BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G42230.2
Length=2067
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483312 jgi|Araly1|483312|fgenesh2_kg.4__2372__AT2G42230.1 2704 0.0
Ahg486241 jgi|Araly1|486241|fgenesh2_kg.5__2233__AT3G57890.1 1519 0.0
> Ahg483312 jgi|Araly1|483312|fgenesh2_kg.4__2372__AT2G42230.1
Length=2135
Score = 2704 bits (1464), Expect = 0.0
Identities = 1645/1733 (95%), Gaps = 10/1733 (1%)
Strand=Plus/Plus
Query 2 TGTTCAAAGATCTGCAACTTCATTCATAACAGTTCT-T-TTTCTCTCGTTCTCTGG-TTT 58
||||||||||||||||||||| |||||||| ||||| | |||||| |||||||| |||
Sbjct 1 TGTTCAAAGATCTGCAACTTC-TTCATAACTGTTCTCTCATTCTCT--TTCTCTGGTTTT 57
Query 59 AAAGCATAATGACGGAAGAGCTCATCGACCAATCACCACCACCTGACCCAGACCCGATTC 118
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 58 GAGGCATAATGACGGAAGAACTCATCGACCAATCACCACCACCTGACCCAGACCCGATT- 116
Query 119 AAAA-TTCGAATTTAATAATCCACCCAAGACGTGTTCCTTTCGAGCACGGCCTTCTTCCG 177
|||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 117 AAAACTCCGAATTTAGTAATCCACCCGAGACGTGTTCCTTTCGAGCACGGCCTTCTTCCG 176
Query 178 ATCCAGAAGCTCGTTTTTACCGACCCGATTCAAACTCTAGCTCCGATCAAGCAAAAGTTA 237
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 177 ATCCAGAAGCTTGTTTTTACCGACCCGATTCAAACTCTAGCTCCGATCAAGCAAAAGCTA 236
Query 238 GCTTCTTTGGCGACGAATCATCGCGTCGGATCTGCTGCCATTTCCGATGCACTCTCGATC 297
||| ||| || |||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 237 GCTGCTTCCGCAACGAATAACCGCGTCGGATCTGCTGCCATTTCCGATGCACTCTCGATC 296
Query 298 TCCGATGACCATGCGCGCCTCGTTCTCGAAACTCTCTCTTCGGTGCTCCATTGCGAGACT 357
||| ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||
Sbjct 297 TCCAATGACCATGCGCGGCTCGTTCTTGAAACTCTCGGTTCGGTGCTCCATTGCGAGACT 356
Query 358 GACCCATTGGTTTTGGCCAAACCTGAGGAAGTTGATTCCGTGGGAGCTGATTTGAGGGAT 417
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 357 GACCCATTGGTTTTGGCCAAACCTGAGGAAGTTGATTCCGTCGGAGCTGATTTGAGGGAT 416
Query 418 CTGATATTGTTTCTCTACATTCAATCGTATAAGAAGTTATTGCCTAGGACGCATAAAGAC 477
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 417 CTGATATTGTTTCTCTACATTCAATCGTATAAGAAGTTGTTGCCTAGGACGCATAAGGAC 476
Query 478 TCTGCTTCTGTGGCTGATGTTTGGCCTTCGACTTCTGCTTTTGATGGATACTTGTCGGCA 537
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 477 TCTGCTTCTGTGGCTGATGTTTGGCCATCGACTTCTGCTTTTGATGGATACTTGTCAGCA 536
Query 538 TTATCTCCAATTCAGCTTGTTCGTAGCAACAGCCGTCGGTTTATGCCATCACCGACAGAT 597
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 537 TTATCTCCAATTCAGCTTGTTCGTAGCAACAGCCGTCGGTTTATGCCATCACCTACAGAT 596
Query 598 GAAGAAGCTCATCAATTATCGTATCTGCAAAAGCACATTGCAAATATTATTTCTCTCCTT 657
|||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct 597 GAAGAAGCTCATCAATTATCGTATCTGCAAAAGCACATAGCAAATATTGTTGCTCTCCTT 656
Query 658 GCAGAGCCTGTGGAGGGACAAGGAGATGATTCTTTGGTCCTGTCTATGGAGAGTTTGGAG 717
|||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 657 GCAGAGCCTGGGGAGGGAGAAGGAGATGAATCTTTGGTCCTGTCTATGGAGAGTTTGGAG 716
Query 718 CACATTGGGTTTCTTGTTCATTATGGTGATAAGGGATTTGATGTACCTTCTTTAAGCCAA 777
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 CATATTGGGTTTCTTGTTCATTATGGTGATAAGGGATTTGATGTACCTTCTTTAAGCCAA 776
Query 778 GCTACTCCtttttttGCGAATTCTGATCCTGATATGCCCGCTGTCCCCGTTCCTGCTTCC 837
|||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 777 GCTAGTCCTTTTTTTGCAAATTCTGATCCCAATATGCCCGCTGTCCCCGTTCCTGCTTCC 836
Query 838 CAAGTGAATGATTGGCTTCTCAAAGACATAGCTTCCGCCTTAGAAAGCATTTCTAACAGA 897
||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||
Sbjct 837 CAAGTGAATGATTGGCTTCTCAAAGACATAGCTTCTGCCATAGAAAGCATTTCTGACAGA 896
Query 898 ATCTCTGGGAAAGAAAATGGGGCATCTAATGCCTCTGATC-AGAATGCTGCAATGGCTGA 956
|| ||||| ||||||||||||||||||||||||||||||| || ||||||||||||| |
Sbjct 897 ATTTCTGGAAAAGAAAATGGGGCATCTAATGCCTCTGATCAAG-ATGCTGCAATGGCAAA 955
Query 957 TTCTAGTGTAGCTCTTAATAAAGTTTCATCTAACGACAGAGGTCCATGTATTATTGAGGG 1016
|||| || |||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 956 TTCTTTTGGAGCTCTTAATAAAGTTTCATCTAATGACAGAGGTCCGTGTATTATTGAGGG 1015
Query 1017 AGTCTCTAAGACCTCACTTTTCAAGCAGGCTTCTGATCTTAAGGGTAGATCAGTGAAGGT 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 AGTCTCTAAGACCTCACTTTTCAAGCAGGCTTCTGATCTTAAGGGTAGATCAGTGAAGGT 1075
Query 1077 TGCCAATTGCCATGATTCTGTTATTTATCTGTTAGCGCCATTGAGATATGCAACTGTGTA 1136
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1076 TGCCAATTGCCATGATTCTGTTATTTATCTGTTAGCACCATTGAGATATGCAACTGTGTA 1135
Query 1137 TGGGTGTTCTGATTCTACTATCGTTCTGGGAGCTGCTGGCAAGGCAGTAAAAGTTGAGCA 1196
||| |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||
Sbjct 1136 TGGATGTTCTGATTCTACTATCATTCTGGGAGCTACTGGCAAGGCAGTAAGAGTTGAGCA 1195
Query 1197 TTGTGAGAGAGTTCATGTGATTGTAGCTACCAAACGAATTTGCATCGCCAATTGCCGTGA 1256
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1196 TTGTGAGAGAGTTCATGTGATTGTAGCTACCAAACGAATCTGCATCGCCAATTGCCGTGA 1255
Query 1257 ATGTGTGTTCTTTTTGGGAGTCAATCAGCGACCTCTTATAGTTGGTGATAACCACAAACT 1316
||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1256 ATGTGTGTTATTTTTGGGAGTCAATCAGCGACCTCTTATTGTTGGTGACAACCACAAACT 1315
Query 1317 ACAGGTTGCTCCATATAATACATTTTACTCACACTTGGAGGAGCACATAACCGAGGTAGG 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 ACAGGTTGCTCCATATAATACATTTTACTCACACTTGGAGGAGCACATAACCGAGGTAGG 1375
Query 1377 AATTCAGCCAACTATCAACAAATGGAACGAATCCTTGGCGCTCGGAGCAATTGATCCGCA 1436
||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||||
Sbjct 1376 AATTCAGCCAACTATCAACAAATGGAATGAATCCTTGGCACTGGGAGCAGTTGATCCGCA 1435
Query 1437 TGACTCACTATCACATCCGACTGGTGCCTCTGATAAACAAGCTGAACCGGCTTCTTGTGT 1496
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1436 TGACTCACTATCACATCCGACTGGTGCCTCTGATAAACAATCTGAACCGGCTTCTTGTGT 1495
Query 1497 GGACCCTGACCAGTTCACTACCTTTTTGATCCCAAACTGGTTTGCGGGTGAGGCGATTGG 1556
|||||||||||||||||||||||||||||| ||||||||||||| ||| || ||| ||||
Sbjct 1496 GGACCCTGACCAGTTCACTACCTTTTTGATTCCAAACTGGTTTGAGGGCGAAGCGCTTGG 1555
Query 1557 TTCCACGAAAGACAATCCATTTCCATTGCCAGATGCATATAAGGCAGTGCAGCAGACAAA 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 TTCCACGAAAGACAATCCATTTCCATTGCCAGATGCATATAAGGCAGTGCAGCAGACAAA 1615
Query 1617 CCTTAAGAACTTAGAGGAAACAAGACAATCCTTGAGAGAAACACCTCTCGAAGAAAACCG 1676
||||||||||||||| |||||||||||||| || |||||| || |||| |||||||||||
Sbjct 1616 CCTTAAGAACTTAGAAGAAACAAGACAATCATTAAGAGAATCATCTCTTGAAGAAAACCG 1675
Query 1677 AAAACGAGAACTCACTACAGCGTTCCACATGTATTTCAAAGACTGGCTATACG 1729
|||||||||||| |||||||||||||||||| |||||||||||||||| ||||
Sbjct 1676 AAAACGAGAACTTACTACAGCGTTCCACATGCATTTCAAAGACTGGCTCTACG 1728
Score = 340 bits (184), Expect = 2e-92
Identities = 299/348 (86%), Gaps = 33/348 (9%)
Strand=Plus/Plus
Query 1725 ATACGCGACGGGAAATATTCGGCAACTTTACTGCCTACAAGGCGA-TTAAGACCAATGGC 1783
||| || || ||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 1808 ATA-GCAACTGGAAATATTCGGCAACTTTACTGCCTACAAGGCGACTAAAGACCAATGGC 1866
Query 1784 GATTGAAAATGTCAGAGTCACTGTAGAGTTCTCTTGATCCGTTCCTTCTCAGAGATTTGC 1843
||| ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1867 GATGGAAAATGTCAGAGTCACTGTAGAGTTCTCTTGATCCG-------T------TTTGC 1913
Query 1844 TAGCACGTTTGACATCAGAATTTAACTGCACAGCACGCTCTCTAACTCCTAAAGCTCTGt 1903
|||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||
Sbjct 1914 TAGCACGTTTGACATCAGAACTTAAATGCACAGCACTCTCTCTAACTCCTAAAGCTCTG- 1972
Query 1904 ttttttGTGTGTAGGTTTCTCTCTGCTTTTATCGTATTTATTAGTCTTAAATATCCACGT 1963
|| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||
Sbjct 1973 ----TT-TGTGTAGGTTTCTCTCTGCTTTGATCATATTTATTAGTTTTAAATATCCACGT 2027
Query 1964 TTTTGTCCTTGAAAAACATTAAGCCATCTTGTCTTGTT--GT-T-GATTTCTTTCAATTG 2019
||||||||||||||||||||| || | |||||||| || || | |||||||||||||||
Sbjct 2028 TTTTGTCCTTGAAAAACATTATGCAACCTTGTCTTTTTAAGTGTTGATTTCTTTCAATTG 2087
Query 2020 TTATAA-CA-AC-T----TTT-CTCAATACCATATATATAAATCTTTT 2059
|||||| || | | ||| ||||||||||| ||||||||||||||
Sbjct 2088 TTATAAGCAGATATCAACTTTGCTCAATACCATCTATATAAATCTTTT 2135
> Ahg486241 jgi|Araly1|486241|fgenesh2_kg.5__2233__AT3G57890.1
Length=2116
Score = 1519 bits (822), Expect = 0.0
Identities = 1447/1740 (83%), Gaps = 77/1740 (4%)
Strand=Plus/Plus
Query 74 AAGAGCTCATCGACCAATCACCACCACC-T--G-ACCCAGACCC-GATTC-AA----AAT 123
|||| |||||||||||||||||||| || | | |||| ||||| || | || |||
Sbjct 82 AAGACCTCATCGACCAATCACCACCGCCTTCAGCACCC-GACCCTGAACCAAACCCGAAT 140
Query 124 TCGAATTTAATAATCCACCCAAGACGTGTTC-CTTTCGAGCACGGCCTTCTTCCGATCCA 182
|||||| | ||||||| || || |||| || ||||||||||||| || || ||||||||
Sbjct 141 CCGAATTCAGTAATCCATCCGAGGCGTG-TCTCTTTCGAGCACGGACTCCTCCCGATCCA 199
Query 183 GAAGCTCGTTTTTACCGACCCGATTCAAA-CTCTAGCTCC-GATCAAGCAAAAGTTAGCT 240
|||||||||||||||||||||||| |||| || |||| || | ||||||| ||| ||||
Sbjct 200 GAAGCTCGTTTTTACCGACCCGATCCAAACCT-TAGCACCTG-TCAAGCAGAAGCTAGC- 256
Query 241 TCTTTG--GCGACGAATCATCGCGTCGGATCTGCTGCCATTTCCGATGCACTCTC-GATC 297
| || || | ||| | ||||| ||||| ||||| || |||| | ||| | ||||
Sbjct 257 -CGATGCCGCTTCTAATAACCGCGTTGGATCGGCTGCAATCGCCGACGTTCTC-CAGATC 314
Query 298 TCCGATGACCATGCGCGCCTCGTTCTCGAAACTCTCTCTTCGGTGCTCCATTGCGAGACT 357
|||| ||||||||||| ||||||||||| |||||| ||||||||| |||| |||| ||
Sbjct 315 TCCGGCGACCATGCGCGTCTCGTTCTCGAGACTCTCGGTTCGGTGCTTCATTCCGAGTCT 374
Query 358 GACCCAT-TGGTTTTGGCCAAACCTGAGGAAGTTGATTCCGTGGGAGCTGATTTGAGGGA 416
||||| | ||||| ||| |||||||||||||||||||| || |||||||||||| ||||
Sbjct 375 GACCC-TCTGGTTCGGGCGAAACCTGAGGAAGTTGATTCTGTCGGAGCTGATTTGCGGGA 433
Query 417 TCTGATATTGTTTCTCTACATTCAATCGTATAAGAAGTT-ATTGCCTAGGACGCATAAAG 475
||| || ||||| |||||||||||||||||||||||||| || |||||||||||||| |
Sbjct 434 TCTAATTTTGTTCCTCTACATTCAATCGTATAAGAAGTTGCTT-CCTAGGACGCATAAGG 492
Query 476 ACTCTGCTTCTGTGGCTGATGTTTGGCCTTCGACTTCTGCTTTTGATGGATACTTGTCGG 535
|||| || | ||||||||||| ||||| |||||||| |||||||||||||||||||| |
Sbjct 493 ACTCCGCAGCGGTGGCTGATGTATGGCCGTCGACTTCAGCTTTTGATGGATACTTGTCTG 552
Query 536 CATTATCTCCAATTCAGCTTGTTCGTAGCAACAGCCGTCGGTTTATGCCATCACCGA-CA 594
| ||||| ||||||||||||||||| |||||||||||||| |||||||||||| | | ||
Sbjct 553 CGTTATCGCCAATTCAGCTTGTTCGCAGCAACAGCCGTCGATTTATGCCATCA-CAAGCA 611
Query 595 GATGAAGAAGCTCATCAATTATCGTATCTGCAAAAGCACA-TT-GCAAATATTATTTCTC 652
||||| |||||||||||||| || ||| ||||||| ||| || ||||| || |||||||
Sbjct 612 GATGATGAAGCTCATCAATTGTCATATTTGCAAAA--ACATTTAGCAAACATCATTTCTC 669
Query 653 TCCTTGCAGAGCCTGTGGAGGGACAAGGAGATGATTCTTTGGTCCTGTCTATGGAGAG-T 711
||||||||||||||||||||||| |||||||||| || ||||| || || |||||| | |
Sbjct 670 TCCTTGCAGAGCCTGTGGAGGGAGAAGGAGATGAATCATTGGTTCTCTCCATGGAG-GCT 728
Query 712 TTGGAGCACATTGGGTTT-CTTGTTCA-TTATGGTGATAAGGGATTTGATGTACCTTCTT 769
|| |||||| | |||||| |||||||| || |||||||||||||| ||||||| || | |
Sbjct 729 TTCGAGCACCT-GGGTTTTCTTGTTCAGTT-TGGTGATAAGGGATCTGATGTATCTCCAT 786
Query 770 TAAGCCAAGCTACTCCtttttttGCGAATTCTGATCCTGATATGCCCGCTGTCCCCGTTC 829
| |||||||||||||| |||||||| ||||||||||| |||||||||||||| || || |
Sbjct 787 TGAGCCAAGCTACTCCATTTTTTGCAAATTCTGATCCGGATATGCCCGCTGTTCCAGTCC 846
Query 830 CTGCTTCCCAAGTGAATGATTGGCTTCT-CAAAGACATAGCTTCCGCCTTAGAAAGCATT 888
| |||||||||||| |||| |||||| | |||| ||||||||||||| ||||||||||||
Sbjct 847 CCGCTTCCCAAGTGCATGACTGGCTTATGCAAA-ACATAGCTTCCGCTTTAGAAAGCATT 905
Query 889 TCTAACAGAATCTCTGGGAAAGAAAATGGGGCATCTAATGCCTCTGATCA-GAATGCTGC 947
|| | ||||| ||||| ||||| || || | ||||| | ||||| || || |||
Sbjct 906 ACTGAGAGAATTTCTGGAAAAGAGAACGGACCTTCTAA--C----GATCAAGA-TGATGC 958
Query 948 AATGGCTGAT-TCTAGTG-TAGCTCTTAATAAAGTTTCATCTAACGAC-AGAGGTCCATG 1004
||| | ||| | | ||| | |||| || || ||| || ||| || |||||||| ||
Sbjct 959 GATGTCAGATGTTT-GTGCT-GCTCCGAACAAGGTTGCACCTAGT-ACTAGAGGTCCGTG 1015
Query 1005 TATTATT-GAGGGAGTCTCTAAGACCTCACTT-TTCAAGCAGGCTTCTGATCTTAAGGG- 1061
| ||| | ||||||||||| ||||| |||||| || |||||||| || ||||| |||||
Sbjct 1016 T-TTAATCGAGGGAGTCTCCAAGACTTCACTTGTT-AAGCAGGCCTCCGATCT-AAGGGG 1072
Query 1062 TAGATCAGTGAAGGTTGCCAATTGCCATGATTCTGTTATTTATCTGTTAGCGCCATTGAG 1121
|||||| |||||||||| |||||||||||||||||| |||||||| ||||| |||||| |
Sbjct 1073 TAGATCTGTGAAGGTTGTCAATTGCCATGATTCTGTAATTTATCTTTTAGCACCATTGCG 1132
Query 1122 ATATGCAACTGTGT-ATGGGTGTTCTGATTCTACTATCGTTCTGGGAGCTGCTGGCAAGG 1180
|||||||||||| | |||| ||||||||| ||||||| ||| ||||||||| ||||||||
Sbjct 1133 ATATGCAACTGT-TCATGGATGTTCTGATACTACTATAGTTTTGGGAGCTGTTGGCAAGG 1191
Query 1181 CAGTAAAAGTTGAGCATTGTGAGAGAGTTCATGTGATTGTAGCTACCAAACGAATTTGCA 1240
|| ||||||||||||| ||||||||||||||||||||||||||| |||||||| | ||||
Sbjct 1192 CATTAAAAGTTGAGCACTGTGAGAGAGTTCATGTGATTGTAGCTGCCAAACGAGTGTGCA 1251
Query 1241 TCGCCAATTGCCGTGAATGTGTGTTCTTTTTGGGAGTCAATCAGCGACCTCTTATAGTTG 1300
| |||||||| ||||||||||| ||||| |||||||||||||||||||| ||||| ||||
Sbjct 1252 TTGCCAATTGTCGTGAATGTGTATTCTTCTTGGGAGTCAATCAGCGACCACTTATTGTTG 1311
Query 1301 GTGATAACCACAAACTACAGGTTGCTCCATATAATACATTTTACTCACACTTGGAGGAGC 1360
|||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||
Sbjct 1312 GTGATAACCACAAACTGCAGGTCGCTCCATATAATACATTTTACTCTCATTTGGAAGAGC 1371
Query 1361 ACATAACCGAGGTAGGAATTCAGCCAACTATCAACAAATGGAACGAATCC-TTGGCGCTC 1419
|||| | ||||| || || ||||||| |||||||||||| || || || ||||| ||
Sbjct 1372 ACATGAGTGAGGTTGGGGTTGAGCCAACAATCAACAAATGGGACAAA-CCATTGGCTCTG 1430
Query 1420 GGAGCAATTGATCCGCATGACTCACTATCACATCC-GACTGGTGCCT-CTGATAAACAAG 1477
|||||| | ||||| ||||||||||| ||||| || | | |||| | ||||| |||||
Sbjct 1431 GGAGCAGTAGATCCACATGACTCACTGTCACACCCTGCC-GGTGT-TGCTGATGCACAAG 1488
Query 1478 CTGAACCGGCTTCTTGTGTGGACCCTGACCAGTTCACTACCTTTTTGATCCCAAACTGGT 1537
||||| | ||| ||| ||| ||||||||||||||| || ||||||||||||||||||||
Sbjct 1489 CTGAATCAGCTGCTTCTGTAGACCCTGACCAGTTCGTTAACTTTTTGATCCCAAACTGGT 1548
Query 1538 TT-GCGGGTGAGGCGATTGGTTCCACGAAAGACAATCCATTTCCATTGCCAGATGCATAT 1596
|| |||| |||| || |||||| || ||||||||||||||||||||||||||| | |||
Sbjct 1549 TTAGCGGC-GAGGAGACTGGTTCGACAAAAGACAATCCATTTCCATTGCCAGATACTTAT 1607
Query 1597 AAGGCAG-TGCAGCAGACAAACCTTAAGAACTTAGAGGAAACAAGACAATCCTTGAGAGA 1655
| ||||| | ||||||| ||||||||||||||| || |||||||||| ||| || | |||
Sbjct 1608 ATGGCAGCT-CAGCAGAGAAACCTTAAGAACTTTGAAGAAACAAGACGATCGTTAAAAGA 1666
Query 1656 AACACCTCTCGAAGAAAACCGAAAACGAGAACTCA-CTACAGCGTTCCACATGTATTTCA 1714
| | ||| | ||||||||||| |||||||| || | | | || |||| | |||||||
Sbjct 1667 AGCGCCTTTGGAAGAAAACCGGAAACGAGAGCT-ATCAAGTGCACTCCATGTTTATTTCA 1725
Query 1715 AAGACTGGCTATACGCGA-CGGGAAATATTCGGCAACTTTACTGCCTACAAGGCGATTAA 1773
|||||||||| ||||| | | |||||||| ||||||| |||||||||||||| || |||
Sbjct 1726 AAGACTGGCTTTACGC-ATCTGGAAATATAAGGCAACTCTACTGCCTACAAGGTGACTAA 1784
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77742190045
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5