BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G40360.1 Length=2560 Score E Sequences producing significant alignments: (Bits) Value Ahg483090 jgi|Araly1|483090|fgenesh2_kg.4__2150__AT2G40360.1 3541 0.0 Ahg906059 jgi|Araly1|906059|Al_scaffold_0003_3187 1317 0.0 Ahg349526 jgi|Araly1|349526|fgenesh1_pg.C_scaffold_6000119 935 0.0 > Ahg483090 jgi|Araly1|483090|fgenesh2_kg.4__2150__AT2G40360.1 Length=2313 Score = 3541 bits (1917), Expect = 0.0 Identities = 2185/2315 (94%), Gaps = 16/2315 (1%) Strand=Plus/Plus Query 19 TTTCTTCTCAGGCCAAAACTCGCCTCTGGAAGCTCCGATGACGAAGAGGAGCAAAGGAGC 78 ||||||||||| |||||||||||||||| |||||||||||||||||| || |||||||| Sbjct 1 TTTCTTCTCAGACCAAAACTCGCCTCTGAAAGCTCCGATGACGAAGAAGAAAAAAGGAGC 60 Query 79 TAACGAAGATAAGCTGATAGAAACCAAAAGCAAAAACGTTTCTGGAAAATCTCAGAAACA 138 ||||||||||||| | || |||||||| ||||||| ||||||||| |||||||||||||| Sbjct 61 TAACGAAGATAAGATTATTGAAACCAAGAGCAAAACCGTTTCTGGGAAATCTCAGAAACA 120 Query 139 GAAGAAACCAGTAG--A-AGCAGAAAGCTTAAAAGAGGAAGACCTTCTACAAGCATCCGG 195 |||||||||||||| | || ||||||||| |||||||| ||||||||||||| ||| || Sbjct 121 GAAGAAACCAGTAGAAATAGAAGAAAGCTTGAAAGAGGAGGACCTTCTACAAGAATCTGG 180 Query 196 AACTGATTCTGATTACGACGGAGATAGTTTGCCTGGTTCTTTGAATTCCGACGATTTCGA 255 ||||||||||||||||||||| |||||||||||||| |||||| ||||||| |||||||| Sbjct 181 AACTGATTCTGATTACGACGGCGATAGTTTGCCTGGGTCTTTGGATTCCGATGATTTCGA 240 Query 256 CTCCGATTTTTCCGATTCAGAGGATGATGGAACACATGAAGGAACAGAAGATGGAGATGT 315 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 241 CTCCGATTTTTTCGATTCAGAGGATGATGGAACACAGGAAGGAACAGAAGATGGAGATGT 300 Query 316 AGAATTTTCCGATGACGACG-AC---G-----TGCTTGAGCATGATGGGTCAATTGATAA 366 |||||||||||| ||||||| | | ||||||||||||| |||||||||||||| Sbjct 301 AGAATTTTCCGAGGACGACGTGCTTGGTAATTTGCTTGAGCATGAGGGGTCAATTGATAA 360 Query 367 CGAGGATGATGATGGAAGTGAACATGTAGGTAGTGACAATAATGAGGAACATGGGAGTGA 426 || |||||||| | ||||||||| |||| |||||||| ||||||| |||||||||| Sbjct 361 TGAAGATGATGAAGAAAGTGAACAAGTAGAAAGTGACAACGGTGAGGAAGATGGGAGTGA 420 Query 427 TGAAGATTCTGAGCGAGGTGAAGCGGTTGAAGAGAGCGATTCCTCAGAAGATGAGGTTCC 486 ||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 421 TGAAGGTTCTGAGCGAGATGAAGCGGTTGAAGAGAGCGATTCATCAGAAGATGAGGTTCC 480 Query 487 ATCTAGAAATACAGTTGGGAATGTTCCCTTAAAGTGGTATGAAGATGAGAAACATATTGG 546 |||||||||||||||||| ||||||| || |||||||| ||||||||||||||||||| Sbjct 481 TTCTAGAAATACAGTTGGGGATGTTCCATTGGAGTGGTATAAAGATGAGAAACATATTGG 540 Query 547 TTATGACCTCACTGGG-AAGAAGATTACTAAGAAAGAAAAACAAGATAAACTCGACTCTT 605 ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 TTATGACATCAC-GGGAAAGAAGATTACTAAGAAAGAAAAACAAGATAAACTCGACTCTT 599 Query 606 TTCTTGCAACTATAGATGACTCTAAGACTTGGCGCAAAATTTATGATGAATATAATGACG 665 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 600 TTCTTGCAACTATGGATGACTCTAAGAATTGGCGCAAAATTTATGATGAATATAATGACG 659 Query 666 AGGACGTTGAGCTGACTAAAGAGGAGAGCAAGATCGTTCAG-AGAATACTCAAAGGGGAA 724 |||| || |||||||||||||||||| |||| || | | | |||||||||||||||||| Sbjct 660 AGGAAGTAGAGCTGACTAAAGAGGAGTGCAACCTCATGC-GTAGAATACTCAAAGGGGAA 718 Query 725 GCTCCACATGCGGACTTTGATCCATATGCACCTTATGTTGAGTGGTTCAAACATGATGAT 784 ||||||||||| ||||||||||||||||| ||||||||||| ||||||||| |||||| Sbjct 719 GCTCCACATGCTGACTTTGATCCATATGCGCCTTATGTTGATTGGTTCAAATGGGATGAT 778 Query 785 GCAATACATCCACTCTCAAGTGCACCAGAGCCCAAGCGAAGATTCATCCCTTCAAAATGG 844 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 779 TCAATACATCCACTCTCAAGTGCGCCAGAGCCCAAGCGAAGATTCATCCCTTCAAAATGG 838 Query 845 GAGGCCAAAAAGGTTGTTAAGATTGTTAGAGCAATACGTAAGGGGTGGATCAAGTTTGAT 904 ||||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||| Sbjct 839 GAGGCCAAAAAGGTTCTTAAGCTTGTTAGAGCAATCCGGAAGGGGTGGATCAAGTTTGAT 898 Query 905 AAGCCTGAAGAAGAGCCCAATGTATACCTTTTATGGGGTGATGATTCGACATCTGATCAA 964 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct 899 AAGCCTGAAGAAGAGCCCAATGTATACCTCTTATGGGGTGACGATTCGACGTCTGATCAA 958 Query 965 AAGAGCAAGCATTTAACTTATATTCCTCCACCCAAGCTTAAATTGCCAGGACACGATGAA 1024 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 959 AAGAGCAAGCATTTAACATATATTCCTCCACCCAAGCTGAAATTGCCAGGACACGATGAA 1018 Query 1025 TCATACAATCCTTCTTTGGAATATATTCCAACAGAGGAGGAGAAAGCCTCATATGAGTTG 1084 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1019 TCATACAATCCTTCTTTGGAATATATTCCAACAGAGGAGGAGAAAGCCTCATATGAATTG 1078 Query 1085 ATGTTTGAGGAAGATCGTCCAAAATTCATTCCTACAAGGTTTACATCTTTGAGAAGCATC 1144 |||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 1079 ATGTATGAGGAAGATCGTCCAAAATTCATTCCTAAAAGGTTTACATCTCTGAGAAGCATC 1138 Query 1145 CCTGCGTATGAGAATGCACTGAAGGAGTCTTTTGAGCGTTGTTTGGATCTATACCTATGT 1204 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1139 CCAGCGTATGAGAATGCACTGAAGGAGTCTTTTGAGCGTTGTTTGGATCTATACCTATGT 1198 Query 1205 CCAAGAGTTCGAAAGAAGAGAATAAACATCGACCCTGAATCTTTGAAGCCTAAGCTACCT 1264 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1199 CCGAGAGTTCGAAAGAAGAGGATAAACATCGACCCTGAATCTTTGAAGCCTAAGCTACCT 1258 Query 1265 AGTAGGAAGGATCTTAGACCTTATCCTAACTCCTGTTATCTTGAATATAAAGGCCATACA 1324 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 1259 AGTAGGAAGGATCTTAGACCTTATCCTAATTCCTGTTATCTTGAATATAAAGGACATACA 1318 Query 1325 GGGGCTGTTACTTCAATATCCACTGATAGTTCTGGCGAGTGGATAGCCTCAGGTTCAACT 1384 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1319 GGGGCTGTTACTACCATATCCACTGATAGTTCTGGCGAGTGGATAGCCTCAGGTTCAACT 1378 Query 1385 GATGGATCTGTCCGTATGTGGGAAGTGGAGACTGGTAGATGCCTTAAGGTCTGGCAGTTT 1444 ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1379 GATGGATCTGTTCGTATGTGGGAAGTGGAAACTGGTAGATGTCTTAAGGTCTGGCAGTTT 1438 Query 1445 GACGAAGCTATCATGTGTGTGGCTTGGAATCCTCTTTCCAGGCTTCCAGTTTTAGCCGTT 1504 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 GATGAAGCTATTATGTGTGTGGCTTGGAATCCTCTTTCCAGGCTTCCAGTTTTAGCCGTT 1498 Query 1505 GCCATGGGACGAGATTTGTTTTTTCTGAACACTGAACTTGGGACTGATGAGGAACAGGAA 1564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1499 GCCATGGGACGAGATTTGTTTTTTCTGAACACTGAACTTGGGACTGATGAGGAACAGGAA 1558 Query 1565 ATTACTAAAGAGAGGCTTCACTCAGGAAACATCCCAGAACCAGACGCATCTGTTGCAGCA 1624 |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| Sbjct 1559 ATTACTAAAGAGAGGCTTCACTCAGGAAACATTCCAGAACCAGAAGTGTCTGTTGCAGCA 1618 Query 1625 ATTGTAACCTGGCTACCTGATGAGTTATATGGAGGGATTAAGATAAGACATTTTAAGAGC 1684 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1619 ATTGTAACCTGGCTACCTGATGAGTTATATGGAGGGATCAAGATAAGACATTTTAAGAGC 1678 Query 1685 ATATCGTCTATTGACTGGCATCGTAAAGGAGACTATCTCTCAACAGTGATGGCATCCGGG 1744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1679 ATATCGTCTATTGACTGGCATCGTAAAGGAGACTATCTCTCAACAGTGATGGCATCTGGC 1738 Query 1745 GAAACACGGGGAGTGGTATTGCACCAACTGTCAAAACAGAAAACACAAAGGCTCCCATTT 1804 ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 1739 GAAACGCGGGGAGTGGTACTGCACCAACTCTCAAAACAGAAAACACAAAGGCTCCCATTT 1798 Query 1805 AAGATTCGTGGACTTCCAGTCTGTACACTTTTTCATCCCAGCCTTTCTTACTTCTTCGTT 1864 ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1799 AAGATCCGCGGACTTCCAGTCTGCACACTTTTTCATCCCAGCCTTTCTTACTTCTTCGTT 1858 Query 1865 GCGACAAGAAAGGACGTGCGTGTTTACAATCTTTTGAAGCCAGGCGAGGCCACCAAAAAG 1924 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1859 GCGACAAGAAAGGACGTGCGTGTTTACAATCTTTTGAAGCCAGGCGAGGCCACCAAAAAG 1918 Query 1925 CTTGAGACAGGATTGAGAGAAATCTCATCAATGGCGATTCATCCTGGTGGTGATAATCTG 1984 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1919 CTTGAGACGGGATTGAGAGAAATCTCATCCATGGCGATTCATCCTGGTGGTGATAATCTG 1978 Query 1985 ATAGTAGGAAGCAAAGAAGGGAAGATGTGTTGGTTTGACATGGATCTATCTTCGAAACCA 2044 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1979 ATAGTAGGAAGCAAAGAAGGGAAGATGTGTTGGTTTGACATGGATCTGTCTTCAAAACCG 2038 Query 2045 TACAAGACTCTCAAGAATCATCCTAAAGACATTACAAATGTGGCAGTTCATCGATCATAT 2104 |||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 2039 TACAAGACGCTTAAGAATCACCCTAAAGACATTACAAATGTGGCAGTTCATCGGTCATAT 2098 Query 2105 CCGTTATTTGCTTCGTGCTCGGAGGATTCAACAGCTTATGTTTTCCATGGAATGGTGTAT 2164 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2099 CCGTTATTTGCTTCGTGCTCGGAAGATTCAACAGCTTATGTTTTCCATGGAATGGTGTAT 2158 Query 2165 AATGATCTGAACCAGAATCCTCTGATTGTGCCATTGGAGATTCTAAGAGGTCATTCTTCA 2224 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2159 AATGATCTGAATCAGAATCCTCTGATTGTCCCATTGGAGATTCTAAGAGGTCATTCTTCA 2218 Query 2225 AAAGGAGGAGTCTTGGACTGCAAGTTTCATCCGAGACAACCATGGCTATTCACTGCAGGC 2284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2219 AAAGGAGGAGTCTTGGACTGCAAGTTTCATCCGAGACAACCATGGCTATTCACTGCAGGC 2278 Query 2285 GCTGACTCTATTATCAAACTCTATTGCCACTAGAT 2319 |||||||| |||||||||||||||||||||||||| Sbjct 2279 GCTGACTCGATTATCAAACTCTATTGCCACTAGAT 2313 > Ahg906059 jgi|Araly1|906059|Al_scaffold_0003_3187 Length=2520 Score = 1317 bits (713), Expect = 0.0 Identities = 1101/1284 (86%), Gaps = 43/1284 (3%) Strand=Plus/Plus Query 1056 CAGAGGAGGAGAAAGCCTCATATGAGTTGATGTTTGAGGAAGATCGTCCAAAATTCATTC 1115 ||||||| ||| ||||||||| ||| ||| ||| |||||||||||||||||||||||||| Sbjct 1256 CAGAGGAAGAGCAAGCCTCATGTGACTTGTTGTGTGAGGAAGATCGTCCAAAATTCATTC 1315 Query 1116 CTACAAGGTTTACATCTTTGAGAAGCATCCCTGCGTATGAGAATGCACTGAAGGAGTCTT 1175 ||| || |||||||||| |||||||||| || || |||| ||||||||| || ||||||| Sbjct 1316 CTAAAAAGTTTACATCTCTGAGAAGCATTCCAGCATATGCGAATGCACTAAAAGAGTCTT 1375 Query 1176 TTGAGCGTTGTTTGGATCTATACCTATGTCCAAGAGTTCGAAAGAAGAGAATAAACATCG 1235 |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| | Sbjct 1376 TTGACCGTTGTTTGGATCTATACCTATGTCCGAGAGTCCGAAAGAAGAGAATAAACATTG 1435 Query 1236 ACCCTGAATCTTTGAAGCCTAAGCTACCTAGTAGGAAGGATCTTAGACCTTATCCTA-AC 1294 | ||||||||||| |||||||||||||||||||| || ||||||||| ||||||| | || Sbjct 1436 ATCCTGAATCTTTAAAGCCTAAGCTACCTAGTAGAAAAGATCTTAGAGCTTATCC-AGAC 1494 Query 1295 TCCTGTTATCTTGAATATAAAGGCCATACAGGGGCTGTTACTTCAATATCCACTGATAGT 1354 || ||||||||||||||||||||||||||||| |||||| | |||||||||||| || Sbjct 1495 TCATGTTATCTTGAATATAAAGGCCATACAGGAAAAGTTACTACCATATCCACTGATTGT 1554 Query 1355 TCTGGCGAGTGGATAGCCTCAGGTTCAACTGATGGATCTGTCCGTATGTGGGAAGTGGAG 1414 | |||| | |||||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct 1555 TATGGCCAATGGATAGCCTCAGGTTCAACAGATGGATCCGTCCGTATATGGGAAGTGGAA 1614 Query 1415 ACTGGTAGATGCCTTAAGGTCTGGCAGTTTGACGAAGCTA-TCATGTGTGTGGCTTGGAA 1473 ||||||||||| |||||| ||||||| ||||| ||||| | ||| |||||||||||||| Sbjct 1615 ACTGGTAGATGTCTTAAGATCTGGCAATTTGATGAAGCCATTCA-CTGTGTGGCTTGGAA 1673 Query 1474 TCCTCTTTCCAGGC-TTCCAG-TTTTAGCCGTTGCCATGGGACGAGATTTGTTTTTTC-T 1530 |||||||| | ||| |||| | |||||||| |||||||||||||||||||| || || | Sbjct 1674 TCCTCTTTTC-GGCTTTCC-GATTTTAGCCATTGCCATGGGACGAGATTTG-GTTATCAT 1730 Query 1531 GAACACTGAACTTGGGACTGATGAGGAACAGGAAATTACTAAAGAGAGGCTTCACTCAGG 1590 |||||||||||||| ||||||| ||||||| ||| || | ||||| |||||||| ||| Sbjct 1731 TAACACTGAACTTGGTACTGATGTGGAACAGAAAAATATTGAAGAGCTGCTTCACTTAGG 1790 Query 1591 AAACATCCCAGAACCAGACGCATCTGTTGCAGCAATTGTAACCTGGCTACCTGATGAGTT 1650 |||| | ||||||||| | ||||||||||||||||||| || ||||| || |||||| Sbjct 1791 AAACGTTCCAGAACCAAATGCATCTGTTGCAGCAATTGCAAGATGGCTTCCAGATGAGAA 1850 Query 1651 ATATGGAGGGATTAAGATAAGACATTTTAAGAGCATATCGTCTATTGACTGGCATCGTAA 1710 ||||||||| || | ||| ||||||||||||| |||||| |||||||||||||||||| Sbjct 1851 ATATGGAGGAATCATGATTAGACATTTTAAGAACATATCCAGTATTGACTGGCATCGTAA 1910 Query 1711 AGGAGACTATCTCTCAACAGTGATGGCATCCGGGGAAACACGGGGAGTGGT-ATTGCACC 1769 ||||||||| | || ||||| ||||||||||| |||||||| || || || ||| || | Sbjct 1911 GGGAGACTATATGTCGACAGTCATGGCATCCGGCGAAACACGAGGTGTTGTAATT-CATC 1969 Query 1770 AACTGTC-AAAACAGAAAACACAAAGGCTCCCATTTAAGATTC-GTGGACTTCCAGT--C 1825 || | || |||| || ||||||| | ||||| |||| || ||||||||||||| | Sbjct 1970 AAATCTCGAAAA-AGCTTACACAAAAG---CCATTCAAGA-TCTGTGGACTTCCAGTGAC 2024 Query 1826 TGTACACTTTTTCATCCCAGCCTTTCTTACTTCTTCGTTGCGACAAGAAAGGACGTGCGT 1885 || | ||||||||||| |||||||| ||||||||| | |||||||||||| |||||| | Sbjct 2025 TG--CTCTTTTTCATCCTAGCCTTTCATACTTCTTCATCGCGACAAGAAAGAACGTGCAT 2082 Query 1886 GTTTACAATCTTTTGAAGCCAGGCGAGGCCACCAAAAAGCTTGAGAC-AGGATTGAGAGA 1944 ||||||||||| || ||| || ||| || |||||||| || || | || |||| || Sbjct 2083 GTTTACAATCTGTTAAAGGTAGATGAGCCCGTAAAAAAGCTGGAAACTA-GAATGAGGGA 2141 Query 1945 AATCTCATCAATGGCGATTCATCCTGGTGGTGATAATCTGATAGTAGGAAGCAAAGAAGG 2004 |||||||||||||||||||||||||||||||||||||||||||||||||| || || || Sbjct 2142 AATCTCATCAATGGCGATTCATCCTGGTGGTGATAATCTGATAGTAGGAAACA--GA-GG 2198 Query 2005 GAAGATGTGTTGGTTTGACATGGATCTATCTTCGAAACCATACAAGACTCTCAAGAATCA 2064 ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||| Sbjct 2199 GAAGATGTGTTGGTTTGACATGGATCTTTCTTCGAAGCCGTACAAGACTCTCAAGAATCA 2258 Query 2065 TCCTAAAGACATTACAAATGTGGCAGTT-CATCGAT-CATATCCGTTATTTGCTTCGTGC 2122 |||||| |||||||| |||| ||| ||| || || | | |||||||| |||||||||| | Sbjct 2259 TCCTAAGGACATTACTAATGCGGC-GTTTCACCG-TGCGTATCCGTTGTTTGCTTCGTCC 2316 Query 2123 TCGGAGGATTCAACAGCTTATGTTTTCCATGGAATGGTGTATAATGATCTGAACCAGAAT 2182 |||||||| |||||||||| ||| |||||||||| |||||||||||||||||| ||||| Sbjct 2317 TCGGAGGACTCAACAGCTTTTGTGTTCCATGGAAAGGTGTATAATGATCTGAAGGAGAAT 2376 Query 2183 CCTCTGATTGTGCCATTGGAGATTCTAAGAGG---T-C-A-TTCTTCAAAAGGAGGAG-T 2235 |||||||||||||| || |||||||||||||| | | | ||||||||| || |||| | Sbjct 2377 CCTCTGATTGTGCCGTTAGAGATTCTAAGAGGCCATTCTACTTCTTCAAATGGGGGAGGT 2436 Query 2236 --CTTGGACTGCAAGTTTCATCCGAGACAACCATGGCTATTCACTGCAGGCGCTGACTCT 2293 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 2437 GTCTTGGACTGCAAGTTTCATCCAAGACAACCATGGCTATTCACTGCAGGGGCTGACTC- 2495 Query 2294 A-TTATCAAACTCTATTGCCACTA 2316 | |||| ||||||||||||||||| Sbjct 2496 AGTTATAAAACTCTATTGCCACTA 2519 > Ahg349526 jgi|Araly1|349526|fgenesh1_pg.C_scaffold_6000119 Length=1164 Score = 935 bits (506), Expect = 0.0 Identities = 815/960 (85%), Gaps = 38/960 (4%) Strand=Plus/Plus Query 1376 GGTTCAACTGATGGATCTGTCCGTATGTGGGAAGTGGAGACTGGTAGATGCCTTAAGGTC 1435 ||||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||| || Sbjct 223 GGTTCAACTGATGGATCCGTCCGTATATGGGAAGTGGAAACTGGTAGATGTCTTAAGATC 282 Query 1436 TGGCAGTTTGACGAAGCTATCATGTGTGTGGCTTGGAATCCTCTTTCCAGGCTT-CCAGT 1494 ||||||||||| |||||||| | ||||||||| ||||||||||| ||| ||||| || | Sbjct 283 TGGCAGTTTGATGAAGCTATTAAGTGTGTGGCGTGGAATCCTCTCTCC-GGCTTATCAAT 341 Query 1495 TTTAGCCGTTGCCATGGGACGAGATTTGTTTTTTCTGAACACTGAACTTG-GGACTGATG 1553 | |||| ||||||||||||||||||||| || | |||||||||||||||| | |||||| Sbjct 342 TGTAGCTGTTGCCATGGGACGAGATTTGGTTATCCTGAACACTGAACTTGACG-CTGATG 400 Query 1554 AGGAACAGGAAAT-TACTAAAGAGAGGCTTCACTCAGGAAACATCCCAGAACCAGACGCA 1612 ||||||||| ||| || ||||||| ||| |||| ||||||| | ||||||| | ||| Sbjct 401 AGGAACAGG-AATATATTAAAGAGCTGCTGCACTTAGGAAACGTTATAGAACCAAATGCA 459 Query 1613 TCTGTTGCAGCAATTGTAACCTGGCTACCTGATGAGTTATATGGAGGGATTAAGATAAGA 1672 || | ||||||| || ||||| || |||||| |||||||||||||| ||| ||| Sbjct 460 TC---T---GCAATTGCAAGATGGCTTCCAGATGAGAAATATGGAGGGATTATGATTAGA 513 Query 1673 CATTTTAAGAGCATATCGTCTATTGACTGGCATCGTAAAGGAGACTATCTCTCAACAGTG 1732 |||||||||| | ||||| |||||||||||||||||| ||||||||||| || ||||| Sbjct 514 CATTTTAAGAACGTATCGAGTATTGACTGGCATCGTAAGGGAGACTATCTGTCGACAGTC 573 Query 1733 ATGGCATCCGGGGAAACACGGGGAGTGGT-ATTGCACCAACTGTC-AAAACAGAAAACAC 1790 ||||||||||| ||||| || || || || ||| || ||| | || |||| || |||| Sbjct 574 ATGGCATCCGGCGAAACGCGAGGTGTTGTAATT-CATCAAATCTCGAAAA-AGCTTACAC 631 Query 1791 AAAGGCTCCCATTTAAGATTCGTGGACTTCCAGT--CTGTACACTTTTTCATCCCAGCCT 1848 ||| | ||| || ||||| |||||||||||||| ||| || ||||||||||||||| Sbjct 632 AAAAG--CCC-TTCAAGATCCGTGGACTTCCAGTGACTG--CAGTTTTTCATCCCAGCCG 686 Query 1849 TTCTTACTTCTTCGTTGCGACAAGAAAGGACGTGCGTGTTTACAATCTTTTGAAGCCAGG 1908 ||| ||||| ||| | |||||||||||| ||||||||||||||||||| || ||| || Sbjct 687 TTCATACTTGTTCATCGCGACAAGAAAGAACGTGCGTGTTTACAATCTGTTAAAGGTAGA 746 Query 1909 CGAGGCC-ACCAAAAAGCTTGAGACAGGATTGAGAGAAATCTCATCAATGGCGATTCATC 1967 || ||| ||||||||| ||||| ||| |||| |||||||||||| |||||||||||| Sbjct 747 TGA-GCCTGTCAAAAAGCTCGAGACTGGAATGAGGGAAATCTCATCACTGGCGATTCATC 805 Query 1968 CTGGTGGTGATAATCTGATAGTAGGAAGCAAAGAAGGGAAGATGTGTTGGTTTGACATGG 2027 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 806 CTGGTGGTGATAATCTGATAGTAGGAAGTAAAGAAGGGAAGATGTGTTGGTTTGACATGG 865 Query 2028 ATCTATCTTCGAAA-CCATACAAGACTCTCAAGAATCATCCTAAAGACATTACAAATGTG 2086 |||| ||||| ||| || ||||||||||||||||||||||||| ||||| || |||||| Sbjct 866 ATCTTTCTTC-AAAGCCGTACAAGACTCTCAAGAATCATCCTACGGACATCACTAATGTG 924 Query 2087 GCAGTT-CATCGATCATATCCGTTATTTGCTTCGTGCTCGGAGGATTCAACAGCTTATGT 2145 | ||| || || || |||||||| |||||||||| ||| ||||| |||||||||| ||| Sbjct 925 GT-GTTTCACCGTTCGTATCCGTTGTTTGCTTCGTCCTCAGAGGACTCAACAGCTTTTGT 983 Query 2146 TTTCCATGGAATGGTGTATAATGATCTGAACCAGAATCCTCTGATTGTGCCATTGGAGAT 2205 |||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct 984 GTTCCATGGAAAGGTGTATAATGATCTGAAGGAGAATCCTCTGATTGTGCCGTTGGAGAT 1043 Query 2206 TCTAAGAGG---T-C-A-TTCTTCAAAAGG---AGGAGTCTTGGACTGCAAGTTTCATCC 2256 ||||||||| | | | |||||| || || ||||||||||||||||||||||||||| Sbjct 1044 TCTAAGAGGCCATTCTACTTCTTCCAATGGTGGAGGAGTCTTGGACTGCAAGTTTCATCC 1103 Query 2257 GAGACAACCATGGCTATTCACTGCAGGCGCTGACTCTATTATCAAACTCTATTGCCACTA 2316 |||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| Sbjct 1104 CAGACAACCATGGCTATTCACTGCAGGGGCTGACTCAAATATCAAACTCTATTGCCACTA 1163 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 96520680830 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5