BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT2G40925.1

Length=1335
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg483156 jgi|Araly1|483156|fgenesh2_kg.4__2216__AT2G40925.1        1275    0.0  
  Ahg321778 jgi|Araly1|321778|fgenesh1_pm.C_scaffold_4001835           854    0.0  
  Ahg483154 jgi|Araly1|483154|fgenesh2_kg.4__2214__AT2G40920.1         773    0.0  


> Ahg483156 jgi|Araly1|483156|fgenesh2_kg.4__2216__AT2G40925.1
Length=1209

 Score = 1275 bits (690),  Expect = 0.0
 Identities = 811/869 (93%), Gaps = 9/869 (1%)
 Strand=Plus/Plus

Query  470   GCTACTTCTTCGCCTCTGTTCCTGGCTTGCTGTGTTTCCAGTTCGGAACAAAGGCGTGTA  529
             |||||||||| | | |||||||||||||| |||||||||| ||| |||||||||||||||
Sbjct  347   GCTACTTCTTGGACGCTGTTCCTGGCTTGATGTGTTTCCAATTCAGAACAAAGGCGTGTA  406

Query  530   TCTATAACCCTAGCACCAAACAACTCTTGACCTTACCCTCCGTAAAATCCGACATCACAG  589
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct  407   TCTATAACCCTAGCACCAAACAAATCTTGACCTTACCCTCCGTAAAATCCGACATCACAG  466

Query  590   CTCAACAAGGTCAACTGAAGACTACCCAATAC-TATATTGGACGCGATCCTGTTAATGAT  648
             ||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||
Sbjct  467   CTCAACAAGGTCAACTGAAGAGTACCCAATACGT-TATTGGACGCGATCCTGTTAATGAT  525

Query  649   CAATACAAACTAGTCTGCACTATTCTGATATACTCGAAATTGTTTGCAAACATGAGCTCA  708
             |||||||||||| |||||||||||  ||||| |||| ||| ||||||||||||||| |||
Sbjct  526   CAATACAAACTATTCTGCACTATTGAGATATCCTCGCAATGGTTTGCAAACATGAGGTCA  585

Query  709   GAGCATTGGGTCTTCACACTAGAA-CTTGGAGGTTCCTGGAAAAAAGTTGTTCCACTGGG  767
             |||||||||||||||||||||||| | | |||||||||||||||| ||||||||||||||
Sbjct  586   GAGCATTGGGTCTTCACACTAGAAGC-TAGAGGTTCCTGGAAAAAGGTTGTTCCACTGGG  644

Query  768   AAATTATCATCCCCATGCTCCTGCCACAGCAGGACGGTCTATCGATGGAGTAGTACATTA  827
             | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct  645   AGATTATCATCCCCATGCTCCTGCCACAGCAGGACGGTCTATCCATGGAGTAGTACATTA  704

Query  828   TCTAGCCTGGGTTGATTTGTACAAGTGTGCGGTTGTGAGTTTCAACATTAGGTCTGAAGA  887
             |||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||
Sbjct  705   TCTAGCCTGGGTTGATTTGTACAATTGTGCGGTTGTGAGTTTCGACATTATGTCTGAAGA  764

Query  888   GGTTACTACCTTCCTATTACCTCGGAAAATCTGGGATGTGCCTGTGCCTGCACTGATGAT  947
             | ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct  765   GATTAATACCTTCCTATTACCTCAGAAAATCAGGGATGTGCCTGTGCCTGCACTGATGAT  824

Query  948   GAAGGCGGATCTTATAGAGTATGATGGAAAATTAGCAATTTTCAGTCATAGCTACCTTAA  1007
             |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct  825   GAAGGCGGATCTTATAGAGTATGATGGAAAATTAGCTATTTTCAATCATAGCTACCTTAA  884

Query  1008  AGACGAGGGTTTGGTAGAATTATGGGTATTGAAAGACGCTGCTGGGAAGAAGAAATGGTC  1067
             |||||||||||  || || |||||||| |||||||||||||  || | ||||||||||||
Sbjct  885   AGACGAGGGTTCCGTGGATTTATGGGTCTTGAAAGACGCTG--GG-ATGAAGAAATGGTC  941

Query  1068  CAATATGATCCTGGTTTTGCAGCCTTGCCAAAGGCATTTAGTCCATGGCATTGATTTGAT  1127
             ||||| ||  ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  942   CAATAAGAAGCTGGTTTTGCAGCCTTGCCAAAGGCATTTAGTCCATGACATTGATTTGAT  1001

Query  1128  CGTAAAAGGTACAACTCAAGACGGCAAGGTTATACTGTCACCCTTGGAGATGCGTTCTCA  1187
             ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||
Sbjct  1002  CGTAAAAGGTACAACTCAAGACGGCAAGGTTATGCTGGCACCGTTGGAGATGCGTTCTCA  1061

Query  1188  GTTCTACATTCTGTGTT-ATGATGTGCAAAACAATGATTTGAGAAAGGTTGAAATCACAG  1246
              ||||||||||||| || |||||||||||| |||||||||||||||||||||||||| ||
Sbjct  1062  ATTCTACATTCTGT-TTCATGATGTGCAAAGCAATGATTTGAGAAAGGTTGAAATCAAAG  1120

Query  1247  GAGTACCACGCCTTTGGTTGCATAAAGAATGCAATTTTGACTTGAAGTTTATGGATGAGA  1306
             |||| |||||||||||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct  1121  GAGTGCCACGCCTTTGGTTCCATAAAGAATGCTATTTTGACTTGAAGTTTGTGGATGAGA  1180

Query  1307  GTGAGAGCTTCATCTACTTGGAAATTTGA  1335
             ||||||||||||||||| |||||||||||
Sbjct  1181  GTGAGAGCTTCATCTACGTGGAAATTTGA  1209


 Score =  268 bits (145),  Expect = 6e-71
 Identities = 274/330 (83%), Gaps = 33/330 (10%)
 Strand=Plus/Plus

Query  141  tatgaagaggaagagaagaagaagaggaa-TCAAAGATATGTGCAATAGGCACGACTGCG  199
            |||||||| |||| ||||||||||||||| ||    |||||||||| | ||||||||| |
Sbjct  21   TATGAAGAAGAAGGGAAGAAGAAGAGGAAGTC----ATATGTGCAAGAAGCACGACTGTG  76

Query  200  AGATCCCTCCTGATCTCATGATAGAAATTCTTATAAGATTGCC----AA----C-AA--A  248
            |||| ||||| |||||| ||| |||||||||||||||||||||    ||    | ||  |
Sbjct  77   AGATTCCTCCGGATCTCGTGACAGAAATTCTTATAAGATTGCCAAAAAAGTCCCTAATGA  136

Query  249  -G-T------CCT---TTATGAGGTTCAAGTGCGTCTCAAAGCAGTGGTCACCCCTTATC  297
             | |      |||   | ||||||||||||||||||||||||||||||||| |||| |||
Sbjct  137  GGTTCAACAACCTCCCTCATGAGGTTCAAGTGCGTCTCAAAGCAGTGGTCATCCCTCATC  196

Query  298  TCTGGTCGATATTTTTGCAACCGTTTATTTACTTGTGT-A-AC--AC--Gacaacaacaa  351
            ||| |||||||||||||||||||||||||||||   || | ||  ||  |||||||||||
Sbjct  197  TCTTGTCGATATTTTTGCAACCGTTTATTTACTACCGTCACACTCACACGACAACAACAA  256

Query  352  caacaacCACGTCTATACATGTGTTTAGTGGCCAAAGACAAGCAATGTGTTCTACTATCA  411
            |||||||||||||||||||||||||||||| | |||||||| ||| || | |||||||||
Sbjct  257  CAACAACCACGTCTATACATGTGTTTAGTGACGAAAGACAACCAAGGTCTACTACTATCA  316

Query  412  TCAACGTCACCGGACAACACTTGTTTTGTA  441
            |||||||||||||||||||||| |||||||
Sbjct  317  TCAACGTCACCGGACAACACTTCTTTTGTA  346


> Ahg321778 jgi|Araly1|321778|fgenesh1_pm.C_scaffold_4001835
Length=1350

 Score =  854 bits (462),  Expect = 0.0
 Identities = 957/1185 (81%), Gaps = 78/1185 (7%)
 Strand=Plus/Plus

Query  196   TGCGAGATCCCTCCTGATCTCATGATAGAAATTCTTATAAGATTGCCAACAAAGTCCTTT  255
             |||||||| ||| | |||||| |||| |||||| |||| ||||||||| |||||||| | 
Sbjct  199   TGCGAGATTCCTTCGGATCTCTTGATGGAAATTGTTATGAGATTGCCAGCAAAGTCCATG  258

Query  256   ATGAGGTTCAAGTGCGTCTCAAAGCAGTGGTCACCCCTT-ATCTCTGGTCGATATTTTTG  314
              |||||||||||||| |||| ||||||||||||  |||| |||||| |||||||||||||
Sbjct  259   GTGAGGTTCAAGTGCATCTCCAAGCAGTGGTCA-TCCTTCATCTCTTGTCGATATTTTTG  317

Query  315   CAACCGTTTATTTACTTGTGTAACACGacaacaacaacaacaacCACGTCTATACATGTG  374
              |||||||||||||||  ||| ||||||||||||||||  | | || |  ||||||||||
Sbjct  318   TAACCGTTTATTTACTACTGTCACACGACAACAACAAC--C-A-CAAG--TATACATGTG  371

Query  375   TTTAGTGG-CCAAAGACAAGCAA--TGTG-TTCTA--C-TATCATCAACGTCACCGGACA  427
             |||||||| || ||| |  ||||  |||| | |||  | ||||||||||||| || ||||
Sbjct  372   TTTAGTGGACC-AAGGCGGGCAACGTGTGCTGCTATCCTTATCATCAACGTCTCCAGACA  430

Query  428   ACACTTGTTTTGTACTCGTCGACCAAGATTTGAGCATC-CCAGGCT---A--CTTCTTC-  480
             ||||||||| ||   | ||||||||||||||||||||| |  || |   |  ||||||| 
Sbjct  431   ACACTTGTTATG---TGGTCGACCAAGATTTGAGCATCACTGGGATGGGAGGCTTCTTCT  487

Query  481   -GCCT-CTGTTCC-TGGCTTGCTGTGTTTC-CAGTTCGGAACAAAGGCGTGTATCTATAA  536
              |  | ||| ||| ||||||| |||||||| ||| |  ||| |||||| |||||||||||
Sbjct  488   TGAATGCTG-TCCGTGGCTTGTTGTGTTTCTCAG-TAAGAAAAAAGGCATGTATCTATAA  545

Query  537   -CCCTAGCACCAAACAACTCTTGACCTTACCCTCCGTAAAATCCGACATCACAGCTCAAC  595
              ||| | ||| | ||| ||||||||||||||| |  |||||||||||||||  |||||||
Sbjct  546   TCCC-ACCACTAGACAGCTCTTGACCTTACCCGCTATAAAATCCGACATCATTGCTCAAC  604

Query  596   AAGGTCAACTGAA-GACTACCCAATACTATATTGGACGCGATCCTGTTAATGATCAATAC  654
             ||||| ||  ||| || || ||  || ||||| |||| ||||||||||||||||||||||
Sbjct  605   AAGGTGAAAGGAAGGA-TATCCGGTATTATATCGGACACGATCCTGTTAATGATCAATAC  663

Query  655   AAACTAGTCTGCACTATTCTGATATACTC-GAAATTGTTTGCAAACATG-A--GCTCAGA  710
             |||||||||||||| ||| ||| || ||| | | || ||| |||| ||| |  | |||||
Sbjct  664   AAACTAGTCTGCACGATTGTGACATCCTCTGCA-TT-TTT-CAAAAATGTAAAG-TCAGA  719

Query  711   GCATTGGGTCTTCACACTAGAA-CTTGGAGGTTCCTGGAAAAAAGTTGTTCCACTGG-GA  768
             ||||||||||||   ||||||  |  ||||||||||||| ||| |||||||| |||| ||
Sbjct  720   GCATTGGGTCTTTGTACTAGAGGCG-GGAGGTTCCTGGAGAAAGGTTGTTCCGCTGGAGA  778

Query  769   AATTATCATCCCCATGCTCCTGCCACAGCAGGACGGTCTATCGATGGA--G-TAGTACAT  825
             | ||| ||||| |||||||||||||||| ||||| || |||| |||||  | ||||||||
Sbjct  779   A-TTACCATCCTCATGCTCCTGCCACAGTAGGACAGTTTATCAATGGATCGGTAGTACAT  837

Query  826   TATCTAGCCTGGGTTGATTTGTACAAGTGTGCGGTTGTGAGTTTCAACATTAGGTCTGAA  885
             ||| | || ||| ||||| || |||  ||||  |||||||||||| |||| | |||||||
Sbjct  838   TATATGGCTTGGCTTGATATGGACACTTGTGTTGTTGTGAGTTTCGACATGACGTCTGAA  897

Query  886   GAGGTT-ACTACCTTCCTATTACCTC-GGAAAATCTGGGATGTGCCTGTGCCTGCA-CTG  942
             ||| || |||||| ||||| |||||| ||||   | |||||||| || |||||||| || 
Sbjct  898   GAG-TTGACTACCATCCTAGTACCTCAGGAAGC-CGGGGATGTGGCTCTGCCTGCAGCT-  954

Query  943   ATGATGAAGGCGGATCTTATAGAGTATGATGG-AAAATTAGCAATTTTC-AGTCATAGCT  1000
             | ||||||||||| |||||||||||||||||| ||||| |||  ||||| | ||| | | 
Sbjct  955   AGGATGAAGGCGGGTCTTATAGAGTATGATGGGAAAAT-AGCTGTTTTCGA-TCACACCC  1012

Query  1001  ACCTTAAAGACGAGGGTTTGGTAGAATTATGGGTATTGAAAGACGCTGCTGGGAAGAAGA  1060
             |||| |||||  || ||||||| || ||||||||||||||||||||||  || |||||| 
Sbjct  1013  ACCTCAAAGAAAAGTGTTTGGTGGATTTATGGGTATTGAAAGACGCTG--GG-AAGAAGG  1069

Query  1061  AATGGTCCAATATGATCCTGGTTTTGCAGCCTTGCCAAAGGCATTTAGTCCATG--G-CA  1117
             ||||||| || | ||  ||| ||||  ||||||| |||| ||||||||||||||  | ||
Sbjct  1070  AATGGTCGAAGAAGAGGCTGTTTTTAAAGCCTTGTCAAAAGCATTTAGTCCATGATGACA  1129

Query  1118  TTGATTTGATCGTAAAAGGTACAACTCAAGACGGCAAGGTTATACT-GTCACCCTTGGAG  1176
             ||||  |||||||||||||||||||| |||| ||||||||||| || | ||||  || ||
Sbjct  1130  TTGAACTGATCGTAAAAGGTACAACTGAAGATGGCAAGGTTAT-CTTGGCACCGGTGAAG  1188

Query  1177  ATGCGTTCTCAGTTCTACATTCTGTGTTATGATGTGCAAAACAATGATTTGAGAAAGGTT  1236
             |||| |||||| ||||| ||||||||||| ||| ||  || ||||||  |||| ||||||
Sbjct  1189  ATGCATTCTCAATTCTATATTCTGTGTTACGATATGGTAAGCAATGACCTGAGGAAGGTT  1248

Query  1237  GAAATCACAGGAGTACCACGCC-TTTGGTT-GCATAAAGAATGCAATTTTGACTTGAAGT  1294
              |||||| |||||||| | | | ||||||| |  ||| || ||| |||| ||||||||||
Sbjct  1249  AAAATCAAAGGAGTACTA-GACATTTGGTTTGG-TAAGGAGTGCTATTTCGACTTGAAGT  1306

Query  1295  --T-TATGGATGAGAGTGAGAGCT-TCATCTACTTGGAAATTTGA  1335
               | |||||||||||||||| ||  ||||||||||||||| ||||
Sbjct  1307  ACTCTATGGATGAGAGTGAG-GCCGTCATCTACTTGGAAACTTGA  1350


> Ahg483154 jgi|Araly1|483154|fgenesh2_kg.4__2214__AT2G40920.1
Length=1362

 Score =  773 bits (418),  Expect = 0.0
 Identities = 946/1183 (80%), Gaps = 107/1183 (9%)
 Strand=Plus/Plus

Query  223   GAAATTCTTATAAGATTGCCAACAAAGTCCTTTATGAGGTTCAAGTGCGTCTCAAAGCAG  282
             |||||||| || |||||||||||| ||||| | |||||||||||||||||||| ||||| 
Sbjct  181   GAAATTCTAATGAGATTGCCAACACAGTCCCTGATGAGGTTCAAGTGCGTCTCTAAGCAC  240

Query  283   TGGTCACCCCTTATCTCTGGTCGATATTTTTGCAACCGTTTATTTACTTGTGTAACACGa  342
             |||||| ||||||| | | |||||||||||||||||| |||||||||     | ||  | 
Sbjct  241   TGGTCATCCCTTATTTTTAGTCGATATTTTTGCAACCTTTTATTTAC-----T-AC-GGT  293

Query  343   caacaacaacaacaacCACGTCTATACATGTGTTTAGTGGCCAAAGACAAGCA----AT-  397
             | || || |||||||||||| |||||||||||||||||||   | | |  |||    || 
Sbjct  294   C-AC-ACGACAACAACCACGCCTATACATGTGTTTAGTGGATGATGGCGGGCACCGTATA  351

Query  398   GTG-T-TCTACTATCATCAACGTCACCGGACAACACTTGTTTTGTAC-TCGTCGACCAAG  454
              || | |||| |||||||| |||| || ||||||||||||| ||| | ||||||||||||
Sbjct  352   CTGCTATCTA-TATCATCACCGTCTCCAGACAACACTTGTTATGT-CGTCGTCGACCAAG  409

Query  455   ATTTGAGCATCCCAGG-CT---A--CTTCTTC--G--CCTCTGTTCCTGGCTTGCTGTG-  503
             ||||||||||||||||  |   |  |||||||  |  | | ||||| ||||||| |||| 
Sbjct  410   ATTTGAGCATCCCAGGAATGGGAGGCTTCTTCTTGAACAT-TGTTCGTGGCTTGATGTGT  468

Query  504   TT-TCCAGTTCGGAACAAAGGCGTGTATCTAT-A----A-C-CCTA-----GCACCAAAC  550
             || ||| | | | || |||||||||||||||| |    | | || |     |||||||||
Sbjct  469   TTCTCCCG-TAGTAA-AAAGGCGTGTATCTATAACCCCAGCACCCAGGGCCGCACCAAAC  526

Query  551   AACTCTTGACCTTACCCT-CCGTAAAATCCGACATCACAGCTCAACAAGGTCAACTGAAG  609
             |||||||||||||| ||| || ||||||||||||||  ||||||||||||||||  ||||
Sbjct  527   AACTCTTGACCTTA-CCTGCCATAAAATCCGACATCGTAGCTCAACAAGGTCAAAAGAAG  585

Query  610   -A-C-TACCCAATACTATATTGGACGCGATCCTGTTAATGATCAATACAAACTAGTCTGC  666
              | | |||||  || || || |||| ||| ||||||| ||||||||||||||||||||||
Sbjct  586   CATCTTACCCGGTATTACATCGGACACGACCCTGTTAGTGATCAATACAAACTAGTCTGC  645

Query  667   ACTATT-CTGATATACTCGAAATT-----GTTT-GC-AAACATG-AGCTCAGAGCATTGG  717
             ||  || | ||||| ||||  |||     |||| || || | || || |||||||| |||
Sbjct  646   ACGGTTGC-GATATCCTCGCCATTGCCACGTTTGGCTAATC-TGAAG-TCAGAGCACTGG  702

Query  718   GTCTTCACACTAGAA-CTTGGAGGTTCCTGGAAAAAAGTTGTTCCACTGGGAAATTATCA  776
             |||||| |||||||| | ||||||||| |||||||| ||||||||||||| |||||||| 
Sbjct  703   GTCTTCGCACTAGAAGC-TGGAGGTTCATGGAAAAAGGTTGTTCCACTGGAAAATTATCG  761

Query  777   TCCCCATGCTCCTGCCACAGC-AGGACGGTCTATCGA-TGG---AGTAGTACATTATCTA  831
             ||  ||||| ||| || | || ||||||||||| | | |||   |||||||| |||| | 
Sbjct  762   TCATCATGCCCCTTCC-CCGCTAGGACGGTCTA-CCAGTGGATCAGTAGTACGTTATATG  819

Query  832   GCCTGGGTTGAT-TTGTACAAGTGTGCGGTTGTGAGTTTCAACATTAGGTCTGAAGAGGT  890
             ||||||  ||||  | || || |||| ||||||||||||| |||||||||||||| || |
Sbjct  820   GCCTGGCCTGATAAT-TATAATTGTGTGGTTGTGAGTTTCGACATTAGGTCTGAACAGAT  878

Query  891   TACTACCTTCCTATTACCTCGGAAAAT--C-TGGGATGTGCCTGTGCCTGCACTGATGAT  947
              |||| | ||| | ||||| || | ||  |     ||| || |||||||||| | | |||
Sbjct  879   GACTATCATCCCAGTACCTGGGGAGATCGCACCTCATGAGCATGTGCCTGCAGTTACGAT  938

Query  948   GAAGGCGGATCTTATAGAGTATGAT-GGAAAATTAGCAATTTTC-AGTCATAGC-TACCT  1004
             || |||||||||||||||||||| | |||| | ||||||| ||| | ||||| | |||||
Sbjct  939   GAGGGCGGATCTTATAGAGTATGGTGGGAAGA-TAGCAATATTCTA-TCATA-CTTACCT  995

Query  1005  TAAAGACGAGGGTT-TG-GTAGAATTATGGGTATTGAAAGACGCTGCTGGGAAGAA-GAA  1061
             |||| |  ||||||  | ||    |||||||| ||| |||||  |  ||||||||| | |
Sbjct  996   TAAAAAAAAGGGTTCCGCGT--CTTTATGGGTTTTGGAAGAC-AT--TGGGAAGAATG-A  1049

Query  1062  ATGGTCCAATATGATC-CTGGTTTTGCAGCCTTGCCAAAGGCATTTAGTCCATGGCATTG  1120
             |||||| || | || | ||||||||||||||||| ||||||||||||||| | | |||||
Sbjct  1050  ATGGTCGAAAAAGA-CTCTGGTTTTGCAGCCTTGTCAAAGGCATTTAGTCAAAGACATTG  1108

Query  1121  ATTTGATCGTAAAAGGTACAACTCAAGACGGCAAGGTTATAC-TGTCACCCTTGGAGATG  1179
             | |||||||||||||||||||| |||||||||||||| || | || |||| |||||||||
Sbjct  1109  AATTGATCGTAAAAGGTACAACGCAAGACGGCAAGGTAAT-CTTGGCACCGTTGGAGATG  1167

Query  1180  CGTTCTCAG-TTCTACATTCTGTGTTATGA-TGTGCAAAACAATGATTTGAGAAAGGTTG  1237
             | ||||| | ||||||||||||| ||| || | |||||| |||||| |||||||||||||
Sbjct  1168  CATTCTC-GATTCTACATTCTGTATTACGACT-TGCAAAGCAATGACTTGAGAAAGGTTG  1225

Query  1238  AAATCACAGGAGTACCACGCCTTTGG--T--TGCATAAAGAATGCAATTTTGACTTGAAG  1293
             |||||| |||||||||||||||||||  |  | |||||||||||| ||||| ||||||| 
Sbjct  1226  AAATCAAAGGAGTACCACGCCTTTGGCCTACT-CATAAAGAATGCTATTTTTACTTGAA-  1283

Query  1294  TT-TATGGATGAGAGTGAGAGCTTCATCTACTTGGAAATTTGA  1335
             || ||||||||||||||||||||||||||||||||||| ||||
Sbjct  1284  TTCTATGGATGAGAGTGAGAGCTTCATCTACTTGGAAACTTGA  1326



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 49941021270


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5