BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G39750.1
Length=2370
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483001 jgi|Araly1|483001|fgenesh2_kg.4__2061__AT2G39750.1 3424 0.0
Ahg487406 jgi|Araly1|487406|fgenesh2_kg.6__540__AT5G06050.1 893 0.0
> Ahg483001 jgi|Araly1|483001|fgenesh2_kg.4__2061__AT2G39750.1
Length=2143
Score = 3424 bits (1854), Expect = 0.0
Identities = 2068/2167 (95%), Gaps = 31/2167 (1%)
Strand=Plus/Plus
Query 120 GCTAATGAAGCCTCTCACTAATGGCGATCTGT-TCAAATCCCCAACTCTGATCAAGATCT 178
|||||||||||||||| ||||||||||||| | |||||||||| ||||| ||||||||||
Sbjct 1 GCTAATGAAGCCTCTCCCTAATGGCGATCT-TCTCAAATCCCCCACTCTAATCAAGATCT 59
Query 179 CCGCCTTAGTTTTCGTCACCGTCGCTTTCTTCTACTTAGGCAAGCATTGGTCCGACGATG 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 CCGCCTTAGTTTTCGTCACCGTCGCTTTCTTCTACTTAGGCAAGCATTGGTCCGACGATG 119
Query 239 GCTACCAACAGCTCGTCTTCTTCTCCTCTTCCACTTCCGGTAGCTCGATCCCGGAGGTCT 298
|||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct 120 GCTACCAACAGCTCGTCTTCTTCTCCTCCTCCACCTCCGGCAGCTCGATCCCGGAGGTCT 179
Query 299 CCGTTTCACCGAATAGTAACAGAGTCTTT-AATTTATCAGCGATAATTCCTACTAACCAT 357
|||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct 180 CCGTCTCACCGAATAGTAACAGAGT-TTTCAATTTATCTGCGATAATTCCTACTAACCAT 238
Query 358 ACCCAGATTGAAATCCCCGCCACAATACGACAACAACCTCCGTCGGTGGTGGCGGACACG 417
||| |||||||||||||||||||||||| ||| ||||||||||| |||
Sbjct 239 ACCGAGATTGAAATCCCCGCCACAATACAACAGCAACCTCCGTC---GGT---------- 285
Query 418 GAGAAGGTTAAGGTGGAAGCTAAtcctcctcctcctcca-c--ctccttctccttcacct 474
|||||||||||||||||||||||||||||||||| | ||||| | ||| | ||
Sbjct 286 -----GGTTAAGGTGGAAGCTAATCCTCCTCCTCCTCCACCTTCTCCTCCACCTCCTTCT 340
Query 475 cctcctccGCCTGGTCCGGTTAAGAGCTTTGGGATAGTTGATGCGAACGGTGTGATGTCT 534
|||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 341 CCTCCTCCGCCTGGTCTGGTTAAGAGCTTTGGGATAGTAGATGCGAATGGTGTGATGTCT 400
Query 535 GACGATTTTGAGGTGGGTGAGGTTGAGAGTGATACAGTGGAAGATTGGGGGAATCAGACT 594
||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 401 GACGATTTTGAGGTGGGAGAGGTTGAGAGTGATACTGTGGAAGATTGGGGGAATCAGACA 460
Query 595 GAGATCGTTGAGGCGAAAAGCGACGGTGATTCTAAGGCTAGGGTTAGAATTAAGAAATTT 654
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 461 GAGATCGTTGAAGCGAAAAGGGACGGCGATTCTAAGGCTAGGGTTAGAATTAAGAAATTT 520
Query 655 GGGATGTGTCCTGAGAGTATGAGAGAGTATATACCTTGTTTGGATAATACTGATGTGATA 714
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 521 GGGATGTGTCGTGAGAGTATGAGAGAGTATATACCTTGTTTGGATAATACTGATGCGATA 580
Query 715 AAGAAGCTTAAATCGACAGAGCGAGGTGAGAGATTCGAGCGTCATTGTCCTGAGAAAGGT 774
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 581 AAGAAGCTCAAATCTACAGAACGAGGTGAGAGATTCGAGCGTCATTGTCCTGAGAAAGGT 640
Query 775 AAAGGCTTGAATTGCTTAGTTCCACCTCCTAAAGGTTACCGTCAGCCGATTCCATGGCCT 834
||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct 641 AAAGGCTTGAATTGCTTGGTTCCGCCTCCTAAAGGTTATCGTCAGCCGATTCCATGGCCT 700
Query 835 AAAAGCCGTGACGAGGTATGGTTTAGCAATGTTCCTCATACTCGGCTTGTTGAAGACAAA 894
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 701 AAAAGTCGTGACGAGGTATGGTTTAGCAATGTTCCTCATACTCGGCTTGTTGAAGACAAA 760
Query 895 GGAGGTCAGAACTGGATTTCACGAGACAAGAACAAGTTCAAGTTTCCTGGAGGTGGTACA 954
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 GGTGGTCAGAACTGGATTTCACGAGACAAGAACAAGTTCAAGTTTCCTGGAGGTGGTACA 820
Query 955 CAGTTTATTCATGGGGCTGATCAGTACTTGGACCAGATGTCTAAGATGGTTTCTGATATT 1014
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 821 CAGTTTATTCATGGGGCTGATCAGTACTTGGACCAGATGTCTAAGATGGTTTCTGATATC 880
Query 1015 ACGTTTGGCAAGCATATTAGGGTTGCTATGGATGTTGGTTGTGGTGTGGCGAGTTTTGGT 1074
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 881 ACGTTTGGCAAGCATATTAGGGTTGCTATGGATGTTGGTTGTGGTGTGGCGAGTTTTGGC 940
Query 1075 GCTTATCTATTGTCTCGTGATGTCATGACAATGTCTGTTGCACCAAAAGATGTCCATGAG 1134
||||||||||||| ||| |||||| ||||| ||||||||||||||||||||||||| |||
Sbjct 941 GCTTATCTATTGTTTCGCGATGTCTTGACAGTGTCTGTTGCACCAAAAGATGTCCACGAG 1000
Query 1135 AACCAAATTCAATTTGCTCTTGAGCGTGGTGTGCCTGCTATGGCGGCAGCATTTGCGACA 1194
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1001 AACCAAATTCAATTTGCTCTTGAGCGTGGTGTGCCTGCTATGGCGGCAGCATTTGCTACA 1060
Query 1195 AGGCGTTTGTTATATCCAAGCCAAGCTTTTGATCTTATTCATTGTTCAAGATGTAGAATC 1254
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1061 AGGCGTTTGTTATACCCAAGCCAAGCTTTTGATCTTATTCATTGTTCACGATGTAGAATC 1120
Query 1255 AACTGGACTCGTGATGATGGAATTTTGCTCCTTGAGATCAATAGAATGCTGCGCGCTGGA 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1121 AACTGGACTCGTGATGATGGAATTTTGCTCCTTGAGATCAATAGAATGCTGCGCGCTGGA 1180
Query 1315 GGATATTTTGCTTGGGCTGCACAGCCTGTTTATAAGCATGAACCCGCTTTGGAAGAACAA 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 GGATATTTTGCTTGGGCTGCACAGCCTGTTTATAAGCATGAACCCGCTTTGGAAGAACAA 1240
Query 1375 TGGACAGAAATGCTGAATCTTACTATTAGCCTCTGCTGGAAATTGGTAAAGAAGGAAGGA 1434
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 1241 TGGACAGAAATGCTGAATCTTACTACTAGCCTTTGCTGGAAATTGGTAAAGAAGGAAGGA 1300
Query 1435 TACGTTGCAATCTGGCAGAAGCCTTTCAACAACGACTGCTATTTGAGTCGTGAGGCTGGG 1494
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1301 TACGTTGCAATCTGGCAGAAGCCTTTCAACAACGACTGTTATTTGAGTCGTGAGGCTGGG 1360
Query 1495 ACTAAACCTCCTCTTTGTGATGAATCAGATGATCCCGATAATGTTTGGTACACAAATCTG 1554
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1361 GCTAAACCTCCTCTTTGTGATGAATCTGATGACCCCGATAATGTTTGGTACACAAATCTG 1420
Query 1555 AAACCTTGCATCAGTCGCATACCTGAGAAAGGGTACGGAGGAAACGTCCCCTTATGGCCT 1614
||||||||||||||||||||||||||||| || || |||||||| |||||||||||||||
Sbjct 1421 AAACCTTGCATCAGTCGCATACCTGAGAATGGATATGGAGGAAAGGTCCCCTTATGGCCT 1480
Query 1615 GCCCGTCTGCATACTCCACCTGATAGGCTGCAGACGATAAAATTTGATTCCTACATTGCT 1674
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCCCGCCTGCATACTCCACCTGATAGGCTGCAGACGATAAAATTTGATTCCTACATTGCT 1540
Query 1675 AGGAAAGAGCTATTCAAGGCAGAATCAAAATATTGGAATGAAATAATTGGGGGCTATGTT 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1541 AGGAAAGAGCTATTCAAGGCAGAATCAAAATATTGGAATGAAATAATTGGGGGATATGTT 1600
Query 1735 CGCGCCTTAAAATGGAAAAAGATGAAACTAAGAAATGTTTTGGACATGAGAGCAGGCTTT 1794
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1601 CGCGCCTTGAAATGGAAAAAGATGAAACTAAGAAATGTTTTGGACATGAGAGCAGGCTTT 1660
Query 1795 GGCGGATTTGCAGCTGCACTAAATGATCATAAACTCGATTGCTGGGTTCTAAGCGTGGTT 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1661 GGCGGATTTGCAGCTGCACTAAATGATCATAAACTCGATTGCTGGGTTCTAAGTGTGGTT 1720
Query 1855 CCTGTCAGTGGGCCTAACACATTGCCTGTCATTTATGACCGTGGACTGTTAGGAGTGATG 1914
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1721 CCTGTCAGTGGGCCTAACACATTGCCTGTCATTTATGACCGTGGACTGTTAGGAGTTATG 1780
Query 1915 CACGATTGGTGTGAACCATTTGATACATACCCACGGACATATGACTTCTTACATGCCTCT 1974
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1781 CATGATTGGTGTGAACCATTTGATACATACCCACGGACATATGACTTCTTACATGCCTCT 1840
Query 1975 GGACTCTTCTCGATCGAGAGAAAAAGATGTGAGATGTCAACCATATTGTTAGAGATGGAC 2034
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1841 GGACTCTTCTCAATCGAGAGGAAAAGATGTGAGATGTCAACCATATTGTTAGAGATGGAC 1900
Query 2035 CGGATATTAAGACCCGGTGGAAGAGCATACATTAGGGATTCAATTGATGTTATGGATGAA 2094
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1901 AGGATATTGAGACCCGGTGGAAGAGCATACATTAGGGATTCAATTGATGTTATGGATGAA 1960
Query 2095 ATTCAAGAAATCACAAAGGCCATGGGTTGGCATACTTCTCTGCGTGACACATCCGAGGGT 2154
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1961 ATTCAAGAAATCACAAAGGCTATGGGTTGGCATACTTCTCTGCGTGACACATCCGAGGGT 2020
Query 2155 CCTCACGCAAGTTACAGGATTCTAACATGCGAGAAGCGTCTCCTTCGAGCTTAATACCAC 2214
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2021 CCTCACGCAAGTTACAGGATTCTAACATGTGAGAAGCGTCTCCTTCGAGCTTAATACCAG 2080
Query 2215 ACAAGTTACTGCACT--AGTCAACACAATATATTTTGTTTGGTAGTATATCTCTTATTGT 2272
||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2081 ACAAGTTACTGCACTTTAGTCAACACAATATATT--GTTTGGTA--ATATCTCTTATTGT 2136
Query 2273 TTTCTTC 2279
|||||||
Sbjct 2137 TTTCTTC 2143
> Ahg487406 jgi|Araly1|487406|fgenesh2_kg.6__540__AT5G06050.1
Length=2494
Score = 893 bits (483), Expect = 0.0
Identities = 1246/1606 (78%), Gaps = 86/1606 (5%)
Strand=Plus/Plus
Query 630 GGCTAGGGTTAGAATTAAGAAATTTGGGATGTGTCCTGAGAGTATGA-GAGAGTATATAC 688
|||||| ||||| | | |||||| | ||||||| | |||| ||||| | ||||| || |
Sbjct 467 GGCTAGAGTTAGTGTGAGGAAATTCGAGATGTGTTCGGAGAATATGACG-GAGTACATTC 525
Query 689 CTTGTTTGGATAATACT-GATGTGAT-AAAGAAGCTTAAATCGACAGAGCGAGGTGAGAG 746
|||||||||||||| | || | || ||| | |||||| ||||| | ||| || ||| |
Sbjct 526 CTTGTTTGGATAAT-GTAGAAGCCATCAAA-AGGCTTAATTCGACGGCGCGTGGAGAGCG 583
Query 747 ATTCGAGCGTCATTGTCCTGAGA-AAGGTAA-AGGCTTGAATTGCTTAGTTCCACCTCCT 804
||| ||||| |||||||| | | |||| || || ||||||||| ||||| |||
Sbjct 584 ATTTGAGCGGAATTGTCCT-AAAGAAGG-AATGGGGTTGAATTGCACCGTTCCTGTTCCC 641
Query 805 AAAGGTTACCGTCAGCCGATTCCATGGCCTAAAAGCCGTGACGAGGTATGGTTTAGCAAT 864
|| || ||||||| |||||||| ||||| |||||||||| ||||| ||||| | ||||
Sbjct 642 AATGGGTACCGTCCTCCGATTCCGTGGCCGGAAAGCCGTGATGAGGTGTGGTTCAACAAT 701
Query 865 GTTCCTCATACTCGGCTTGTTGAAGACAAAGGAGGTCAGAACTGGATTTCAC-GAGACAA 923
||||| |||||| ||||||||||| ||||| ||||| |||||||||| || ||| ||
Sbjct 702 GTTCCACATACTAAACTTGTTGAAGATAAAGGTGGTCAAAACTGGATTT-ACAAAGAGAA 760
Query 924 -GAACAAGTTCAAGTTTCCTGGAGGTGGTACACAGTTTATTCATGGGGCTGATCAGTACT 982
| |||| |||||||||||||| |||||||| |||||||| || ||||||||||||||||
Sbjct 761 TG-ACAAATTCAAGTTTCCTGGTGGTGGTACTCAGTTTATACACGGGGCTGATCAGTACT 819
Query 983 TGGACCAGATGTCTAAGATGGTTTCTGATATTACG-TTTGGCAAGCATATTA-GGGTTGC 1040
|||| ||||| ||| ||||| || ||||||| | | ||||| || |||| | | ||||
Sbjct 820 TGGATCAGATCTCTCAGATGATTCCTGATATCA-GCTTTGGTAATCATA-CACGAGTTGT 877
Query 1041 TATGGATGTTGGTTGTGGTGTGGCGAGTTTTGGTGCTTATC-TATTGTCTCGTGATGTCA 1099
| | || |||| || |||||||| ||||||||||| || | || |||| || |||||
Sbjct 878 TCTTGACATTGGATGCGGTGTGGCAAGTTTTGGTGCCTA-CTTAATGTCACGAAATGTCT 936
Query 1100 TGACAATGTCTGTTGCACCAAAAGATGTCCATGAGAACCAAATTCAATTTGCTCTTGAGC 1159
|||| |||||| | || ||||||||||| || |||||||| || ||||||||||| ||||
Sbjct 937 TGACTATGTCTATAGCTCCAAAAGATGTTCACGAGAACCAGATACAATTTGCTCTCGAGC 996
Query 1160 GTGGTGTGCCTGCTATGGCGGCAGCATTTGCGACAAGGCGTTTGTTATATCCAAGCCAAG 1219
||||||| ||||| |||| ||||||||| | ||| || | |||| || ||||||||||
Sbjct 997 GTGGTGTTCCTGCAATGGTGGCAGCATTCACAACACGGAGACTGTTGTACCCAAGCCAAG 1056
Query 1220 CTTTTGATCTT-ATTCATTGTTCAAGATGTAGAATCAACTGGACTCGTGATGATGGAATT 1278
|||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1057 CTTTTGAT-TTGGTTCATTGTTCAAGATGTAGAATCAACTGGACTCGTGATGATGGGATC 1115
Query 1279 TTGCTCCTTGA-GATCAATAGAATGCTGCGCGCTGGAGGATATTTTGCTTGGGCTGCACA 1337
|||||||||| | | ||||| ||||| || || ||||||||||||| |||||| |||||
Sbjct 1116 CTGCTCCTTGAAGTT-AATAGGATGCTTCGTGCCGGAGGATATTTTGTTTGGGCAGCACA 1174
Query 1338 GCCTGTTTATAAGCATGAACCCGCTTTGGAAGAACAATGG-ACAGAAATGCTGAATCTTA 1396
||||| |||||||||||| || ||||||||||| ||| | ||| ||||| || ||||
Sbjct 1175 ACCTGTATATAAGCATGAAAAGGCCTTGGAAGAACAGTGGGA-AGAGATGCTAAACCTTA 1233
Query 1397 CTATTAGCCTCTGCTGGAAA-TTGGTAAAGAAGGAAGGATACGTTGCAATCTGGCAGAAG 1455
| | ||| || |||||| ||| |||||||||||||||| | || ||||||||||||
Sbjct 1234 CCACTAGGCTATGCTGGGTTCTTG-TAAAGAAGGAAGGATATATAGCTATCTGGCAGAAG 1292
Query 1456 CCTTTCAACAACGACT-GCTAT-TTGAGTCGTGAG-GCTGGGACTAAACCTCCTC-TTTG 1511
||| | || ||| ||| | ||| || ||||||| | ||||| | | | | ||||| ||||
Sbjct 1293 CCTGTAAATAAC-ACTTGTTATCTT-AGTCGTG-GTGCTGG-AGTCA-C-TCCTCCTTTG 1346
Query 1512 TGATGAAT-C--A-GATGATCCC-GATAATGTTTGGTACACAAATCTGAAACCTTGCATC 1566
|| ||| | | ||||| ||| |||||||||||||||| ||||||| | |||||
Sbjct 1347 TGC--AATTCTGAAGATGA-CCCAGATAATGTTTGGTACATGGATCTGAAGGCATGCATT 1403
Query 1567 AGTCGCATACCTGA-GAAAG-GG-TACGGAG-GAAACGTCC-CCTTATGGCCTGCCCGTC 1621
| | | || ||| |||| || || |||| ||| | | | |||| |||| || |||
Sbjct 1404 ACTAGAAT---TGAAGAAAATGGATATGGAGCGAATCTTGCTCCTT--GGCCAGCTCGTT 1458
Query 1622 TGCATACTCCACCTGATAGGCTGCAGACGATA-AAATTTGATTCCTACATTGCTAGGAAA 1680
| || || ||||| |||||||||||||| ||| ||||| ||||| ||||| || | |||
Sbjct 1459 TACAGACCCCACCGGATAGGCTGCAGACAATACAAATT-GATTCTTACATAGCCCGAAAA 1517
Query 1681 GAGCTATTCA-AGGCAGAATCAAAATATTGGAATGAAATAAT-TGGGGGCTATGTTCGCG 1738
||||| || || | |||||||| || ||||| |||||||| | |||||| |
Sbjct 1518 GAGCTCTTTGTAG-CTGAATCAAAGTACTGGAAAGAAATAATATCAAA-CTATGTAAATG 1575
Query 1739 CCTTAAAATGGAAAAAGAT-GAAACTAAGAAATGTTTTGGACATGAGAGCAGGCTTTGGC 1797
|| || | ||||| |||| | | || |||||||| |||||||||| ||| || ||||||
Sbjct 1576 CCCTACACTGGAAGCAGATAGGA-CTCAGAAATGTCTTGGACATGAAAGCTGGATTTGGC 1634
Query 1798 GGATTTGCAGCTGCACTAAATGATCATAAAC-TCGATTGCTGGGTTCT-AAGCGTGGTTC 1855
||||||||||||||| || ||| | |||| | |||||||||||||| || ||| | |
Sbjct 1635 GGATTTGCAGCTGCATTAGCTGAGC-TAAAGGTTGATTGCTGGGTTCTCAA-CGTTATCC 1692
Query 1856 CTGTCAGTGGGCCTAACACATTGCCTGTCATTTATGACCGTGGACTGTTAGGAGTGATGC 1915
| |||||||| || |||||||| || || || |||||||||||||| ||||||| ||||
Sbjct 1693 CAGTCAGTGGTCCCAACACATTACCCGTTATATATGACCGTGGACTACTAGGAGTAATGC 1752
Query 1916 ACGATTGGTGTGAACCATTTGATACATACCC-ACGGA-CATATGACTT-CTTACATGCCT 1972
| ||||||||||| ||||| ||||| ||||| | | | | || || || || ||||||
Sbjct 1753 ATGATTGGTGTGAGCCATTCGATACTTACCCGA-GAAGC-TACGATTTGCTG-CATGCCG 1809
Query 1973 CTGGACTCTTCTCGATCGAGAGAAAAAGATGTGAGATGTCAACCAT-ATTGTTAGAGATG 2031
| || || || || || || |||||||| || | ||| |||| || || | ||||||||
Sbjct 1810 CGGGTCTATTTTCCATTGAAAGAAAAAGGTGCAACATGACAACGATGAT-GCTAGAGATG 1868
Query 2032 GACCGGATATTAAGACCCGGTGGAAGAGCATACATTA-GGGATTCAATTGATGTTATG-G 2089
|||||||| || ||||| || ||| | | |||||| | ||||| | || |||| ||| |
Sbjct 1869 GACCGGATTTTGAGACCTGGAGGACGTGTATACAT-ACGGGATACTATCAATGTAATGAG 1927
Query 2090 ATGAAATTCAAGAAATCACAAAGGCCATG-GGTTGGCATACTT-CTCTGCGTGACACATC 2147
||| ||||||| || ||| || ||| ||| |||| || || | ||||| || |
Sbjct 1928 -TGAGCTTCAAGAGATTGGAAACGCAATGAGGT-GGCACACGAGCT-TACGTGAAAC-TG 1983
Query 2148 C-GAGGGTCCTCACGCAAGTTACAGGATTCTAACATGCGAGAAGCG 2192
| || || |||||||||||||||||| |||| ||| ||||||||
Sbjct 1984 CTGAAGGACCTCACGCAAGTTACAGGGTTCTCGTATGTGAGAAGCG 2029
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89283534280
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5