAA-TGGGGTATCCTTCTCCTTTG 1021
Query 1003 GGGGACCAGGTGGAAAATGTGGTA 1026
| |||||||||||||| |||||||
Sbjct 1022 GAGGACCAGGTGGAAATTGTGGTA 1045
> Ahg345604 jgi|Araly1|345604|fgenesh1_pg.C_scaffold_4001946
Length=3081
Score = 824 bits (446), Expect = 0.0
Identities = 817/991 (82%), Gaps = 45/991 (5%)
Strand=Plus/Plus
Query 54 ATTTTACAGGAATTT-GATTGTGTTGATATATACAAACAACCCGCTTTCCAACATCCATT 112
|||||| | | |||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 532 ATTTTAAAAG-ATTTCGATTGTGTTGATATATACAAACAACCGGCTTTTCAACATCCATT 590
Query 113 GTTGAAAAACCACAAGATTCAGG-aaaatttcaatttc-aata-aaagccatattataaa 169
||||||| ||||||||||||||| ||||||| || ||| || | |||| | || | |||
Sbjct 591 GTTGAAACACCACAAGATTCAGGAAAAATTT-AA-TTCGAA-AGAAAGGCTTAGAAGAAA 647
Query 170 aaat-aa-at-at-aaagaaaatGTTCTAAGTTGTCCACAAGGAACAGTTCCAGTTTTAA 225
| || || || || ||| ||||| | |||||||||| ||||||| || ||| ||||||
Sbjct 648 AGATGAATATCATCAAA-CAAATGATAAAAGTTGTCCAAAAGGAACTGTACCAATTTTAA 706
Query 226 AACaaaaaaaTGGAACTGAAATCATTCATCTCAACACAGTCGAGTATCCTGGTCAACATT 285
||||| |||||||| ||| | | |||||||| ||||| |||| ||||| || |||||||
Sbjct 707 GACAAACAAATGGAATTGAGAGCGTTCATCTCGACACACTCGAATATCCCGGCCAACATT 766
Query 286 TTGCAACAATCGAGACCGTTTTGGATGGAAGTATCTACCGGGGAGCAGAATCTATGATAA 345
||||| |||||| | ||||| ||||| || ||||| || ||||||| | |||||||||
Sbjct 767 TTGCAGTAATCGAAAATGTTTTAGATGGGAGCATCTATCGAGGAGCAGGAGCTATGATAA 826
Query 346 GTATTCATAATGTAACTGTACAAAATAACCAATATAGCAAAAGTCAAATTTGGTTGGAGA 405
||||||||||| ||||| ||||||||||||||||||| |||| |||||| ||||| ||||
Sbjct 827 GTATTCATAATTTAACTCTACAAAATAACCAATATAGTAAAAATCAAATCTGGTTAGAGA 886
Query 406 ATGGACCTCGAGGTGAACTTAATAGCATACAATTTGGTTGGGCGGTGCATCCAAGATTAT 465
|||||||||| | | |||| || |||||||||||||||| |||||| |||||||||||||
Sbjct 887 ATGGACCTCGTGATCAACTCAACAGCATACAATTTGGTTTGGCGGTACATCCAAGATTAT 946
Query 466 ATGGGGATACTTTAACGCGACTTACGATATATTGGACTGCAGATGGGTATAAGAA-AACT 524
|||| || ||||| ||||| |||| |||||||||||||||||||| ||||| || ||||
Sbjct 947 ATGGCGACACTTTCACGCGGTTTACAATATATTGGACTGCAGATGGCTATAA-AAGAACT 1005
Query 525 GGGTGTTATAATACAAATTGTCCTGGCTTTGTTATTATAAGTCGAGTTCCGC-AAATTGG 583
|| || ||||||||||| ||||||||||| ||| | | ||||||||| | || ||
Sbjct 1006 GGATGCTATAATACAAAATGTCCTGGCTTCATTACTGTTTCTCGAGTTCC-CTTGATAGG 1064
Query 584 AATC-GCTTTTAATGAATCCTCTATTTATGGTGGTAAAGGATCAGTTGTTATC-AGACCA 641
|| | | |||||||| || ||| ||||||||||||||| | ||||| ||| | | |||
Sbjct 1065 AA-CAACGTTTAATGATTCTTCTGTTTATGGTGGTAAAGAAACAGTTTTTA-CTAAACCG 1122
Query 642 CAAGTTTTCCAGGATGGTTTCAGTGGAAACTGGGTACTAAAAGACACTGTCATGAACGAA 701
|||||||| |||||||||||||||||||| |||||||| || | | | | ||| |||||
Sbjct 1123 CAAGTTTTTCAGGATGGTTTCAGTGGAAATTGGGTACT--AA-A-ATTAT-ATG-ACGAA 1176
Query 702 -ATAGTTGGTTATTGGCCCAAAAAACTATTTACACACTTAAACAAAGGAGCTTCTTTGGT 760
|| ||||||| ||||| ||| | ||||||| |||||||| ||||||| |||||||||
Sbjct 1177 GTTA-TTGGTTACTGGCCTAAAGAGTTATTTACTCACTTAAATAAAGGAGTTTCTTTGGT 1235
Query 761 GCGATTTGGAGGAAATACTTTTACATCTCCGGATGGAATTAGTCCTCCAATGGGAAATGG 820
|| |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1236 ACGTTTTGGAGGAAATACATTTCCATCTCCGGAGGGAATTAGTCCTCCAATGGGAAATGG 1295
Query 821 ACATTTTCCGGTTATTAG-CTATTTTAAAAGTTCACATTATGTTCA--TGTTAAAGTTAA 877
|||||||| |||| | | |||| ||||||| |||||| | |||| ||| ||||||||
Sbjct 1296 CCATTTTCCAGTTA-TCGACTATCATAAAAGTGCACATT-T-TTCATTTGTCAAAGTTAA 1352
Query 878 GAATTCAAATTATC-AA-CTAGTTGATATTGAAAG-CAGGAAAGCAAGGA-TATATGCAG 933
|||||| || |||| || | | | ||||||| ||| | |||| ||| || | |||||||
Sbjct 1353 GAATTCGAACTATCAAAGC-A-TCGATATTG-AAGATAAGAAAACAA-GACTTTATGCAG 1408
Query 934 ATTCTTACCAATGTTATAGACTATCATACTGGGGTTATTTCAAGTC-AACTGGAGTAAGT 992
||||||||||||||||||||||| | || ||||||||| |||||| || ||| |||
Sbjct 1409 ATTCTTACCAATGTTATAGACTAACGTATTGGGGTTATAGCAAGTCGAA-TGGGGTATCC 1467
Query 993 TTCTCTTTTGGGGGACCAGGTGGAAAATGTG 1023
||||| ||||| |||||||||||||| ||||
Sbjct 1468 TTCTCCTTTGGAGGACCAGGTGGAAATTGTG 1498
Score = 808 bits (437), Expect = 0.0
Identities = 816/994 (82%), Gaps = 45/994 (5%)
Strand=Plus/Plus
Query 54 ATTTTACAGGAATTTGATTGTGTTGATATATACAAACAACCCGCTTTCCAACATCCATTG 113
|||||| | || |||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct 2107 ATTTTAAAAGATTTTGATTGTGTTGATATATATAAACAACCGGCTTTTCAACATCCATTG 2166
Query 114 TTGAAAAACCACAAGATTCAGG-aaaatttcaatttc-aata-aaagccatattataaaa 170
|||||| |||||||||| |||| |||| || || ||| || | |||| | || | ||||
Sbjct 2167 TTGAAACACCACAAGATCCAGGAAAAAATT-AA-TTCGAA-AGAAAGGCTTAGAAGAAAA 2223
Query 171 aat-aa-at-at-aaagaaaatGTTCTAAGTTGTCCACAAGGAACAGTTCCAGTTTTAAA 226
|| || || || ||| |||| | |||||||||| ||||||| || ||| ||||||
Sbjct 2224 GATGAATATCATCAAA-CAAATAATAAAAGTTGTCCAAAAGGAACTGTACCAATTTTAAG 2282
Query 227 ACaaaaaaaTGGAACTGAAATCATTCATCTCAACACAGTCGAGTATCCTGGTCAACATTT 286
||||| |||||||| ||| | | |||||||| ||||| |||| ||||| || ||||||||
Sbjct 2283 ACAAACAAATGGAATTGAGAGCGTTCATCTCGACACACTCGAATATCCCGGCCAACATTT 2342
Query 287 TGCAACAATCGAGACCGTTTTGGATGGAAGTATCTACCGGGGAGCAGAATCTATGATAAG 346
|||| |||||| | ||||| ||||| || ||||| || ||||||| | ||||||||||
Sbjct 2343 TGCAGTAATCGAAAATGTTTTAGATGGGAGCATCTATCGAGGAGCAGGAGCTATGATAAG 2402
Query 347 TATTCATAATGTAACTGTACAAAATAACCAATATAGCAAAAGTCAAATTTGGTTGGAGAA 406
|||||||||| ||||| ||||||||||||||||||| |||| |||||| ||||| |||||
Sbjct 2403 TATTCATAATTTAACTCTACAAAATAACCAATATAGTAAAAATCAAATCTGGTTAGAGAA 2462
Query 407 TGGACCTCGAGGTGAACTTAATAGCATACAATTTGGTTGGGCGGTGCATCCAAGATTATA 466
||||||||| | | |||| || |||||||||||||||| |||||| ||||||||||||||
Sbjct 2463 TGGACCTCGTGATCAACTCAACAGCATACAATTTGGTTTGGCGGTACATCCAAGATTATA 2522
Query 467 TGGGGATACTTTAACGCGACTTACGATATATTGGACTGCAGATGGGTATAAGAA-AACTG 525
||| || ||||| ||||| |||| |||||||||||||||||||| ||||| || |||||
Sbjct 2523 TGGCGACACTTTCACGCGGTTTACAATATATTGGACTGCAGATGGCTATAA-AAGAACTG 2581
Query 526 GGTGTTATAATACAAATTGTCCTGGCTTTGTTATTATAAGTCGAGTTCCGC-AAATTGGA 584
| || ||||||||||| ||||||||||| ||| | | ||||||||| | || |||
Sbjct 2582 GATGCTATAATACAAAATGTCCTGGCTTCATTACTGTTTCTCGAGTTCC-CTTGATAGGA 2640
Query 585 ATC-GCTTTTAATGAATCCTCTATTTATGGTGGTAAAGGATCAGTTGTTATC-AGACCAC 642
| | | |||||||| || ||| ||||||||||||||| | ||||| ||| | | ||| |
Sbjct 2641 A-CAACGTTTAATGATTCTTCTGTTTATGGTGGTAAAGAAACAGTTTTTA-CTAAACCGC 2698
Query 643 AAGTTTTCCAGGATGGTTTCAGTGGAAACTGGGTACTAAAAGACACTGT-CATGAACGAA 701
||||||| |||||||||||||||||||| |||||||| || | | | | ||| || ||
Sbjct 2699 AAGTTTTTCAGGATGGTTTCAGTGGAAATTGGGTACT--AA-A-A-T-TAAATG-ACCAA 2751
Query 702 -ATAGTTGGTTATTGGCCCAAAAAACTATTTACACACTTAAACAAAGGAGCTTCTTTGGT 760
|| ||||||| ||||| ||| | ||||||| |||||||| ||||||| |||||||||
Sbjct 2752 GTTA-TTGGTTACTGGCCTAAAGAGTTATTTACTCACTTAAATAAAGGAGTTTCTTTGGT 2810
Query 761 GCGATTTGGAGGAAATACTTTTACATCTCCGGATGGAATTAGTCCTCCAATGGGAAATGG 820
|| |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||
Sbjct 2811 ACGTTTTGGAGGAAATACATTTCCATCTCCGGAGGGAATTAGTCCTCCAATGGGAAATGG 2870
Query 821 ACATTTTCCGGTTATTAG-CTATTTTAAAAGTTCACATTATGTTCA--TGTTAAAGTTAA 877
|||||||| |||| | | |||| |||||||||||||| | |||| ||| ||||||||
Sbjct 2871 CCATTTTCCAGTTA-TCGACTATCATAAAAGTTCACATT-T-TTCATTTGTCAAAGTTAA 2927
Query 878 GAATTCAAATTATC-AA-CTAGTTGATATTGAAAG-CAGGAAAGCAAGGA-TATATGCAG 933
|||||| || |||| || | | | ||||||| ||| | |||| ||| || | |||||||
Sbjct 2928 GAATTCGAACTATCAAAGC-A-TCGATATTG-AAGATAAGAAAACAA-GACTTTATGCAG 2983
Query 934 ATTCTTACCAATGTTATAGACTATCATACTGGGGTTATTTCAAGTC-AACTGGAGTAAGT 992
||||||||||||||||||||||| | || ||||||||| |||||| || ||| |||
Sbjct 2984 ATTCTTACCAATGTTATAGACTAACGTATTGGGGTTATAGCAAGTCGAA-TGGGGTATCC 3042
Query 993 TTCTCTTTTGGGGGACCAGGTGGAAAATGTGGTA 1026
||||| ||||| |||||||||||||| |||||||
Sbjct 3043 TTCTCCTTTGGAGGACCAGGTGGAAATTGTGGTA 3076
> Ahg345603 jgi|Araly1|345603|fgenesh1_pg.C_scaffold_4001945
Length=561
Score = 433 bits (234), Expect = 1e-120
Identities = 469/577 (81%), Gaps = 37/577 (6%)
Strand=Plus/Plus
Query 466 ATGG-GGATACTTTAACGCGACTTACGATATATTGGACTGCAGATGGGTATAAGAA-AAC 523
|||| ||| ||||| ||||| |||| |||||||||||||||||||| ||||| || |||
Sbjct 1 ATGGCGGACACTTTCACGCGGTTTACAATATATTGGACTGCAGATGGCTATAA-AAGAAC 59
Query 524 TGGGTGTTATAATACAAATTGTCCTGGCTTTGTTATTATAAGTCGAGTT-CCGCAAATTG 582
||| || ||||||||||| ||||||||||| ||||| | ||||||| || | ||||
Sbjct 60 TGGATGCTATAATACAAAATGTCCTGGCTTCATTATTGTTTCTCGAGTTCCCTC-GATTG 118
Query 583 GAATC-GCTTTTAATGAATCCTCTATTTATGGTGGTAAAGGATCAGTTGTTATC-AGACC 640
| | | | ||| |||| || ||| ||||||||||||||| | ||||| ||| | | |||
Sbjct 119 G-AGCAACGTTTGATGATTCTTCTGTTTATGGTGGTAAAGAAACAGTTTTTA-CTAAACC 176
Query 641 ACAAGTTTTCCAGGATGGTTTCAGTGGAAACTGGGTACTAAAAGACACTGT-CATGAACG 699
|||||||| |||||||||||||||||||| |||||||| || | | | | ||| ||
Sbjct 177 GCAAGTTTTTCAGGATGGTTTCAGTGGAAATTGGGTACT--AA-A-A-T-TAAATG-ACC 229
Query 700 AA-ATAGTTGGTTATTGGCCCAAAAAACTATTTACACACTTAAACAAAGGAGCTTCTTTG 758
|| || ||||||| ||||| ||| | ||||||| |||||||| ||||||| |||||||
Sbjct 230 AAGTTA-TTGGTTACTGGCCTAAAGAGTTATTTACTCACTTAAATAAAGGAGTTTCTTTG 288
Query 759 GTGCGATTTGGAGGAAATACTTTTACATCTCCGGATGGAATTAGTCCTCCAATGGGAAAT 818
|| || |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||
Sbjct 289 GTACGTTTTGGAGGAAATACATTTCCATCTCCGGAGGGAATTAGTCCTCCAATGGGAAAT 348
Query 819 GGACATTTTCCGGTTATTAG-CTATT-TTAAAAGTTCACATTATGTTCA--TGTTAAAGT 874
|| |||||||| |||| | | || || |||||||||||||| | |||| ||| |||||
Sbjct 349 GGCCATTTTCCAGTTA-TCGACT-TTCATAAAAGTTCACATT-T-TTCATTTGTCAAAGT 404
Query 875 TAAGAATTCAAATTATC-AA-CTAGTTGATATTGAAAG-CAGGAAAGCAAGGA-TATATG 930
||||||||| || |||| || | | | ||||||| ||| | |||| ||| || | ||||
Sbjct 405 TAAGAATTCGAACTATCAAAGC-A-TCGATATTG-AAGATAAGAAAACAA-GACTTTATG 460
Query 931 CAGATTCTTACCAATGTTATAGACTATCATACTGGGGTTATTTCAAGTC-AACTGGAGTA 989
|||||||||||||||||||||||||| | || ||||||||| ||||| || ||| |||
Sbjct 461 CAGATTCTTACCAATGTTATAGACTAACGTATTGGGGTTATAGCAAGTTGAA-TGGGGTA 519
Query 990 AGTTTCTCTTTTGGGGGACCAGGTGGAAAATGTGGTA 1026
||||||||||| |||||||||||||| |||||||
Sbjct 520 TCCTTCTCTTTTGGAGGACCAGGTGGAAATTGTGGTA 556
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 38351654502
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5