BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G43700.1
Length=3207
Score E
Sequences producing significant alignments: (Bits) Value
Ahg935280 jgi|Araly1|935280|scaffold_403268.1 1411 0.0
Ahg359604 jgi|Araly1|359604|fgenesh1_pg.C_scaffold_462000002 1223 0.0
Ahg902384 jgi|Araly1|902384|Al_scaffold_0004_3034 1188 0.0
Ahg902383 jgi|Araly1|902383|Al_scaffold_0004_3033 1166 0.0
Ahg333335 jgi|Araly1|333335|fgenesh1_pm.C_scaffold_462000001 706 0.0
Ahg914486 jgi|Araly1|914486|Al_scaffold_0001_4740 63.9 7e-09
> Ahg935280 jgi|Araly1|935280|scaffold_403268.1
Length=2030
Score = 1411 bits (764), Expect = 0.0
Identities = 1547/1918 (81%), Gaps = 81/1918 (4%)
Strand=Plus/Plus
Query 876 ATCAAAAATCATGTCTCGTACAATCGGCTCACGGGTCAT-TTTCT--TGATCCTTGCTCT 932
||||| |||||||||||||| |||| || || | || |||| ||||| |||||||
Sbjct 11 ATCAATAATCATGTCTCGTAAAATCAACT---GGTTGATGGTTCTGGTGATCATTGCTCT 67
Query 933 CTTCTGTTGTACTGAAAACTCCCGTGGCAAAC-TGGTTATGCAGGGATCCGCTG-GATTT 990
|| | | | ||||||||| | ||||| | || || || |||||||||| | | ||
Sbjct 68 GTT-TAATCT--TGAAAACTCACTTGGCAGGCTTGTTTTTG-AGGGATCCGCCGTG-TTA 122
Query 991 TTTAAAGGTTACAGGACGTTGACGAGCACCAAGAAGCACGCATATGGTCAAGCCTTCGAG 1050
| || |||| || ||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 123 ATGAATGGTTTCACGACGTTGACGAACACCAAGAAGCACGCTTATGGTCAAGCCTTCGAT 182
Query 1051 GACGAGATAGTCCCTTTCAAGAATTCGGCCAACGAT-ACAGTTACTTC-TTTCTCTGTCA 1108
||| || | ||||||||||||||||| ||||| | || || ||||| ||| ||| | |
Sbjct 183 GACAAGCCATTCCCTTTCAAGAATTCGATCAACGGTGAC-GTGACTTCGTTT-TCTTTTA 240
Query 1109 CGTTCTTCTTTGCTATCGCCCCTGAGGATAAG-CACAAAGGCGCTCATGGTATGGCCTTC 1167
| |||||||||||||||| ||||||| || || ||||||||| |||| |||||||||||
Sbjct 241 CCTTCTTCTTTGCTATCGTCCCTGAGCAT-AGACACAAAGGCTCTCACGGTATGGCCTTT 299
Query 1168 GTGATCTCTCCCACAAGAGGCATTACTGGTGCCTCCGCTGATCAGTACCTTGGAATCTTT 1227
|||||||||||||| ||||||||| | ||||| |||||||||||||||||||| |||||
Sbjct 300 GTGATCTCTCCCACGAGAGGCATTCCCGGTGCATCCGCTGATCAGTACCTTGGTATCTTC 359
Query 1228 AAC-AAAGCAAACAACGGGGATAGCTCAAATCATGTCATCGCTGTGGAGCTCGATATAAA 1286
||| | | |||| || || | ||||| || ||| |||| ||||||||||| ||||| |
Sbjct 360 AACGATA-CAAATAATGGAAAAAGCTCCAACCATATCATTGCTGTGGAGCTTGATATCCA 418
Query 1287 TAAAGATGAGGAATTTGGCGACATTAACGATAACCATGTTGGTATCAACATAAACGGAAT 1346
|||||| || |||||||| |||||| | |||||||||||||||||||| |||||||| ||
Sbjct 419 TAAAGACGATGAATTTGGTGACATTGATGATAACCATGTTGGTATCAATATAAACGGTAT 478
Query 1347 GAGGTCTATCA-AATTTGCTCCTGCTGGTTATTATGATCAAGAA-GGTCAATTTAAAGAT 1404
||| |||| || || ||||||||| ||||| ||||||||| || ||||| || ||| |
Sbjct 479 GAGATCTA-CAGTATCTGCTCCTGCCGGTTACTATGATCAA-AAGGGTCAGTTCAAAAAC 536
Query 1405 CTTTCTTTGATAAGTGGAAGTCTACTCCGAGTCACGATTTTGTATAGCCA-GATGGAAAA 1463
|||||||| || ||||||| |||||||||||||||||| ||||||||||| || |||||
Sbjct 537 CTTTCTTTAATCAGTGGAAATCTACTCCGAGTCACGATCTTGTATAGCCAGGA-AGAAAA 595
Query 1464 ACAGCTTAATGTCACCTTATCAT-CACCAGAGGAGGCTTAT-TACCCGAACAAGCCTCTT 1521
||||||||||||||||||||| | || ||||||| ||| || | ||| || ||| |||
Sbjct 596 ACAGCTTAATGTCACCTTATC-TCCAGCAGAGGAAGCTAATGT-CCCAAAGTTGCCGCTT 653
Query 1522 CTTTCATTGAACCAAGATCTATCACCCTATATTTTGGAGAACATGTATGTGGGCTTC-TC 1580
|||||| ||||||| ||| | ||||| ||| ||| | |||| |||||||| |||||| |
Sbjct 654 CTTTCACTGAACCACGATTTGTCACCATATCTTTCGAAGAATATGTATGTCGGCTTCAT- 712
Query 1581 AGCCTCAACGGGGTCTGTTAGAGCAATGCATTACATGTTGAGT-TGGTTTGTACATGGCG 1639
||| || || ||||| || ||||||| |||||||||| || | |||| ||| | |
Sbjct 713 AGCTTCCACTGGGTCGGTCGGAGCAATACATTACATGTGGA-TGTGGTATGTGTTTACCT 771
Query 1640 GCGTTGA-TGTTCCA-AACCTGGACTTGGGAATACCAACATTTCCTCCATATCCCAAGGA 1697
|| | ||||||| || ||||| || | |||||||| |||||||||||||| |||||
Sbjct 772 TTATT-ATTGTTCCACAA-CTGGATTTTGCTATACCAACCTTTCCTCCATATCCTAAGGA 829
Query 1698 AAAATCTCTGGTTTATCGGATTGTT-TTGGTGACCAGCTTGGCATTGGTTCTCTTTGTTG 1756
| | |||| ||| | | ||| ||| || ||||| ||||| | |||| |||||||||||
Sbjct 830 AGAGTCTCAGGTAAAGCTGATAGTTCTT-GTGACGTGCTTGACTTTGGCTCTCTTTGTTG 888
Query 1757 CGCTTGTTGCATCAGCTTTAAGTATCTTT-TTCTACAGGAGACATAA-AAAGGTTAAAGA 1814
|||||| |||||||||||| ||| | ||| || || | ||||||||| ||| |||| ||
Sbjct 889 CGCTTGCTGCATCAGCTTTTAGTGT-TTTCTTATATAAGAGACATAAGAAA-GTTATGGA 946
Query 1815 GGTTCTAGAGGAATGGGAGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTT 1874
|||||||||||||||||||||| ||||||| || ||||||||| ||||||||||||||||
Sbjct 947 GGTTCTAGAGGAATGGGAGATCGAATGTGGACCACATAGGTTTTCTTACAAAGAACTCTT 1006
Query 1875 TAAAGCCACAAAAGGTTTCAAACAACTTCTAGGCAAAGGAGGG-TTTGGTCAGGTCTTTA 1933
||| |||||||| ||||||||||||| | |||||||||| ||| ||||||| ||||||||
Sbjct 1007 TAATGCCACAAACGGTTTCAAACAACGTATAGGCAAAGG-GGGATTTGGTCCGGTCTTTA 1065
Query 1934 AGGGTACACTTCCAGGTTCTGATGCAGAGATTGCCGTTAAACGAATTTCACATGATTCAA 1993
| || |||||||||||||| ||||| ||||||| |||||||| |||| |||||||| |
Sbjct 1066 AAGGCACACTTCCAGGTTCAAATGCAAAGATTGCTGTTAAACGGGTTTCTCATGATTCGA 1125
Query 1994 AACAAGGAATGCAG-GAATTCTTGGCTGAGATATCGACAATTGGTCGGCTTAGACACCAG 2052
||||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct 1126 GTCAAGGAATG-AGAGAATTCTTGGCCGAGATTTCGACTATTGGTCGGCTTAGACACCCC 1184
Query 2053 AACCTAGTCAGGCTTCAGGGTTATTGTAGGTACAAGGAGGAACTCTACTTGGTTTATGAC 2112
|| ||||||||||||| |||||||| || ||||| || || ||||||||||||||||||
Sbjct 1185 AATCTAGTCAGGCTTCTTGGTTATTGCAGATACAAAGAAGAGCTCTACTTGGTTTATGAC 1244
Query 2113 TTTATGCCCAATGGAAGTCTTGACAAGTACCTCTACC-ACAGAGC-GAATCAAGAGCAAC 2170
||||||||||||||||| ||||| |||||||||||| | | | | || |||||| ||||
Sbjct 1245 TTTATGCCCAATGGAAGCCTTGATAAGTACCTCTACGGA-ATATCAGA-TCAAGAACAAC 1302
Query 2171 TCACTTGGAATCAACGTTTCAAGATCATCAAAGACATAGCCTCTGCACTCTGCTATTTGC 2230
|| |||||| |||||||||||||||| ||||||| ||||||||||||||| |||| | |
Sbjct 1303 TCTCTTGGAGTCAACGTTTCAAGATCGTCAAAGATGTAGCCTCTGCACTCTCCTATCTCC 1362
Query 2231 ATCATGAATGGGTACAAGTTGTAATTCATCGAGACATCAAGCCGGCAAATGTCCTGATTG 2290
||||||| |||||||| || || |||||| ||||||||||||| ||||| || || || |
Sbjct 1363 ATCATGAGTGGGTACATGTCGTCATTCATAGAGACATCAAGCCAGCAAACGTGCTAATCG 1422
Query 2291 ACCACCAA-ATGAATGCAAGGCTCGGGGATTTTGGGTTGGCTAAGTTGTACGATCAGGGT 2349
| || || ||||||||| | || |||||||| || ||||||||| | || ||||| ||
Sbjct 1423 ATGAC-AAGATGAATGCATGTCTTGGGGATTTCGGATTGGCTAAGGTATATGATCAAGGA 1481
Query 2350 TATGATCCTCAGACATCTAGAGTTGCTGGGACATTCTGGTACATTGCACCGGAGCTCATA 2409
||||||||||| || |||||||| ||||| |||||| ||||||| ||||| ||| ||||
Sbjct 1482 TATGATCCTCAAACCTCTAGAGTAGCTGGAACATTCGGGTACATGGCACCAGAGATCATG 1541
Query 2410 AGAAGCGGAAGAGCAACCACAGGGA-CAGACGTCTATGCCTTCGG-GCTGTTTATGCTAG 2467
|||| ||||||| |||||| |||| |||| || || || || || | |||||||||| |
Sbjct 1542 AGAACCGGAAGACCAACCAT-GGGAACAGATGTTTACGCTTTTGGTG-TGTTTATGCTTG 1599
Query 2468 AAGTCTCTTGCGGTAGGAGGCTGATAGAGCGAAGAACAGCCTCCGACGAGG-TCGTCCTA 2526
|||| ||||||||||| | ||| | |||| | || ||| || || |||| | || ||
Sbjct 1600 AAGTTTCTTGCGGTAGAAAACTGTTTGAGCCACGAGCAGAGTCGGAAGAGGCTATTCTTA 1659
Query 2527 GCTGAA-TGGAC-ATTAAAGT-GCTGGGAAAACGGAGATATTCTCGAGGCAGTCAA-TGA 2582
| || ||| | || ||| | | ||||||||||| |||||| | ||||| | | | |||
Sbjct 1660 -CA-AACTGGGCGAT-AAA-TCGTTGGGAAAACGGTGATATTGTAGAGGCGG-CTACTGA 1714
Query 2583 TGGAATCCGTCACGAAGA-CA--ATA-GAGAACAGCTCGAGCTTGTTTTGAAATTGGGAG 2638
|| |||| || |||| || ||| | || ||||||||||||||| |||| | ||||
Sbjct 1715 AAGAGTCCG--AC-AAGATCATGATAAGGGA-CAGCTCGAGCTTGTTCTGAAGCTAGGAG 1770
Query 2639 TGTTGTGTTCGCACCAGGCTGTAGCAA-TTAGGCCAGACATGTCTAAGGTGGTCCAGATC 2697
|||| ||||| |||||||||| || | ||||||| || ||| ||| ||||| |||||
Sbjct 1771 TGTTATGTTCACACCAGGCTGAAG-AGGTTAGGCCGGATATGGCTACTGTGGTTAAGATC 1829
Query 2698 TTGGGTGGTGAT-CTGCAGCTTCCAGATAATCTACTCGATATAGTCAAAGCAGAGAAG 2754
||| || | | ||| |||||||||||||||| || ||||| || | | | ||||||
Sbjct 1830 TTGAACGGAGTTTCTG-AGCTTCCAGATAATCTGCTTGATATTGTTAGATCCGAGAAG 1886
> Ahg359604 jgi|Araly1|359604|fgenesh1_pg.C_scaffold_462000002
Length=1196
Score = 1223 bits (662), Expect = 0.0
Identities = 1031/1208 (85%), Gaps = 30/1208 (2%)
Strand=Plus/Plus
Query 886 ATGTCTCGTACAATCGGCTCACGGGTCATTTTCTTGATCCTTGCTCTCTTCTGTTGTACT 945
||||||||| |||| |||||| |||||||||||||| |||||| | ||||||||||||
Sbjct 1 ATGTCTCGTGTAATCATCTCACGAGTCATTTTCTTGATTCTTGCTTTGTTCTGTTGTACT 60
Query 946 GAAAACTCCCGT-GGCAAACTGGTTAT-GCAGGGATCCGCTGGATTTTTTAAAGGTTACA 1003
|| ||||||| | || |||||| || | | | ||||| |||||| |||| ||||||| ||
Sbjct 61 GATAACTCCCATAGG-AAACTGATT-TGGGAAGGATCGGCTGGAGTTTTCAAAGGTTTCA 118
Query 1004 GGACGTTGACGAGCACCAAGAAGCACGCATATGGTCAAGCCTTCGAGGACGAGATAGTCC 1063
|||||||||||| ||||| ||||||| ||||||||||||| ||||| ||| || | |||
Sbjct 119 GGACGTTGACGAACACCACGAAGCACACATATGGTCAAGCATTCGACGACAAGCCATTCC 178
Query 1064 CTTTCAAGAA-TTCGGC-CAAC-GATACAGTTACTTCTTTCTCTGTCACGTTCTTCTTTG 1120
|||||||||| ||| | | || | | || | |||||||||||| |||| ||||| ||||
Sbjct 179 CTTTCAAGAATTTC--CTC-ACAGGTGCAATGACTTCTTTCTCTTTCACCTTCTTTTTTG 235
Query 1121 CTATCGCCCCTGAGGATAAGCACAAAGGCGCTCATGGTATGGCCTTCGTGATCTCTCCCA 1180
|||||| ||||||| |||||||||||||| |||| ||||||||||||||||| ||||| |
Sbjct 236 CTATCGTCCCTGAGCATAAGCACAAAGGCTCTCACGGTATGGCCTTCGTGATTTCTCCTA 295
Query 1181 CAAGAGGCATTACTGGTGCCTCCGCTGATCAGTACCTTGGAATCTTTAACAAAGCAAACA 1240
||||||||||| | ||||| ||||| ||||||||||| |||||||| || ||| |||||
Sbjct 296 CAAGAGGCATTCCAGGTGCATCCGCAGATCAGTACCTCGGAATCTTCAATGAAGTAAACA 355
Query 1241 ACGGGGATAGCTCAAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGAGGAAT 1300
||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 356 ACGGGAACAACTCGAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGATGAAT 415
Query 1301 TTGGCGACATTAACGATAACCATGTTGGTATCAACATAAACGGAATGAGGTCTATCAAAT 1360
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 416 TTGGCGACATTAACGATAACCATGTTGGTATCAACATAAATGGGATGAGGTCTATTGTAT 475
Query 1361 TTGCTCCTGCTGGTTATTATGATCAAGAAGGTCAATTTA-AAGATCTTTCTTTGATAAGT 1419
||||||||||||||||||||||||||| |||||||| | || ||||||||||||| |||
Sbjct 476 CTGCTCCTGCTGGTTATTATGATCAAGAGGGTCAATTCAGAA-ATCTTTCTTTGATCAGT 534
Query 1420 GGAAGTCTACTCCGAGTCACGATTTTGTAT-AGCCAGATGGAA-AAACAGCTTAATGTCA 1477
|||| ||||||||||||||||||||||||| | ||||| | || ||| |||||| |||||
Sbjct 535 GGAAATCTACTCCGAGTCACGATTTTGTATGA-CCAGAAG-AAGAAAGAGCTTAGTGTCA 592
Query 1478 CCTTATCATCACCAGAGGAGGCTTATTACCCGAA-CAAGCCTCTTCTTTCATTGAACCAA 1536
| |||||||| |||||||| ||||||||||| || ||| || |||||||| | ||||||
Sbjct 593 CATTATCATCGCCAGAGGAAGCTTATTACCCCAAGCAA-CCACTTCTTTCGCTAAACCAA 651
Query 1537 GATCTATCACCCTATATTTTGGAGAACATGTATGTGGGCTTCTCAGCCTCAACGGGGTCT 1596
||||| ||||| ||| |||||||||| |||||||| |||||| ||||||| ||||||||
Sbjct 652 GATCTGTCACCGTATCTTTTGGAGAAAATGTATGTCGGCTTCACAGCCTCTACGGGGTCG 711
Query 1597 GTTAGAGCAATGCATTACATGTTGAGTTGGTTT-GTACATGGCGG-CGTTGAT-GTTCCA 1653
||| |||||||||| ||||||| || ||||| | | | || | | | ||| ||||||
Sbjct 712 GTTGGAGCAATGCACTACATGTCGATTTGGTATAG-ATATACCATAC-T-GATTGTTCCA 768
Query 1654 AACCTGGACT-T-GGGAATACCAACATTTCCTCCATATCCCAAGGAAAAATCTCTGGTTT 1711
||||||| | | |||| |||| || |||||||||||||||||||||||||| || ||
Sbjct 769 GACCTGGA-TATCGGGA-TACCGACGTTTCCTCCATATCCCAAGGAAAAATCACTAGTAA 826
Query 1712 ATCGGATTGTTTTGGTGACCAGCTTGGCATTGGTTCTCTTTGTTGCGCTTGTTGCATCAG 1771
|||| ||| ||| |||||| |||||||||||| |||||| |||||| | | ||||||||
Sbjct 827 ATCGCATTCTTTGGGTGACTGGCTTGGCATTGGCTCTCTTAGTTGCGATGGCTGCATCAG 886
Query 1772 CTTTAAGTATCTTTTTCTACAGGAGACATAAAAAGGTTAAAGAGGTTCTAGAGGAATGGG 1831
||| ||| |||| || || || | | | ||| |||| |||||||||||||||| ||||
Sbjct 887 GTTTTAGTCTCTTCTTATATAGAAAAAACCAAATGGTTCAAGAGGTTCTAGAGGAGTGGG 946
Query 1832 AGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAAAGGTT 1891
|||| ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 947 AGATTCAAAATGGACCTCATAGGTTTTCTTACAAAGAACTCTTTAAAGCCACAAATGGTT 1006
Query 1892 TCAAACAACTTCTAGGCAAAGGAGGGTTTGGTCAGGTCTTTAAGGGTACACTTCCAGGTT 1951
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1007 TCAAACAACTTCTAGGCAAAGGAGGGTTCGGTCAGGTCTTTAAGGGAACACTTCCAGGTT 1066
Query 1952 CTGATGCAGAGATTGCCGTTAAACGAATTTCACATGATTCAAAACAAGGAATGCAGGAAT 2011
| |||||| | ||||| |||||||| |||| |||| ||| | ||||||||||||||||
Sbjct 1067 CCGATGCAAATATTGCTGTTAAACGGGTTTCTCATGGTTCGAGTCAAGGAATGCAGGAAT 1126
Query 2012 TCTTGGCTGAGATATCGACAATTGGTCGGCTTAGACACC-AGAACCTAGTCAGGCTTCAG 2070
|| |||||||||||||||||||||||||||||||||||| | || || ||||||||||
Sbjct 1127 TCCTGGCTGAGATATCGACAATTGGTCGGCTTAGACACCCA-AATCTTGTCAGGCTTCTT 1185
Query 2071 GGTTATTG 2078
||||||||
Sbjct 1186 GGTTATTG 1193
> Ahg902384 jgi|Araly1|902384|Al_scaffold_0004_3034
Length=1920
Score = 1188 bits (643), Expect = 0.0
Identities = 1019/1199 (85%), Gaps = 32/1199 (3%)
Strand=Plus/Plus
Query 886 ATGTCTCGTACAATCGGCTCACGGGTCATTTTCTTGATCCTTGCTCTCTTCTGTTGTACT 945
||||||||| |||| |||||| |||||||||||||| |||||| | ||||||||||||
Sbjct 1 ATGTCTCGTGTAATCATCTCACGAGTCATTTTCTTGATTCTTGCTTTGTTCTGTTGTACT 60
Query 946 GAAAACTCCCGT-GGCAAACTGGTTAT-GCAGGGATCCGCTGGATTTTTTAAAGGTTACA 1003
|| ||||||| | || |||||| || | | | ||||| |||||| |||| ||||||| ||
Sbjct 61 GATAACTCCCATAGG-AAACTGATT-TGGGAAGGATCGGCTGGAGTTTTCAAAGGTTTCA 118
Query 1004 GGACGTTGACGAGCACCAAGAAGCACGCATATGGTCAAGCCTTCGAGGACGAGATAGTCC 1063
|||||||||||| ||||| ||||||| ||||||||||||| ||||| ||| || | |||
Sbjct 119 GGACGTTGACGAACACCACGAAGCACACATATGGTCAAGCATTCGACGACAAGCCATTCC 178
Query 1064 CTTTCAAGAA-TTCGGC-CAAC-GATACAGTTACTTCTTTCTCTGTCACGTTCTTCTTTG 1120
|||||||||| ||| | | || | | || | |||||||||||| |||| ||||| ||||
Sbjct 179 CTTTCAAGAATTTC--CTC-ACAGGTGCAATGACTTCTTTCTCTTTCACCTTCTTTTTTG 235
Query 1121 CTATCGCCCCTGAGGATAAGCACAAAGGCGCTCATGGTATGGCCTTCGTGATCTCTCCCA 1180
|||||| ||||||| |||||||||||||| |||| ||||||||||||||||| ||||| |
Sbjct 236 CTATCGTCCCTGAGCATAAGCACAAAGGCTCTCACGGTATGGCCTTCGTGATTTCTCCTA 295
Query 1181 CAAGAGGCATTACTGGTGCCTCCGCTGATCAGTACCTTGGAATCTTTAACAAAGCAAACA 1240
||||||||||| | ||||| ||||| ||||||||||| |||||||| || ||| |||||
Sbjct 296 CAAGAGGCATTCCAGGTGCATCCGCAGATCAGTACCTCGGAATCTTCAATGAAGTAAACA 355
Query 1241 ACGGGGATAGCTCAAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGAGGAAT 1300
||||| | | ||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 356 ACGGGAACAACTCGAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGATGAAT 415
Query 1301 TTGGCGACATTAACGATAACCATGTTGGTATCAACATAAACGGAATGAGGTCTATCAAAT 1360
|||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 416 TTGGCGACATTAACGATAACCATGTTGGTATCAACATAAATGGGATGAGGTCTATTGTAT 475
Query 1361 TTGCTCCTGCTGGTTATTATGATCAAGAAGGTCAATTTA-AAGATCTTTCTTTGATAAGT 1419
||||||||||||||||||||||||||| |||||||| | || ||||||||||||| |||
Sbjct 476 CTGCTCCTGCTGGTTATTATGATCAAGAGGGTCAATTCAGAA-ATCTTTCTTTGATCAGT 534
Query 1420 GGAAGTCTACTCCGAGTCACGATTTTGTAT-AGCCAGATGGAA-AAACAGCTTAATGTCA 1477
|||| ||||||||||||||||||||||||| | ||||| | || ||| |||||| |||||
Sbjct 535 GGAAATCTACTCCGAGTCACGATTTTGTATGA-CCAGAAG-AAGAAAGAGCTTAGTGTCA 592
Query 1478 CCTTATCATCACCAGAGGAGGCTTATTACCCGAA-CAAGCCTCTTCTTTCATTGAACCAA 1536
| |||||||| |||||||| ||||||||||| || ||| || |||||||| | ||||||
Sbjct 593 CATTATCATCGCCAGAGGAAGCTTATTACCCCAAGCAA-CCACTTCTTTCGCTAAACCAA 651
Query 1537 GATCTATCACCCTATATTTTGGAGAACATGTATGTGGGCTTCTCAGCCTCAACGGGGTCT 1596
||||| ||||| ||| |||||||||| |||||||| |||||| ||||||| ||||||||
Sbjct 652 GATCTGTCACCGTATCTTTTGGAGAAAATGTATGTCGGCTTCACAGCCTCTACGGGGTCG 711
Query 1597 GTTAGAGCAATGCATTACATGTTGAGTTGGTTT-GTACATGGCGG-CGTTGAT-GTTCCA 1653
||| |||||||||| ||||||| || ||||| | | | || | | | ||| ||||||
Sbjct 712 GTTGGAGCAATGCACTACATGTCGATTTGGTATAG-ATATACCATAC-T-GATTGTTCCA 768
Query 1654 AACCTGGACT-T-GGGAATACCAACATTTCCTCCATATCCCAAGGAAAAATCTCTGGTTT 1711
||||||| | | |||| | || || ||||||||||| |||||||||||||| |||||
Sbjct 769 GACCTGGA-TATCGGGA-TCCCGACGTTTCCTCCATACCCCAAGGAAAAATCACTGGTAA 826
Query 1712 ATCGGATTGTTTTGGTGACCAGCTTGGCATTGGTTCTCTTTGTTGCGCTTGTTGCATCAG 1771
|||| ||| ||| ||||||| |||||||||||| |||||| |||||| | | ||||||||
Sbjct 827 ATCGCATTCTTTGGGTGACCGGCTTGGCATTGGCTCTCTTAGTTGCGATGGCTGCATCAG 886
Query 1772 CTTTAAGTATCTTTTTCTACAGGAGACATAAAAAGGTTAAAGAGGTTCTAGAGGAATGGG 1831
||| ||| |||| || || || | | | ||| |||| |||||||||||||||| ||||
Sbjct 887 GTTTTAGTCTCTTCTTATATAGAAAAAACCAAATGGTTCAAGAGGTTCTAGAGGAGTGGG 946
Query 1832 AGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAAAGGTT 1891
|||| ||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct 947 AGATTCAAAATGGACCTCATAGGTTTTCTTACAAAGAACTCTTTAAAGCCACAAATGGTT 1006
Query 1892 TCAAACAACTTCTAGGCAAAGGAGGGTTTGGTCAGGTCTTTAAGGGTACACTTCCAGGTT 1951
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1007 TCAAACAACTTCTAGGCAAAGGAGGGTTCGGTCAGGTCTTTAAGGGAACACTTCCAGGTT 1066
Query 1952 CTGATGCAGAGATTGCCGTTAAACGAATTTCACATGATTCAAAACAAGGAATGCAG-GAA 2010
| |||||| | ||||| |||||||| |||| |||| ||| | ||||||||| || |||
Sbjct 1067 CCGATGCAAATATTGCTGTTAAACGGGTTTCTCATGGTTCGAGTCAAGGAATG-AGAGAA 1125
Query 2011 TTCTTGGCTGAGATATCGACAATTGGTCGGCTTAGACACC-AGAACCTAGTCAGGCTTC 2068
|||||||| |||||| | || ||||||||||||||||||| | || ||||| |||||||
Sbjct 1126 TTCTTGGCCGAGATAGCAACTATTGGTCGGCTTAGACACCCA-AATCTAGTGAGGCTTC 1183
> Ahg902383 jgi|Araly1|902383|Al_scaffold_0004_3033
Length=1896
Score = 1166 bits (631), Expect = 0.0
Identities = 1028/1217 (84%), Gaps = 38/1217 (3%)
Strand=Plus/Plus
Query 945 TGAAAACTCCCGTGGCAAAC-TGGTTATGCAGGGATCCGCT-GGATTTTTTAAAGGTTAC 1002
||||||||| | ||||| | || || || |||||||| || ||| || |||| |||| |
Sbjct 54 TGAAAACTCACTTGGCAGGCTTGTTTTTG-AGGGATCCACTGGGA-TTATTAATGGTTTC 111
Query 1003 AGGACGTTGACGAGCACCAAGAAGCACG-CATATGGTCAAGCCTTCGAGGACGAGATAGT 1061
| |||||| | |||||||||||||| | ||||||||||||||||| |||||| | |
Sbjct 112 CCAATGTTGACAAACACCAAGAAGCACGTC-TATGGTCAAGCCTTCGATGACGAGCCATT 170
Query 1062 CCCTTTCAAGAATTCGGCCAACGAT-ACAGTTACTTC-TTTCTCTGTCACGTTCTTCTTT 1119
|||||||||||||||| |||||| | ||| | ||||| ||| ||| | || |||||||||
Sbjct 171 CCCTTTCAAGAATTCGACCAACGGTAACA-TGACTTCGTTT-TCTTTTACCTTCTTCTTT 228
Query 1120 GCTATCGCCCCTGAGG-ATA-AGCACAA-AGGCGCTCATGGTATGGCCTTCGTGATCTCT 1176
||||||| ||||| || ||| || | || |||| |||| ||||||||||||||||||||
Sbjct 229 GCTATCGTCCCTG-GGCATAGAG-A-AAGAGGCTCTCACGGTATGGCCTTCGTGATCTCG 285
Query 1177 CCCACAAGAGGCATTACTGGTGCCTCCGCTGATCAGTACCTTGGAATCTTTAAC-AAAGC 1235
|| ||||||||| || | ||||| | |||||||||||||| ||||| || ||| | | |
Sbjct 286 CCTACAAGAGGCCTTCCAGGTGCTTTTGCTGATCAGTACCTCGGAATATTCAACGATA-C 344
Query 1236 AAACAACGGGGATAGCTCAAATCATGTCATCGCTGTGGAGCTCGATATAAATAAAGATGA 1295
| |||| || | ||||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct 345 AGACAATGGAAAAAGCTCGAATCATGTCATTGCTGTGGAGCTCGATATACATAAAGATGA 404
Query 1296 GGAATTTGGCGACATTAACGATAACCATGTTGGTATCAACATAAACGGAATGAGGTCTAT 1355
|||||||| ||| |||| |||||||| |||||||| ||||| || |||||||| ||||
Sbjct 405 TGAATTTGGTGACGTTAATGATAACCACGTTGGTATTAACATTAATGGAATGAGATCTAA 464
Query 1356 CAAATTTGCTCCTGCTGGTTATTATGATCAAGAA-GGTCAATT-TAAAGATCTTTCTTTG 1413
|| || ||||||||| || |||| ||||||| || ||||| || |||| |||||| |
Sbjct 465 CATATCTGCTCCTGCCGGGTATTTTGATCAA-AAGGGTCAGTTCAAAAG-CCTTTCTCTA 522
Query 1414 ATAAGTGGAAGTCTACTCCGAGTCACGATTTTGTATAGCCA-GATGGAAAAACAGCTTAA 1472
|| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 523 ATCAGTGGAAATCTACTCCGAGTCACGATTTTGTATAGCCAGGA-AAAAAAACAGCTTAG 581
Query 1473 TGTCACCTTATCATCACCAGAGGAGGCTTATTACCCGAA-CAAGCCTCTTCT-TTCATTG 1530
|||||||||||||||||||||||||||||||||||||| | |||| ||||| || | ||
Sbjct 582 CGTCACCTTATCATCACCAGAGGAGGCTTATTACCCGAATC-AGCCACTTCTATT-ACTG 639
Query 1531 AACCAAGATCTATCACCCTATATT-TTGGAGAACATGTATGTGGGCTTCTCAGCCTCAAC 1589
||||||||||| ||||| ||| || |||||||| |||||| | |||| | | ||||| ||
Sbjct 640 AACCAAGATCTGTCACCGTAT-TTGTTGGAGAAAATGTATCTCGGCTACACTGCCTCCAC 698
Query 1590 GGGGTCTGTTAGAGCAATGCATTACATGTTGA-GTTGGTTTGTACATGGCGGCGTTGAT- 1647
|| || ||| ||||| | |||||||| | || ||| ||| ||| || || |
Sbjct 699 AGGTTCGGTTGGAGCATTACATTACATATGGACGTT-ACATGTGTATGATATCGCTG-TG 756
Query 1648 GTTCCAAACCTGGACTTGGGAATACCAACATTTCCTCCATATCCCAAGGAAAAATCTCTG 1707
|||||| | ||||| || ||||| || |||||||||||||||||| ||| |||| |
Sbjct 757 GTTCCAGATCTGGATTTCCCTATACCGACGTTTCCTCCATATCCCAAGCCAAAGTCTCAG 816
Query 1708 GTTTA-TCGGATTGTTTTGGTGACCAGCTTGGCATTGGTTCTCTTTGTTGCGCTTGTTGC 1766
| | | |||| ||| |||||||| ||||| ||||||| |||||||||||| ||| |||
Sbjct 817 G-TAAGACGGACTGTCTTGGTGACTTGCTTGACATTGGTCCTCTTTGTTGCGGTTGCTGC 875
Query 1767 ATCAGCTTTAAGTATCTTTTTCTACAGGAGACATAAAAAGGTTAAAGAGGTTCTAGAGGA 1826
||||||||||||| |||| ||||| || ||||||||||||||||| ||||||||||||||
Sbjct 876 ATCAGCTTTAAGTCTCTTCTTCTATAGAAGACATAAAAAGGTTAAGGAGGTTCTAGAGGA 935
Query 1827 ATGGGAGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAA 1886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 936 ATGGGAGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAA 995
Query 1887 AGGTTTCAAACAACTTCTAGGCAAAGGAGGGTTTGGTCAGGTCTTTAAGGGTACACTTCC 1946
||||||||||||||| | |||||||||||||| |||||||| |||||||||||||||||
Sbjct 996 GGGTTTCAAACAACTTGTGGGCAAAGGAGGGTTCGGTCAGGTTTTTAAGGGTACACTTCC 1055
Query 1947 AGGTTCTGATGCAGAGATTGCCGTTAAACGAATTTCACATGATTCAAAACAAGGAATGCA 2006
|||||| || ||||| ||||| |||||||| || || |||||||||| ||||||||||||
Sbjct 1056 AGGTTCAGACGCAGAAATTGCTGTTAAACGGATCTCTCATGATTCAAGACAAGGAATGCA 1115
Query 2007 GGAATTCTTGGCTGAGATATCGACAATTGGTCGGCTTAGACACC-AGAACCTAGTCAGGC 2065
||||||||| || ||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct 1116 GGAATTCTTAGCAGAGATATCGACAATTTGTCGGCTTAGACACCCA-AACCTAGTCAGGC 1174
Query 2066 TTCAGGGTTATTGTAGGTACAAGGAGGAACTCTACTTGGTTTATGACTTTATGCCCAATG 2125
|||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1175 TTCAGGGTTACTGTAGGTACAAGGAGGAGCTTTACTTGGTTTATGACTTTATGCCCAATG 1234
Query 2126 GAAGTCTTGACAAGTAC 2142
|||||||||||||||||
Sbjct 1235 GAAGTCTTGACAAGTAC 1251
Score = 593 bits (321), Expect = 2e-168
Identities = 531/630 (84%), Gaps = 24/630 (4%)
Strand=Plus/Plus
Query 2239 TGGGTACAAGTTGTAATTCATCGAGACATCAAGCCGGCAAATGTCCTGATTGACCACCAA 2298
||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||| ||
Sbjct 1285 TGGGTACAAGTCGTAATTCATCGAGATATCAAGCCTGCAAATGTCTTGATTGACCATCAG 1344
Query 2299 ATGAATGCAAGGCTCGGGGATTTTGGGTTGGCTAAGTTGTACGATCAGGGTTATGATCCT 2358
|||||||| || ||||||||||| ||| | || ||||||||| |||||||||||||||||
Sbjct 1345 ATGAATGCGAGACTCGGGGATTTCGGGCTAGCCAAGTTGTACTATCAGGGTTATGATCCT 1404
Query 2359 CAGACATCTAGAGTTGCTGGGACATTCT-GGTACATTGCACCGGAGCTCATAAGAAGCGG 2417
|| ||||| ||||| ||||| ||||| | |||||||||| || |||||||||||||| ||
Sbjct 1405 CAAACATCGAGAGTAGCTGGAACATT-TGGGTACATTGCCCCCGAGCTCATAAGAAGTGG 1463
Query 2418 AAGAGCAACCACAGGGACAGACGTCTATGCCTT-CGGGCTGTTTATGCTAGAAGTCTCTT 2476
||||||||||||||||||||||||||| ||||| ||| |||||||| || ||||||||||
Sbjct 1464 AAGAGCAACCACAGGGACAGACGTCTACGCCTTTCGG-CTGTTTATACTGGAAGTCTCTT 1522
Query 2477 GCGGTAGGAGGCTGATAGAGCGAAGAACAGCCTCCGACGAGGTCGTCCTAGCTGAATGGA 2536
||||||| ||||||||||||| | || ||||| || ||||||||||||| || |||||||
Sbjct 1523 GCGGTAGAAGGCTGATAGAGCCACGAGCAGCCACCAACGAGGTCGTCCTTGCAGAATGGA 1582
Query 2537 CATTA-AAGTGCTGGGAAAACGGAGATATTCTCGAGGCAGTCAATGATGGAATCCGTCAC 2595
||||| || |||||||||||||||||||| || |||||| |||||| || ||| ||
Sbjct 1583 CATTAGAA-TGCTGGGAAAACGGAGATATCCTTAAGGCAGCCAATGAAAGACTCCACCAA 1641
Query 2596 GAAGACAATAGAGAACAGCTCGAGCTTGTTTTGAAATTGGGAGTGTTGTGTTCGCACCAG 2655
||| |||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||||
Sbjct 1642 GAACACAATAGAGAACAGCTCGAGATTGTTCTGAAACTGGGAGTATTATGTTCGCACCAG 1701
Query 2656 GCTGTAGCAATTAGGCCAGACATGTCTAAGGTGGTCCAGATCTTGGGTGGTGAT-CTGCA 2714
| || | || ||||||| ||||||||||| ||||||| |||||| ||||||| | | |
Sbjct 1702 GTTGCAACAGTTAGGCCTGACATGTCTAAAGTGGTCCGGATCTTAAATGGTGATTC-GAA 1760
Query 2715 GCTTCC-AGATAATCTACTCGATATAGTCAAAGCAGAGAAGGTCAGAATGTGGTCTGAGA 2773
|||||| || |||| | || ||||| ||||| || |||| ||| ||||||||||||||||
Sbjct 1761 GCTTCCGAG-TAATTTGCTGGATATTGTCAAGGCCGAGAGGGTTAGAATGTGGTCTGAGA 1819
Query 2774 CATCTGAGAGTGTACTTGGTGTTTTGACATCACAAGG-GTCCATTGGTACCTTGACGTTA 2832
||||||| ||| | || ||||||| || |||||| ||||||||||| ||
Sbjct 1820 CATCTGATAGT--A-TTC---------CATCACA-GGAGTCCATCGGTACCTTGACATTT 1866
Query 2833 ACGGAACCTTTTACCTCCCGGGGACGCTGA 2862
||||||||||| || |||| |||||||||
Sbjct 1867 ACGGAACCTTTCACTTCCCACGGACGCTGA 1896
> Ahg333335 jgi|Araly1|333335|fgenesh1_pm.C_scaffold_462000001
Length=1734
Score = 706 bits (382), Expect = 0.0
Identities = 571/662 (86%), Gaps = 14/662 (2%)
Strand=Plus/Plus
Query 1474 GTCACCTTATCATCACCAGAGGAGGCTTATTACCCGAA-CAAGCCTCTTCT-TTCATTGA 1531
|||||||||||||||||||||||||||||||||||||| | |||| ||||| || | |||
Sbjct 397 GTCACCTTATCATCACCAGAGGAGGCTTATTACCCGAATC-AGCCACTTCTATT-ACTGA 454
Query 1532 ACCAAGATCTATCACCCTATATT-TTGGAGAACATGTATGTGGGCTTCTCAGCCTCAACG 1590
|||||||||| ||||| ||| || |||||||| |||||| | |||| | | ||||| ||
Sbjct 455 ACCAAGATCTGTCACCGTAT-TTGTTGGAGAAAATGTATCTCGGCTACACTGCCTCCACA 513
Query 1591 GGGTCTGTTAGAGCAATGCATTACATGTTGA-GTTGGTTTGTACATGGCGGCGTTGAT-G 1648
|| || ||| ||||| | |||||||| | || ||| ||| ||| || || | |
Sbjct 514 GGTTCGGTTGGAGCATTACATTACATATGGACGTT-ACATGTGTATGATATCGCTG-TGG 571
Query 1649 TTCCAAACCTGGACTTGGGAATACCAACATTTCCTCCATATCCCAAGGAAAAATCTCTGG 1708
|||| | ||||| || ||||| || |||||||||||||||||| ||| |||| ||
Sbjct 572 ATCCAGATCTGGATTTCCCTATACCGACGTTTCCTCCATATCCCAAGCCAAAGTCTCAGG 631
Query 1709 TTTA-TCGGATTGTTTTGGTGACCAGCTTGGCATTGGTTCTCTTTGTTGCGCTTGTTGCA 1767
| | |||| ||| |||||||| ||||| ||||||| |||||||||||| ||| ||||
Sbjct 632 -TAAGACGGACTGTCTTGGTGACTTGCTTGACATTGGTCCTCTTTGTTGCGGTTGCTGCA 690
Query 1768 TCAGCTTTAAGTATCTTTTTCTACAGGAGACATAAAAAGGTTAAAGAGGTTCTAGAGGAA 1827
|||||||||||| |||| ||||| || ||||||||||||||||| |||||||||||||||
Sbjct 691 TCAGCTTTAAGTCTCTTCTTCTATAGAAGACATAAAAAGGTTAAGGAGGTTCTAGAGGAA 750
Query 1828 TGGGAGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAAA 1887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 TGGGAGATCCAATGTGGGCCTCATAGGTTTGCTTACAAAGAACTCTTTAAAGCCACAAAG 810
Query 1888 GGTTTCAAACAACTTCTAGGCAAAGGAGGGTTTGGTCAGGTCTTTAAGGGTACACTTCCA 1947
||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||
Sbjct 811 GGTTTCAAACAACTTGTGGGCAAAGGAGGGTTCGGTCAGGTTTTTAAGGGTACACTTCCA 870
Query 1948 GGTTCTGATGCAGAGATTGCCGTTAAACGAATTTCACATGATTCAAAACAAGGAATGCAG 2007
||||| || ||||| ||||| |||||||| || || |||||||||| |||||||||||||
Sbjct 871 GGTTCAGACGCAGAAATTGCTGTTAAACGGATCTCTCATGATTCAAGACAAGGAATGCAG 930
Query 2008 GAATTCTTGGCTGAGATATCGACAATTGGTCGGCTTAGACACC-AGAACCTAGTCAGGCT 2066
|||||||| || ||||||||||||||| ||||||||||||||| | ||||||||||||||
Sbjct 931 GAATTCTTAGCAGAGATATCGACAATTTGTCGGCTTAGACACCCA-AACCTAGTCAGGCT 989
Query 2067 TCAGGGTTATTGTAGGTACAAGGAGGAACTCTACTTGGTTTATGACTTTATGCCCAATGG 2126
||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 990 TCAGGGTTACTGTAGGTACAAGGAGGAGCTTTACTTGGTTTATGACTTTATGCCCAATGG 1049
Query 2127 AA 2128
||
Sbjct 1050 AA 1051
Score = 669 bits (362), Expect = 0.0
Identities = 593/702 (84%), Gaps = 25/702 (4%)
Strand=Plus/Plus
Query 2167 CAACTCACTTGGAATCAACGTTTCAAGATCATCAAAGACATAGCCTCTGCACTCTGCTAT 2226
|||||||||||| | ||||||||||||||||||||||| ||||||||| |||||| |||
Sbjct 1052 CAACTCACTTGGGA-CAACGTTTCAAGATCATCAAAGATGTAGCCTCTGGACTCTGTTAT 1110
Query 2227 TTGCATCATGAATGGGTACAAGTTGTAATTCATCGAGACATCAAGCCGGCAAATGTCCTG 2286
||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| ||
Sbjct 1111 CTGCATCACGAGTGGGTACAAGTCGTAATTCATCGAGATATCAAGCCTGCAAATGTCTTG 1170
Query 2287 ATTGACCACCAAATGAATGCAAGGCTCGGGGATTTTGGGTTGGCTAAGTTGTACGATCAG 2346
|||||||| || |||||||| || ||||||||||| ||| | || ||||||||| |||||
Sbjct 1171 ATTGACCATCAGATGAATGCGAGACTCGGGGATTTCGGGCTAGCCAAGTTGTACTATCAG 1230
Query 2347 GGTTATGATCCTCAGACATCTAGAGTTGCTGGGACATTCT-GGTACATTGCACCGGAGCT 2405
|||||||||||||| ||||| ||||| ||||| ||||| | |||||||||| || |||||
Sbjct 1231 GGTTATGATCCTCAAACATCGAGAGTAGCTGGAACATT-TGGGTACATTGCCCCCGAGCT 1289
Query 2406 CATAAGAAGCGGAAGAGCAACCACAGGGACAGACGTCTATGCCTT-CGGGCTGTTTATGC 2464
||||||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||| |
Sbjct 1290 CATAAGAAGTGGAAGAGCAACCACAGGGACAGACGTCTACGCCTTTCGG-CTGTTTATAC 1348
Query 2465 TAGAAGTCTCTTGCGGTAGGAGGCTGATAGAGCGAAGAACAGCCTCCGACGAGGTCGTCC 2524
| ||||||||||||||||| ||||||||||||| | || ||||| || ||||||||||||
Sbjct 1349 TGGAAGTCTCTTGCGGTAGAAGGCTGATAGAGCCACGAGCAGCCACCAACGAGGTCGTCC 1408
Query 2525 TAGCTGAATGGACATTA-AAGTGCTGGGAAAACGGAGATATTCTCGAGGCAGTCAATGAT 2583
| || |||||||||||| || |||||||||||||||||||| || |||||| ||||||
Sbjct 1409 TTGCAGAATGGACATTAGAA-TGCTGGGAAAACGGAGATATCCTTAAGGCAGCCAATGAA 1467
Query 2584 GGAATCCGTCACGAAGACAATAGAGAACAGCTCGAGCTTGTTTTGAAATTGGGAGTGTTG 2643
|| ||| || ||| |||||||||||||||||||| ||||| ||||| ||||||| ||
Sbjct 1468 AGACTCCACCAAGAACACAATAGAGAACAGCTCGAGATTGTTCTGAAACTGGGAGTATTA 1527
Query 2644 TGTTCGCACCAGGCTGTAGCAATTAGGCCAGACATGTCTAAGGTGGTCCAGATCTTGGGT 2703
||||||||||||| || | || ||||||| ||||||||||| ||||||| ||||||
Sbjct 1528 TGTTCGCACCAGGTTGCAACAGTTAGGCCTGACATGTCTAAAGTGGTCCGGATCTTAAAC 1587
Query 2704 GGTGAT-CTGCAGCTTCC-AGATAATCTACTCGATATAGTCAAAGCAGAGAAGGTCAGAA 2761
|||||| | | ||||||| || |||| | || ||||| ||||| || |||| ||| ||||
Sbjct 1588 GGTGATTC-GAAGCTTCCGAG-TAATTTGCTGGATATTGTCAAGGCCGAGAGGGTTAGAA 1645
Query 2762 TGTGGTCTGAGACATCTGAGAGTGTACTTGGTGTTTTGACATCACAAGG-GTCCATTGGT 2820
||||||||||||||||||| ||| | || ||||||| || |||||| |||
Sbjct 1646 TGTGGTCTGAGACATCTGATAGT--A-TTC---------CATCACA-GGAGTCCATCGGT 1692
Query 2821 ACCTTGACGTTAACGGAACCTTTTACCTCCCGGGGACGCTGA 2862
|||||||| || ||||||||||| || |||| |||||||||
Sbjct 1693 ACCTTGACATTTACGGAACCTTTCACTTCCCACGGACGCTGA 1734
> Ahg914486 jgi|Araly1|914486|Al_scaffold_0001_4740
Length=729
Score = 63.9 bits (34), Expect = 7e-09
Identities = 36/37 (97%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 1301 TTGGCGACATTAACGATAACCATGTTGGTATCAACAT 1337
|||||||||||||||||||||||||||| ||||||||
Sbjct 371 TTGGCGACATTAACGATAACCATGTTGGAATCAACAT 407
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121165069345
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5