BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G43690.1
Length=1995
Score E
Sequences producing significant alignments: (Bits) Value
Ahg935280 jgi|Araly1|935280|scaffold_403268.1 3121 0.0
Ahg902383 jgi|Araly1|902383|Al_scaffold_0004_3033 1242 0.0
Ahg902384 jgi|Araly1|902384|Al_scaffold_0004_3034 957 0.0
Ahg359604 jgi|Araly1|359604|fgenesh1_pg.C_scaffold_462000002 957 0.0
Ahg333335 jgi|Araly1|333335|fgenesh1_pm.C_scaffold_462000001 322 6e-87
> Ahg935280 jgi|Araly1|935280|scaffold_403268.1
Length=2030
Score = 3121 bits (1690), Expect = 0.0
Identities = 1891/1991 (95%), Gaps = 2/1991 (0%)
Strand=Plus/Plus
Query 6 CATGTCTTGTAAAATCAACTGGTTGATGGTTCTGGTGATCATTGCTCTGTCTAATCTTGA 65
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 20 CATGTCTCGTAAAATCAACTGGTTGATGGTTCTGGTGATCATTGCTCTGTTTAATCTTGA 79
Query 66 AAGCTCACTTGGCAGGCTTGTTTTTGAGGGATCCGCCGGGTTAATGAATGGTTTCACGAC 125
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 80 AAACTCACTTGGCAGGCTTGTTTTTGAGGGATCCGCCGTGTTAATGAATGGTTTCACGAC 139
Query 126 GTTGACAAACACCAAGAAACACGCCTATGGTCAAGCCTTCAATGACGAGCCATTCCCTTT 185
|||||| ||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||
Sbjct 140 GTTGACGAACACCAAGAAGCACGCTTATGGTCAAGCCTTCGATGACAAGCCATTCCCTTT 199
Query 186 CAAGAATTCGGTCAACGGTAACATGACTTCGTTTTCATTTACCTTCTTCTTTGCTATCGT 245
|||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||||
Sbjct 200 CAAGAATTCGATCAACGGTGACGTGACTTCGTTTTCTTTTACCTTCTTCTTTGCTATCGT 259
Query 246 CCCTGAGCATATAGACAAAGGTTCTCACGGTATAGCCTTTGTGATCTCTCCCACGAGAGG 305
||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 260 CCCTGAGCATAGACACAAAGGCTCTCACGGTATGGCCTTTGTGATCTCTCCCACGAGAGG 319
Query 306 CATTCCTGGTGCATCCGCTGATCAGTACCTTGGTATCTTCAACGATACAAATGATGGAAA 365
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 320 CATTCCCGGTGCATCCGCTGATCAGTACCTTGGTATCTTCAACGATACAAATAATGGAAA 379
Query 366 TAGCTCCAACCATATCATTGCTGTGGAGCTTGATATACATAAAGACGATGAATTTGGTGA 425
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 380 AAGCTCCAACCATATCATTGCTGTGGAGCTTGATATCCATAAAGACGATGAATTTGGTGA 439
Query 426 CATTGATGATAACCATGTTGGTATCAATATTAATGGTATGAGATCTATTGTATCTGCTCC 485
|||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||
Sbjct 440 CATTGATGATAACCATGTTGGTATCAATATAAACGGTATGAGATCTACAGTATCTGCTCC 499
Query 486 TGCCGGTTATTATGATCAAAATGGTCAGTTCAAAAATCTTTCTTTAATCAGTGGAAATCT 545
||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 500 TGCCGGTTACTATGATCAAAAGGGTCAGTTCAAAAACCTTTCTTTAATCAGTGGAAATCT 559
Query 546 ACTCCGAGTCACGATTTTGTATAGCCAGGAAGAAAAACAGCTTAATGTCACCTTATCACC 605
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 560 ACTCCGAGTCACGATCTTGTATAGCCAGGAAGAAAAACAGCTTAATGTCACCTTATCTCC 619
Query 606 AGCAGAGGAAGCTAATGTCCCAAAGTGGCCTCTTCTTTCACTGAACAAAGATTTGTCACC 665
|||||||||||||||||||||||||| ||| ||||||||||||||| | |||||||||||
Sbjct 620 AGCAGAGGAAGCTAATGTCCCAAAGTTGCCGCTTCTTTCACTGAACCACGATTTGTCACC 679
Query 666 GTATCTTTCAAAGAATATGTATATCGGCTTCACAGCTTCCACTGGGTCGGTCGGAGCAAT 725
|||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 680 ATATCTTTCGAAGAATATGTATGTCGGCTTCATAGCTTCCACTGGGTCGGTCGGAGCAAT 739
Query 726 ACATTACATGTGGATGTGGTATGTATTTACCTTTATTATTGTTCCAAAACTGGATTTTGA 785
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 740 ACATTACATGTGGATGTGGTATGTGTTTACCTTTATTATTGTTCCACAACTGGATTTTGC 799
Query 786 TATACCAACCTTTCCTCCATATCCCAAGGCAGAGTCTCAGGTAAAGCTGATAGTTCTTGT 845
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 800 TATACCAACCTTTCCTCCATATCCTAAGGAAGAGTCTCAGGTAAAGCTGATAGTTCTTGT 859
Query 846 GACGTTCTTGACTTTGGCTCTCTTTGTTGCGCTTGCTGCATCAGCTTTAATTGTTTTCTT 905
||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 860 GACGTGCTTGACTTTGGCTCTCTTTGTTGCGCTTGCTGCATCAGCTTTTAGTGTTTTCTT 919
Query 906 CTATAAGAGACATAAGAAACTTTTGGAGGTTCTCGAGGAATGGGAAG-TCGAATGTGGAC 964
|||||||||||||||||| || |||||||||| |||||||||| || ||||||||||||
Sbjct 920 ATATAAGAGACATAAGAAAGTTATGGAGGTTCTAGAGGAATGGG-AGATCGAATGTGGAC 978
Query 965 CACATAGGTTTTCTTACAAAGAACTCTTCAATGCCACAAATGGTTTCAAACAACTTCTCG 1024
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||| | | |
Sbjct 979 CACATAGGTTTTCTTACAAAGAACTCTTTAATGCCACAAACGGTTTCAAACAACGTATAG 1038
Query 1025 GCGAAGGGGGGTTTGGTCCTGTCTTTAAAGGCACACTTTCAGGTTCAAATGCAAAGATTG 1084
|| ||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct 1039 GCAAAGGGGGATTTGGTCCGGTCTTTAAAGGCACACTTCCAGGTTCAAATGCAAAGATTG 1098
Query 1085 CTGTTAAACGGGTTTCTCATGACTCAAGTCAAGGAATGAGAGAATTATTGGCCGAGATTT 1144
|||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct 1099 CTGTTAAACGGGTTTCTCATGATTCGAGTCAAGGAATGAGAGAATTCTTGGCCGAGATTT 1158
Query 1145 CGACTATTGGTCGGCTTAGACACCCCAATCTAGTCAGGCTTCTTGGTTATTGCAGATACA 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159 CGACTATTGGTCGGCTTAGACACCCCAATCTAGTCAGGCTTCTTGGTTATTGCAGATACA 1218
Query 1205 AAGAAGAGCTCTACTTGGTTTATGACTTTCTGCCCAATGGAAGCCTTGACAAGTACCTTT 1264
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |
Sbjct 1219 AAGAAGAGCTCTACTTGGTTTATGACTTTATGCCCAATGGAAGCCTTGATAAGTACCTCT 1278
Query 1265 ACGGAACATCAGATCAAAAACAACTCTCTTGGAGTCAACGTTTCAAGATCATCAAAGATG 1324
|||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1279 ACGGAATATCAGATCAAGAACAACTCTCTTGGAGTCAACGTTTCAAGATCGTCAAAGATG 1338
Query 1325 TAGCCTCTGCACTCTCCTATCTCCATCATGGGTGGATACATGTCGTCATTCATAGAGACA 1384
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 1339 TAGCCTCTGCACTCTCCTATCTCCATCATGAGTGGGTACATGTCGTCATTCATAGAGACA 1398
Query 1385 TCAAGCCAGCAAACGTGCTAATCGATGACAAGATGAATGCAAGTCTTGGAGATTTCGGAT 1444
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 1399 TCAAGCCAGCAAACGTGCTAATCGATGACAAGATGAATGCATGTCTTGGGGATTTCGGAT 1458
Query 1445 TGGCTAAGGTATATGATCAAGGATATGATCCTCAAACCTCTAGAGTAGCTGGAACATTCG 1504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1459 TGGCTAAGGTATATGATCAAGGATATGATCCTCAAACCTCTAGAGTAGCTGGAACATTCG 1518
Query 1505 GGTACATGGCGCCAGAGATCATGAGAACCGGAAGACCAACTATGGGAACGGATGTTTACG 1564
|||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1519 GGTACATGGCACCAGAGATCATGAGAACCGGAAGACCAACCATGGGAACAGATGTTTACG 1578
Query 1565 CTTTTGGTATGTTTATGCTTGAAGTTTCTTGCGATAGAAAACTGTTTGAGCCACGAGCAG 1624
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1579 CTTTTGGTGTGTTTATGCTTGAAGTTTCTTGCGGTAGAAAACTGTTTGAGCCACGAGCAG 1638
Query 1625 AGTCGGAAGAGGCTATTCTTACTAACTGGGCGATAAATTGTTGGGAAAACGGTGATATTG 1684
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1639 AGTCGGAAGAGGCTATTCTTACAAACTGGGCGATAAATCGTTGGGAAAACGGTGATATTG 1698
Query 1685 TAGAGGCAGCTACTGAAAGAATCCGACAAGATAATGATAAGGGACAGCTCGAGCTTGTTC 1744
||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1699 TAGAGGCGGCTACTGAAAGAGTCCGACAAGATCATGATAAGGGACAGCTCGAGCTTGTTC 1758
Query 1745 TGAAGCTAGGAGTGTTATGTTCGCATGAGGCTGAAGAGGTTAGGCCGGATATGGCTACAG 1804
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |
Sbjct 1759 TGAAGCTAGGAGTGTTATGTTCACACCAGGCTGAAGAGGTTAGGCCGGATATGGCTACTG 1818
Query 1805 TTGTTAAGATTTTGAACGGAGTTTCTGAGCTTCCGGATAACCTGCTTGATATTGTTAGAT 1864
| |||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1819 TGGTTAAGATCTTGAACGGAGTTTCTGAGCTTCCAGATAATCTGCTTGATATTGTTAGAT 1878
Query 1865 CCGAGAAGTTGGAAAATTGGTACGAGAGGTACAGCAAAGTAATTGATCCGGTGACAACGG 1924
|||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 1879 CCGAGAAGTTTGAAAATTGGTACGAGAGGTACAGCAAAGTGCTTGATCCGGTGACGACGG 1938
Query 1925 AGGAGTCCATAGGTAACTTGGCCATTACGGAACCGATACTTCCGTCAGGCAGACCCAGGT 1984
||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct 1939 TGGAGTCCATAGGTAACTTGGCCATTACGGAACCTATACTTCCGTCGGGCAGACCAAGGT 1998
Query 1985 TGTTTCTCTAG 1995
|||||||||||
Sbjct 1999 TGTTTCTCTAG 2009
> Ahg902383 jgi|Araly1|902383|Al_scaffold_0004_3033
Length=1896
Score = 1242 bits (672), Expect = 0.0
Identities = 1065/1253 (85%), Gaps = 34/1253 (3%)
Strand=Plus/Plus
Query 25 TGGTTGATGGTTCTGGTGATCATTGCTCTGTCTAATCTTGAAAGCTCACTTGGCAGGCTT 84
||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 16 TGGTTAATGGTTCTGGTGATCATTGCTCTGTTTAATCTTGAAAACTCACTTGGCAGGCTT 75
Query 85 GTTTTTGAGGGATCCGCCGGG-TTAATGAATGGTTTCACGACGTTGACAAACACCAAGAA 143
||||||||||||||| | ||| || || ||||||||| | | ||||||||||||||||||
Sbjct 76 GTTTTTGAGGGATCCACTGGGATT-ATTAATGGTTTCCCAATGTTGACAAACACCAAGAA 134
Query 144 ACACGCCTATGGTCAAGCCTTCAATGACGAGCCATTCCCTTTCAAGAATTCGGTCAACGG 203
|||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 135 GCACGTCTATGGTCAAGCCTTCGATGACGAGCCATTCCCTTTCAAGAATTCGACCAACGG 194
Query 204 TAACATGACTTCGTTTTCATTTACCTTCTTCTTTGCTATCGTCCCTGAGCATATAGACAA 263
|||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| ||
Sbjct 195 TAACATGACTTCGTTTTCTTTTACCTTCTTCTTTGCTATCGTCCCTGGGCATAGAGA-AA 253
Query 264 -AGGTTCTCACGGTATAGCCTTTGTGATCTCTCCCACGAGAGGCATTCCTGGTGCATCCG 322
||| ||||||||||| ||||| |||||||| || || |||||| |||| ||||| | |
Sbjct 254 GAGGCTCTCACGGTATGGCCTTCGTGATCTCGCCTACAAGAGGCCTTCCAGGTGCTTTTG 313
Query 323 CTGATCAGTACCTTGGTATCTTCAACGATACAAATGATGGAAATAGCTCCAACCATATCA 382
||||||||||||| || || |||||||||||| | ||||||| ||||| || ||| |||
Sbjct 314 CTGATCAGTACCTCGGAATATTCAACGATACAGACAATGGAAAAAGCTCGAATCATGTCA 373
Query 383 TTGCTGTGGAGCTTGATATACATAAAGACGATGAATTTGGTGACATTGATGATAACCATG 442
||||||||||||| |||||||||||||| ||||||||||||||| || |||||||||| |
Sbjct 374 TTGCTGTGGAGCTCGATATACATAAAGATGATGAATTTGGTGACGTTAATGATAACCACG 433
Query 443 TTGGTATCAATATTAATGGTATGAGATCTATTGTATCTGCTCCTGCCGGTTATTATGATC 502
||||||| || |||||||| |||||||||| |||||||||||||||| |||| |||||
Sbjct 434 TTGGTATTAACATTAATGGAATGAGATCTAACATATCTGCTCCTGCCGGGTATTTTGATC 493
Query 503 AAAATGGTCAGTTCAAAAATCTTTCTTTAATCAGTGGAAATCTACTCCGAGTCACGATTT 562
|||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct 494 AAAAGGGTCAGTTCAAAAGCCTTTCTCTAATCAGTGGAAATCTACTCCGAGTCACGATTT 553
Query 563 TGTATAGCCAGGAAGAAAAACAGCTTAATGTCACCTTATCACCAGCAGAGGAAGCTAATG 622
|||||||||||||| |||||||||||| |||||||||||| || ||||||| ||| ||
Sbjct 554 TGTATAGCCAGGAAAAAAAACAGCTTAGCGTCACCTTATCATCACCAGAGGAGGCTTAT- 612
Query 623 T-CCCAAAGTG-GCCTCTTCT-TTCACTGAACAAAGATTTGTCACCGTATCT-TTCAAAG 678
| ||| || | ||| ||||| || ||||||| ||||| ||||||||||| | || | |
Sbjct 613 TACCCGAA-TCAGCCACTTCTATT-ACTGAACCAAGATCTGTCACCGTATTTGTTGGA-G 669
Query 679 AATATGTATATCGGCTTCACAGCTTCCACTGGGTCGGTCGGAGCAATACATTACATGTGG 738
|| |||||| |||||| ||| || ||||| || ||||| |||||| |||||||||| |||
Sbjct 670 AAAATGTATCTCGGCTACACTGCCTCCACAGGTTCGGTTGGAGCATTACATTACATATGG 729
Query 739 ATGTGGTATGTATTT-ACCTTTATTATTGTTCCAAAACTGGATTTTGATATACCAACCTT 797
| || |||| | | | | | | |||||| | |||||||| |||||| || ||
Sbjct 730 ACGTTACATGTGTATGATATCGCTG-TGGTTCCAGATCTGGATTTCCCTATACCGACGTT 788
Query 798 TCCTCCATATCCCAAGGCAGAGTCTCAGGTAA-AGCTGA-TAGTTCTTG-TGACGTT-CT 853
|||||||||||||||| || |||||||||||| | | || | || |||| |||| || ||
Sbjct 789 TCCTCCATATCCCAAGCCAAAGTCTCAGGTAAGA-CGGACT-GT-CTTGGTGAC-TTGCT 844
Query 854 TGACTTTGGCTC-TCTTTGTTGCGCTTGCTGCATCAGCTTTAATTGTTTTCTTCTATAAG 912
|||| |||| || ||||||||||| |||||||||||||||||| | | |||||||||| |
Sbjct 845 TGACATTGG-TCCTCTTTGTTGCGGTTGCTGCATCAGCTTTAAGTCTCTTCTTCTATA-G 902
Query 913 A-GACATAAGAAACTTTT-GGAGGTTCTCGAGGAATGGGA-AGTCGAATGTGGACCACAT 969
| ||||||| ||| || ||||||||| ||||||||||| | || ||||||| || |||
Sbjct 903 AAGACATAA-AAAGGTTAAGGAGGTTCTAGAGGAATGGGAGA-TCCAATGTGGGCCTCAT 960
Query 970 AGGTTTTCTTACAAAGAACTCTTCAATGCCACAAATGGTTTCAAACAACTTCTCGGCGAA 1029
|||||| |||||||||||||||| || |||||||| ||||||||||||||| | ||| ||
Sbjct 961 AGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAAGGGTTTCAAACAACTTGTGGGCAAA 1020
Query 1030 GGGGGGTTTGGTCCTGTCTTTAAAGGCACACTTTCAGGTTCAAATGCA-AAGATTGCTGT 1088
|| ||||| |||| || ||||| || |||||| |||||||| | ||| || ||||||||
Sbjct 1021 GGAGGGTTCGGTCAGGTTTTTAAGGGTACACTTCCAGGTTCAGACGCAGAA-ATTGCTGT 1079
Query 1089 TAAACGGGTTTCTCATGACTCAAGTCAAGGAATG-AGAGAATTATTGGCCGAGATTTCGA 1147
||||||| | |||||||| ||||| ||||||||| || ||||| || || ||||| ||||
Sbjct 1080 TAAACGGATCTCTCATGATTCAAGACAAGGAATGCAG-GAATTCTTAGCAGAGATATCGA 1138
Query 1148 CTATTGGTCGGCTTAGACACCCCAATCTAGTCAGGCTTCTTGGTTATTGCAGATACAAAG 1207
| ||| |||||||||||||||| || ||||||||||||| ||||| || || ||||| |
Sbjct 1139 CAATTTGTCGGCTTAGACACCCAAACCTAGTCAGGCTTCAGGGTTACTGTAGGTACAAGG 1198
Query 1208 AAGAGCTCTACTTGGTTTATGACTTTCTGCCCAATGGAAGCCTTGACAAGTAC 1260
| ||||| |||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 1199 AGGAGCTTTACTTGGTTTATGACTTTATGCCCAATGGAAGTCTTGACAAGTAC 1251
> Ahg902384 jgi|Araly1|902384|Al_scaffold_0004_3034
Length=1920
Score = 957 bits (518), Expect = 0.0
Identities = 921/1111 (83%), Gaps = 45/1111 (4%)
Strand=Plus/Plus
Query 115 GGTTTCACGACGTTGACAAACACCAAGAAACACGCCTATGGTCAAGCCTTCAATGACGAG 174
||||||| ||||||||| ||||||| ||| ||| | ||||||||||| ||| | ||| ||
Sbjct 112 GGTTTCAGGACGTTGACGAACACCACGAAGCACACATATGGTCAAGCATTCGACGACAAG 171
Query 175 CCATTCCCTTTCAAGAA-TTCGGTCAAC-GGTAAC-ATGACTTCGTTT-TCATTT-ACCT 229
||||||||||||||||| ||| || || ||| | |||||||| ||| || ||| ||||
Sbjct 172 CCATTCCCTTTCAAGAATTTC-CTC-ACAGGT-GCAATGACTTC-TTTCTC-TTTCACCT 226
Query 230 TCTTCTTTGCTATCGTCCCTGAGCATATAG-ACAAAGGTTCTCACGGTATAGCCTTTGTG 288
|||| |||||||||||||||||||||| || ||||||| ||||||||||| ||||| |||
Sbjct 227 TCTTTTTTGCTATCGTCCCTGAGCATA-AGCACAAAGGCTCTCACGGTATGGCCTTCGTG 285
Query 289 ATCTCTCCCACGAGAGGCATTCCTGGTGCATCCGCTGATCAGTACCTTGGTATCTTCAAC 348
|| ||||| || ||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct 286 ATTTCTCCTACAAGAGGCATTCCAGGTGCATCCGCAGATCAGTACCTCGGAATCTTCAAT 345
Query 349 GATA-CAAATGATGGAAATAGCTCCAACCATATCATTGCTGTGGAGCTTGATATACATAA 407
|| | ||| | || || | ||| || ||| |||| ||||||||||| |||||| ||||
Sbjct 346 GA-AGTAAACAACGGGAACAACTCGAATCATGTCATCGCTGTGGAGCTCGATATAAATAA 404
Query 408 AGACGATGAATTTGGTGACATTGATGATAACCATGTTGGTATCAATATTAATGGTATGAG 467
||| ||||||||||| |||||| | |||||||||||||||||||| || ||||| |||||
Sbjct 405 AGATGATGAATTTGGCGACATTAACGATAACCATGTTGGTATCAACATAAATGGGATGAG 464
Query 468 ATCTATTGTATCTGCTCCTGCCGGTTATTATGATCAAAATGGTCAGTTCAAAAATCTTTC 527
|||||||||||||||||||| ||||||||||||||| | ||||| |||| |||||||||
Sbjct 465 GTCTATTGTATCTGCTCCTGCTGGTTATTATGATCAAGAGGGTCAATTCAGAAATCTTTC 524
Query 528 TTTAATCAGTGGAAATCTACTCCGAGTCACGATTTTGTAT-AGCCAGGAAGAA-AAACAG 585
||| |||||||||||||||||||||||||||||||||||| | |||| ||||| ||| ||
Sbjct 525 TTTGATCAGTGGAAATCTACTCCGAGTCACGATTTTGTATGA-CCAG-AAGAAGAAAGAG 582
Query 586 CTTAATGTCACCTTATCACCAGC-AGAGGAAGCTAATGT-CCCAAAGTGGCCTCTTCTTT 643
|||| |||||| |||||| | || |||||||||| || | ||| ||| || |||||||
Sbjct 583 CTTAGTGTCACATTATCATC-GCCAGAGGAAGCTTAT-TACCCCAAGCAACCACTTCTTT 640
Query 644 CACTGAACAAAGATTTGTCACCGTATCTTTCAAAGAATATGTATATCGGCTTCACAGCTT 703
| || ||| ||||| ||||||||||||||| |||| |||||| ||||||||||||| |
Sbjct 641 CGCTAAACCAAGATCTGTCACCGTATCTTTTGGAGAAAATGTATGTCGGCTTCACAGCCT 700
Query 704 CCACTGGGTCGGTCGGAGCAATACATTACATGTGGATGTGGTAT-GTATTTACCTTTATT 762
| || |||||||| |||||||| || ||||||| ||| |||||| | || |||| | | |
Sbjct 701 CTACGGGGTCGGTTGGAGCAATGCACTACATGTCGATTTGGTATAG-ATATACCAT-ACT 758
Query 763 -ATTGTTCCAAAACTGGATTTTGATATACCAACCTTTCCTCCATATCCCAAGGCAGAGTC 821
||||||||| | |||||| | | || || || ||||||||||| ||||||| | | ||
Sbjct 759 GATTGTTCCAGACCTGGATATCGGGATCCCGACGTTTCCTCCATACCCCAAGGAAAAATC 818
Query 822 TCAGGTAAAGCTGATAGTTCTT-G--TGAC-GTTCTTGACTTTGGCTCTCTTTGTTGCGC 877
| |||||| | | | ||||| | |||| | |||| | ||||||||||| ||||||
Sbjct 819 ACTGGTAAATC-GC-A-TTCTTTGGGTGACCGG-CTTGGCATTGGCTCTCTTAGTTGCGA 874
Query 878 TTGCTGCATCAGCTTTAATTGTTTTCTTCTATAAGAGACATAAG-AAACTT-TTG--GAG 933
| |||||||||| ||| | | | ||||| |||| || | | || ||| | || |||
Sbjct 875 TGGCTGCATCAGGTTTTAGTCTCTTCTTATATA-GAAA-A-AACCAAA-TGGTTCAAGAG 930
Query 934 GTTCTCGAGGAATGGGA-AGTCGAATGTGGACCACATAGGTTTTCTTACAAAGAACTCTT 992
||||| ||||| ||||| | || || |||||| ||||||||||||||||||||||||||
Sbjct 931 GTTCTAGAGGAGTGGGAGATTCAAAA-TGGACCTCATAGGTTTTCTTACAAAGAACTCTT 989
Query 993 CAATGCCACAAATGGTTTCAAACAACTTCTCGGCGAAGGGGGGTTTGGTCCTGTCTTTAA 1052
|| |||||||||||||||||||||||||| ||| |||| ||||| |||| ||||||||
Sbjct 990 TAAAGCCACAAATGGTTTCAAACAACTTCTAGGCAAAGGAGGGTTCGGTCAGGTCTTTAA 1049
Query 1053 AGGCACACTTTCAGGTTCAAATGCAAAGATTGCTGTTAAACGGGTTTCTCATGACTCAAG 1112
|| |||||| ||||||| ||||||| ||||||||||||||||||||||||| || ||
Sbjct 1050 GGGAACACTTCCAGGTTCCGATGCAAATATTGCTGTTAAACGGGTTTCTCATGGTTCGAG 1109
Query 1113 TCAAGGAATGAGAGAATTATTGGCCGAGATTTCGACTATTGGTCGGCTTAGACACCCCAA 1172
|||||||||||||||||| ||||||||||| | ||||||||||||||||||||||| ||
Sbjct 1110 TCAAGGAATGAGAGAATTCTTGGCCGAGATAGCAACTATTGGTCGGCTTAGACACCCAAA 1169
Query 1173 TCTAGTCAGGCTTCTTGGTTATTGCAGATAC 1203
|||||| ||||||||||| || ||||| |||
Sbjct 1170 TCTAGTGAGGCTTCTTGGCTACTGCAG-TAC 1199
Score = 730 bits (395), Expect = 0.0
Identities = 619/726 (85%), Gaps = 20/726 (3%)
Strand=Plus/Plus
Query 1256 AGTACCTTTACGGAACATCAGATCAAAAACAACTCTCTTGGAGTCAACGTTTC-AAGATC 1314
||||||| || || |||||||||| |||| ||||||||| |||||||||| ||||||
Sbjct 1195 AGTACCTCTATGGCGGATCAGATCAAGAACAGTTCTCTTGGACTCAACGTTTCAAAGATC 1254
Query 1315 ATCAAAGATGTAGCCTCTGCACTCTCCTATCTCCATCAT-GGGTGGATACATGTCGTCAT 1373
|||||||| || |||||||||||||||||||||||| || | ||| |||| || || ||
Sbjct 1255 ATCAAAGACGTTGCCTCTGCACTCTCCTATCTCCAT-ATCGACTGGGTACAAGTTGTTAT 1313
Query 1374 TCATAGAGACATCAAGCCAGCAAACGTGCTAATCGATGACAAGATGAATGCAAGTCTTGG 1433
|||| ||||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct 1314 TCATCGAGACATCAAGCCTGCAAATGTCCTAATCGACGACAAGATGAATGCAAGTCTTGG 1373
Query 1434 AGATTTCGGATTGGCTAAGGTATATGATCAAGGATATGATCCTCAAACCTCTA-GAGTAG 1492
||||||||||||||||||| | ||||||||||||| ||||||||||||||||| | ||||
Sbjct 1374 AGATTTCGGATTGGCTAAGCTGTATGATCAAGGATTTGATCCTCAAACCTCTATG-GTAG 1432
Query 1493 CTGGAACATTCGGGTACATGGCGCCAGAGATCATGAGAACCGGAAGACCAACTATGGGAA 1552
||||||| |||||||| ||||| |||||| |||||||||| |||||| | || | ||| |
Sbjct 1433 CTGGAACCTTCGGGTATATGGCACCAGAGCTCATGAGAACTGGAAGATCGACCACGGGTA 1492
Query 1553 CGGATGTTTACGCTTTTGGTATGTTTATGCTTGAAGTTTCTTGCGATAGAAAACTGTTTG 1612
| ||||| || || |||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1493 CAGATGTCTATGCCTTTGGTGTGTTTATGCTTGAAGTTTCTTGCGGTAGAAAACTGTTTG 1552
Query 1613 AGCCACGAGCAGAGTCGGAAGAGG-CTATTCTTACTA-ACTGGGCGATAAATTGTTGGGA 1670
|| ||| ||||||| | ||||||| | ||||| | | |||||||||||||| |||||||
Sbjct 1553 AGTCACAAGCAGAGCCCGAAGAGGTCG-TTCTTGC-AGACTGGGCGATAAATCGTTGGGA 1610
Query 1671 AAACGGTGATATTGTAGAGGCAGCTACTGAAAGAATCCGACAAGATAATGATAAGGGACA 1730
||||||||||||||||||||| |||| |||||| |||||| ||||| |||| ||||||||
Sbjct 1611 AAACGGTGATATTGTAGAGGCGGCTAATGAAAGCATCCGAGAAGATCATGACAAGGGACA 1670
Query 1731 GCTCGAGCTTGTTCTGAAGCTAGGAGTGTTATGTTCGCATGAGGC-TGAAGAGGTTAGGC 1789
||| ||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||
Sbjct 1671 GCTTGAGCTTGTTCTGAAGCTAGGAGTGTTATGCTCGCAC-AGGGATGAAGAGATTAGGC 1729
Query 1790 CGGATATGGCTACAGTTGTTAAGATTTTGAACGGAGTTTCTGAGCTTCCGGATAACCTGC 1849
||||||||||||| || |||||||| ||||||||||||||||||||||||||||| || |
Sbjct 1730 CGGATATGGCTACGGTGGTTAAGATCTTGAACGGAGTTTCTGAGCTTCCGGATAATCTTC 1789
Query 1850 TTGATATTGTTAGATCCGAGAAGTTGGAAA-ATTGGTACGA-GAGGTACAGCAAA-GTAA 1906
| || ||||||||| | ||||| |||| || || ||||||| | | ||| | ||| ||
Sbjct 1790 TCGACATTGTTAGAACGGAGAAATTGGGAAGAT-GGTACGATGCG-TACGG-AAACGTGC 1846
Query 1907 TTGATCCGGTGACAACGGA-GGAGTCCATAGGTAACTTGGCCATTACGGAACCGAT-ACT 1964
||| | || || || | ||| || |||||||||| | |||||||||||||| |||
Sbjct 1847 TTGTTAGGGCGATTACA-ATGGAATCTGCAGGTAACTTGACGATTACGGAACCGATGACT 1905
Query 1965 TCCGTC 1970
||||||
Sbjct 1906 TCCGTC 1911
> Ahg359604 jgi|Araly1|359604|fgenesh1_pg.C_scaffold_462000002
Length=1196
Score = 957 bits (518), Expect = 0.0
Identities = 920/1109 (83%), Gaps = 48/1109 (4%)
Strand=Plus/Plus
Query 115 GGTTTCACGACGTTGACAAACACCAAGAAACACGCCTATGGTCAAGCCTTCAATGACGAG 174
||||||| ||||||||| ||||||| ||| ||| | ||||||||||| ||| | ||| ||
Sbjct 112 GGTTTCAGGACGTTGACGAACACCACGAAGCACACATATGGTCAAGCATTCGACGACAAG 171
Query 175 CCATTCCCTTTCAAGAA-TTCGGTCAAC-GGTAAC-ATGACTTCGTTT-TCATTT-ACCT 229
||||||||||||||||| ||| || || ||| | |||||||| ||| || ||| ||||
Sbjct 172 CCATTCCCTTTCAAGAATTTC-CTC-ACAGGT-GCAATGACTTC-TTTCTC-TTTCACCT 226
Query 230 TCTTCTTTGCTATCGTCCCTGAGCATATAG-ACAAAGGTTCTCACGGTATAGCCTTTGTG 288
|||| |||||||||||||||||||||| || ||||||| ||||||||||| ||||| |||
Sbjct 227 TCTTTTTTGCTATCGTCCCTGAGCATA-AGCACAAAGGCTCTCACGGTATGGCCTTCGTG 285
Query 289 ATCTCTCCCACGAGAGGCATTCCTGGTGCATCCGCTGATCAGTACCTTGGTATCTTCAAC 348
|| ||||| || ||||||||||| ||||||||||| ||||||||||| || ||||||||
Sbjct 286 ATTTCTCCTACAAGAGGCATTCCAGGTGCATCCGCAGATCAGTACCTCGGAATCTTCAAT 345
Query 349 GATA-CAAATGATGGAAATAGCTCCAACCATATCATTGCTGTGGAGCTTGATATACATAA 407
|| | ||| | || || | ||| || ||| |||| ||||||||||| |||||| ||||
Sbjct 346 GA-AGTAAACAACGGGAACAACTCGAATCATGTCATCGCTGTGGAGCTCGATATAAATAA 404
Query 408 AGACGATGAATTTGGTGACATTGATGATAACCATGTTGGTATCAATATTAATGGTATGAG 467
||| ||||||||||| |||||| | |||||||||||||||||||| || ||||| |||||
Sbjct 405 AGATGATGAATTTGGCGACATTAACGATAACCATGTTGGTATCAACATAAATGGGATGAG 464
Query 468 ATCTATTGTATCTGCTCCTGCCGGTTATTATGATCAAAATGGTCAGTTCAAAAATCTTTC 527
|||||||||||||||||||| ||||||||||||||| | ||||| |||| |||||||||
Sbjct 465 GTCTATTGTATCTGCTCCTGCTGGTTATTATGATCAAGAGGGTCAATTCAGAAATCTTTC 524
Query 528 TTTAATCAGTGGAAATCTACTCCGAGTCACGATTTTGTAT-AGCCAGGAAGAA-AAACAG 585
||| |||||||||||||||||||||||||||||||||||| | |||| ||||| ||| ||
Sbjct 525 TTTGATCAGTGGAAATCTACTCCGAGTCACGATTTTGTATGA-CCAG-AAGAAGAAAGAG 582
Query 586 CTTAATGTCACCTTATCACCAGC-AGAGGAAGCTAATGT-CCCAAAGTGGCCTCTTCTTT 643
|||| |||||| |||||| | || |||||||||| || | ||| ||| || |||||||
Sbjct 583 CTTAGTGTCACATTATCATC-GCCAGAGGAAGCTTAT-TACCCCAAGCAACCACTTCTTT 640
Query 644 CACTGAACAAAGATTTGTCACCGTATCTTTCAAAGAATATGTATATCGGCTTCACAGCTT 703
| || ||| ||||| ||||||||||||||| |||| |||||| ||||||||||||| |
Sbjct 641 CGCTAAACCAAGATCTGTCACCGTATCTTTTGGAGAAAATGTATGTCGGCTTCACAGCCT 700
Query 704 CCACTGGGTCGGTCGGAGCAATACATTACATGTGGATGTGGTAT-GTATTTACCTTTATT 762
| || |||||||| |||||||| || ||||||| ||| |||||| | || |||| | | |
Sbjct 701 CTACGGGGTCGGTTGGAGCAATGCACTACATGTCGATTTGGTATAG-ATATACCAT-ACT 758
Query 763 -ATTGTTCCAAAACTGGATTTTGATATACCAACCTTTCCTCCATATCCCAAGGCAGAGTC 821
||||||||| | |||||| | | ||||| || ||||||||||||||||||| | | ||
Sbjct 759 GATTGTTCCAGACCTGGATATCGGGATACCGACGTTTCCTCCATATCCCAAGGAAAAATC 818
Query 822 TC-AGGTAAAGCTGATAGTTCTT-G--TGAC-GTTCTTGACTTTGGCTCTCTTTGTTGCG 876
| || |||| | | | ||||| | |||| | |||| | ||||||||||| ||||||
Sbjct 819 ACTAG-TAAATC-GC-A-TTCTTTGGGTGACTGG-CTTGGCATTGGCTCTCTTAGTTGCG 873
Query 877 CTTGCTGCATCAGCTTTAATTGTTTTCTTCTATAAGAGACATAAG-AAACTT-TTG--GA 932
| |||||||||| ||| | | | ||||| |||| || | | || ||| | || ||
Sbjct 874 ATGGCTGCATCAGGTTTTAGTCTCTTCTTATATA-GAAA-A-AACCAAA-TGGTTCAAGA 929
Query 933 GGTTCTCGAGGAATGGGA-AGTCGAATGTGGACCACATAGGTTTTCTTACAAAGAACTCT 991
|||||| ||||| ||||| | || || |||||| |||||||||||||||||||||||||
Sbjct 930 GGTTCTAGAGGAGTGGGAGATTCAAAA-TGGACCTCATAGGTTTTCTTACAAAGAACTCT 988
Query 992 TCAATGCCACAAATGGTTTCAAACAACTTCTCGGCGAAGGGGGGTTTGGTCCTGTCTTTA 1051
| || |||||||||||||||||||||||||| ||| |||| ||||| |||| |||||||
Sbjct 989 TTAAAGCCACAAATGGTTTCAAACAACTTCTAGGCAAAGGAGGGTTCGGTCAGGTCTTTA 1048
Query 1052 AAGGCACACTTTCAGGTTCAAATGCAAAGATTGCTGTTAAACGGGTTTCTCATGACTCAA 1111
| || |||||| ||||||| ||||||| ||||||||||||||||||||||||| || |
Sbjct 1049 AGGGAACACTTCCAGGTTCCGATGCAAATATTGCTGTTAAACGGGTTTCTCATGGTTCGA 1108
Query 1112 GTCAAGGAATG-AGAGAATTATTGGCCGAGATTTCGACTATTGGTCGGCTTAGACACCCC 1170
||||||||||| || ||||| |||| ||||| ||||| ||||||||||||||||||||
Sbjct 1109 GTCAAGGAATGCAG-GAATTCCTGGCTGAGATATCGACAATTGGTCGGCTTAGACACCCA 1167
Query 1171 AATCTAGTCAGGCTTCTTGGTTATTGCAG 1199
||||| |||||||||||||||||||||||
Sbjct 1168 AATCTTGTCAGGCTTCTTGGTTATTGCAG 1196
> Ahg333335 jgi|Araly1|333335|fgenesh1_pm.C_scaffold_462000001
Length=1734
Score = 322 bits (174), Expect = 6e-87
Identities = 460/594 (77%), Gaps = 35/594 (6%)
Strand=Plus/Plus
Query 1283 AACAACTCTCTTGGAGTCAACGTTTCAAGATCATCAAAGATGTAGCCTCTGCACTCTCCT 1342
|||||||| ||||| | |||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1050 AACAACTCACTTGG-GACAACGTTTCAAGATCATCAAAGATGTAGCCTCTGGACTCTGTT 1108
Query 1343 ATCTCCATCATGGGTGGATACATGTCGTCATTCATAGAGACATCAAGCCAGCAAACGTGC 1402
|||| ||||| | |||| |||| ||||| |||||| |||| |||||||| ||||| || |
Sbjct 1109 ATCTGCATCACGAGTGGGTACAAGTCGTAATTCATCGAGATATCAAGCCTGCAAATGT-C 1167
Query 1403 TA-ATCGATGA-CAAGATGAATGCAAGTCTTGGAGATTTCGGATTGGCTAAGGTATA-TG 1459
| || || | || ||||||||| || || || |||||||| | || ||| | || |
Sbjct 1168 TTGATTGACCATCA-GATGAATGCGAGACTCGGGGATTTCGGGCTAGCCAAGTTGTACT- 1225
Query 1460 ATCAAGGATATGATCCTCAAACCTCTAGAGTAGCTGGAACATTCGGGTACATGGCGCCAG 1519
|||| || |||||||||||||| || ||||||||||||||||| |||||||| || || |
Sbjct 1226 ATCAGGGTTATGATCCTCAAACATCGAGAGTAGCTGGAACATTTGGGTACATTGCCCCCG 1285
Query 1520 AGATCATGAGAACCGGAAGACCAACTAT-GGGAACGGATGTTTACGCTTTT-GGTATGTT 1577
|| |||| |||| |||||| |||| | |||| | || || ||||| ||| || ||||
Sbjct 1286 AGCTCATAAGAAGTGGAAGAGCAACCACAGGGA-CAGACGTCTACGCCTTTCGGC-TGTT 1343
Query 1578 TATGCTTGAAGTTTCTTGCGATAGAAAACTGTTTGAGCCACGAGCAGAGTCGGAA-GAGG 1636
||| || ||||| ||||||| ||||| ||| | ||||||||||||| | || ||||
Sbjct 1344 TATACTGGAAGTCTCTTGCGGTAGAAGGCTGATAGAGCCACGAGCAGCCACC-AACGAGG 1402
Query 1637 CTATTC-TTACT-AACTGGGCGAT-A-AATTGTTGGGAAAACGGTGATATTGT-AGAGGC 1691
| || || | || ||| | || | ||| | ||||||||||| ||||| | | ||||
Sbjct 1403 -TCGTCCTTGCAGAA-TGGAC-ATTAGAAT-GCTGGGAAAACGGAGATATCCTTA-AGGC 1457
Query 1692 AGCTACTGAAAGAATCCGAC-AAGATA-ATGATAAGGGA-CAGCTCGAGCTTGTTCTGAA 1748
||| | ||||||| ||| || |||| | | ||| | || ||||||||| ||||||||||
Sbjct 1458 AGCCAATGAAAGACTCC-ACCAAGA-ACACAATA-GAGAACAGCTCGAGATTGTTCTGAA 1514
Query 1749 GCTAGGAGTGTTATGTTCGCATGAGGCTG-AAGAGGTTAGGCCGGATATGGCTACAGTTG 1807
|| ||||| ||||||||||| ||| || || || ||||||| || ||| ||| ||| |
Sbjct 1515 ACTGGGAGTATTATGTTCGCACCAGGTTGCAACAG-TTAGGCCTGACATGTCTAAAGTGG 1573
Query 1808 TTAAGATTTTGAACGGAGTTTCTGA-GCTTCCG-GATAACCTGCTTGATATTGT 1859
| ||| || ||||| | ||| || ||||||| | ||| |||| ||||||||
Sbjct 1574 TCCGGATCTTAAACGGTGATTC-GAAGCTTCCGAG-TAATTTGCTGGATATTGT 1625
Score = 235 bits (127), Expect = 9e-61
Identities = 162/179 (91%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 25 TGGTTGATGGTTCTGGTGATCATTGCTCTGTCTAATCTTGAAAGCTCACTTGGCAGGCTT 84
||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 16 TGGTTAATGGTTCTGGTGATCATTGCTCTGTTTAATCTTGAAAACTCACTTGGCAGGCTT 75
Query 85 GTTTTTGAGGGATCCGCCGGG-TTAATGAATGGTTTCACGACGTTGACAAACACCAAGAA 143
|||||||||| |||| | ||| || || ||||||||| | | ||||||||||||||||||
Sbjct 76 GTTTTTGAGGCATCCACTGGGATT-ATTAATGGTTTCCCAATGTTGACAAACACCAAGAA 134
Query 144 ACACGCCTATGGTCAAGCCTTCAATGACGAGCCATTCCCTTTCAAGAATTCGGTCAACG 202
|||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 135 GCACGTCTATGGTCAAGCCTTCGATGACGAGCCATTCCCTTTCAAGAATTCGACCAACG 193
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74999692405
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5