BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G42600.2
Length=3160
Score E
Sequences producing significant alignments: (Bits) Value
Ahg935146 jgi|Araly1|935146|scaffold_403134.1 4811 0.0
Ahg478917 jgi|Araly1|478917|fgenesh2_kg.3__1618__AT3G14940.1 1622 0.0
Ahg474459 jgi|Araly1|474459|fgenesh2_kg.1__4413__AT1G53310.2 1604 0.0
> Ahg935146 jgi|Araly1|935146|scaffold_403134.1
Length=2939
Score = 4811 bits (2605), Expect = 0.0
Identities = 2829/2940 (96%), Gaps = 4/2940 (0%)
Strand=Plus/Plus
Query 69 AGAGAGAGGAAAAAGCATCAACCAAACCATGGCTGCGAGAAATTTGGAGAAGATGGCTTC 128
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1 AGAGAGAAGAAAAAGCATCAACC-AACCATGGCTGCGAGAAATTTGGAGAAGATGGCTTC 59
Query 129 TATTGATGCTCAGCTCAGGCTTCTTGCTCCTGGCAAGGTTTCTGAAGACGACAAGCTTAT 188
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 AATTGATGCTCAGCTCAGGCTTCTTGCTCCTGGCAAGGTTTCTGAAGACGACAAGCTTAT 119
Query 189 CGAGTACGATGCTCTGTTACTGGATCGATTTCTCGATATTCTTCAGGATTTGCATGGCGA 248
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CGAGTACGATGCTCTCTTGTTGGATCGATTTCTCGATATTCTTCAGGATTTGCATGGCGA 179
Query 249 GGATGTCAGAGAATTCGTTCAAGAATGCTACGAAGTTGCAGCTGATTACGATGGAAACCG 308
||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct 180 GGATGTCAGAGAATTCGTTCAAGAATGCTACGAGGTTGCGGCTGATTACGATGGTAACCG 239
Query 309 CAACACTGAGAAGCTTGAGGAGCTTGGAAATATGCTGACGAGTTTGGATCCAGGGGATTC 368
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 CAACACTGATAAGCTAGAGGAGCTTGGAAATATGCTGACGAGTTTGGATCCAGGGGATTC 299
Query 369 AATTGTTGTCACTAAATCATTCTCCAACATGCTTAGCTTGGCTAATCTGGCTGAGGAAGT 428
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 300 GATTGTTGTCACAAAATCATTTTCCAACATGCTTAGCTTGGCTAATCTGGCTGAGGAAGT 359
Query 429 CCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAAGAAAGGTGATTTCGCTGATGAGGC 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 CCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAAGAAAGGTGATTTCGCTGATGAGGC 419
Query 489 CTCTGCAACAACGGAATCTGACATTGAAGAGACTCTCAAGAGGCTTTTGCAGCTTAACAA 548
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CTCTGCAACGACGGAATCTGACATTGAAGAGACTCTCAAGAGGCTTTTGCAGCTTAACAA 479
Query 549 GACTCCTGAAGAGGTCTTTGATGCTCTTAAGAATCAGACTGTTGACTTGGTTTTAACTGC 608
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 480 GACTCCTGAAGAGGTCTTTGATGCTCTCAAGAATCAGACTGTTGACTTGGTTTTAACTGC 539
Query 609 TCATCCCACTCAATCTGTTCGTCGGTCTTTGCTCCAAAAGTTTGGAAGGATTCGTGATTG 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 540 TCATCCCACTCAATCTGTTCGTCGGTCTTTGCTCCAAAAGTTTGGAAGGATTCGTGACTG 599
Query 669 TTTGACGCAGTTATATGCAAAGGACATTACTCCTGATGACAAACAAGAACTCGATGAAGC 728
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 600 TTTGACGCAGTTATATGCAAAGGACATTACTCCTGATGATAAACAAGAACTTGATGAAGC 659
Query 729 TCTGCAACGAGAGATTCAAGCTGCTTTTCGCACAGATGAAATCCGAAGAACTCCTCCTAC 788
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||
Sbjct 660 TCTGCAACGAGAGATTCAAGCTGCTTTTCGCACTGATGAAATCAGAAGAACTCCTCCAAC 719
Query 789 ACCGCAAGATGAAATGAGAGCAGGGATGAGCTACTTCCATGAGACAATCTGGAAAGGAGT 848
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 ACCGCAGGATGAAATGAGAGCAGGGATGAGCTACTTCCATGAGACAATCTGGAAAGGAGT 779
Query 849 TCCAAAGTTCTTAAGACGTGTTGACACAGCTTTAAAGAACATTGGAATCAACGAGCGTGT 908
||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 780 TCCTAAGTTCTTGAGACGTGTTGACACGGCTTTAAAGAACATTGGAATCAACGAGCGTGT 839
Query 909 TCCTTACAATGCGCCTCTCATTCAGTTCTCTTCTTGGATGGGCGGAGACCGTGATGGAAA 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 TCCTTACAATGCGCCTCTCATTCAGTTCTCTTCTTGGATGGGCGGAGACCGTGATGGAAA 899
Query 969 CCCGCGAGTAACTCCTGAAGTTACAAGAGATGTATGCTTATTAGCTAGAATGATGGCTGC 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 CCCGCGAGTAACTCCTGAAGTTACAAGAGATGTATGCTTATTAGCTAGAATGATGGCTGC 959
Query 1029 TAATCTCTACTTCTCCCAGATAGAAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAA 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 TAATCTCTACTTCTCCCAGATAGAAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAA 1019
Query 1089 TGAGGAACTTCGGGTTCGTGCAGAACGTCAAAGATGTGCGAAGAGGGATGCAAAACACTA 1148
|||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 1020 TGAGGAACTTCGTGTCCGTGCAGAACGTCAACGATGTGCGAAAAGGGATGCAAAACACTA 1079
Query 1149 TATAGAATTCTGGAAACAAATCCCTGCGAATGAGCCATACCGAGCTATTCTTGGAGATGT 1208
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 TATAGAATTTTGGAAACAAATCCCTGCGAATGAGCCATACCGAGCTATTCTTGGAGATGT 1139
Query 1209 GAGGGACAAGCTGTACAACACACGTGAGCGTGCACGTCAGTTATTGTCAAGCGGAGTTTC 1268
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1140 AAGGGACAAGCTGTACAACACACGTGAACGTGCACGTCAGTTATTGTCAAGCGGAGTTTC 1199
Query 1269 GGACGTTCCCGAAGACGCGGTTTTCACAAGTGTGGATCAGTTTTTGGAGCCACTTGAGCT 1328
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 AGACGTTCCCGAAGAAGCTGTTTTCACAAGTGTGGATCAGTTTTTGGAGCCACTTGAGCT 1259
Query 1329 TTGTTACAGGTCGCTCTGTGATTGCGGTGACAGACCTATTGCTGATGGAAGCCTGCTTGA 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1260 TTGTTACAGGTCGCTCTGTGATTGCGGTGACAGACCTATTGCTGATGGAAGCCTGCTCGA 1319
Query 1389 TTTCTTACGCCAAGTGTCAACATTTGGCCTTGCTCTTGTGAAACTTGATATCCGTCAAGA 1448
||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1320 TTTCTTACGCCAAGTGTCAACATTTGGGCTTGCGCTTGTTAAACTTGATATCCGTCAAGA 1379
Query 1449 ATCTGAAAGACACTCTGATGTCTTGGATGCCATCACGACGCACTTAGGTATTGGTTCTTA 1508
|||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1380 ATCTGACAGACACACCGATGTCTTGGATGCTATCACGACGCACTTAGGTATTGGTTCTTA 1439
Query 1509 CAAAGAATGGTCGGAGGATAAAAGACAGGAATGGCTGTTATCTGAGCTAAGCGGGAAACG 1568
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1440 CAAAGAGTGGTCGGAGGATAAAAGACAAGAATGGCTGTTATCTGAGCTAAGCGGGAAACG 1499
Query 1569 CCCTCTCTTTGGACCGGATCTTCCCAAAACCGAAGAGGTTGCAGATGTGTTGGACACTTT 1628
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1500 CCCTCTCTTTGGACCGGATCTTCCCAAAACTGAAGAGGTTGCAGATGTGTTGGACACTTT 1559
Query 1629 CAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATTATCTCAATGGCCAC 1688
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1560 CAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATAATCTCAATGGCCAC 1619
Query 1689 TGCTCCATCAGACGTGCTCGCTGTTGAGCTTTTGCAACGCGAATGCGGGATCACTGATCC 1748
|||||||||||| ||||||||||||||||| |||||||||||||| || |||||| ||||
Sbjct 1620 TGCTCCATCAGATGTGCTCGCTGTTGAGCTCTTGCAACGCGAATGTGGCATCACTAATCC 1679
Query 1749 TCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGATTTAGAATCCGCACCTGCTGCAGT 1808
||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct 1680 TCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGATTTAGAATCTGCGCCTGCTTCAGT 1739
Query 1809 TGCCCGTCTCTTCTCCATAGAATGGTACAGAAACAGGATCAATGGAAAGCAAGAAGTCAT 1868
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1740 CGCCCGTCTCTTCTCCATAGAATGGTACAGAAACCGGATCAATGGAAAGCAAGAAGTCAT 1799
Query 1869 GATCGGGTACTCTGACTCGGGCAAAGATGCTGGTCGTTTATCAGCGGCTTGGCAGTTATA 1928
||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1800 GATCGGGTATTCTGACTCGGGCAAAGATGCTGGTCGTTTATCTGCGGCTTGGCAGCTATA 1859
Query 1929 CAAGACTCAAGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTCAAGCTGACAATGTT 1988
||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1860 CAAGACTCAGGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTTAAGCTCACTATGTT 1919
Query 1989 CCACGGAAGAGGTGGGACCGTTGGACGAGGAGGTGGACCTACCCATCTTGCTATTTTGTC 2048
|||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||
Sbjct 1920 CCACGGAAGAGGTGGGACTGTAGGACGAGGAGGTGGACCAACCCATCTTGCTATTTTGTC 1979
Query 2049 TCAGCCTCCGGATACCATTCATGGGCAATTGAGGGTAACGGTTCAAGGTGAAGTTATTGA 2108
||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1980 TCAGCCTCCAGATACCATTCATGGGCAATTAAGGGTAACCGTTCAAGGTGAAGTTATTGA 2039
Query 2109 ACAGTCTTTCGGAGAAGAGCACTTATGCTTTAGGACTCTTCAGCGTTTCACAGCTGCAAC 2168
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2040 ACAGTCTTTCGGAGAAGAGCACTTATGCTTTAGGACTCTTCAGCGTTTCACGGCTGCAAC 2099
Query 2169 ACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCTGAGTGGCGTGTCCTCATGGA 2228
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 2100 ACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCCGAGTGGCGCGTCCTCATGGA 2159
Query 2229 TGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTTGTCTTCAAGGAGCCCCGTTT 2288
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2160 TGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTCGTCTTCAAGGAGCCCCGTTT 2219
Query 2289 TGTTGAGTACTTCCGTCTGGCAACACCAGAGCTCGAGTATGGAAGGATGAACATAGGAAG 2348
||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 2220 TGTTGAGTACTTCCGTCTGGCGACACCGGAGCTTGAGTATGGAAGGATGAACATAGGAAG 2279
Query 2349 CCGACCATCAAAACGTAAACCAAGCGGAGGAATCGAGTCGCTGCGTGCAATCCCGTGGAT 2408
||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 2280 CCGACCATCGAAACGTAAACCGAGCGGAGGAATCGAGTCGCTGCGTGCGATCCCGTGGAT 2339
Query 2409 CTTTGCGTGGACTCAGACGAGGTTTCACTTACCCGTGTGGCTTGGCTTTGGAGGAGCATT 2468
|||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 2340 CTTTGCATGGACTCAGACGAGGTTTCACTTACCCGTGTGGCTAGGCTTTGGAGGGGCATT 2399
Query 2469 CAAACGCGTGATACAGAAGGACAGTAAGAATCTCAACATGCTCAAAGAGATGTACAACCA 2528
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2400 CAAACGCGTGATCCAGAAGGACAATAAGAATCTCAACATGCTCAAAGAGATGTACAACCA 2459
Query 2529 ATGGCCATTCTTCCGTGTCACAATTGATCTAGTCGAAATGGTTTTCGCCAAAGGAGATCC 2588
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2460 ATGGCCTTTCTTCCGTGTCACAATTGATCTGGTCGAAATGGTTTTCGCCAAAGGAGATCC 2519
Query 2589 CGGAATTGCGGCTCTGTATGACCGCCTCCTCGTCTCTGAAGAACTTCAACCATTCGGTGA 2648
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2520 AGGAATCGCGGCTCTGTACGACCGCCTCCTCGTCTCTGAAGAACTTCAACCATTCGGTGA 2579
Query 2649 ACAACTTCGAGTTAACTACCAAGAGACCAGACGCCTCCTCCTCCAGGTTGCAGGTCACAA 2708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2580 ACAACTTCGAGTTAACTACCAAGAGACCAGACGCCTCCTCCTCCAGGTTGCAGGTCACAA 2639
Query 2709 AGACATTTTAGAAGGTGACCCTTACTTGAGGCAAAGGCTGCAGCTTCGTGACCCATACAT 2768
||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 2640 AGACATTCTAGAAGGTGACCCTTACTTAAGGCAAAGGCTGCAGCTACGTGACCCATACAT 2699
Query 2769 CACGACATTGAACGTGTGTCAAGCCTATACACTCAAGCAGATCCGTGACCCAAGCTTCCA 2828
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 2700 CACGACATTGAACGTGTGCCAAGCCTACACACTCAAGCAGATCCGTGACCCAAGCTTCCA 2759
Query 2829 CGTCAAAGTCCGGCCACATCTCTCTAAGGACTACATGGAGTCTAGTCCAGCGGCTGAGCT 2888
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2760 CGTCAAAGTCCGGCCACATCTATCTAAGGACTACATGGAGTCTAGTCCAGCAGCTGAGCT 2819
Query 2889 CGTGAAA-CTGAATCCAAAGAGTGAATACGCACCGGGACTTGAAGATACGGTTATCCTCA 2947
|| ||| || ||||||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 2820 TGT-AAAGCTCAATCCAAAGAGCGAATACGCACCGGGACTTGAAGATACCGTCATCCTCA 2878
Query 2948 CCATGAAGGGTATCGCTGCTGGTATGCAAAACACCGGTTAAGGCAGTTTAAAACGTTCTT 3007
| ||||||||||| ||||| |||||||||||||||||||||| ||||||||| ||| |||
Sbjct 2879 CTATGAAGGGTATTGCTGCCGGTATGCAAAACACCGGTTAAGCCAGTTTAAACCGT-CTT 2937
> Ahg478917 jgi|Araly1|478917|fgenesh2_kg.3__1618__AT3G14940.1
Length=3200
Score = 1622 bits (878), Expect = 0.0
Identities = 2293/2961 (77%), Gaps = 157/2961 (5%)
Strand=Plus/Plus
Query 115 GAGAAGATGGCTTCTATTGATGCTCAGC-TCAGGCTTCTTGCTCCTGGC-AAGGTTTCTG 172
||||||||||| || ||||||||||||| || ||| || | |||| || || || ||
Sbjct 63 GAGAAGATGGCATCAATTGATGCTCAGCTTC-GGCAACTCGTTCCT-GCTAAAGTCAGTG 120
Query 173 AAGACGACAAGCTTATCGAGTACGATGCTCTGT-TACTGGATCGATTTCTCGATATTCTT 231
||||||| |||||| | |||||||||||||| | | || ||||| |||||||| |||||
Sbjct 121 AAGACGATAAGCTTGTTGAGTACGATGCTCT-TCTCCTCGATCGCTTTCTCGACATTCTC 179
Query 232 CAGGATTTGCATGGCGAGGATGTCAGAGAATTCGTTCAAGAATGC--TACGAAG-TTGCA 288
|||||||| || ||||||||| || | ||| |||||||| | || |||| || || |
Sbjct 180 CAGGATTTACACGGCGAGGATCTCCGTGAAACCGTTCAAG-A-GCTATACG-AGCTTTCT 236
Query 289 GCTGATTACGATGGAAACCG-CAACACTGAGAAGCTTGAGGAGCTTGGAAATATGCTGAC 347
||||| || || || || || | | ||||||||||||||||||| || | | | || ||
Sbjct 237 GCTGAGTATGAAGGGAAGCGTGAGC-CTGAGAAGCTTGAGGAGCTAGGGAGTGTCCTAAC 295
Query 348 GAGTTTGGATCCAGGGGATTCAATTGTTGTCACTAAATCATTCTC-CAACATGCTTAGCT 406
|||||||||||| || || || |||||| || | || | ||||| | ||||||||| ||
Sbjct 296 GAGTTTGGATCCTGGTGACTCCATTGTTATCTCCAAGGCTTTCTCTC-ACATGCTTAACT 354
Query 407 TGGCTAATCTGGCTGAGGAAGTCCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAAGA 466
| || ||| |||| |||||||| ||||||||| |||| || ||||| ||||| | ||||
Sbjct 355 TAGCCAATTTGGCCGAGGAAGTGCAGATTGCTCACCGCCGCAGGATCAAGAAGTTGAAGA 414
Query 467 AAGGTGATTTCGCTGATGAG-GCCTCTGCAACAACGGAATCTGACATTGAAGAGACTCTC 525
| |||||||||| ||||||| | |||||||| || ||||| || || ||||||||| |
Sbjct 415 AGGGTGATTTCGTTGATGAGAG-TTCTGCAACTACTGAATCCGATATCGAAGAGACTTTT 473
Query 526 AAGAGGCT--TTT-GCAGCTTAACAAGACTCCTGAAGAGGTCTTTGATGCTCTT-AAGAA 581
||||| || ||| | | ||| ||| ||||||||||| |||||||||| ||| |||||
Sbjct 474 AAGAGACTCGTTTCGGATCTTGGTAAGTCTCCTGAAGAGATCTTTGATGC-CTTGAAGAA 532
Query 582 TCAGACTGTTGACTTGGTTTTAACTGCTCATCCCACTCAATCTGTTCGTCGGTCTTTGCT 641
||||||||| || |||||||| ||||||||||| ||||| ||||| ||| | || |||||
Sbjct 533 TCAGACTGTGGATTTGGTTTTGACTGCTCATCCTACTCAGTCTGTGCGTAGATCATTGCT 592
Query 642 CCAAAAGTTTGGAAGGATTCGTGATTGT-TTGACGCAGTTATATGCAAAGGACATTACTC 700
|| ||| ||| ||||| | || ||| ||| | || | |||||||||||||||||||
Sbjct 593 TCAGAAGCATGGGAGGATAAGGGACTGTCTTG-CTCAACTGTATGCAAAGGACATTACTC 651
Query 701 CTGATGACAAACAAGAACTCGATGAAG-CTCTGCAACGAGAGATTCAAGCTGCTTTTCGC 759
|||||||||| || || |||||||| | |||||||| |||||||||||||||| || ||
Sbjct 652 CTGATGACAAGCAGGAGCTCGATGA-GTCTCTGCAAAGAGAGATTCAAGCTGCATTCCGA 710
Query 760 ACAGATGAAATCCGAAGAACTCCTCCTACACCGCAAGATGAAATGAGAGCAGGGATGAGC 819
|||||||| || ||||||| ||||| || |||||||||||||||||||| || |||||
Sbjct 711 ACAGATGAGATTAGAAGAACACCTCCAACCCCGCAAGATGAAATGAGAGCTGGAATGAGT 770
Query 820 TACTTCCATGAGACAATCTGGAAAGGAGTTCCAAAGTTCTTAAGACGTGTTGACACAGCT 879
|| ||||| ||||||||||||||||| || || |||||||| | ||||| |||||||||
Sbjct 771 TATTTCCACGAGACAATCTGGAAAGGTGTCCCCAAGTTCTTGCGCCGTGTGGACACAGCT 830
Query 880 TT-AAAGAACATTGGAATCAACGAGCGTGTTCCTTACAATGCGCC-TCTCATTCAGTTCT 937
| ||| ||||| || || | || ||||||||||||||||| || | | ||||| ||||
Sbjct 831 CTGAAA-AACATCGGGATTGATGAACGTGTTCCTTACAATGCCCCAT-TGATTCAATTCT 888
Query 938 CTTCTTGGATGGGCGGAGACCGTGATGGAAACCCGCGAGTAACTCCTGAAGTTACAAGAG 997
|||| ||||||||||| || |||||||| || ||| | || || ||||| || || ||||
Sbjct 889 CTTCATGGATGGGCGGTGATCGTGATGGTAATCCGAGGGTCACACCTGAGGTCACTAGAG 948
Query 998 ATGTATGCTTATTAGCTAGAATGATGGCTGCTAATCTCTACT-TCTCCCAGATAGAAGA- 1055
|||| ||||| | ||||||||||||||||| |||||||||| | || | || || ||
Sbjct 949 ATGTGTGCTTGCTGGCTAGAATGATGGCTGCCAATCTCTACTATAACCAA-ATCGA-GAA 1006
Query 1056 TCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGAGGAACTTCGG-GTTCGTGC--A-G 1111
||| ||||||||| |||||||||||||||||| ||| || ||| | || || || | |
Sbjct 1007 TCTGATGTTTGAGTTGTCTATGTGGCGTTGCACTGATGAG-TTCCGTGTCCGGGCGGATG 1065
Query 1112 AACGTCAA-AG-ATGTGCGAAG-AGGGATGC---AAAACACTATATAGAATTCTGGAA-A 1164
||| || | || | | | ||| | ||||| |||||| || |||||||| ||||| |
Sbjct 1066 AAC-TCCACAGGAACT-C-AAGGAAAGATGCTGCAAAACATTACATAGAATTTTGGAAGA 1122
Query 1165 CAAATCCCTGCGAA-TGAGCCATACCGAGCT-ATTCTTGGAGATGTGAGGGACAAGCTGT 1222
||| ||| | | || |||||||||||| | | |||||||| ||||||||||| |||||||
Sbjct 1123 CAATTCC-TCC-AACTGAGCCATACCGTG-TGATTCTTGGTGATGTGAGGGATAAGCTGT 1179
Query 1223 A-CAACACACGTGAGCGTGCACGTCAGTTATTG--TCAAGCGGAGTTTCGGACGTTCCCG 1279
| || ||||||||||||| | ||||| || || | || |||| | |||||| | ||||
Sbjct 1180 ATCA-CACACGTGAGCGTTCTCGTCAATTGCTGAGT-AA-CGGAATCTCGGACATCCCCG 1236
Query 1280 AAGACGCGGTTTTCAC-AAGTGTGGATCAGTTTTTGGAGCCACTTGAGCTTTGTTACAGG 1338
|||| || |||||| || |||||| ||||| |||||||| |||||||| |||||| |
Sbjct 1237 AAGAAGCAACTTTCACCAA-TGTGGAACAGTTCTTGGAGCCTCTTGAGCTCTGTTACCGA 1295
Query 1339 TCGCTCTGTG-ATTGCGGTGACAGACCTATTGCTGATGGAAGCCTGCTTGATTTCTT-AC 1396
||||| ||| || | |||||| | || || |||||||||||||| ||||||||||| |
Sbjct 1296 TCGCTATGTTCAT-GTGGTGACCGCCCGATAGCTGATGGAAGCCTTCTTGATTTCTTGAG 1354
Query 1397 GCCAAGTGTCAACATTTGGCCT-TGCTCTTGTGAAACTTGATATCCGTCAAGAATCTGAA 1455
|| |||| || || ||||| || | | ||||||| |||||| ||| | ||||| ||||||
Sbjct 1355 GC-AAGTCTCTACCTTTGGACTCTCC-CTTGTGAGACTTGACATCAGGCAAGAGTCTGAA 1412
Query 1456 AGACACTCTGATGTCTTGGATGCCATCACGACGCACTTAGGT-ATTGGTTCTTACAA-AG 1513
| ||| | |||||||||||||| ||||| | |||||| || || ||||| | | | ||
Sbjct 1413 CGCCACACAGATGTCTTGGATGCTATCACCAAGCACTT-GGACATCGGTTCCTCCTATAG 1471
Query 1514 A-A-TGGTCGGAGGATAAAA-GACAGGAATGGCTGT-TATCTGAGCTAAGCGGGAAACGC 1569
| | ||||| || || | ||||||||||||| | | |||| |||||||| || ||
Sbjct 1472 AGACTGGTCTGAAGA-AGGTCGACAGGAATGGCT-TCTGGCTGAACTAAGCGGCAAGCGT 1529
Query 1570 CCTCTCTTT-GGACCGGATCTTCCCAAAACCGAAGAGGTTGCAGATGTGTTGGACACTTT 1628
|| || ||| ||||| |||||||||||||||||||| || | ||||| ||||||| ||
Sbjct 1530 CCACT-TTTCGGACCTGATCTTCCCAAAACCGAAGAAATTTCTGATGTCCTGGACACATT 1588
Query 1629 CAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATTATCTCAATGGCCAC 1688
|||||| || |||||||| ||||| ||| ||||||| ||||| |||||||| ||||| ||
Sbjct 1589 CAAAGTTATATCTGAGCTGCCTTCAGATTGTTTTGGAGCTTACATTATCTCTATGGCAAC 1648
Query 1689 TGCTCCATCAG--ACGTGCTCGCTGTTGAGCTTTTGCAACGCGAATGCGG-GATCACTGA 1745
| | || | || | ||||| || ||||||||||| || || |||||| | | | |
Sbjct 1649 TTCACC-T-AGTGATGTGCTTGCGGTTGAGCTTTTACAGCGTGAATGCCATG-TGAAAAA 1705
Query 1746 TCCTCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGAT-TTAGAATCCGCACCTGCTG 1804
||| || |||||||| || | || ||||||||||| ||| || ||| | || ||||| |
Sbjct 1706 TCCACTAAGAGTTGTTCCACTCTTTGAGAAGCTAGCTGATCTT-GAAGCAGCTCCTGCCG 1764
Query 1805 CAGTTGCCCGTCTCTTCTCCATAGAATGGTACAGAAACAGGATCAATGG-AAAGCAAGAA 1863
| ||||| | ||||| || ||||| ||||||| |||| | || || || ||| |||||
Sbjct 1765 CTGTTGCAAGACTCTTTTCTATAGACTGGTACAAAAACCGTATTAACGGTAAA-CAAGAG 1823
Query 1864 GTCATGATCGGGTACTCTGACTC-GGGCAAAGATGCTGGTCGT-TTATCAGCGGCTTGGC 1921
|| ||||| || ||||| || || ||| ||||||||||| ||| || ||||| ||||||
Sbjct 1824 GTTATGATTGGTTACTCAGATTCAGGG-AAAGATGCTGGGCGTCTT-TCAGCTGCTTGGG 1881
Query 1922 AG-TTATACAA-GACTCAAGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTCAAGCT 1979
|| || ||||| | ||||||||||||| |||||||| || || ||||| ||||| |||||
Sbjct 1882 AGCTT-TACAAAG-CTCAAGAAGAGCTTGTGAAGGTTGCTAAGGAATATGGAGTGAAGCT 1939
Query 1980 GACAATGTTCCACGGAAGAGGTGGGACCGTTGGACGAGGAGGTGGACCTACCCATCTTGC 2039
|| |||||||| || | ||||| || || ||| |||||||||| || || ||||||||
Sbjct 1940 AACTATGTTCCATGGCCGTGGTGGCACAGTCGGAAGAGGAGGTGGTCCCACTCATCTTGC 1999
Query 2040 TATTTTGTCTCAGCCTCCGGATACCA-TTCATGGG-CAATT-GAGGGTAACGGTTCAAGG 2096
||| ||||||||||| |||||||| | || |||| | || ||| | |||||||| ||
Sbjct 2000 TATATTGTCTCAGCCACCGGATAC-AGTTAATGGCTCTCTTCGAG--TCACGGTTCAGGG 2056
Query 2097 TGAAGTTATTGAACAGTC-TTTCGGAGAAG-AGCACTTATGCTTTAGGACTCTTCAGCGT 2154
|||||| ||||| || || ||| ||||| | | |||||||||||||| || |||||||||
Sbjct 2057 TGAAGTCATTGAGCAATCATTT-GGAGAGGCA-CACTTATGCTTTAGAACACTTCAGCGT 2114
Query 2155 TTCACAGCTGCAACACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCTGAGTGG 2214
|||||||| || || || ||||| |||||| | || ||| |||| || || || ||||||
Sbjct 2115 TTCACAGCAGCTACTCTAGAGCACGGAATGAACCCTCCGATTTCACCAAAACCCGAGTGG 2174
Query 2215 CGTGTCCT--CATGGATGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTTGTCT 2272
|||| | | | || ||||||||||| | |||| ||||| |||||||| ||||| || |
Sbjct 2175 CGTG-CTTTGCTTG-ATGAAATGGCTGTTGTTGCAACTGAGGAATACCGATCTGTCGTTT 2232
Query 2273 TC-AAGGAGCCCCGTTTTGTTGAGTACTTCCGTCTGGCAACACCAGAGCTCGAGTATGGA 2331
|| ||| | || || ||||| ||||| ||||| || || || || ||||| |||||||||
Sbjct 2233 TCCAAGAA-CCTCGATTTGTCGAGTATTTCCGCCTCGCTACTCCGGAGCTGGAGTATGGA 2291
Query 2332 AGGATGAACATAGGAAGCCGACCATCAAAACGTAAACCAAGCGGAGGAATCGAGTCGCTG 2391
| ||||| || ||||| |||| ||||| || ||||| ||||| || ||||| || ||
Sbjct 2292 CGTATGAATATCGGAAGTAGACCTTCAAAGCGAAAACCGAGCGGTGGGATCGAATCTCTC 2351
Query 2392 CGTGCAATCCCGTGGATCTTTGCGTGGACTCAGACGAGGTTTCA-CTTACCCGTGTGGCT 2450
||||||||||| ||||||||||| ||||| ||||| || || || ||| || || ||| |
Sbjct 2352 CGTGCAATCCCATGGATCTTTGCTTGGACGCAGACAAGATTCCATCTT-CCTGTATGG-T 2409
Query 2451 T-GGCTTT-GGAGGAGCATTCAA--ACGCGTGATACA-GAAGGACAGTAAGAATC-TCAA 2504
| || ||| |||| |||||| | | ||| || || |||||| || |||| | || |
Sbjct 2410 TAGG-TTTCGGAGCAGCATTTAGGTATGCG--AT-CAAGAAGGAT-GTGAGAAACCTCCA 2464
Query 2505 CATGCT-CAAAGAGATGTACAACCAATGGCCATTCTTCCGTGTCACAATTGATCTAGTCG 2563
|||||| ||| || ||||| || |||||||| || ||||| ||||| || |||||| | |
Sbjct 2465 CATGCTGCAA-GATATGTATAAACAATGGCCCTTTTTCCGAGTCACCATCGATCTAATTG 2523
Query 2564 AAATGGTTTTCGCCAAAGGAGATCCCGGAATTGCGGCTCTGTATGACCGCCTCCTCGTCT 2623
||||||| |||||||| ||||| ||||| || || || |||| ||| || || ||||
Sbjct 2524 AAATGGTGTTCGCCAAGGGAGACCCCGGGATCGCTACTTTGTACGACAAACTTCTTGTCT 2583
Query 2624 CTGAAGAACT-TCAACCATTCGGTGA-ACAACTTC-GAGTTAACTACCAAGAGACCA-GA 2679
| ||||| | | | || || || | |||| | ||| |||| | || |||| ||
Sbjct 2584 CAGAAGATTTATGGGCTTTT-GGAGAGA-AACT-CAGAGCCAACTTTGATGAAACCAAGA 2640
Query 2680 CGCCTCCTCCTCCAGGTTGCAGGTCACAAAGACATT-TTAGAAGGTGACCCTTACTTGAG 2738
|||| |||||||| ||| || ||||||||| || || ||||| || ||||||||||
Sbjct 2641 A-CCTCGTCCTCCAGACTGCTGGACACAAAGACCTTCTT-GAAGGAGATCCTTACTTGAA 2698
Query 2739 GCAAAGGCTGCAG-CTTCGTGACCCATACATCACGACATTGAACGTGTGTCAAGCCTATA 2797
|| || || || || |||||| | ||||| ||||| | ||||| || |||||||| |
Sbjct 2699 ACAGAGACTA-AGGCTACGTGACTCTTACATTACGACCCTCAACGTTTGCCAAGCCTACA 2757
Query 2798 CACTCAAGCAG-ATCCGTGACCCAAGCTTCCACGTCAAAGTCCGGCCACATC-TCTCTAA 2855
|| | || || |||||||| ||| || | | || | | || ||||| | | || ||
Sbjct 2758 CATTGAAA-AGGATCCGTGATTCAAACTACAATGTGACTCTGCGACCACA-CATTTCCAA 2815
Query 2856 -G-GACTACATGGAGTCTAGTCCAG-CGGCTGA-G--CTCGTGAAACTGAATCCAAAGAG 2909
| || | |||| | || || | | | || | | ||||| || || || || | |||
Sbjct 2816 AGAGA-T-CATGCAATCAAG-CAAATCAGCACAAGAACTCGTCAAGCTTAACCCCACGAG 2872
Query 2910 TGAATACGCACCGGGACTTGAAGATACGGTTATCCTCACCATGAAGGGTATCGCTGCTGG 2969
||||||||| || |||||||| || || ||||| | ||||||||||| || || || ||
Sbjct 2873 TGAATACGCGCCTGGACTTGAGGACACACTTATCTTAACCATGAAGGGAATTGCCGCAGG 2932
Query 2970 TAT-GCAAAACACCGGTTAAG 2989
|| |||||||||||||||||
Sbjct 2933 -ATTGCAAAACACCGGTTAAG 2952
> Ahg474459 jgi|Araly1|474459|fgenesh2_kg.1__4413__AT1G53310.2
Length=3192
Score = 1604 bits (868), Expect = 0.0
Identities = 2287/2958 (77%), Gaps = 154/2958 (5%)
Strand=Plus/Plus
Query 115 GAGAAGATGGCTTCTATTGATGCTCAGC-TCAGGCTTCTTGCTCCTGGCAAGGTTTCTGA 173
||||||||||| || ||||||| ||| | || | | || | |||||| || ||| |||
Sbjct 93 GAGAAGATGGCATCAATTGATGTTCATCTTC-GTCAACTGGTTCCTGGTAAAGTTAGTGA 151
Query 174 AGACGACAAGCTTATCGAGTACGATGCTCTG-TTACTGGATCGATTTCTCGATATTCTTC 232
||||||||||||| | ||||| |||||| || || || ||||| |||||||||||||| |
Sbjct 152 AGACGACAAGCTTGTTGAGTATGATGCTTTGCTT-CTAGATCGGTTTCTCGATATTCTCC 210
Query 233 AGGATTTGCATGGCGAGGATGTCAGAG-AATTCGTTCAAGAATGC--TACGAAG--TTGC 287
|||||||||| || || ||| || | | || | ||||||| | || || | || || |
Sbjct 211 AGGATTTGCACGGTGAAGATCTCCGTGAAACT-GTTCAAG-A-GCTTTATG-AGCATT-C 265
Query 288 AGCTGATTACGATGGAAA-C-CGCAACACTGAGAAGCTTGAGGAGCTTGGAAATATGCTG 345
|| || || || ||||| | | ||| || ||||||| |||||||| |||||| ||||
Sbjct 266 TGCAGAATATGAAGGAAAGCATG-AAC-CTAAGAAGCTAGAGGAGCTAGGAAATTTGCTA 323
Query 346 ACGAGTTTGGATCCAGGGGATTCAATTGTTGTCACTAAATCATTCTC-CAACATGCTTAG 404
|||||||| |||||||| || || |||||| || ||||| | || || | |||||||||
Sbjct 324 ACGAGTTTAGATCCAGGAGACTCCATTGTTATCGCTAAAGCTTTTTCTC-ACATGCTTAA 382
Query 405 CTTGGCTAATCTGGCTGAGGAAGTCCAGATTGCTTACCGGCGTAGGATTAAGAAACTCAA 464
||| || ||| |||| |||||||| |||||||||||||| |||||||| ||||| || ||
Sbjct 383 CTTAGCCAATTTGGCCGAGGAAGTGCAGATTGCTTACCGTCGTAGGATCAAGAAGCTGAA 442
Query 465 GAAAGGTGATTTCGCTGATGAG-GCCTCTGCAACAACGGAATCTGA-CATTGAAGAGACT 522
|||||||||||| | ||||||| | |||||| || || |||||||| | ||||||| |||
Sbjct 443 GAAAGGTGATTTTGTTGATGAGAG-CTCTGCTACTACTGAATCTGATC-TTGAAGAAACT 500
Query 523 CTCAAGAGGCTT-TTGCAG--CTTAACAAGACTCCTGAAGAGGTCTTTGATGCTCTTAAG 579
|||||| |||| ||| || || || ||| ||||| ||||| ||||||||||||| |||
Sbjct 501 TTCAAGAAGCTTGTTGGAGATCTGAATAAGTCTCCTCAAGAGATCTTTGATGCTCTGAAG 560
Query 580 AATCAGACTGTTGACTTGGTTTTAACTGCTCATCCCACTCAATCTGTTCGTCGGTCTTTG 639
||||||||||| || |||||||| ||||||||||| ||||| ||||| | | || |||
Sbjct 561 AATCAGACTGTGGATTTGGTTTTGACTGCTCATCCTACTCAGTCTGTGAGAAGATCATTG 620
Query 640 CTCCA-AAAGTTTGGAAGGATTCGTGATTGTTTGACGC-AGTTATATGCAAAGGACATTA 697
|| || ||| ||| ||||| | || ||| || | | | || ||||| ||||| ||||
Sbjct 621 CTTCAGAAA-CATGGGAGGATAAGAGACTGTCTGGCTCAACTT-TATGCCAAGGATATTA 678
Query 698 CTCCTGATGACAAACAAGAACTCGATGAAGCTCTGCA-ACGAGAGATTCAAGCTGCTTTT 756
||||||||||||| ||||| |||||||| ||||| || | ||||||||||||| || ||
Sbjct 679 CTCCTGATGACAAGCAAGAGCTCGATGAGGCTCTTCAGA-GAGAGATTCAAGCGGCATTC 737
Query 757 CGCACAGATGAAATCCGAAGAACTCCTCCTACACCGCAAGATGAAATGAGAGCAGGGATG 816
|| |||||||||||| |||||| || || || || |||||||| ||||||||||| |||
Sbjct 738 CGAACAGATGAAATCAAAAGAACACCACCGACTCCTCAAGATGAGATGAGAGCAGGAATG 797
Query 817 AGCTACTTCCATGAGACAATCTGGAAAGGAGTTCCAAAG-TTCTTAAGACGTGTTGACAC 875
|| || |||||||| || ||||||||||| ||||| ||| ||||| | ||||| |||||
Sbjct 798 AGTTATTTCCATGAAACTATCTGGAAAGGTGTTCCTAAGTTTCTT-CGCCGTGTAGACAC 856
Query 876 AGCTTT-AAAGAACAT-TGGAATCAACGAGCGTGTTCCTTACAATGCGCC-TCTCATTCA 932
|||||| ||| ||||| ||| | || || |||||||| || ||||| || | | |||||
Sbjct 857 AGCTTTGAAA-AACATAGGGATTGAA-GAACGTGTTCCATATAATGCTCCAT-TGATTCA 913
Query 933 GTTCTCTTCTTGGATGGGCGGAGACCGTGATGGAAACCCGCGAGTAACTCCTGAAGTTAC 992
||||||||||||||||| || || |||||||| || || | || || |||||||| ||
Sbjct 914 ATTCTCTTCTTGGATGGGTGGTGATCGTGATGGTAATCCAAGGGTTACACCTGAAGTCAC 973
Query 993 AAGAGATGTATGCTTATTAGCTAGAATGATGGCTGCTAATCTCTACTTCT-CCCAGATAG 1051
|||||||| ||||| |||||||||||||||||||||| | | ||||| | ||| || |
Sbjct 974 CAGAGATGTTTGCTTGTTAGCTAGAATGATGGCTGCTACTATGTACTT-TAACCAAATCG 1032
Query 1052 AAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGAGGAACTTCGGGTTCGTGC-- 1109
|||||||||||||||||||||||||||||||||||||||| || || || || || ||
Sbjct 1033 AAGATCTTATGTTTGAGATGTCTATGTGGCGTTGCAATGACGAGCTGCGTGTGCGAGCTG 1092
Query 1110 A-GAACGTCA---AAGATGT-GCGAAGAGG-GATGCAAAACACTATATAGAATTCTGGAA 1163
| |||| ||| || || | | ||| || | ||| ||||| || ||||||||||||||
Sbjct 1093 ATGAACTTCACGCAA-AT-TCGAGAAAAGATGCTGCGAAACATTACATAGAATTCTGGAA 1150
Query 1164 A-CAAATCCCTGCGAAT-GAGCCATACCGAGCT-ATTCTTGGAGATGTGAGGGACAAGCT 1220
||| ||| | | || ||||||||||| | | |||||||| ||||| |||||||||||
Sbjct 1151 GTCAATTCC-TAC-AACCGAGCCATACCGTG-TGATTCTTGGCGATGTAAGGGACAAGCT 1207
Query 1221 GTA-CAACACACGTGAGCGTGCACGTCAGTTATT--GTCAAGCGGAGTTTCGGACGTTCC 1277
|| || ||||||||| || || | ||| || | | ||| ||| || || || ||
Sbjct 1208 TTATCA-CACACGTGAACGCGCTCATCAATTGCTCAG-CAAT-GGACACTCTGATGT-CC 1263
Query 1278 C-GAAGACGCGGTTTTCAC-AAGTGTGGATCAGTTTTTGGAGCCACTTGAGCTTTGTTAC 1335
| | ||| || ||||| || | |||| ||||| ||||| || |||||||| ||||||
Sbjct 1264 CTGTAGAGGCTACTTTCATTAACT-TGGAACAGTTCTTGGAACCTCTTGAGCTCTGTTAC 1322
Query 1336 AGGTCGCTCTGTG-ATTGCGGTGACAGACCTATTGCTGATGGAAGCCTGCTTGATTTCTT 1394
| || || ||| || | || ||| | || || || ||||||||||| |||||||| ||
Sbjct 1323 CGATCTCTGTGTTCAT-GTGGCGACCGTCCAATAGCAGATGGAAGCCTTCTTGATTTTTT 1381
Query 1395 -ACGCCAAGTGTCAACATTTGGCCT-TGCTCTTGTGAAACTTGATATCCGTCAAGAATCT 1452
| || |||| ||||| ||||| || | ||||||||| |||||| || | |||||||||
Sbjct 1382 GAGGC-AAGTCTCAACCTTTGGGCTCT-CTCTTGTGAGACTTGACATAAGGCAAGAATCT 1439
Query 1453 GAAAGACACTCTGATGTCTTGGATGCCATCACGACGCACTTAGGTATTGGTTCTTACAAA 1512
|| | ||| | ||||| |||||||| ||||| || || |||| ||| || || |||| |
Sbjct 1440 GACCGCCACACCGATGTATTGGATGCTATCACCACACATTTAGATATCGGATCCTACAGA 1499
Query 1513 GAATGGTCGGAGGATAAAA-GACAGGAATGGCTGTTATCTGAGCTAAGCGGGAAACGCCC 1571
|||||||| || || | | || |||||||| |||||||||||||| || ||||| ||
Sbjct 1500 GAATGGTCTGAAGA-ACGTCGCCAAGAATGGCTTTTATCTGAGCTAAGTGGCAAACGTCC 1558
Query 1572 TCTCTTT-GGACCGGATCTTCCCAAAACCGAAGAGGTTGCAGATGTGT-TGGACAC-TTT 1628
|| ||| || | |||||||| ||||||||||| | || ||||| | ||||||| |||
Sbjct 1559 GCT-TTTCGGTTCTGATCTTCCTAAAACCGAAGAAATAGCTGATGT-TCTGGACACGTTT 1616
Query 1629 CAAAGTCATTTCTGAGCTTCCTTCGGATAGTTTTGGTGCTTATATTATCTCAATGGCCAC 1688
|| ||||| | ||||| || | || || ||||||||||| |||||||| ||||| ||
Sbjct 1617 CAT-GTCATAGCAGAGCTACCAGCAGACAGCTTTGGTGCTTACATTATCTCTATGGCAAC 1675
Query 1689 TGCTCCATCAGACGTGCTCGCTGTTGAGCTTTTGCAACGCGAATGC-G-G-GATCACTGA 1745
||| || || || || | |||||||||||||| || || |||||| | | || || |
Sbjct 1676 TGCACCCTCTGATGTATTAGCTGTTGAGCTTTTACAGCGTGAATGCCGTGTGAA-ACAG- 1733
Query 1746 TCCTCTGAGAGTTGTCCCGTTGTTCGAGAAGCTAGCGGATTTAGAATCCGCACCTGCTGC 1805
||| |||||||||| ||| | || ||||||||||||||| | ||| | || ||||||||
Sbjct 1734 -CCTTTGAGAGTTGTTCCGCTCTTTGAGAAGCTAGCGGATCTGGAAGCAGCTCCTGCTGC 1792
Query 1806 AGTTGCCCGTCTCTTCTCCATAGAATGGTACA-GAAACAGGATCAATGGAAAGCAAGAAG 1864
|||||| | ||||| || | || ||||||| ||| | | || || || |||||||| |
Sbjct 1793 AGTTGCTAGGCTCTTTTCTGTTGATTGGTACAAGAACC-GTATTAACGGTAAGCAAGAGG 1851
Query 1865 TCATGATCGGGTACTCTGACTC-GGGCAAAGATGCTGGTCGTTTATCAGCGGCTTGGCAG 1923
| ||||| || || || || || ||| ||||| ||||| || ||||| || |||||||||
Sbjct 1852 TTATGATTGGTTATTCGGATTCAGGG-AAAGACGCTGGACGGTTATCCGCTGCTTGGCAG 1910
Query 1924 TTATACAA-GACTCAAGAAGAGCTCGTGAAGGTGGCAAAAGAATACGGAGTCAAGCTGAC 1982
|||||||| | ||||||||||||| |||||||| || ||||| ||||| || ||||| ||
Sbjct 1911 TTATACAAAG-CTCAAGAAGAGCTTGTGAAGGTTGCTAAAGAGTACGGTGTGAAGCTAAC 1969
Query 1983 AATGTTCCACGGAAGAGGTGGGACCGTTGGACGAGGAGGTGGACCTACCCATCTTGCTAT 2042
|||||| ||||| | ||||| || |||||| ||||||| ||||| ||||||||||||||
Sbjct 1970 AATGTTTCACGGTCGTGGTGGTACGGTTGGAAGAGGAGGCGGACCGACCCATCTTGCTAT 2029
Query 2043 TTTGTCTCAGCCTCCGGATACCATTCATGGG-CAATTGAGGGTAACGGTTCAAGGTGAAG 2101
|||||||||||||||||||| ||| | || | | | || ||||||||||||||||
Sbjct 2030 ATTGTCTCAGCCTCCGGATACTATTAACGGTTCGCTCC-GTGTCACGGTTCAAGGTGAAG 2088
Query 2102 TTATTGAACAGTC-TTTCGGAGAAGAGCACTTATGCTTTAGGACTCTTCAGCGTTTCACA 2160
| || || || || ||| || |||||||| ||||||||||| || ||||||||||||||
Sbjct 2089 TCATCGAGCAATCGTTT-GGTGAAGAGCATTTATGCTTTAGAACACTTCAGCGTTTCACC 2147
Query 2161 GCTGCAACACTTGAGCATGGAATGCATCCACCGGTTTCCCCTAAGCCTGAGTGGCGTGTC 2220
||||| ||||| ||||| || |||| ||| || |||| ||||| || || ||||| | |
Sbjct 2148 GCTGCTACACTCGAGCACGGTATGCGTCCTCCAATTTCGCCTAAACCAGAATGGCGCG-C 2206
Query 2221 CT--CATGGATGAAATGGCTATAATTGCCACTGAAGAATACCGTTCTGTTGTCTTC-AAG 2277
| | || |||||||||| | |||| || || || || ||||||||||| ||| |||
Sbjct 2207 TTTGCTTG-ATGAAATGGCGGTCGTTGCAACAGAGGAGTATCGTTCTGTTGTGTTCCAAG 2265
Query 2278 GAGCCCCGTTTTGTTGAGTACTTCCGTCTGGCAACACCAGAGCTCGAGTATGGAAGGATG 2337
| || || ||||| ||||||||||| || || ||||| || || |||||||| | |||
Sbjct 2266 AA-CCTCGGTTTGTCGAGTACTTCCGCCTTGCTACACCGGAACTAGAGTATGGTCGTATG 2324
Query 2338 AACATAGGAAGCCGACCATCAAAACGTAAACCAAGCGGAGGAATCGAGTCGCTGCGTGCA 2397
||||| |||||| |||| || || ||||||||||| || || || || || || |||||
Sbjct 2325 AACATTGGAAGCAGACCTTCGAAGCGTAAACCAAGTGGTGGCATTGAATCTCTCCGTGCT 2384
Query 2398 ATCCCGTGGATCTTTGCGTGGACTCAGACGAGGTTTCA-CTTACCC-GTGTGGCTTGGCT 2455
|| || |||||||| || |||||||| || || || || || ||| || |||||||| |
Sbjct 2385 ATTCCATGGATCTTCGCTTGGACTCAAACAAGATTCCATCT--CCCTGTATGGCTTGGAT 2442
Query 2456 TTGGAGGAGC-ATTCAAACGCGTGATAC-AGAAGGACAGT-AAGAATCTCAACATGCTCA 2512
||||| ||| ||| | || |||||| | | || || || ||||| ||| | ||||||
Sbjct 2443 TTGGATCAGCGATT-AGACACGTGAT-CGAAAAAGAT-GTCAAGAACCTCCATATGCTCC 2499
Query 2513 AAGAGATGTAC-AACCAATGGCCATTCTTCCGTGTCACAATTGATCT-AGTCGAAATGGT 2570
|||| |||||| ||| | ||||| ||||| | ||||| |||||||| | | ||||||||
Sbjct 2500 AAGATATGTACCAAC-ACTGGCCTTTCTTTAGAGTCACCATTGATCTCATT-GAAATGGT 2557
Query 2571 TTTCGCCAAAGGAGATCCCGGAATTGCGGCTCTGTATGACC-GCCTCCTCGTCTCTGAAG 2629
||||| |||||||||||||| ||||| ||| |||| || || || | || || || |
Sbjct 2558 GTTCGCTAAAGGAGATCCCGGGATTGCTGCTTTGTACGATAAGCTTCTT-GTTTCAGAGG 2616
Query 2630 AACT-TCAACCATTCGGTGA-ACAACTTC-GAGTTAACTACCAAGAGACCA-GACGCCTC 2685
|||| | || || ||||| | |||| | ||| ||| | | |||| |||| || | ||
Sbjct 2617 AACTCTGG-CCTTTTGGTGAGA-AACT-CAGAGCTAATTTCGAAGAAACCAAGAAAC-TC 2672
Query 2686 CTCCTCCAGGTTGCAGGTCACAAAGA-CATT-TTAGAAGGTGACCCTTACTTGAGGCAAA 2743
|||| ||| || || |||||||| | || || ||||| || |||||||||| || |
Sbjct 2673 ATCCTGCAGACCGCTGGACACAAAGATC-TTCTT-GAAGGAGATCCTTACTTGAAACAGA 2730
Query 2744 GGCTGCAG-CTTCGTGACCCATACATCACGACAT-TGAACGTGTGTCAAGCCTATACACT 2801
| ||| || || ||||| | ||||| ||||| | | || || |||||||| || ||| |
Sbjct 2731 GACTG-AGACTCCGTGATTCTTACATTACGAC-TCTCAATGTCTGTCAAGCTTACACATT 2788
Query 2802 CAAGCAGA-TCCGTGACCCAAGCTT-CCACGTCAAAGTCCGGCCACATC-TCTCTAAGGA 2858
||| ||| ||||||| ||||| || ||| || | | || || || | ||| ||||||
Sbjct 2789 GAAG-AGAATCCGTGATCCAAG-TTACCATGTGACTCTGCGACCTCA-CATCTGTAAGGA 2845
Query 2859 C-TA-C--A-TGGAGTCTAGTCCAGCGGCT-GAGCTCGT-GAAACTGAATCCAAAGAGTG 2911
|| | | | ||| | | ||||| | || ||| | || || || || | ||| |
Sbjct 2846 GATAGCGGAATCGAG-CAAA-CCAGCA-CAAGAACTCATCGAG-CTTAACCCGACGAGCG 2901
Query 2912 AATACGCACCGGGACTTGAAGATACGGTTATCCTCACCATGAAGGGTATCGCTGCTGGTA 2971
|||| ||||| |||||||||||||| | ||| | |||||||||||||| |||||||||
Sbjct 2902 AATATGCACCTGGACTTGAAGATACTCTCATCTTGACCATGAAGGGTATTGCTGCTGGTC 2961
Query 2972 TGCAAAACACCGGTTAAG 2989
| ||||||||||||||||
Sbjct 2962 TACAAAACACCGGTTAAG 2979
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119374827830
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5