BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G41140.1
Length=2148
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483182 jgi|Araly1|483182|fgenesh2_kg.4__2242__AT2G41140.1 3290 0.0
Ahg486115 jgi|Araly1|486115|fgenesh2_kg.5__2107__AT3G56760.1 1801 0.0
> Ahg483182 jgi|Araly1|483182|fgenesh2_kg.4__2242__AT2G41140.1
Length=2019
Score = 3290 bits (1781), Expect = 0.0
Identities = 1942/2021 (96%), Gaps = 6/2021 (0%)
Strand=Plus/Plus
Query 101 AATTCATGGGGATCTGTCATGGAAAACCCGTCG---AGCAACAATCAAAAAGCCTCCCAG 157
|||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||
Sbjct 1 AATTCATGGGGATCTGTCATGGTAAACCCATCGAACAGCAACAATCAAAAAGCCTCCCAG 60
Query 158 TTTCCGGCGAAACTA-ATGAAGCTCCGACGAATTCACAGCCACCGGCGAAATCCTCTGGC 216
||||||||||||| | ||||||||||||||||||||||||||||||||||||| || |||
Sbjct 61 TTTCCGGCGAAAC-AGATGAAGCTCCGACGAATTCACAGCCACCGGCGAAATCTTCCGGC 119
Query 217 TTTCCGTTTTATAGCCCGAGTCCTGTACCTAGCTTATTCAAATCCTCACCATCTGTATCT 276
||||||||||| ||||| |||||||||||||||||||||||||||||||| || ||||||
Sbjct 120 TTTCCGTTTTACAGCCCAAGTCCTGTACCTAGCTTATTCAAATCCTCACCTTCCGTATCT 179
Query 277 TCTAGCGTGAGCTCAACGCCTCTTCGTATCTTCAAGAGACCTTTCCCTCCTCCTTCTCCT 336
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TCGAGCGTGAGCTCAACGCCTCTTCGTATCTTCAAGAGACCTTTCCCTCCTCCTTCTCCT 239
Query 337 GCTAAGCACATACGAGCTTTCCTCGCGCGTCGCTATGGCTCTGTCAAGCCTAATGAGGTT 396
|||||||||||||||||||||||| |||||||||| |||||||||||||| |||| ||||
Sbjct 240 GCTAAGCACATACGAGCTTTCCTCACGCGTCGCTACGGCTCTGTCAAGCCCAATGCGGTT 299
Query 397 TCGATTCCCGAAGGTAAAGAATGTGAGATCGGTCTCGATAAGAGTTTTGGCTTTTCAAAA 456
|||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| |||
Sbjct 300 TCGATTCCCGAAGGCAAAGAGTGTGAGATTGGTCTCGATAAGAGTTTTGGGTTTTCGAAA 359
Query 457 CAGTTTGCTTCACACTATGAGATTGATGGTGAGGTGGGTCGTGGACATTTTGGATATACT 516
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 360 CAGTTTGCTTCACACTACGAGATTGATGGTGAGGTGGGTCGTGGACATTTTGGGTATACT 419
Query 517 TGCTCTGCTAAGGGTAAAAAAGGTAGCTTGAAAGGTCAAGAAGTTGCTGTTAAAGTTATT 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TGCTCTGCTAAGGGTAAAAAAGGTAGCTTGAAAGGTCAAGAAGTTGCTGTTAAAGTTATT 479
Query 577 CCTAAATCAAAGATGACAACTGCAATTGCGATTGAGGATGTTAGTAGAGAAGTGAAGATG 636
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 480 CCTAAATCAAAGATGACAACTGCAATTGCCATTGAGGATGTTAGTAGAGAAGTGAAGATG 539
Query 637 TTGCGGGCTTTGACTGGTCATAAGAACCTAGTCCAGTTCTATGACGCGTTTGAAGATGAT 696
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 540 TTGCGGGCTTTGACTGGTCATAAGAACCTAGTCCAGTTTTATGACGCGTTTGAAGATGAT 599
Query 697 GAAAATGTTTATATTGTCATGGAATTATGCAAAGGTGGTGAACTCTTGGACAAAATACTT 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 GAAAATGTTTATATTGTCATGGAATTATGCAAAGGTGGTGAACTCTTGGACAAAATACTT 659
Query 757 CAAAGGGGTGGAAAATACTCCGAAGATGATGCTAAAAAAGTTATGGTTCAGATTCTCAGT 816
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 660 CAAAGGGGTGGAAAATACTCAGAAGATGATGCTAAAAAAGTTATGGTTCAGATTCTCAGT 719
Query 817 GTTGTGGCTTACTGTCATCTACAAGGTGTGGTTCACCGTGACCTTAAACCCGAGAACTTT 876
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 720 GTTGTGGCTTACTGTCATCTACAAGGTGTTGTTCACCGTGACCTTAAACCCGAGAACTTT 779
Query 877 CTTTTCTCTACCAAGGATGAGACTTCTCCTCTGAAAGCAATTGATTTTGGTCTTTCTGAC 936
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 CTTTTCTCAACGAAGGATGAGACTTCTCCTCTGAAAGCAATTGATTTTGGTCTTTCTGAT 839
Query 937 TATGTCAAGCCAGACGAGAGGTTGAATGATATTGTAGGGAGTGCTTACTATGTGGCCCCG 996
|||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct 840 TATGTCAAGCCAGACGAGAGGTTGAATGATATTGTAGGAAGTGCATACTACGTGGCCCCG 899
Query 997 GAAGTTTTACACCGTACATATGGAACAGAAGCTGACATGTGGAGTATAGGAGTGATTGCT 1056
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 900 GAAGTTTTACACCGTACATATGGAACTGAAGCTGACATGTGGAGCATAGGAGTGATTGCT 959
Query 1057 TATATTCTTCTCTGTGGCAGTCGACCCTTTTGGGCCCGTACTGAATCCGGAATCTTTCGA 1116
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 960 TATATTCTTCTCTGTGGCAGTCGACCCTTCTGGGCCCGTACTGAATCCGGAATTTTTCGA 1019
Query 1117 GCTGTACTAAAGGCAGAACCGAATTTTGAAGAAGCTCCTTGGCCTTCTCTATCACCCGAA 1176
||||| |||||||||||||||||||||||||||||||||||||| || |||||||| ||
Sbjct 1020 GCTGTCCTAAAGGCAGAACCGAATTTTGAAGAAGCTCCTTGGCCATCCCTATCACCTGAC 1079
Query 1177 GCTGTAGATTTTGTGAAGAGATTGCTAAACAAAGATTACCGTAAAAGACTAACTGCGGCC 1236
||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||
Sbjct 1080 GCTGTAGATTTTGTGAAAAGATTGCTTAACAAAGATTACCGTAAACGACTAACTGCGGCC 1139
Query 1237 CAGGCTTTGTGTCATCCCTGGCTGGTTGGCTCGCATGAACTAAAGATTCCATCTGATATG 1296
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1140 CAGGCTTTGTGTCATCCCTGGCTGGTTGGCTCGCATGAACTAATGATTCCATCTGATATG 1199
Query 1297 ATCATATACAAGCTTGTAAAAGTGTACATAATGTCAACTTCATTGAGAAAATCGGCTTTA 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1200 ATCATATACAAGCTTGTAAAAGTGTACATAATGTCAACTTCATTGAGAAAATCAGCTTTA 1259
Query 1357 GCGGCTCTTGCCAAAACATTAACTGTACCGCAGTTAGCGTATCTTCGGGAGCAATTCACA 1416
|||||||||||||| ||||||||||||||||||||||| ||||| | |||||||||||||
Sbjct 1260 GCGGCTCTTGCCAAGACATTAACTGTACCGCAGTTAGCTTATCTGCAGGAGCAATTCACA 1319
Query 1417 TTGTTGGGGCCAAGCAAAAATGGATATATCTCGATGCAGAATTACAAAACAGCAATCCTA 1476
|||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct 1320 TTGTTGGGGCCAAGCAAAAATGGATATATCTCTATGCAAAACTACAAAACAGCAATCCTA 1379
Query 1477 AAGAGTTCAACAGATGCTATGAAGGATTCTCGAGTGTTTGATTTTGTTCACATGATAAGT 1536
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1380 AAGAGTTCAACAGATGCTATGAAGGATTCACGAGTGTTAGATTTTGTTCACATGATAAGT 1439
Query 1537 TGTCTTCAATACAAGAAACTAGACTTTGAAGAGTTTTGTGCTTCAGCATTAAGCGTTTAT 1596
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1440 TGTCTTCAATACAAGAAACTAGATTTTGAAGAGTTTTGTGCTTCAGCATTAAGCGTTTAT 1499
Query 1597 CAGCTCGAAGCAATGGAGACATGGGAGCAACATGCACGGCGTGCTTACGAGTTGTTTGAG 1656
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 CAGCTCGAAGCAATGGAAACATGGGAGCAACATGCACGGCGTGCTTACGAGTTGTTTGAG 1559
Query 1657 AAAGACGGGAATAGGCCCATCATGATTGAAGAACTTGCATCGGAACTCGGACTAGGGCCA 1716
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1560 AAAGACGGGAATAGACCCATCATGATTGAAGAACTTGCATCGGAACTCGGACTCGGGCCA 1619
Query 1717 TCAGTGCCGGTGCACGTTGTTCTTCAGGATTGGATAAGACATTCTGATGGCAAACTTAGT 1776
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1620 TCAGTGCCGGTGCACGTTGTTCTCCAGGATTGGATAAGACATTCTGATGGCAAGCTTAGT 1679
Query 1777 TTCTTAGGGTTTGTCAGATTGCTACATGGCGTGTCTTCTCGGACCTTACAAAAAGCTTAG 1836
|||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1680 TTCTTAGGCTTTGTCAGATTACTACATGGCGTGTCTTCCCGGACCTTACAAAAAGCTTAG 1739
Query 1837 AGTAACGCCATTGTTAGATGAGAAAAGATGCAACTAGGTGGAGTAGATCTGGTTTCTTCT 1896
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1740 AGTAACGCCATTGTTAGATGAGAAAAGATGCGACTAGGTGGAGTAGATCTGGTTTCTTCT 1799
Query 1897 TTCCTCTCCACTTCTTGATAGtttttttagttttctttttCTATTCATGGTTAAGCTTCT 1956
|| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1800 TTTCTTTCCACTTCTTGATAGTTTTTTTAGTTTTCTTTTTCTATTCATGGGTAAGCGTCT 1859
Query 1957 GAGTCAAAGATTCGATAATTATGTCTGTGAGTGTATTTGTGTGTGGTGGGAAGGAAAGGT 2016
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1860 GAGTCAAAGATTCGATAATTATGTCTGTGAGTGTATGTGTGTGTGGTGGGAAGGAAAAGT 1919
Query 2017 TTATGAAGAAGAGGAATGTACAGAATGAGACATATCCGATTGGTGTTTTTAATCCAGTGA 2076
||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct 1920 TTATGAAGAAGAGGAATGTACAGAATGAGACATATCCGATTATTGTTTT-AATCCAGTGA 1978
Query 2077 TGTTTACGTGTGAAGCACTCTTTTAATGGCAGCCGGAAAAA 2117
|||||||||||||||||||||||||||| | ||||||||||
Sbjct 1979 TGTTTACGTGTGAAGCACTCTTTTAATGACCGCCGGAAAAA 2019
> Ahg486115 jgi|Araly1|486115|fgenesh2_kg.5__2107__AT3G56760.1
Length=1813
Score = 1801 bits (975), Expect = 0.0
Identities = 1435/1657 (87%), Gaps = 32/1657 (2%)
Strand=Plus/Plus
Query 202 GCGAAATCCTCTGGCTTTCCGTTTTATAGCCCGAGTCC-TGTACCTAGCT-TATTCAAAT 259
|||||||| || ||||||||||||||||| || ||||| | ||||||| | | ||||||
Sbjct 97 GCGAAATCTTCAGGCTTTCCGTTTTATAGTCCAAGTCCAT-TACCTAG-TCTCTTCAAAA 154
Query 260 CCTCACCA--TCTGT-ATCTTCTAGCGTGAGCTCAACGCCTCTTCGTATCTTCAAGAGAC 316
|||||||| | ||| ||| || ||||||||||| ||||| ||||||||||||||| |||
Sbjct 155 CCTCACCAGCTGTGTCATCCTCGAGCGTGAGCTCCACGCCACTTCGTATCTTCAAGCGAC 214
Query 317 CTTTCCCTCCTCCTTCTCCTGCTAAGCACATACGAGCTTTCCTCGCGCGTCGCT-ATGGC 375
||||||| ||||| || || |||||||| ||||||||| ||||||||||||| | | ||
Sbjct 215 CTTTCCCACCTCCCTCACCAGCTAAGCATATACGAGCTCTCCTCGCGCGTCG-TCACGGT 273
Query 376 TCTGTCAAGCCTAATGAGGTTTCGATTCCC-GAAGGTAAAGAATGTGAGATCGGTCTCGA 434
| ||| ||||| ||||| | ||||| |||| ||||||| || |||||| | || || ||
Sbjct 274 TTTGTTAAGCCCAATGAAGCTTCGA-TCCCTGAAGGTAGTGAGTGTGAGGTTGGCCTTGA 332
Query 435 TAAGAGTTTTGGCTTTTCAAAACAGTTTGCTTCACACTATGAGATTGATGGTGAGGTGGG 494
|||| ||||| || || || ||||||||||||||||| ||||||||||||||||||||
Sbjct 333 CAAGAAATTTGGGTTCTCTAAGCAGTTTGCTTCACACTACGAGATTGATGGTGAGGTGGG 392
Query 495 TCGTGGACATTTTGGATATACTTGCTCTGCTAAGGGTAAAAAAGGTAGCTTGAAAGGTCA 554
||| || |||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 393 TCGAGGGCATTTTGGGTATACTTGCTCTGCTAAGGGGAAAAAAGGTAGCTTGAAAGGTCA 452
Query 555 AGAAGTTGCTGTTAAAGTTATTCCTAAATCAAAGATGACAACTGCAATTGCGATTGAGGA 614
||| || ||||| ||||||||||| ||||| |||||||| || |||||||| ||||||||
Sbjct 453 AGATGTGGCTGTCAAAGTTATTCCCAAATCCAAGATGACTACGGCAATTGCAATTGAGGA 512
Query 615 TGTTAGTAGAGAAGTGAAGATGTTGCGGGCTTTGACTGGTCATAAGAACCTAGTCCAGTT 674
|||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 513 TGTTAGAAGAGAAGTGAAGATATTGCGGGCTTTGACTGGTCACAAGAACCTAGTCCAGTT 572
Query 675 CTATGACGCGTTTGAAGATGATGAAAATGTTTATATTGTCATGGAATTATGCAAAGGTGG 734
||||||||| || |||||||||||||||||||| ||||| ||||| |||||| |||| ||
Sbjct 573 CTATGACGCCTTCGAAGATGATGAAAATGTTTACATTGTGATGGAGTTATGCCAAGGCGG 632
Query 735 TGAACTCTTGGACAAAATACTTCAAAGGGGTGGAAAATACTCCGAAGAT-GATGCTAAAA 793
|||||| |||||||| |||||||||||||| || |||||||| |||| | ||||||||||
Sbjct 633 TGAACTTTTGGACAAGATACTTCAAAGGGGAGGCAAATACTCAGAAG-TAGATGCTAAAA 691
Query 794 AAGTTATGGTTCAGATTCTCAGTGTTGTGGCTTACTGTCATCTACAAGGTGTGGTTCACC 853
|||| |||||||||||||| ||||| || || ||||||||||| ||||| |||||||| |
Sbjct 692 AAGTAATGGTTCAGATTCTTAGTGTAGTAGCCTACTGTCATCTTCAAGGCGTGGTTCATC 751
Query 854 GTGACCTTAAACCCGAGAACTTTCTTTTCTCTACCAAGGATGAGACTTCTCCTCTGAAAG 913
||||||| ||||| ||||| ||||| ||| |||| ||||||||| |||||||||||||||
Sbjct 752 GTGACCTCAAACCAGAGAATTTTCTCTTCACTACAAAGGATGAGTCTTCTCCTCTGAAAG 811
Query 914 CAATTGATTTTGGTCTTTCTGACTATGTCAAGCCAGACGAGAGGTTGAATGATATTGTAG 973
| |||||||||||||| ||||||||||||| |||||| |||||||||||||| |||||||
Sbjct 812 CCATTGATTTTGGTCTCTCTGACTATGTCAGGCCAGATGAGAGGTTGAATGACATTGTAG 871
Query 974 GGAGTGCTTACTATGTGGCCCCGGAAGTTTTACACCGTACATATGGAACAGAAGCTGACA 1033
| |||||||| || |||||||| |||||||||||||||||||||||||| || || || |
Sbjct 872 GAAGTGCTTATTACGTGGCCCCTGAAGTTTTACACCGTACATATGGAACTGAGGCAGATA 931
Query 1034 TGTGGAGTATAGGAGTGATTGCTTATATTCTTCTCTGTGGCAGTCGACCCTTTTGGGCCC 1093
|||||||||| ||||||||||||||||| ||||||||||| || || || ||||||||||
Sbjct 932 TGTGGAGTATTGGAGTGATTGCTTATATACTTCTCTGTGGTAGCCGGCCATTTTGGGCCC 991
Query 1094 GTACTGAATCCGGAATCTTTCGAGCTGTAC-TAAAGGCAGAACCGAATTTTGAAGAAGCT 1152
|| ||||||| |||||||| |||||||| | |||| |||||||| ||||| |||||||||
Sbjct 992 GTTCTGAATCTGGAATCTTCCGAGCTGTTCTTAAA-GCAGAACCCAATTTCGAAGAAGCT 1050
Query 1153 CCTTGGCCTTCTCTATCACCCGAAGCTGTAGATTTTGTGAAGA-GATTGCTAAACAAAGA 1211
|||||||| ||| | ||||| || ||||||||||||||||| | | ||| |||| |||||
Sbjct 1051 CCTTGGCCATCTATTTCACCTGACGCTGTAGATTTTGTGAA-ACGTTTGTTAAATAAAGA 1109
Query 1212 TTACCGTAAAAGACTAACTGCGGCCCAGGCTTTGTGTCATCCCTGGCTGGTTGGCTCGCA 1271
||||||||| ||||||||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct 1110 TTACCGTAAGAGACTAACTGCTGCACAGGCTTTGTGCCATCCTTGGCTTGTTGGCTCGCA 1169
Query 1272 TGAACTAAAGATTCCATCTGATATGATCATATACAAGCTTGTAAAAGTGTACATAATGTC 1331
|||| ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1170 TGAATTAAAGATACCATCTGATATGATCATTTACAAGCTTGTAAAAGTATACATAATGTC 1229
Query 1332 AACTTCATTGAGAAAATCGGCTTTAGCGGCTCTTGCCAAAACATTAACTGTACCGCAGTT 1391
| || ||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
Sbjct 1230 GTCGTCTTTGAGAAAATCGGCTTTAGCGGCTCTTGCCAAAACTTTAACAGTACCGCAGCT 1289
Query 1392 -AGCGTATCTT-CGGGAGCAATTCACAT-TGTTGGGGCCAAGCAAAAATGGATATATCTC 1448
| | ||| || | ||||| || | || |||| || || |||||||| |||||||||||
Sbjct 1290 GA-CTTAT-TTGCAAGAGCAGTTTA-ATCTGTTAGGACCGAGCAAAAACGGATATATCTC 1346
Query 1449 GATGCAGAATTACAAAACAGCAATCCTAAAGAGTTCAACAGATGCTATGAAGGATTCTCG 1508
||||||||||||||||||||| ||| | ||||| || ||||| |||| |||||||| ||
Sbjct 1347 GATGCAGAATTACAAAACAGCTATCTTGAAGAGCTCCACAGAAGCTACAAAGGATTCACG 1406
Query 1509 AGTGTTTGATTTTGTTCACATGATAAGTTGTCTTCAATACAAGAAACTAGACTTTGAAGA 1568
||| || |||||||| |||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1407 AGTCTTGGATTTTGTACACATGATTAGTTGTCTTCAGTACAAGAAACTAGACTTTGAAGA 1466
Query 1569 GTTTTGTGCTTCAGCATTAAGCGTTTATCAGCTCGAAGCAATGGAGACATGGGAGCAACA 1628
|||||| |||||||| ||||| ||||||||||| ||||||||||| || |||||||||||
Sbjct 1467 GTTTTGCGCTTCAGCTTTAAGTGTTTATCAGCTAGAAGCAATGGAAACTTGGGAGCAACA 1526
Query 1629 TGCACGGCGTGCTTACGAGTTGTTTGAGAAAGACGGGAATAG-GCCCATCATGATTGAAG 1687
|||||| | ||| || |||||||||||||| || ||||| || | | || ||||| ||||
Sbjct 1527 TGCACGCCATGCATATGAGTTGTTTGAGAAGGATGGGAACAGAGTC-ATTATGATCGAAG 1585
Query 1688 AACTTGC-ATCGGAACTCGGACTAGGGCCATCAGTGCCGGTGCACGTTGTTCTTCAGGAT 1746
||||||| | ||||||||||||| || ||||| ||||| || || ||||||||||| |||
Sbjct 1586 AACTTGCCA-CGGAACTCGGACTCGGTCCATCGGTGCCTGTTCAGGTTGTTCTTCAAGAT 1644
Query 1747 TGGATAAGACATTCTGATGGCAAACTTAGTTTCTTAGGGTTT-GTCAGATTGCT-ACATG 1804
|||||||||||||||||||| || || |||||||| |||||| |||||| | || ||| |
Sbjct 1645 TGGATAAGACATTCTGATGGGAAGCTAAGTTTCTT-GGGTTTTGTCAGACT-CTTACACG 1702
Query 1805 GCGTGTCTTCTCGGACCTTACAAAAAGCTTAGAGTAA 1841
||||||| ||| | || || || ||||| |||| |||
Sbjct 1703 GCGTGTCCTCTAGAACATTGCAGAAAGCGTAGA-TAA 1738
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80827499890
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5