BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G41860.1 Length=1895 Score E Sequences producing significant alignments: (Bits) Value Ahg483269 jgi|Araly1|483269|fgenesh2_kg.4__2329__AT2G41860.2 2551 0.0 Ahg938735 jgi|Araly1|938735|scaffold_502926.1 1256 0.0 Ahg485540 jgi|Araly1|485540|fgenesh2_kg.5__1532__AT3G51850.1 457 2e-127 > Ahg483269 jgi|Araly1|483269|fgenesh2_kg.4__2329__AT2G41860.2 Length=1596 Score = 2551 bits (1381), Expect = 0.0 Identities = 1525/1596 (96%), Gaps = 3/1596 (0%) Strand=Plus/Plus Query 1 ATGGGAAATTGTTGTGGAACGGCTGGATCGTTGATTC--AA-GATAAGCAGAAGAAAGGT 57 ||||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||| Sbjct 1 ATGGGGAATTGTTGTGGAACGGCTGGATCGTTGATTCAAAACGATAAACAGAAGAAAGGT 60 Query 58 TTTAAATTGCCAAATCCTTTCTCAAACGAGTACGGCAACCACCACGATGGCCTTAAGCTT 117 |||||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||| Sbjct 61 TTTAAATTGCCAAATCCTTTTTCAAACGATTACGGTAACCACCACGATGGCCTGAAGCTT 120 Query 118 ATCGTGTTGAAGGAACCAACGGGTCATGAGATCAAGCAGAAATATAAATTAGGTCGTGAG 177 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 121 ATCGTGTTGAAGGAACCAACGGGTCACGAGATCAAGCAGAAATACAAATTAGGTCGTGAG 180 Query 178 TTAGGTCGAGGAGAGTTCGGTGTGACGTATCTGTGCACCGAGATCGAGACCGGAGAGATT 237 |||||||||||||||| || || |||||||| ||||||||||| ||||||||||||||| Sbjct 181 CTAGGTCGAGGAGAGTTTGGGGTCACGTATCTATGCACCGAGATTGAGACCGGAGAGATT 240 Query 238 TTCGCATGCAAATCAATCTTAAAGAAGAAGCTGAAAACGTCGATTGATATAGAGGACGTT 297 |||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||| Sbjct 241 TTCGCATGCAAATCGATTTTAAAGAAGAAGCTGAAAACGTCGATTGATATTGAGGACGTT 300 Query 298 AAGAGAGAAGTTGAGATCATGAGGCAAATGCCTGAACATCCTAATATTGTTACTTTGAAA 357 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 301 AAGAGAGAAGTTGAGATCATGAGGCAAATGCCTGAGCATCCTAATATTGTTACTTTGAAA 360 Query 358 GAGACTTATGAGGATGATAAAGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGCGGTGAG 417 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 361 GAGACTTATGAGGATGATAAAGCTGTTCATTTGGTTATGGAGCTTTGTGAAGGCGGTGAG 420 Query 418 CTTTTCGATAGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCTGCTGCTTCGGTTATT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CTTTTCGATAGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCTGCTGCTTCGGTTATT 480 Query 478 AAAACGATCATCGAGGTTGTTCAGATGTGTCATAAGCATGGAGTAATGCACAGAGATTTA 537 || |||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| Sbjct 481 AAGACGATCATCGAGGTTGTTCAGATGTGCCATAAGCATGGAGTCATGCACAGAGACTTA 540 Query 538 AAACCTGAGAACTTCTTGTTTGCAAACAAGAAGGAAACTGCATCTTTGAAGGCTATTGAT 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AAACCTGAGAACTTCTTGTTTGCAAACAAGAAGGAAACTGCATCTTTGAAGGCTATTGAT 600 Query 598 TTTGGTCTCTCTGTTTTCTTTAAACCAGGCGAGAGATTTAACGAAATTGTTGGGAGTCCT 657 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 601 TTTGGTCTCTCTATTTTCTTTAAACCAGGCGAGAGATTTAACGAAATCGTTGGGAGTCCT 660 Query 658 TACTACATGGCTCCTGAGGTATTAAGGAGGAGTTATGGACAAGAAATTGACATTTGGAGC 717 || ||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 661 TATTACATGGCTCCCGAGGTATTAAGGCGGAGTTATGGACAAGAAATCGACATTTGGAGC 720 Query 718 GCAGGAGTGATTCTTTACATATTGCTCTGTGGTGTTCCACCTTTTTGGGCAGAAACCGAA 777 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 721 GCAGGAGTGATTCTTTACATTTTGCTCTGTGGTGTTCCACCTTTTTGGGCAGAAACCGAA 780 Query 778 CATGGAGTCGCAAAAGCAATTCTTAAATCTGTAATTGACTTTAAAAGAGACCCCTGGCCT 837 ||||||||||| |||||||||||| |||||| || ||||| | ||||||||||||||| Sbjct 781 CATGGAGTCGCGAAAGCAATTCTTCGATCTGTGATCGACTTCAGAAGAGACCCCTGGCCG 840 Query 838 AAAGTTTCTGATAATGCAAAAGATCTGATCAAAAAGATGCTTCATCCTGATCCAAGGCGT 897 |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 841 AAAGTTTCTGGTAATGCAAAAGATCTGATAAAAAAGATGCTTCATCCAGATCCAAGGCGT 900 Query 898 CGTCTAACTGCTCAACAAGTGCTTGATCATCCGTGGATACAGAATGGTAAGAATGCTTCC 957 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 CGTCTAACAGCTCAACAAGTGCTTGATCATCCGTGGATACAGAATGGTAAGAATGCTTCC 960 Query 958 AATGTATCATTGGGTGAAACCGTAAGAGCAAGGCTTAAGCAATTCTCTGTTATGAACAAG 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 AATGTATCATTGGGTGAAACCGTAAGAGCAAGGCTTAAGCAATTCTCTGTTATGAACAAG 1020 Query 1018 CTCAAGAAAAGGGCACTCAGGGTTATCGCTGAGCATCTATCGGTTGAAGAAACATCTTGC 1077 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1021 CTCAAGAAAAGGGCACTCAGGGTTATTGCTGAGCATCTATCGGTTGAAGAAACATCTTGC 1080 Query 1078 ATAAAAGAAAGATTCCAAGTAATGGATACAAGCAATAGAGGAAAGATTACTATCACCGAG 1137 |||||||||||||||||||||||||| |||||||||||||| |||||||| |||| |||| Sbjct 1081 ATAAAAGAAAGATTCCAAGTAATGGACACAAGCAATAGAGGGAAGATTACCATCAACGAG 1140 Query 1138 CTAGGAATCGGATTGCAGAAACTCGGGATTGTTGTTCCTCAAGATGACATTCAAATATTG 1197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 CTAGGAATCGGATTGCAGAAACTCGGGATTGTTGTTCCTCAAGATGACATTCAAATATTG 1200 Query 1198 ATGGACGCGGGAGATGTTGATAAAGATGGATATTTAGACGTCAATGAATTTGTAGCCATA 1257 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1201 ATGGACGCGGGAGATGTTGATAAAGATGGATACTTAGACGTCAATGAATTTGTAGCCATA 1260 Query 1258 TCGGTACACATCAGGAAGTTAGGCAACGACGAGCACTTAAAGAAAGCTTTTACGTTCTTT 1317 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 1261 TCGGTACACATCAGGAAGTTAGGCAACGACGAGCACTTAAAGGAAGCCTTTACGTTCTTC 1320 Query 1318 GACAAAAACAAGAGTGGTTATATCGAAATAGAGGAGTTAAGAGATGCTTTGGCAGATGAT 1377 ||||||||||||||||||||||| |||||| | || |||||||||||||||||||||||| Sbjct 1321 GACAAAAACAAGAGTGGTTATATAGAAATACAAGAATTAAGAGATGCTTTGGCAGATGAT 1380 Query 1378 GTTGACACTACTAGTGAAGAAGTTGTTGAAGCCATTATTCTTGATGTCGATACCAATAAG 1437 ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| Sbjct 1381 ATTGACACTACTAGTGAAGAAGTTGTCGAAGCCATTATCCTTGATGTCGACACCAATAAG 1440 Query 1438 GATGGGAAAATAAGTTACGACGAATTTGCAACGATGATGAAAACGGGAACGGATTGGAGA 1497 ||||||||||||||||| || || ||| |||||||||||||||||||||||||||||||| Sbjct 1441 GATGGGAAAATAAGTTATGAAGAGTTTACAACGATGATGAAAACGGGAACGGATTGGAGA 1500 Query 1498 AAAGCTTCGAGGCAGTACTCGAGGGACCTGTTTAAGTGTCTTAGTCTTAAGCTCATGCAA 1557 |||||||||||||||||||||||||||| ||||||| ||||||| |||||||| |||||| Sbjct 1501 AAAGCTTCGAGGCAGTACTCGAGGGACCGGTTTAAGAGTCTTAGCCTTAAGCTGATGCAA 1560 Query 1558 GATGGGTCCTTGCAGTCTAATGGAGATACAAAGTAG 1593 |||||||||||||||||||||||||||||||| ||| Sbjct 1561 GATGGGTCCTTGCAGTCTAATGGAGATACAAAATAG 1596 > Ahg938735 jgi|Araly1|938735|scaffold_502926.1 Length=1659 Score = 1256 bits (680), Expect = 0.0 Identities = 1237/1503 (82%), Gaps = 49/1503 (3%) Strand=Plus/Plus Query 109 CTTAAGCTTATCGTGTTGAAGGAACCAACGGGTCATGAGATCAAG-CAGAAATATAAATT 167 |||||||||||||| ||||| || ||||| |||| ||||||| || | ||||| | || Sbjct 156 CTTAAGCTTATCGTCTTGAATGATCCAACAGGTCGTGAGATCGAGTC-CAAATACACGTT 214 Query 168 AGGTCGTGAGTTAGGTCGAGGAGAGTTCGGTGTGACGTATCTGTGCACCGAGATCGAGAC 227 || | |||||||| || ||||| |||||||| |||||||| || || || | ||||| Sbjct 215 GGGGAGAGAGTTAGGCCGTGGAGAATTCGGTGTCACGTATCTTTGTACTGATAAGGAGAC 274 Query 228 CGGAGA-GATTTTCGCATGCAAATCAATCTTAAAGAAGAAGCTGAAAAC-GTC-GATTGA 284 || || | |||| || || ||||| || || ||||||||||||| || | | | |||| Sbjct 275 AGGCGACG-TTTTTGCTTGTAAATCGATTTTGAAGAAGAAGCTGAGGACAG-CTG-TTGA 331 Query 285 TATAGAGGACGTTAAGAGAGAAGTTGAGATCATGAGGCAAATGCCTGAACATCCTAATAT 344 ||| ||||| |||| |||||||||||||||||||||||| |||||||| ||||| ||| | Sbjct 332 TATTGAGGATGTTAGGAGAGAAGTTGAGATCATGAGGCATATGCCTGAGCATCCAAATGT 391 Query 345 TGTTACTTTGAAAGAGACTTATGAGGATGATAAAGCTGTGCATTTGGTTATGGAGCTTTG 404 |||||||||||| ||||||| ||||||||| | |||||||||||||||||||||||||| Sbjct 392 TGTTACTTTGAAGGAGACTTTTGAGGATGACCATGCTGTGCATTTGGTTATGGAGCTTTG 451 Query 405 TGAAGGCGGTGAGCTT-TTCGATAGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCTG 463 |||||| ||||| || || ||||||||||| ||||||||||||||||| |||||||||| Sbjct 452 TGAAGGTGGTGA-ATTGTTTGATAGGATTGTGGCTAGAGGGCATTATACCGAGAGAGCTG 510 Query 464 CTGCTTCGGTTATTAAAACGATCATCGAGGTTGTTCAGATGTGTCATAAGCATGGAGTAA 523 ||||| | || | ||| || ||||| || ||||||||| ||||||| |||||||| |||| Sbjct 511 CTGCTGCTGTCACTAAGACCATCATGGAAGTTGTTCAGGTGTGTCACAAGCATGGGGTAA 570 Query 524 TGCACAGAGATTTAAAACCTGAGAACTTCTTGTTTGCAAACAAGAAGGAAACTGCATCTT 583 ||||||| || | |||||||||||||||||||||| |||||||||||| |||||| || Sbjct 571 TGCACAGGGACCTGAAACCTGAGAACTTCTTGTTTGGAAACAAGAAGGAGACTGCACCTC 630 Query 584 TGAAGGCTATTGATTTTGGTCTCTCTGTTTTCTTTAAACCAGGCGAGAGATTTAACGAAA 643 | ||||| |||||||| |||||||||||||||||||||||||||||||| ||| |||||| Sbjct 631 TCAAGGCCATTGATTTCGGTCTCTCTGTTTTCTTTAAACCAGGCGAGAGGTTTGACGAAA 690 Query 644 TTGTTGGGAGTCCTTACTACATGGCTCCTGAGGTATTAAGGA-GGAGTTATGGACAAGAA 702 | ||||| ||||| |||||||||||||| ||||| ||| | ||| |||||| | |||| Sbjct 691 TCGTTGGTAGTCCGTACTACATGGCTCCCGAGGTGCTAAA-ACGGAATTATGGTCCAGAA 749 Query 703 ATTGACATTTGGAGCGCAGGAGTGATTCTTTACATATTGCTCTGTGGTGTTCCACCTTTT 762 ||||||||||||| || || || ||||| |||||| ||||||||||||| || ||||| Sbjct 750 GTTGACATTTGGAGTGCCGGTGTAATTCTCTACATACTGCTCTGTGGTGTCCCGCCTTTC 809 Query 763 TGGGCAGAAACCGAACATGGAGTCGCAAAAGCAATTC-TTAAATCTGTAATTGACTTTAA 821 ||||||||||| ||||| ||||| ||| ||||||| | || ||||||| | ||||| | Sbjct 810 TGGGCAGAAACTGAACAAGGAGTTGCACAAGCAAT-CATTCGATCTGTACTGGACTTCAG 868 Query 822 AAGAGACCCCTGGCCTAAAGTTTCTGATAATGCAAAAGATCTGATCAA-AAAGATGCTTC 880 ||| ||||| ||||| ||||||||||| || |||||||| || |||| ||| |||||| Sbjct 869 AAGGGACCCATGGCCCAAAGTTTCTGAAAACGCAAAAGACCTTATCAGGAAA-ATGCTTG 927 Query 881 ATCCTGATCCAAG-GCGTCGTCTAACTGCTCAACAAGTGCTTGATCATCCGTGGATACAG 939 ||||||| |||| ||||||||| || ||||||||||| || |||||||||||| ||||| Sbjct 928 ATCCTGA-CCAAAAGCGTCGTCTTACAGCTCAACAAGTCCTAGATCATCCGTGGTTACAG 986 Query 940 AATGGTAAGA-ATGCTTCCAATGTATCATTGGGTGAAACCGTAAGAGCAAGGCTT-AAGC 997 |||| |||| | ||| |||||||||||||||||||||| || || |||||| || |||| Sbjct 987 AATGCAAAGACA-GCTCCCAATGTATCATTGGGTGAAACAGTGAGGGCAAGG-TTGAAGC 1044 Query 998 AATTCT-CTGTTATGAACAAGCTCAAGAAAAGGGCACTCAGGGTTATCGCTGAGCATCTA 1056 | || | | || |||||||||||||||||| | |||||||||||||| ||||||||| || Sbjct 1045 AGTT-TACCGTCATGAACAAGCTCAAGAAACGAGCACTCAGGGTTATTGCTGAGCATTTA 1103 Query 1057 TCGGTTGAAGAAACATCTTGCATAAAAGAAAGATTCCAAGTAATGGATACAAGC-AATAG 1115 || | ||||||| | || | |||| |||| | |||||| ||||||| |||||| || || Sbjct 1104 TCAGATGAAGAAGCTTCAGGTATAAGAGAAGGGTTCCAAATAATGGACACAAGCCAA-AG 1162 Query 1116 AGGAAAGATTACTATC-ACCGAGCT-AGGAATCGGATTGCAGAAACTCGGG-ATTGTTGT 1172 ||| ||||||| |||| || ||||| | |||||| ||||||||||| || || | | Sbjct 1163 AGGGAAGATTAATATCGAC-GAGCTTAA-AATCGGGTTGCAGAAACTTGGTCAT-GCCAT 1219 Query 1173 TCCTCAAGATGA-CATTCAAATAT-TGATGGACGCGGGAGATGTTGATAAAGATGGATAT 1230 ||| |||||||| | | ||||| | ||||||| || |||||| | || | |||||||||| Sbjct 1220 TCCCCAAGATGATC-TACAAAT-TCTGATGGATGCTGGAGATATCGACAGAGATGGATAT 1277 Query 1231 TTAGAC-GTCAATGAATTTGTAGCCATATCGGTACACATCAGGAAGTTAGGCAACGACGA 1289 || ||| || | || ||| | ||||||||||||||| | ||||| | ||||| ||||| Sbjct 1278 TTGGACTGTGAC-GAGTTTATTGCCATATCGGTACACCTAAGGAAAATGGGCAATGACGA 1336 Query 1290 GCA-CTTAAAGAAAGCTTTTACGTTCTTTGA-CAAAAACAAGAGTGGTTATATCGAAATA 1347 ||| || || |||||| ||| |||||||||| ||||| ||| | || |||||||||||| Sbjct 1337 GCATCTCAA-GAAAGCATTTGCGTTCTTTGATCAAAA-CAATAACGGATATATCGAAATA 1394 Query 1348 GAGGAGTTAAGAGATGCTTTGGCAGATGATGTTGACACTACTAGTGAAGAAGTTGTTGAA 1407 ||||||||||| || || ||| | || || ||| || | || |||||||||||||| Sbjct 1395 GAGGAGTTAAGGGAAGCATTGTCTGACGAACTTGGTAC-A--AGCGAAGAAGTTGTTGAT 1451 Query 1408 GCCATTATTCTTGATGTCGATACCAATAAGGATGGGAA-AATAAGTTACGACGAATTTGC 1466 |||||||||| |||||| |||||| |||||||||| || |||||||||||| || |||| Sbjct 1452 GCCATTATTCGTGATGTTGATACCGATAAGGATGG-AAGAATAAGTTACGAAGAGTTTGT 1510 Query 1467 AACGATGATGAAAACGGGAACGGATTGGAGAAAAGCTTCGAGGCAGTACTCGAGGGACCT 1526 |||||||||||||| ||||| |||||||||||||| ||||| ||||||||||| || | Sbjct 1511 GACGATGATGAAAACAGGAACAGATTGGAGAAAAGCATCGAGACAGTACTCGAGAGAACG 1570 Query 1527 GTTTAAGTGTCTTAGTCTTAAGCTCATGCAAGATGGGTCCTTGCAG-TCTAATGGAGATA 1585 |||||| || | ||||| || || |||||||||| ||| |||||| | |||||| |||| Sbjct 1571 GTTTAACAGTATCAGTCTCAAACTGATGCAAGATGCGTCGTTGCAGGT-TAATGGTGATA 1629 Query 1586 CAA 1588 ||| Sbjct 1630 CAA 1632 > Ahg485540 jgi|Araly1|485540|fgenesh2_kg.5__1532__AT3G51850.1 Length=2080 Score = 457 bits (247), Expect = 2e-127 Identities = 582/741 (79%), Gaps = 34/741 (5%) Strand=Plus/Plus Query 239 TCGCATGCAAATCAATCTTAAAGAAGAAGCTGAAAACGTCGAT-T-GATATAGAGGACGT 296 |||| ||||| || |||| |||| |||||| | || | | | | ||||| ||||| || Sbjct 394 TCGCTTGCAAGTCGATCTCGAAGAGGAAGCTTAGGAC-T-GCTGTGGATATTGAGGATGT 451 Query 297 TAAGAGAGAAGTTGAGATCATGAGGCAAATGCCTGAACA-TCCTAATATTGTTACTTTGA 355 ||| |||||||| | ||| |||| ||| ||||| || | | | | |||||||||||||| Sbjct 452 TAAAAGAGAAGTGGCGATTATGAAGCATTTGCCT-AAGAGTTCGAGTATTGTTACTTTGA 510 Query 356 AAG-AGACTTATGAGGATGATAAAGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGCGGT 414 | | || ||| |||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 511 AGGAAG-CTTGTGAGGATGATAATGCTGTGCATTTGGTTATGGAGCTTTGTGAAGGTGGT 569 Query 415 GAGCTTTTCGATAGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCTGCTGCTTCGGTT 474 |||||||||||| |||||||||| |||||||||||||||||| | ||||||||| |||| Sbjct 570 GAGCTTTTCGATCGGATTGTTGCGAGAGGGCATTATACGGAGCGTGCTGCTGCTGGGGTT 629 Query 475 ATTAAAACGATCATCGAGGTTGTTCAGA-TGTGTCATAAGCATGGAGTAATGCACAGAGA 533 | ||| ||||| | |||||||| || | | || ||||||||||| || || || ||||| Sbjct 630 ACTAAGACGATTGTTGAGGTTGTGCA-ACTTTGCCATAAGCATGGTGTGATTCATAGAGA 688 Query 534 TTTAAAACCTGAGAACTTCTTGTTTGCAAACAAGAAGGA-AACT-GCATCTTTGAAGGCT 591 ||| || || ||||| || ||||| || ||||||||||| |||| || | ||||| ||| Sbjct 689 TTTGAAGCCGGAGAATTTTTTGTTCGCTAACAAGAAGGAGAACTCGC--CGTTGAAAGCT 746 Query 592 ATTGATTTTGG-TCTCTCTG-TTTTCTTTAAACCAGGCGAGAGATTTAAC-GAAATTGTT 648 ||||||||||| | | || | ||||||| || ||||| |||| | || | || |||||| Sbjct 747 ATTGATTTTGGAT-TGTC-GATTTTCTTCAAGCCAGGTGAGA-AGTTCTCCGAGATTGTT 803 Query 649 GGGAGTCCTTACTACATGGCTCCTGAGGTA-TTAAGGAGGAGTTATGGACAAGAAATTGA 707 |||||||| || |||||||| |||||||| ||||| ||| ||||||| ||||| || Sbjct 804 GGGAGTCCATATTACATGGCACCTGAGGTGCTTAAGC-GGAACTATGGACCCGAAATAGA 862 Query 708 CATTTGGAGCGCAGGAGTGATTCTTTACATAT-TGCTCTGTGGTGTTCCACCTTTTTGGG 766 |||||||| || |||||||||||||| || | || | ||||| ||||| || || |||| Sbjct 863 TATTTGGAGTGCTGGAGTGATTCTTTATAT-TCTGTTGTGTGGAGTTCCCCCATTCTGGG 921 Query 767 CAGAAACCGAACATGGAGTCGCAAAAGCAATTCTTAAATCTGTAATTGACTTTAAAAGAG 826 |||| | ||||| ||||| || | || ||||| |||||||| ||||| || | Sbjct 922 CAGAGTCAGAACAGGGAGTTGCTCAGGCTATTCTGCGCGGGGTAATTGATTTTAAGAGGG 981 Query 827 ACCCCTGGCCTAA-AGTTTCTGATAATGCAAAAGA-TCT-GATCAAA-AAGATGCTTC-A 881 | || ||||| || | ||||||| | || || || ||| | ||| | || ||| || | Sbjct 982 AACCGTGGCCAAACA-TTTCTGAGACCGCTAA-GAATCTAG-TCAGACAA-ATG-TTAGA 1036 Query 882 TCCTGATCCAAGGCGTCGTCTAACTGCTCAACAAGTGCTTGATCATCCGTGGATACAGAA 941 |||||||||| |||||| || ||||| ||||||||||||| || || ||||| ||||| Sbjct 1037 GCCTGATCCAAAGCGTCGGCTGACTGCAAAACAAGTGCTTGAGCACCCATGGATTCAGAA 1096 Query 942 TGGTAAGAATGCTTCCAATGT 962 | ||||| ||| ||||||| Sbjct 1097 CGCAAAGAAAGCTCCCAATGT 1117 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71190667905 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5