BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G43490.1 Length=2852 Score E Sequences producing significant alignments: (Bits) Value Ahg935251 jgi|Araly1|935251|scaffold_403239.1 3975 0.0 Ahg486423 jgi|Araly1|486423|fgenesh2_kg.5__2415__AT3G59570.1 1461 0.0 > Ahg935251 jgi|Araly1|935251|scaffold_403239.1 Length=2380 Score = 3975 bits (2152), Expect = 0.0 Identities = 2308/2383 (97%), Gaps = 12/2383 (1%) Strand=Plus/Plus Query 15 gagacgagaagaAC--aaaaaaaaaaaGGAAGAAAACTTTGCGTGGATGAAAAAATGGAG 72 |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 2 GAGACGAGAAGAACAAAAAAAAAAAAAGGAAG-AAACTTTGCGTCGATGAAAAAATGGAG 60 Query 73 ATCGGAGAAGAAAATTCTCGATGACCATTGACCTTC---AGAGTTGGGAAGTGAGGACTG 129 ||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| Sbjct 61 ATCGGAGAAGAAAATCCTCGATGACCATTGACATTCAGAAGAGTTGGGAAGTGAGGACTG 120 Query 130 ATGTGTTCTGGTGGAGAAGGAAAACAATGGAGCTGTGGAAAAGCGGGTGTAGTGAGTTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATGTGTTCTGGTGGAGAAGGAAAACAATGGAGCTGTGGAAAAGCGGGTGTAGTGAGTTTG 180 Query 190 CAGAAAGTTGGATCTTTGGTTCGAGATTTGAGCGAGCCTTGTCTTTCACAGTCACGGATA 249 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 181 CAGAAAGTTGGATCTTTGGTTCGAGATTTGAGCGAGCCTTGTCTTTCACAATCGCGGATA 240 Query 250 CAGGTTGTTATAACTATCGGCAAAATGCTTAAGCCAGAGAAGTGGCAAGCGTCTTTTGAT 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CAGGTTGTTATAACTATCGGCAAAATGCTTAAGCCAGAGAAGTGGCAAGCGTCTTTTGAT 300 Query 310 AGCGACGGAAGAGTTTCTGGTTTCCAGAAGGCGCTTAAATTAATTATTTTAGGGGGAATC 369 ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 301 AGCGATGGAAGAGTTTCTGGTTTCCAAAAGGCGCTTAAATTAATTATTTTGGGGGGAATC 360 Query 370 GACCCATCTATTAGAGCTGAAGTTTGGGAATTTCTCCTTGGTTGTTATGCGTTGAGCAGC 429 ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 361 GACCCGTCTATTAGAGCTGAAGTTTGGGAATTTCTCCTTGGTTGTTATGCGTTGGGCAGC 420 Query 430 ACCTCTGAGTACCGTAATCAACTCAGGGTAGCTCGAAGGAAGCGATACAATGATTTGCTC 489 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 421 ACCTCTGAGTACCGTAATCAACTCAGGGTAGCTCGAAGGAAGCGATATAATGATTTGCTC 480 Query 490 AAGCAATGCCAGACGATGCATTCAAGTGTGGGAACTGGTTCACTTGCCTATGTTGTGGGA 549 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 481 AAGCAATGTCAGACGATGCATTCAAGTGTGGGAACTGGTTCACTTGCCTATGTCGTGGGT 540 Query 550 TCTAAAGTTATGGATATGCGGAAATCTTATAGAGATGAGGCAGTAAAGGTTGCTACTACA 609 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 541 TCTAAAGTTATGGATATGCGGAAATCTTATAGAGATGAGTCAGTAAAGGTTGCTACTACA 600 Query 610 GATGAAAACAGAGAAGATGCTTTTATAGATAATAATGATAATGCTAATACTGAAAATCAT 669 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GATGAAAACAGAGAAGAAGCTTTTATAGATAATAATGATAATGCTAATACTGAAAATCAT 660 Query 670 CACAGTGATTGGAGTAATAATGGTACTGATACATCTCATTTACACAGAAGGGGAAGTTCT 729 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 661 CACAGTGATTGGAGTAATAATGGTACTGATACATCTCATGTACACAGAAGGGGAAGTTCT 720 Query 730 AGTGAGTCAGTTGATTTAGTAAGTGGAAGAGAAAGTCCGGAGAGCGTAGTATACAACACT 789 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 AGTGAGTCAGTTGATTTAGTAAGTGGAAGAGAAAGTCCGGAGAGCGTAGTATACAACACT 780 Query 790 TCCTCCTTTGTATCTGCCTCTAGTCCTTATGGCTATGCTTCCCCTGACGGTTATTTCGAC 849 |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct 781 TCCTCCTTTGTATCTGCCTCTAGTCCATATGGCTTTGCTTCCCCTGACGGTTATTTCGAC 840 Query 850 TTTCCCTCGCTACCGGTTACAGATTTGTTTGGGAGAAATAGTTTAGATAAGATTGAGGTT 909 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 841 TTTCCCTCGCTACCGGTTACAGATTTGTTTGGGAGGAATAGTTTAGATAAGATTGAGGTT 900 Query 910 TCTACGCCAGATGAGGATGCTTCACTGAAAAGTGAATTAAGATCTGAGGATGAGGGAATG 969 ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 901 TCTACGCCAGACGAGGATGCTTCATTGAAAAGTGAATTAAGATCTGAGGATGAGGCAATG 960 Query 970 CACAATTTTCGAATTGATAAGAATGCTGATTTAATTAGAGAACAACGTAGGTCCACTCCA 1029 ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 961 CACAATTTTCGAATTGATAAGAATGCTGATTTAGTTAGAGAACAACGCAGGTCCACTCCA 1020 Query 1030 GAGATCAAAGTGATGCATTC-GGATTCTGTTGGACCATCGTCTTATACTGGTCGCAATGC 1088 |||||| || ||||||| || || |||||||||||||||||||||||||||||||||||| Sbjct 1021 GAGATCGAATTGATGCA-TCAGGGTTCTGTTGGACCATCGTCTTATACTGGTCGCAATGC 1079 Query 1089 AGAAATAGTTGATGGTCTGAGAATATCAGATGTCCCTGAAATGGCATCAGTAAAGGACAC 1148 |||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||| || Sbjct 1080 AGAAATAGTTAATGGTTTGACAATATCAGATGTCCCTGAAATGGCATCAGTGAAGGAGAC 1139 Query 1149 TCCCTCTCGTGTTGGGAATGTCACGGAAGATCGAGTGTCTGAATGGCTTTGGACTTTGCA 1208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1140 TCCCTCTCGTGTTGGGAATGTCACGGAAGATCGAGTGTCTGAATGGCTTTGGACTTTGCA 1199 Query 1209 TCGAATAGTTGTTGATGTGGTAAGGACGGATAGCCACCTTGAGTTTTATGAGGATCCAGG 1268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1200 TCGAATAGTTGTTGATGTGGTAAGGACGGATAGCCACCTTGAGTTTTATGAGGATCCAGG 1259 Query 1269 AAATCTAGGAAGAATGTCGGATATCCTTGCGGTTTATGCTTGGGTTGATCCTGCAACTGG 1328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1260 AAATCTAGGAAGAATGTCGGATATCCTTGCGGTTTATGCTTGGGTTGATCCTGCAACTGG 1319 Query 1329 TTATTGCCAAGGAATGAGTGATTTAGTCTCTCCTTTCGTGGTTCTATTTGAAGATAATGC 1388 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1320 TTATTGTCAAGGAATGAGTGATTTAGTCTCTCCTTTCGTGGTTCTGTTTGAAGATAATGC 1379 Query 1389 TGATGCCTTCTGGTGCTTTGAAATGCTCATAAGAAGAACGCGTGCGAATTTCCAAATGGA 1448 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 TGATGCCTTTTGGTGCTTTGAAATGCTCATAAGAAGAACGCGTGCGAATTTCCAAATGGA 1439 Query 1449 GGGACCAACTGGGGTGATGGATCAATTGCAATCATTGTGGCACATATTGCAGATTACAGA 1508 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1440 GGGACCAACTGGGGTGATGGATCAATTGCAATCACTGTGGCACATATTGCAGATTACAGA 1499 Query 1509 TAAAGATATATTTTCCCACTTATCGCGTATTGGGGCTGAAAGTCTTCATTTTGCCTTCCG 1568 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1500 TAAAGATATCTTTTCCCACTTATCGCGTATTGGAGCTGAAAGTCTTCATTTTGCCTTCCG 1559 Query 1569 GATGCTTTTAGTTCTGTTCCGACGGGAATTGTCTTTTAACGAAGCTCTCAGGATGTGGGA 1628 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1560 GATGCTCTTAGTTCTGTTCCGACGGGAATTGTCTTTTAACGAAGCTCTCAGGATGTGGGA 1619 Query 1629 GATGATGTGGGCAGCTGATTATGATGAATCTGTTACTGAAACTTTGGAGAATGATTGCTT 1688 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1620 GATGATGTGGGCAGCTGATTATGATGAATCTGTTGCTGAAACTTTGGAGAATGATTGCTT 1679 Query 1689 GGAGCCTTTGGTGATTCAGCTTCCAAGAAAATCTGAACCTGAGGTGAGTGAAGAAAT-GA 1747 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 1680 GGAGCCTTTGGTGATTCAGCTTCCAAGAAAATCTGAACCTGAGGTGAGTGAAG-AATCGA 1738 Query 1748 TAGAGGATGGAATTGGTAATAGTACAAAGAGGGAACCAATGATTTCAAAGAGCGGGCCAA 1807 ||||||||||||||||||||||||||||||||||||| | ||| |||||||| ||||||| Sbjct 1739 TAGAGGATGGAATTGGTAATAGTACAAAGAGGGAACCTACGATATCAAAGAGTGGGCCAA 1798 Query 1808 TTTCAAAGAGCAGCGGTTTGTTGTCAAGGAGCGGTTTGCTGCCGAAGAGTGGTCCGTTGC 1867 |||||||||| || |||||| |||| |||||||||||||||||||||||||||||||||| Sbjct 1799 TTTCAAAGAGTAGTGGTTTGCTGTCGAGGAGCGGTTTGCTGCCGAAGAGTGGTCCGTTGC 1858 Query 1868 CAAAGACTGC-GGGTCCTTTCTCTGATGAGAGTGAGATAAAGTCAGCATCATCCTCGTAT 1926 |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct 1859 CAAAGACTGCTGGG-CCTTTCTCTGATGAGAGTGAGATAAAGGCAGCATCATCCTCATAT 1917 Query 1927 CACTTTTGTGGGTTGACAAGAAGTCTTTGGTCAAGGAATGATAGAACAACACATGTCCCT 1986 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1918 CATTTTTGTGGGTTGACAAGAAGTCTTTGGTCAAGGAATGATAGAACAACACATGTCCCT 1977 Query 1987 TGTGTCGTTTCATCCATaaaaaaaGGGGATGATGCTCTTCCTGTCTTTTGTGTGGCGGCG 2046 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1978 TGTGTAGTTTCATCCATTAAAAAAGGGGATGATGCTCTTCCTGTCTTTTGTGTGGCGGCG 2037 Query 2047 ATTTTAATCATGAATCGACATAAGATCATGAAAGAAACTCGCTCGATCGATGACATGATA 2106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2038 ATTTTAATCATGAATCGACATAAGATCATGAAAGAAACTCGCTCGATCGATGACATGATA 2097 Query 2107 CAGATCTTCAATGATAAGGTTCTTGTATTCCGCGTGAGAAGATGCATACGTACAGCCATG 2166 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2098 CAGATCTTCAATGATAAGGTTCTTGTATTCCGCGTGAGAAGATGCATACGCACAGCCATG 2157 Query 2167 AAACTTCGTAGGAAATACATGTACAAGAGTCAGGTAATCAAGACTAAGAGTCACACTCAG 2226 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 2158 AAACTTCGTAGGAAATACATGTACAAGAGTCAGGTAATCAAGACCAAGAGCCACACTCAG 2217 Query 2227 TCTCAGAATCTCAACCAGGTTCATATCCAGCATCAAACCCATATGGAGAGCCAGAGGCCG 2286 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 2218 TCTCAGAATCTCAACCAGGTTCAAATCCAGCATCAAACCCATATGGAGAGCCAGAGACCG 2277 Query 2287 GAGGAGATTCAGAGCCATGGTGAGAACCAGAGCCAAACACCAAGTTTTCATCATAGTCCT 2346 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2278 GAGGAGATTCAGAGTCATGGTGAGAACCAGAGCCAAACACCAAGTTTACATCATAGTCCT 2337 Query 2347 GCCACTCAGAATGGTGACTAGGCGGGATTCCACCTATAACAGT 2389 ||||||||||||||||||||||| | ||||||||||||||||| Sbjct 2338 GCCACTCAGAATGGTGACTAGGCAGAATTCCACCTATAACAGT 2380 > Ahg486423 jgi|Araly1|486423|fgenesh2_kg.5__2415__AT3G59570.1 Length=2468 Score = 1461 bits (791), Expect = 0.0 Identities = 1503/1832 (82%), Gaps = 107/1832 (6%) Strand=Plus/Plus Query 126 ACTGATGTGTTCTGGTGGAGAAGGAAA-ACAATGGAGC-TGTGGAAAAGCGGGTGTAGTG 183 |||||||| |||||||||||| ||||| | |||||| | ||||| ||| | ||| | || Sbjct 258 ACTGATGTTTTCTGGTGGAGAGGGAAAGA-AATGGA-CTTGTGGGAAACCTGGTCTTGTA 315 Query 184 AGTTTGCAGAAAGT--TGG-ATCTTTGGTTCGAGATTTGAGCGAGCCTTGTCTTTCACAG 240 ||| | || ||||| ||| ||||||| |||| ||| ||||| |||||||||||||||| Sbjct 316 AGTCTACAAAAAGTGGTGGCATCTTTGCTTCGGGATCTGAGCCAGCCTTGTCTTTCACAA 375 Query 241 TCACGGATACAGGTTGTTATAACTATCGGCAAAATGCTTAAGCCAGAGAAGTGGCAAGCG 300 || |||| || |||||| ||||||||||||||||||||||||| ||||| ||||| || Sbjct 376 TCTGGGATTCAAGTTGTTTTAACTATCGGCAAAATGCTTAAGCCTGAGAAATGGCAGGC- 434 Query 301 TCTTTT-GATAGCGACGG-AAGAGTTTCTGGTTTCCAGAAGGCGCTTAAATTAATTATTT 358 | |||| ||| |||| || ||| |||||||||||||| |||||||| ||||||||||||| Sbjct 435 TTTTTTCGATTGCGATGGAAAG-GTTTCTGGTTTCCACAAGGCGCTCAAATTAATTATTT 493 Query 359 TAGGGGGAATCGACCCATCTATTAGAGCTGAAGTTTGGGAATTTCTCCTTGGTTGTTATG 418 | |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 494 TGGGGGGAATCGACCCATCTATAAGAGCTGAAGTTTGGGAATTTCTCCTTGGCTGTTATG 553 Query 419 CGTTGAGCAGCACCTCTGAGTACCGTAATCAACTCAGGGTAGCTCGAAG-GAAGCGATAC 477 | ||| |||||||||||||||| |||| |||||||||||||||||||| ||| |||||| Sbjct 554 CATTGGGCAGCACCTCTGAGTATCGTAGGCAACTCAGGGTAGCTCGAAGAGAA-CGATAC 612 Query 478 AATGATTTGCTCAAGCAATGCCAGACGATGCATTCAAGTGTGGGAACTGGTTCACTTGCC 537 ||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 613 AATGAGCTGCTCAAGCAATGCCAGATGATGCATTCTAGTGTGGGAACTGGTTCACTTGCC 672 Query 538 TATGTTGTGGGATCTAAAGTTATGGATATGCGGAAATCTTATAGAGATGAGGCAGTAAAG 597 |||||||||||||||||||||||||||||||| ||||| || | | |||||| |||||| Sbjct 673 TATGTTGTGGGATCTAAAGTTATGGATATGCGAAAATCATACAAAAATGAGGTTGTAAAG 732 Query 598 GTTGCTACTACAGATGAAAACAGAGAAGATGCTT-TTATAGATAATAATGATAATGCTAA 656 | |||| | ||||||| ||||| | | |||| || ||||| ||||| | | || Sbjct 733 GAAGCTA-T--AGATGAAGGCAGAG-A-A-GCTTGTT-TAGATGGTAATG---A-G--AA 779 Query 657 TACTGAAAATCATCACAGTGATTGGAGTAATAATGGTACTGATACATCTCATTTACACAG 716 |||||| |||| | | |||||||||||||||||| || | | ||||| | | ||||| Sbjct 780 CACTGAAGATCA-C-C-GTGATTGGAGTAATAATGACACCAACAAATCTCCTGTGCACAG 836 Query 717 AAGGGGAAGTTCTAGTGAGTCAGTTGATTTAGTAAGTGGAAGAGAAAGTCCGGAGAGCGT 776 ||||||||| || |||||||||||||| |||||||| || || | | | || Sbjct 837 AAGGGGAAGCTCCAGTGAGTCAGTTGACCTAGTAAGT---CCTGATAG--C--ACA--GT 887 Query 777 AGTATACAACACTTCCTCC-TTTGTATCTGCCTCTAGTCCTTATGGCTATGCTTCCCCT- 834 | ||| || |||| |||| |||||| |||| || ||||| ||||||| | |||||||| Sbjct 888 A-TAT-GAA-ACTT-CTCCTTTTGTACCTGCGTCCAGTCCATATGGCTTTCCTTCCCCTG 943 Query 835 G---A----C-G--GTTAT-TTCGACTTTCCCTCGCTACCGGTTACAGATTTGTTTGGGA 883 | | | | | ||| || ||||||||||| ||||||||||||||||||||||||| Sbjct 944 GTCCATTTGCAGATGATATCTTTGACTTTCCCTCTCTACCGGTTACAGATTTGTTTGGGA 1003 Query 884 GAAATAGTTTAGATAAGATTGAGG-TTTCTACGCCAGATGAGGATGCTTC-ACTGAAAAG 941 | | |||||||| |||| | || ||||||| |||||||| || |||| || | | || Sbjct 1004 GGAGTAGTTTAGGCAAGAAAG-GGATTTCTACTCCAGATGAAGAAACTTCAAC-GCATAG 1061 Query 942 TGAATTAAGATCTGAGGATGAGGGAATGCACAATTTTCGAATTGATAAGAATGCTGATTT 1001 ||| |||||||| ||||||||| ||||||||| |||||||||| | || ||||| ||||| Sbjct 1062 TGACTTAAGATCGGAGGATGAGAGAATGCACAGTTTTCGAATTTACAATAATGCAGATTT 1121 Query 1002 AATTAGAGAACAACGTAGGTCCACTCCAGAGATCAAAGTGA-TG--CATTC-GGATTCTG 1057 | ||| ||||| | | ||| | || | | | ||| || | || || || || |||| Sbjct 1122 AGTTATAGAACCGCATGGGT-C-TTCTA-ATAACAACGTAACTGTACA-TCATGAATCTG 1177 Query 1058 TTGGACCA-TCGTCTTATACTGGTC-GCAATG-CAGAAATAGTTGATGGTCTGAGAATAT 1114 || || | | |||| || |||| | || | | |||| || ||||||||| ||||||||| Sbjct 1178 TT-GAAAAGTTGTCTCATTCTGG-CTGC-ACGTCAGAGATTGTTGATGGTTTGAGAATAT 1234 Query 1115 CAGATGTCCCTGAAATGGCATCAGTAAAG-GACACTCCCT-CTCGTGTTGGGAATGTCAC 1172 ||||||||||||||| | | || | ||| || ||| ||| |||| | |||| ||| | Sbjct 1235 CAGATGTCCCTGAAACGCCGTC-GGCAAGTGAGACT-CCTACTCGAGGTGGGTCTGTAAA 1292 Query 1173 GGAAGATCGAGTGTCTGAATGGCTTTGGACTTTGCATCGAATAGTTGTTGATGTGGTAAG 1232 | |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||| Sbjct 1293 GAAAGATCGAGTGTCTGAATGGCTTTGGACATTGCACCGAATAGTTGTTGACGTGGTAAG 1352 Query 1233 GACGGATAGCCACCTTGAGTTTTATGAGGATCCAGGAAATCTAGGAAGAATGTCGGATAT 1292 ||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct 1353 GACAGATAGCCACCTTGAGTTCTACGAGGATCCAGGAAATCTAGGAAGAATGTCAGATAT 1412 Query 1293 CCTTGCGGTTTATGCTTGGGTTGATCCTGCAACTGGTTATTGCCAAGGAATGAGTGATTT 1352 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1413 CCTTGCGGTCTATGCTTGGGTTGATCCTGCAACTGGTTATTGCCAAGGAATGAGCGATTT 1472 Query 1353 AGTCTCTCC-TTTCGTGGTTCTATTTGAAGATAATGCTGATGCCTTCTGGTGCTTTGAAA 1411 ||| ||||| ||| ||| |||| ||||||||||||||||| ||||| ||||| ||||||| Sbjct 1473 AGTGTCTCCATTT-GTGTTTCTTTTTGAAGATAATGCTGACGCCTTTTGGTGTTTTGAAA 1531 Query 1412 TGCTCATAAGAAGAACGCGTGCGAATTTCCAAATGGAGGGACCAACTGGGGTGATGGATC 1471 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct 1532 TGCTCATAAGAAGAACGCGTGCAAATTTCCAGATGGAGGGACCAACTGGAGTGATGGATC 1591 Query 1472 AATTGCAATCATTGTGGCACATATTGCAGATT-ACAGATAAAGATATATTTTCCCACTTA 1530 ||||||||||| |||||| |||||||| | | ||||||||||| || ||||| ||| || Sbjct 1592 AATTGCAATCACTGTGGCGTATATTGCA-ACTCACAGATAAAGAAATGTTTTCACACCTA 1650 Query 1531 TCGCGTATTGGGGCTGAAAGTCTTCATTTTGCCTTCCGGATGCTTTTAGT-TCTGTTCCG 1589 || |||||||| ||||| || ||||| ||||| ||||||||||| ||||| | |||| || Sbjct 1651 TCACGTATTGGTGCTGAGAGCCTTCACTTTGCGTTCCGGATGCTGTTAGTGT-TGTTTCG 1709 Query 1590 ACGGGAATTGTCTTTTAACGAAGCTCTCAGGATGTGGGAGATGATGTGGGCAGCTGATTA 1649 ||| || |||||||||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct 1710 ACGAGAGTTGTCTTTTAACGAGGCTCTAAGGATGTGGGAGATGATGTGGGCTGCTGATTT 1769 Query 1650 TGATGAATCTGTTACTGAAACTTTGGAGAATGATTGCTTGGAGCCTTTGGT-GATTCAGC 1708 |||||| ||| || |||||||||| ||||| ||||||||| |||| ||||| | |||||| Sbjct 1770 TGATGAGTCTTTTGCTGAAACTTTAGAGAAGGATTGCTTGAAGCCGTTGGTTG-TTCAGC 1828 Query 1709 TTCCAAGAAA-ATCTGAACCTGAGGTGAGTGA--AGAAATGATAGAGGATGGAATTGGTA 1765 |||||| || ||||| | ||| || | || | ||| ||||| ||||||| ||| | Sbjct 1829 TTCCAA-AACGATCTGGAGTTGATATGGGGGACCATAAA--ATAGATGATGGAAATGGCA 1885 Query 1766 ATAGTACAAAGAGGGAACCAATGATTTCAAAGAGCGGGCC-AATTTCAAAGAGCAGCGGT 1824 || |||||| | ||||||| || | ||||||| || || ||||||| |||| | Sbjct 1886 CTACTACAAATTGTGAACCAAC--TT-CGAAGAGCGA-CCGAACTTCAAAGTGCAG---T 1938 Query 1825 TTGTTGTC-AAGGAGCGGTTTGCTGCC-GAAGAGTGGTCCGTTGCCAAAGACTGCGGGTC 1882 ||||||| ||| |||||| | ||||| ||| |||||||| |||||||| |||| | || Sbjct 1939 CTGTTGTCCAAG-AGCGGTCTACTGCCAGAA-AGTGGTCCATTGCCAAAAACTG-G--TC 1993 Query 1883 CTTTCTCTGATGAGAGTGAGATAAAGTCAGCA 1914 | | |||||||| | || ||| ||| ||||| Sbjct 1994 CGCTGTCTGATGATACTGGGATGAAGCCAGCA 2025 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 107643032370 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5