BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G43900.1
Length=4212
Score E
Sequences producing significant alignments: (Bits) Value
Ahg322057 jgi|Araly1|322057|fgenesh1_pm.C_scaffold_4002114 6010 0.0
Ahg470566 jgi|Araly1|470566|fgenesh2_kg.1__520__AT1G05630.1 793 0.0
> Ahg322057 jgi|Araly1|322057|fgenesh1_pm.C_scaffold_4002114
Length=3849
Score = 6010 bits (3254), Expect = 0.0
Identities = 3603/3771 (96%), Gaps = 26/3771 (1%)
Strand=Plus/Plus
Query 49 ATGGATATCATCAACAA-CA--ACCACCG-T--GACGAAAACGAT---GACGACGAAGAA 99
|||||||||| |||||| || ||||||| | || ||| ||||| |||||||| ||
Sbjct 1 ATGGATATCAACAACAACCACCACCACCGTTCCGAAGAAGACGATAACGACGACGACGAC 60
Query 100 GAAGCTCTCTCCGCCATGAGCTCTGTTCCTCCTCCTCGAAAAATCCATTCCTATAGCCAC 159
|| |||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||
Sbjct 61 GACGCTCTCTCCGCCATGAGCTCCGTCCCTCCACCTCGCAAAATCCATTCCTATAGCCAT 120
Query 160 CAGCTTCGTGCCACCGGTCAAAAAGG---TCACCACCGTCAACGTCAACACAGCCTCGAC 216
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 121 CAGCTTCGTGCCACCGGTCAAAAAGGTCATCACCACCGTCAACGTCAACACAGCCTCGAC 180
Query 217 GACATTCCTAAAATCACTGAAATCGTCTCCGGTTGTGGTATCTCCGGCGATTCTTCCGAT 276
|| || |||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 181 GATATCCCTAAAATCACTGAAATCATCTCTGGTTGTGGTATCTCCGGCGATTCTTCCGAT 240
Query 277 GACGAGTTCTATCCTTACGCCACCACCACCAATTCCTCATCTTTCCCTTTCACCGGAGGA 336
||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||
Sbjct 241 GACGAGTTCTATCCTTACGCCACCACCACAAATTCCTCGTCTTTTCCTTTCACC---GGA 297
Query 337 GATACAGGAGATTCTGATGATTACTTGCACCAGCCTGAGATCGGAGAAGATTTTCAACCT 396
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 GATACAGGAGATACTGATGATTACTTGCACCAGCCTGAGATCGGAGAAGATTTTCAACCG 357
Query 397 CTTCCTGAATTCGTCGGATCCGGAGGCGGTGTTGGGATGTTTAAAGTCCCGACGCGGTCT 456
|||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||
Sbjct 358 CTTCCTGAATTCGTCGGATCTGGAGGCGGCGTTGGCATGTTTAAAGTCCCGACGCGGTCT 417
Query 457 CCTTTGCACTCGGCGCGTCCTCCTTGTTTAGAGTTGAGACCACATCCGTTGAAGGAGACT 516
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 CCTTTGCACTCAGCGCGTCCTCCTTGTTTAGAGTTGAGACCACATCCGTTGAAGGAGACT 477
Query 517 CAGGTTGGGAGATTCTTGAGGAACATTGCTTGTACGGAGACGCAATTGTGGGCTGGACAA 576
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 478 CAGGTTGGGAGATTCTTGAGGAACATTGCTTGTACGGGGACGCAATTGTGGGCTGGACAA 537
Query 577 GAGAGTGGTGTTAGATTCTGGAACTTTGATGATGCCTTTGAGCCAGGTTGTGGTTTAAGC 636
|||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct 538 GAGAGTGGTGTTTGATTTTGGAACTTTGATGATGCGTTTGAGCCTGGTTGTGGTTTAAGC 597
Query 637 GGCCGTGTACAGAGAGGTGATGAGGATGCTGCACCGTTTCAAGAGTCGGCTAGTACTTCT 696
|| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 598 GGTCGTGTACAAAGAGGTGATGAGGATGCTGCACCGTTTCATGAGTCGGCTAGTACTTCA 657
Query 697 CCCACCACTTGTTTGATGGTTGATAATGGGAATAGGCTTGTTTGGAGTGGTCATAAAGAT 756
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 658 CCCACCACTTGTTTGATGGTTGATAATGGGAATAGGCTTGTTTGGAGTGGTCACAAGGAT 717
Query 757 GGAAAGATTCGGTCTTGGAAGATGGATTATGTGCTTGATGATGGTGATGATTCTCCTTTC 816
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 718 GGAAAGATTCGGTCTTGGAAGATGGATTATGTGGTTGATGATGGTGATGATTCTCCTTTC 777
Query 817 AAGGAAGGTCTAGCTTGGCAAGCTCATAAGGGTCCTGTCAATTCCGTAATCATGAGTTCT 876
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 778 AAGGAAGGTCTCGCTTGGCAAGCTCACAAGGGTCCTGTCAATTCCGTAATCATGAGTTCT 837
Query 877 TATGGCGATTTGTGGTCATGTTCAGAAGGTGGTGTGATAAAGATATGGACTTGGGAATCT 936
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 TATGGTGATTTGTGGTCATGTTCAGAAGGTGGTGTGATAAAGATATGGACTTGGGAATCT 897
Query 937 ATGGAGAAATCTCTTTCGCTTAGGTTGGAGGAGAAGCATATGGCTGCTTTGTTGGTGGAA 996
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 898 ATGGAGAAATCTCTTTCGCTTAGGTTGGAGGAGAAACATATGGCTGCTTTGTTGGTGGAA 957
Query 997 AGGTCAGGGATTGATCTCAGGGCTCAAGTTACTGTCAACGGGACTTGCAATATATCTTCC 1056
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 958 AGGTCAGGGATTGATCTCAGGGCTCAAGTTACTGTCAACGGAACTTGCAATATATCTTCC 1017
Query 1057 TCTGAAGTCAAGTGTTTGTTAGCTGATAATGTAAGATCCAAAGTTTGGGCTGCTCAGCTT 1116
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1018 TCTGAAGTCAAGTGTTTGTTAGCTGATAATGTAAGATCTAAAGTTTGGGCTGCTCAACTT 1077
Query 1117 CAAACCTTCTCCTTGTGGGATGGTCGTACAAAAGAGTTACTGAAAGTGTTCAACTCAGAA 1176
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 CAAACCTTCTCCTTGTGGGATGGTCGTACAAAAGAGTTACTGAAAGTGTTCAACTCAGAC 1137
Query 1177 GGTCAGACTGAAAACAGGGTTGACATGCCATTGGGGCAGGATCAGCCTGCTGCTGAAGAT 1236
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||
Sbjct 1138 GGTCAGACTGAAAACAGGGTTGAAATGCCATTGGGGCAGGATCAG-C--CTGCTGAAGAT 1194
Query 1237 GAGATGAAGGCCAAAATTGCTTCCACTTCGAAGAAGGAGAAACCGCATGGATTCTTGCAA 1296
||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1195 GAGATGAAGGCGAAAATAGCTTCTACTTCGAAAAAGGAGAAACCGCATGGATTCTTGCAA 1254
Query 1297 CGCTCAAGGAATGCTATAATGGGAGCTGCGGATGCTGTTAGAAGGGTTGCAACAAGAGGA 1356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 CGCTCAAGGAATGCTATAATGGGAGCTGCGGATGCTGTTAGAAGGGTTGCAACAAGAGGA 1314
Query 1357 GGAGGGGCTTATGAAGATGCCAAAAGAACAGAAGCCATGGTTTTAGCCGGGGATGGCATG 1416
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 GGAGGGGCATATGAAGATGCCAAAAGAACAGAAGCCATGGTTTTAGCCGGGGATGGCATG 1374
Query 1417 ATTTGGACCGGCTGCACAAATGGATTGCTTATACAATGGGACGGAAATGGAAACCGGTTG 1476
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 ATTTGGACCGGGTGCACAAATGGATTGCTTATACAATGGGACGGAAATGGAAACCGGTTG 1434
Query 1477 CAAGATTTCCGTCACCATCAATGTGCTGTACTGTGTTTCTGCACGTTCGGGGAAAGGATA 1536
|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||
Sbjct 1435 CAAGATTTCCGTCACCATCAATGTGCTGTATTGTGTTTCTGCACTTTCGGGGAAAGAATA 1494
Query 1537 TACATTGGTTATGTTAGTGGTCACATCCAGATAATTGATCTCGAAGGTAATCTAATCGCG 1596
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1495 TACATTGGTTATGTTAGTGGTCACATCCAGATAATTGATCTCGAAGGCAATCTAATCGCG 1554
Query 1597 GGATGGGTTGCACATAATAACGCAGTGATTAAGATGGCAGCAGCCGATGGCTACATTTTC 1656
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1555 GGATGGGTTGCACATAATAACGCAGTGATTAAGATGGCAGCAGCCGATGGCTATATTTTC 1614
Query 1657 AGCTTAGCCACTCATGGTGGTATACGTGGATGGCCTGTGATTTCTCCTGGGCCTCTTGAC 1716
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1615 AGCTTAGCTACTCATGGTGGTATACGTGGATGGCATGTGATTTCTCCTGGGCCTCTTGAC 1674
Query 1717 GGGATAATAAGGTCGGAACTGGCTGAAAAAGAACGGACATATGCTCAGACAGACAGTGTT 1776
||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct 1675 GGGATAATAAGGTCGGAACTGGCTGAAAAAGAACGGACATACGCACAGACGGACAGTGTT 1734
Query 1777 AGGATTCTGACTGGTTCATGGAATGTTGGCCAGGGAAAAGCTTCCCATGATGCGCTTATG 1836
|||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 1735 AGGATTCTGATTGGTTCATGGAATGTTGGCCAAGGAAAAGCTTCCCATGATGCACTTATG 1794
Query 1837 TCTTGGTTAGGCTCTGTAGCATCAGATGTTGGTATTCTTGTCGTAGGCTTGCAAGAAGTA 1896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1795 TCTTGGTTAGGCTCTGTAGCATCAGATGTTGGTATTCTTGTCGTAGGCTTGCAAGAAGTA 1854
Query 1897 GAGATGGGTGCTGGGTTTTTGGCAATGTCAGCTGCTAAAGAATCGGTAGGAGGAAACGAA 1956
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1855 GAGATGGGTGCTGGGTTTTTGGCAATGTCAGCTGCTAAAGAATCGGTAGGAGGAAATGAA 1914
Query 1957 GGGAGTACGATAGGGCAGTACTGGATAGACACAATAGGGAAAACCTTAGACGAAAAAGCA 2016
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1915 GGTAGTACGATAGGGCAGTACTGGATAGACACAATAGGGAAGACCTTAGACGAAAAAGCA 1974
Query 2017 GTGTTTGAACGCATGGGATCAAGGCAGTTAGCTGGTTTGCTCATTTCACTTTGGGTGAGG 2076
|| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1975 GTTTTTGAACGCATGGGATCGAGGCAATTAGCTGGTTTGCTCATTTCACTTTGGGTGAGG 2034
Query 2077 AAGAATCTGAGAACCCATGTAGGCGATATTGATGTTGCAGCAGTTCCATGTGGTTTTGGA 2136
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2035 AAGAATCTGAGAACCCATGTAGGGGATATTGATGTTGCAGCAGTTCCATGTGGTTTTGGA 2094
Query 2137 CGCGCAATAGGAAACAAGGGAGGTGTAGGTTTGAGAATTAGGGTCTTTGATCGGATTATG 2196
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2095 CGCGCAATAGGAAACAAGGGAGGTGTAGGTTTGAGGATTAGGGTCTTTGATCGGATTATG 2154
Query 2197 TGCTTCATCAACTGTCACTTGGCTGCTCATCTAGAAGCTGTAAACCGCAGAAATGCTGAT 2256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2155 TGCTTCATCAACTGTCACTTGGCTGCTCATCTAGAAGCTGTAAACCGCAGAAATGCTGAT 2214
Query 2257 TTTGATCACATATACAAAACAATGTCCTTTACCCGGTCATCAAATGCTCATAATGCACCA 2316
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2215 TTTGATCACATATACAAAACAATGTCCTTTACCCGGTCATCAAATGCTCATAATGCCCCA 2274
Query 2317 GCCGCTGGTGTGTCTACCGGTTCTCATACCACAAAGAGCGCAAATAATGCAAACGTTAAC 2376
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2275 GCCGCTGGTGTGTCTACCGGTTCTCATACCACAAAGAGCGCAAATAATGCAAACGTAAAC 2334
Query 2377 ACAGAAGAGACAAAACAGGACCTAGCTGAGGCGGACATGGTTGTATTTTTTGGTGATTTC 2436
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2335 ACAGAAGAGACAAAACAGGACCTAGCAGAGGCGGACATGGTTGTATTTTTTGGTGATTTC 2394
Query 2437 AACTACCGCCTCTTTGGTATATCATATGATGAAGCTAGGGACTTTGTCTCACAAAGAAGC 2496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2395 AACTACCGCCTCTTTGGTATATCATATGATGAAGCTAGGGACTTTGTCTCACAAAGAAGC 2454
Query 2497 TTCGATTGGCTTAGAGAAAAAGATCAGCTCAGGGCAGAGATGAAAGCTGGAAGAGTATTC 2556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2455 TTCGATTGGCTTAGAGAAAAAGATCAGCTCAGGGCAGAGATGAAAGCTGGAAGAGTATTC 2514
Query 2557 CAAGGAATGCGTGAAGCCATCATTACATTCCCTCCAACTTATAAGTTTGAAAGACACCGG 2616
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 2515 CAAGGAATGCGTGAAGCCATCATTACTTTCCCTCCAACTTATAAGTTTGAAAGACATCGG 2574
Query 2617 CCTGGCTTAGGAGGGTACGATTCGGGTGAGAAAAAGCGGATTCCTGCATGGTGTGACAGA 2676
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2575 CCTGGATTAGGAGGGTACGATTCGGGTGAGAAAAAGCGGATTCCTGCATGGTGTGACAGA 2634
Query 2677 GTAATATTCAGAGACACGCGTACGAGTCCAGAATCTGAGTGCAGTTTAGACTGTCCTGTT 2736
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2635 GTAATATTCAGAGACACGCGTACGAGTCCAGAATCTGAATGCAGTTTAGACTGTCCTGTT 2694
Query 2737 GTTGCTTCGATTATGTTGTATGATGCTTGTATGGATGTGACAGAGAGTGATCACAAACCG 2796
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2695 GTTGCTTCAATTATGTTGTATGATGCTTGTATGGATGTGACAGAGAGTGATCACAAACCG 2754
Query 2797 GTCCGTTGCAAATTCCATGTCAAGATTGAGCATGTTGATAGATCGGTAAGGAGACAAGAG 2856
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 2755 GTCCGTTGCAAATTCCATGTGAAGATAGAGCATGTTGATAGATCGGTAAGGAGACAAGAG 2814
Query 2857 TTTGGGAGAATCATCAAGACCAACGAGAAAGTCAGAGCGTTGCTCAACGACCTACGTTAT 2916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2815 TTTGGGAGAATCATCAAGACCAACGAGAAAGTCAGAGCGTTGCTCAACGACCTACGTTAT 2874
Query 2917 GTACCAGAGACAATTGTCAGCAGCAACAGCATCGTTCTCCAGAACCAAGACACCTTCGTG 2976
|||||||||||| |||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct 2875 GTACCAGAGACAGTTGTTAGTAGCAACAGTATCGTTCTCCAGAACCAAGACACCTTCGTG 2934
Query 2977 CTTCGCATCACCAACAAATGCGTCAAGGAAAACGCTGTGTTCAGGATCTTGTGCGAAGGG 3036
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 2935 CTTCGCATCACCAACAAATGTGTCAAGGAGAACGCTGTGTTCAGGATCTTGTGCGAAGGG 2994
Query 3037 CAGAGTACAGTGAGAGAAGACGAAGACACACTTGAGTTACATCCGTTAGGATCATTCGGT 3096
|||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||
Sbjct 2995 CAGAGTACAGTGAGAGAAGACGAAGACACACTCGAGTTACATTCGTTAGGCTCATTCGGT 3054
Query 3097 TTCCCACGGTGGCTCGAGGTAATGCCAGCTGCAGGAACTATAAAACCGGATAGTTCAGTG 3156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3055 TTCCCACGGTGGCTCGAGGTAATGCCAGCTGCAGGAACTATAAAACCGGATAGTTCAGTG 3114
Query 3157 GAGGTATCGGTTCACCATGAGGAGTTCCATACATTAGAAGAGTTTGTAGATGGGATTCCT 3216
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 3115 GAGGTATCGGTTCACCATGAGGAGTTCCATACATTAGAAGAGTTTGTAGATGGAATTCCT 3174
Query 3217 CAGAATTGGTGGTGTGAGGACACACGGGATAAAGAAGCAATACTTGTGGTGAATGTACAA 3276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3175 CAGAATTGGTGGTGTGAGGACACACGGGATAAAGAAGCAATACTTGTGGTGAATGTACAA 3234
Query 3277 GGAGGTTGTTCGACTGAGACTGTGTGCCACCGGGTCCATGTTCGGCACTGCTTCTCGGCT 3336
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3235 GGAGGTTGTTCGACTGAGACTGTGTGCCACCGGGTCCATGTTCGTCACTGCTTCTCGGCT 3294
Query 3337 AAAAATCTTAGGATCGACTCCAATCCATCTAACTCCAAATCTCAGAGTTTGAAGAAGAAC 3396
||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 3295 AAAGCTCTTAGGATCGACTCCAATCCATCTAACTCTAAATCCCAGAGTTTGAAGAAGAAT 3354
Query 3397 GAAGGAGATTCCAA--CTCAAAGTCTTCGAAGAAGAGCGATGGAGATTCTAACTCCAAGT 3454
|||||||| || || |||| ||| | ||||||| ||| ||||||||| ||||||||
Sbjct 3355 GAAGGAGACTCTAAATCTCAGAGTAGT--AAGAAGAACGAAGGAGATTCTGGCTCCAAGT 3412
Query 3455 CCTCG-AAGAAGAGCGATGGGGATTCTAACTCCAAGTCTTCGAAGAAGAGCGATGGGGAT 3513
| || |||||||||||||| ||||| ||||| |||| |||||||||||||||||| ||
Sbjct 3413 C-TCATAAGAAGAGCGATGGAGATTCCAACTCAAAGTTTTCGAAGAAGAGCGATGGAGAC 3471
Query 3514 TCCAACTCCAAGTCTTCGAAGAAGAGCGACGGGGATTCCAACTCCAAGTCTTCGAAGAAG 3573
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 3472 TCCAACTCCAAGTCTTCGAAGAAGAGCGATGGGGATTCTAACTCCAAGTCTTCGAAGAAG 3531
Query 3574 AGCGATGGGGATTCCAACTCCAAGTCTTCGAAGAAGAGCGATGGAGACTCCAACTCCAAG 3633
|||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||
Sbjct 3532 AGCGATGGGGATTCTAACTCGAAGTCTTCGAAGAAGAGTGATGGAGACTCCTGCTCCAAG 3591
Query 3634 TCTTC-GAAGAAGAGTGATGGAGACTCCTGCTCCAAGTCACAGAAGAAGAGCGATGGAGA 3692
|| | ||||||||| ||||||||| || ||||||||| ||||||||| ||||||||||
Sbjct 3592 TCA-CAGAAGAAGAGCGATGGAGACACCAACTCCAAGTCTCAGAAGAAGGGCGATGGAGA 3650
Query 3693 CACCAACTCCAAGTCTCAGAAGAAGGGCGATGGAGATTCGAGCTCCAAGTCTCACAAGAA 3752
| | |||||||||||| |||||| |||||||||||||||||| ||||||||||||||
Sbjct 3651 TTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTCGAGCTCTAAGTCTCACAAGAA 3710
Query 3753 GAACGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTC 3803
|| ||||||||| || || || |||||||| ||||||||||||||||||||
Sbjct 3711 GAGCGATGGAGACTCCAGTTCTAAGTCTCAGAAGAAGAACGATGGAGATTC 3761
Score = 571 bits (309), Expect = 1e-161
Identities = 419/472 (89%), Gaps = 8/472 (2%)
Strand=Plus/Plus
Query 3532 AAGAAGAGCGACGGGGATTCCAACTCCAAGTCTTC-GAAGAAGAGCGATGGGGATTCCAA 3590
||||||| ||| || ||||| ||||||||| || |||||||||||||| ||||||||
Sbjct 3382 AAGAAGAACGAAGGAGATTCTGGCTCCAAGTC-TCATAAGAAGAGCGATGGAGATTCCAA 3440
Query 3591 CTCCAAGTCTTCGAAGAAGAGCGATGGAGACTCCAACTCCAAGTCTTCGAAGAAGAGTGA 3650
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3441 CTCAAAGTTTTCGAAGAAGAGCGATGGAGACTCCAACTCCAAGTCTTCGAAGAAGAGCGA 3500
Query 3651 TGGAGACTCCT-GCTCCAAGTC-ACAGAAGAAGAGCGATGGAGACACCAACTCCAAGTC- 3707
||| || | || ||||||||| | ||||||||||||||| || | ||||| |||||
Sbjct 3501 TGGGGA-TTCTAACTCCAAGTCTTC-GAAGAAGAGCGATGGGGATTCTAACTCGAAGTCT 3558
Query 3708 TCAGAAGAAGGGCGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTC 3767
|| ||||||| | |||||||| || |||||||||| || ||||||| ||||||||| |
Sbjct 3559 TC-GAAGAAGAGTGATGGAGACTCCTGCTCCAAGTCACAGAAGAAGAGCGATGGAGACAC 3617
Query 3768 GAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTCAAGCTCTAAGTCTCACAAGAAGAG 3827
| |||||||||||| |||||| |||||||||||| ||||| ||||||||||||||||
Sbjct 3618 CAACTCCAAGTCTCAGAAGAAGGGCGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAA 3677
Query 3828 CGATGGAGATTCGAGCTCTAAGTCTCACAAGAAGAGCGAAGGAGACTCCAGTTCTAAGTC 3887
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3678 CGATGGAGATTCGAGCTCTAAGTCTCACAAGAAGAGCGATGGAGACTCCAGTTCTAAGTC 3737
Query 3888 TCACAAGAAGAACGATGGAGATTCTTCAAGCTCATACAAGTCGCAGAGTGGGAAGAAAAA 3947
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3738 TCAGAAGAAGAACGATGGAGATTCTTCAAGCTCATACAAGTCGCAGAGTGGGAAGAAAAA 3797
Query 3948 CAGTAACTCGTCAACTGTAGAGGAGAGCCGGAATAACCACAACAAACGTTGA 3999
||||||||||||||| | |||||||||||||||| ||| ||||||||||||
Sbjct 3798 CAGTAACTCGTCAACCGGAGAGGAGAGCCGGAATGGCCATAACAAACGTTGA 3849
Score = 566 bits (306), Expect = 6e-160
Identities = 383/420 (91%), Gaps = 6/420 (1%)
Strand=Plus/Plus
Query 3423 GAAGAAGAGCGATGGAGATTCTAACTC-CA-AGTCCTCGAAGAAGAGCGATGGGGATTCT 3480
|||||||| || ||||| ||||| || || ||| | ||||||| ||| || ||||||
Sbjct 3345 GAAGAAGAATGAAGGAGACTCTAAATCTCAGAGTAGT--AAGAAGAACGAAGGAGATTCT 3402
Query 3481 AACTCCAAGTCTTC-GAAGAAGAGCGATGGGGATTCCAACTCCAAGTCTTCGAAGAAGAG 3539
||||||||| || |||||||||||||| ||||||||||| |||| ||||||||||||
Sbjct 3403 GGCTCCAAGTC-TCATAAGAAGAGCGATGGAGATTCCAACTCAAAGTTTTCGAAGAAGAG 3461
Query 3540 CGACGGGGATTCCAACTCCAAGTCTTCGAAGAAGAGCGATGGGGATTCCAACTCCAAGTC 3599
||| || || |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3462 CGATGGAGACTCCAACTCCAAGTCTTCGAAGAAGAGCGATGGGGATTCTAACTCCAAGTC 3521
Query 3600 TTCGAAGAAGAGCGATGGAGACTCCAACTCCAAGTCTTCGAAGAAGAGTGATGGAGACTC 3659
|||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||
Sbjct 3522 TTCGAAGAAGAGCGATGGGGATTCTAACTCGAAGTCTTCGAAGAAGAGTGATGGAGACTC 3581
Query 3660 CTGCTCCAAGTCACAGAAGAAGAGCGATGGAGACACCAACTCCAAGTCTCAGAAGAAGGG 3719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3582 CTGCTCCAAGTCACAGAAGAAGAGCGATGGAGACACCAACTCCAAGTCTCAGAAGAAGGG 3641
Query 3720 CGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTCGAGCTCCAAGTC 3779
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3642 CGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTCGAGCTCTAAGTC 3701
Query 3780 TCACAAGAAGAACGATGGAGATTCAAGCTCTAAGTCTCACAAGAAGAGCGATGGAGATTC 3839
||||||||||| ||||||||| || || ||||||||||| ||||||| ||||||||||||
Sbjct 3702 TCACAAGAAGAGCGATGGAGACTCCAGTTCTAAGTCTCAGAAGAAGAACGATGGAGATTC 3761
Score = 446 bits (241), Expect = 8e-124
Identities = 351/404 (87%), Gaps = 8/404 (2%)
Strand=Plus/Plus
Query 3368 ACTCCAAATCTCAGAGTTTG-AAGAAGAACGAAGGAGATTCCAACTCAAAGTCTTC-GAA 3425
|||| ||||||||||| | | |||||||||||||||||||| ||| ||||| || ||
Sbjct 3362 ACTCTAAATCTCAGAG-TAGTAAGAAGAACGAAGGAGATTCTGGCTCCAAGTC-TCATAA 3419
Query 3426 GAAGAGCGATGGAGATTCTAACTCCAAGTCCTCGAAGAAGAGCGATGGGGATTCTAACTC 3485
|||||||||||||||||| ||||| |||| ||||||||||||||||| || || |||||
Sbjct 3420 GAAGAGCGATGGAGATTCCAACTCAAAGTTTTCGAAGAAGAGCGATGGAGACTCCAACTC 3479
Query 3486 CAAGTCTTCGAAGAAGAGCGATGGGGATTCCAACTCCAAGTCTTCGAAGAAGAGCGACGG 3545
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 3480 CAAGTCTTCGAAGAAGAGCGATGGGGATTCTAACTCCAAGTCTTCGAAGAAGAGCGATGG 3539
Query 3546 GGATTCCAACTCCAAGTCTTCGAAGAAGAGCGATGGGGATTCCAACTCCAAGTCTTC-GA 3604
|||||| ||||| ||||||||||||||||| ||||| || ||| ||||||||| | ||
Sbjct 3540 GGATTCTAACTCGAAGTCTTCGAAGAAGAGTGATGGAGACTCCTGCTCCAAGTCA-CAGA 3598
Query 3605 AGAAGAGCGATGGAGACTCCAACTCCAAGTCTTC-GAAGAAGAGTGATGGAGACTCCTGC 3663
||||||||||||||||| |||||||||||||| | ||||||| | |||||||| || ||
Sbjct 3599 AGAAGAGCGATGGAGACACCAACTCCAAGTCT-CAGAAGAAGGGCGATGGAGATTCGAGC 3657
Query 3664 TCCAAGTCACAGAAGAAGAGCGATGGAGACACCAACTCCAAGTCTCAGAAGAAGGGCGAT 3723
|||||||| || ||||||| ||||||||| | | ||| |||||||| |||||| |||||
Sbjct 3658 TCCAAGTCTCACAAGAAGAACGATGGAGATTCGAGCTCTAAGTCTCACAAGAAGAGCGAT 3717
Query 3724 GGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTC 3767
||||| || || || |||||||| ||||||||||||||||||||
Sbjct 3718 GGAGACTCCAGTTCTAAGTCTCAGAAGAAGAACGATGGAGATTC 3761
Score = 433 bits (234), Expect = 6e-120
Identities = 359/419 (86%), Gaps = 10/419 (2%)
Strand=Plus/Plus
Query 3459 GAAGAAGAGCGATGGGGATTCTAACTC-CA-AGTCTTCGAAGAAGAGCGATGGGGATTCC 3516
|||||||| || || || ||||| || || ||| | ||||||| ||| || |||||
Sbjct 3345 GAAGAAGAATGAAGGAGACTCTAAATCTCAGAGTAGT--AAGAAGAACGAAGGAGATTCT 3402
Query 3517 AACTCCAAGTCTTC-GAAGAAGAGCGACGGGGATTCCAACTCCAAGTCTTCGAAGAAGAG 3575
||||||||| || ||||||||||| || ||||||||||| |||| ||||||||||||
Sbjct 3403 GGCTCCAAGTC-TCATAAGAAGAGCGATGGAGATTCCAACTCAAAGTTTTCGAAGAAGAG 3461
Query 3576 CGATGGGGATTCCAACTCCAAGTCTTCGAAGAAGAGCGATGGAGACTCCAACTCCAAGTC 3635
|||||| || |||||||||||||||||||||||||||||||| || || |||||||||||
Sbjct 3462 CGATGGAGACTCCAACTCCAAGTCTTCGAAGAAGAGCGATGGGGATTCTAACTCCAAGTC 3521
Query 3636 TTCGAAGAAGAGTGATGGAGACTCCT-GCTCCAAGTC-ACAGAAGAAGAGCGATGGAGAC 3693
|||||||||||| ||||| || | || ||| ||||| | ||||||||| |||||||||
Sbjct 3522 TTCGAAGAAGAGCGATGGGGA-TTCTAACTCGAAGTCTTC-GAAGAAGAGTGATGGAGAC 3579
Query 3694 ACCAACTCCAAGTCTCAGAAGAAGGGCGATGGAGATTCGAGCTCCAAGTCTCACAAGAAG 3753
|| ||||||||| ||||||||| |||||||||| | | |||||||||||| ||||||
Sbjct 3580 TCCTGCTCCAAGTCACAGAAGAAGAGCGATGGAGACACCAACTCCAAGTCTCAGAAGAAG 3639
Query 3754 AACGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTCAAGCTCTAAG 3813
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3640 GGCGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGAACGATGGAGATTCGAGCTCTAAG 3699
Query 3814 TCTCACAAGAAGAGCGATGGAGATTCGAGCTCTAAGTCTCACAAGAAGAGCGAAGGAGA 3872
||||||||||||||||||||||| || || ||||||||||| ||||||| ||| |||||
Sbjct 3700 TCTCACAAGAAGAGCGATGGAGACTCCAGTTCTAAGTCTCAGAAGAAGAACGATGGAGA 3758
Score = 398 bits (215), Expect = 2e-109
Identities = 304/347 (88%), Gaps = 6/347 (2%)
Strand=Plus/Plus
Query 3388 AAGAAGAACGAAGGAGATTCCAACTCAAAGTCTTCGAAGAAGAGCGATGGAGATTCTAAC 3447
||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| || |||
Sbjct 3418 AAGAAGAGCGATGGAGATTCCAACTCAAAGTTTTCGAAGAAGAGCGATGGAGACTCCAAC 3477
Query 3448 TCCAAGTCCTCGAAGAAGAGCGATGGGGATTCTAACTCCAAGTCTTCGAAGAAGAGCGAT 3507
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3478 TCCAAGTCTTCGAAGAAGAGCGATGGGGATTCTAACTCCAAGTCTTCGAAGAAGAGCGAT 3537
Query 3508 GGGGATTCCAACTCCAAGTCTTCGAAGAAGAGCGACGGGGATTCCAACTCCAAGTCTTC- 3566
|||||||| ||||| ||||||||||||||||| || || || ||| ||||||||| |
Sbjct 3538 GGGGATTCTAACTCGAAGTCTTCGAAGAAGAGTGATGGAGACTCCTGCTCCAAGTCA-CA 3596
Query 3567 GAAGAAGAGCGATGGGGATTCCAACTCCAAGTCTTC-GAAGAAGAGCGATGGAGACTCCA 3625
||||||||||||||| || |||||||||||||| | ||||||| |||||||||| || |
Sbjct 3597 GAAGAAGAGCGATGGAGACACCAACTCCAAGTCT-CAGAAGAAGGGCGATGGAGATTCGA 3655
Query 3626 ACTCCAAGTCTT-CGAAGAAGAGTGATGGAGACTCCTGCTCCAAGTCACAGAAGAAGAGC 3684
|||||||||| | ||||||| |||||||| || |||| ||||| || |||||||||
Sbjct 3656 GCTCCAAGTCTCAC-AAGAAGAACGATGGAGATTCGAGCTCTAAGTCTCACAAGAAGAGC 3714
Query 3685 GATGGAGACACCAACTCCAAGTCTCAGAAGAAGGGCGATGGAGATTC 3731
||||||||| ||| || ||||||||||||||| ||||||||||||
Sbjct 3715 GATGGAGACTCCAGTTCTAAGTCTCAGAAGAAGAACGATGGAGATTC 3761
Score = 337 bits (182), Expect = 5e-91
Identities = 277/322 (86%), Gaps = 10/322 (3%)
Strand=Plus/Plus
Query 3377 CTCAGAG-TTT-GAAGAAGAACGAAGGAGATTCCAACTCAAAGTCTTCGAAGAAGAGCGA 3434
|||| || ||| |||||||| ||| ||||| |||||||| ||||||||||||||||||||
Sbjct 3441 CTCAAAGTTTTCGAAGAAGAGCGATGGAGACTCCAACTCCAAGTCTTCGAAGAAGAGCGA 3500
Query 3435 TGGAGATTCTAACTCCAAGTCCTCGAAGAAGAGCGATGGGGATTCTAACTCCAAGTCTTC 3494
||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 3501 TGGGGATTCTAACTCCAAGTCTTCGAAGAAGAGCGATGGGGATTCTAACTCGAAGTCTTC 3560
Query 3495 GAAGAAGAGCGATGGGGATTCCAACTCCAAGTCTTC-GAAGAAGAGCGACGGGGATTCCA 3553
||||||||| ||||| || ||| ||||||||| | |||||||||||| || || |||
Sbjct 3561 GAAGAAGAGTGATGGAGACTCCTGCTCCAAGTCA-CAGAAGAAGAGCGATGGAGACACCA 3619
Query 3554 ACTCCAAGTCTTC-GAAGAAGAGCGATGGGGATTCCAACTCCAAGTCTT-CGAAGAAGAG 3611
||||||||||| | ||||||| ||||||| ||||| | |||||||||| | |||||||
Sbjct 3620 ACTCCAAGTCT-CAGAAGAAGGGCGATGGAGATTCGAGCTCCAAGTCTCAC-AAGAAGAA 3677
Query 3612 CGATGGAGACTCCAACTCCAAGTCTT-CGAAGAAGAGTGATGGAGACTCCTGCTCCAAGT 3670
||||||||| || | ||| |||||| | |||||||| |||||||||||| | || ||||
Sbjct 3678 CGATGGAGATTCGAGCTCTAAGTCTCAC-AAGAAGAGCGATGGAGACTCCAGTTCTAAGT 3736
Query 3671 CACAGAAGAAGAGCGATGGAGA 3692
| |||||||||| |||||||||
Sbjct 3737 CTCAGAAGAAGAACGATGGAGA 3758
Score = 259 bits (140), Expect = 1e-67
Identities = 257/313 (82%), Gaps = 10/313 (3%)
Strand=Plus/Plus
Query 3604 AAGAAGAGCGATGGAGACTCCAACTCCAAGTCTTC-GAAGAAGAGTGATGGAGACTCCTG 3662
||||||| ||| ||||| || ||||||||| || |||||||| |||||||| |||
Sbjct 3382 AAGAAGAACGAAGGAGATTCTGGCTCCAAGTC-TCATAAGAAGAGCGATGGAGATTCCAA 3440
Query 3663 CTCCAAG-TCACAGAAGAAGAGCGATGGAGACACCAACTCCAAGTC-TCAGAAGAAGGGC 3720
||| ||| | | ||||||||||||||||||| ||||||||||||| || ||||||| ||
Sbjct 3441 CTCAAAGTTTTC-GAAGAAGAGCGATGGAGACTCCAACTCCAAGTCTTC-GAAGAAGAGC 3498
Query 3721 GATGGAGATTCGAGCTCCAAGTC-TCACAAGAAGAACGATGGAGATTCGAGCTCCAAGTC 3779
||||| ||||| | ||||||||| || ||||||| |||||| ||||| | ||| |||||
Sbjct 3499 GATGGGGATTCTAACTCCAAGTCTTC-GAAGAAGAGCGATGGGGATTCTAACTCGAAGTC 3557
Query 3780 -TCACAAGAAGAACGATGGAGATTCAAGCTCTAAGTCTCACAAGAAGAGCGATGGAGATT 3838
|| ||||||| |||||||| || |||| ||||| || |||||||||||||||||
Sbjct 3558 TTC-GAAGAAGAGTGATGGAGACTCCTGCTCCAAGTCACAGAAGAAGAGCGATGGAGACA 3616
Query 3839 CGAGCTCTAAGTCTCACAAGAAGAGCGAAGGAGACTCCAGTTCTAAGTCTCACAAGAAGA 3898
| | ||| |||||||| |||||| |||| ||||| || || || ||||||||||||||||
Sbjct 3617 CCAACTCCAAGTCTCAGAAGAAGGGCGATGGAGATTCGAGCTCCAAGTCTCACAAGAAGA 3676
Query 3899 ACGATGGAGATTC 3911
|||||||||||||
Sbjct 3677 ACGATGGAGATTC 3689
> Ahg470566 jgi|Araly1|470566|fgenesh2_kg.1__520__AT1G05630.1
Length=3849
Score = 793 bits (429), Expect = 0.0
Identities = 1454/1934 (75%), Gaps = 129/1934 (7%)
Strand=Plus/Plus
Query 400 CCTGAATTCGTCGGATCCGGAGGCGGTGTTGGGATGTTTAAAGTCCCGACGCG-GTCTCC 458
||||||||| |||| | |||||||| | ||||| || || |||||| ||| | | |
Sbjct 460 CCTGAATTCATCGGCGCTGGAGGCGGCGCCGGGATATTCAAGGTCCCGGTGCGCG-CGGC 518
Query 459 TTTGCA-CTCGGCGCGTCCTCCTTGT-TTAGAGTTGAGACCACATCCGTTGAA-GGAGAC 515
|||| | ||| ||||| || ||| || ||| |||| ||||||||||| || ||||||
Sbjct 519 GGTGCATCCCGG-ACGTCCGCCGTGTCTT-GAGCTGAGGCCACATCCGTT-AAGGGAGAC 575
Query 516 TCAGGTTGGGAGATTCTTGAGGAACATTGCTTGTACGGAGACGCAA-TTGTGGGCTGGAC 574
||| ||||| ||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct 576 GCAGACTGGGAAATTCTTGAGGAACATTGCTTGTACGGAGACGCAGCTT-TGGGCTGGTC 634
Query 575 AAGAGAGTGGTGTTAGATTCTGGAACTTTG-ATGATGCCTTTGAGCCAGGTTGTGGT-TT 632
|||||| |||||| || |||||||| |||| | ||||| | |||| | || |||||| ||
Sbjct 635 AAGAGAATGGTGTGAGGTTCTGGAA-TTTGGAAGATGCGTATGAGGCTGGGTGTGGTATT 693
Query 633 AAGCGGCC-GTGTACAGAGAGGTGATGAGGATGCTGCACCGTTTCAAGAGTCGGCTAGTA 691
| |||| | |||| | |||| ||||| ||| | || |||||||| ||||||| || ||
Sbjct 694 G-GTGGCCAG-GTACGGCGAGGGGATGAAGATACGGCGCCGTTTCATGAGTCGGTTACTA 751
Query 692 CTTCTCCCACCACT-TGTTTGATGGTTGAT-AATGGGAATAGGCTTGTT-TGGAGTGGTC 748
||||||| || | | |||||| ||| ||| || | || | |||| || ||||||||||
Sbjct 752 CTTCTCCTACAA-TGTGTTTGGTGGCTGACCAAAGC-AACAAGCTT-TTGTGGAGTGGTC 808
Query 749 ATAAAGATGG-AAAGATTCGGTCTTGGAAGATGGATTAT-GTGCT-TGA-TGATGGTGAT 804
| || ||||| ||| || ||| |||||||||||||| | || || | ||||| ||||
Sbjct 809 ACAAGGATGGCAAA-ATCCGGGCTTGGAAGATGGATCAGAGTTCTGTTTCTGATGATGAT 867
Query 805 GATTC---TCCTTTCAAGGAAG-G--TCTAGCTTGGCAAGCTCATAAG-GGTCCTGTCAA 857
||||| |||||||||||| | | ||| | | ||| ||||||| | |||||||||||
Sbjct 868 GATTCAAATCCTTTCAAGGA-GCGAATCTCG-T-GGCTAGCTCATC-GTGGTCCTGTCAA 923
Query 858 TTCCGTAATCATGAGTTCTTATGGCGATTTGTGGTCATGTTCAGAAGGTGGTGTGATAAA 917
|||| | |||| || |||||||| ||| ||||||||||||| ||||| |||||||||||
Sbjct 924 TTCCATTGTCATTAGCTCTTATGGTGATATGTGGTCATGTTCTGAAGGAGGTGTGATAAA 983
Query 918 GATATGGACTTGGGA-ATC-TATGGAGAAATCTCTT-TCGCTTAGGTTGGAGGAGAAGCA 974
|||||| ||||||| | | | | ||||||||||| | ||||| ||||||||| ||
Sbjct 984 AATATGGCCTTGGGATA-CGT-TAGAGAAATCTCTGCT-GCTTAAACCGGAGGAGAAACA 1040
Query 975 TATGGCTGCTTTGTTGGTGGAAAGGTCAGGGATTGATCTCAGG-GCTCAAGTTACTGTCA 1033
||||||||||| || ||||| ||||| | ||||| || ||| || |||||||||||||
Sbjct 1041 CATGGCTGCTTTATTAGTGGAGAGGTCTGCCATTGACCTAAGGAGC-CAAGTTACTGTCA 1099
Query 1034 ACGGGACTTGCAATATATCTTCCTCTGAAGTCAAGTGTTTGTTAGCTGATA-ATGTAAGA 1092
| ||||| || | ||||||||||| |||||||||| ||||||||| ||| | ||||||
Sbjct 1100 ATGGGACATGTAGCATATCTTCCTCAGAAGTCAAGTTTTTGTTAGCCGATTCA-GTAAGA 1158
Query 1093 TCCAAAGTTTGGGCTGCT-CAGCTTCAAAC-C-TTCTCCTTGTGGGATGGTCGTACAAAA 1149
| ||||| ||||||| | ||| | || | | |||||| | ||||||| ||| | |||
Sbjct 1159 GCTAAAGTGTGGGCTG-TGCAG-T-CACTCTCATTCTCCATCTGGGATGCTCGGAGTAAA 1215
Query 1150 GAG-TTACTGAAAGTGTTCAAC-TCAGAAGGTCAGACT-GAAAA-CA-GGGTTGACATGC 1204
|| || |||||||| || || | || || || | | || || | ||| |||||||
Sbjct 1216 GACCTT-CTGAAAGTTTTAAATGTT-GAGGGGCA-AGTTGAGAATCGTGGG--GACATGC 1270
Query 1205 CAT-TGGGGCAGGATCAGCCTGCTGCTGAAGATGAGATGAAGGCCAAAATTGCTTC-CA- 1261
|| | || || || | | | ||| ||||| ||||| || || |||| |
Sbjct 1271 CACCTATA-CAAGACCAACAAG-T--TGATGATGAAATGAAATTGAAG-TT-CTTCTCGG 1324
Query 1262 CTTCGAAGAAGG-AGAAACCGCATGGATT-CTTGCAACGCTCAAGGAATGCTATAATGGG 1319
|||| || |||| | ||||| || || || || ||| || ||| | ||||||||||||||
Sbjct 1325 CTTCAAA-AAGGGAAAAACCACAGGGCTTTCT-GCAGCGATCACGCAATGCTATAATGGG 1382
Query 1320 AGCTGC-GGATGCTGTTAGAAGGGTTGCAACAAGAGGAGGAGGGGC-TTAT--GAAGATG 1375
|||||| ||| |||||| | | || || || ||| | | ||| || || | ||||||
Sbjct 1383 AGCTGCAGGA-GCTGTTCGCCGAGTCGCCACTAGAAGTGCAGGTGCGTTTTCAGAAGATA 1441
Query 1376 CCAA-AAGAACAGAAGCCATGGTTTTAGCCGGGGATGGCATGATTTGGACCGGCTGCACA 1434
| | || ||||||||| || || ||||| | ||||| | || ||||| || ||| |
Sbjct 1442 CTAGGAA-AACAGAAGCTATCGTGTTAGCTGTAGATGGAACAATATGGACTGGAAGCATA 1500
Query 1435 AATGGATTGC-TTATACAATGGGACGGAAATGGAAACCGGTTGCAAGATTTCCGTCACCA 1493
| ||| | | || | || ||||| |||||||||||||| |||| ||| | ||||||
Sbjct 1501 AGTGGCCT-CATTGTTCAGTGGGATGGAAATGGAAACCGCTTGCGGGATGTGAATCACCA 1559
Query 1494 TCAATGTGC-TGTACTGTG-TTTCTGCACGTTCGGGGAAAGGATATACATTGGTTATGTT 1551
||| | || ||| |||| ||| ||||| || || || | ||||| | |||||||
Sbjct 1560 TCACCG-GCCTGTTTTGTGCTTT-TGCACTTTTGGCGATCGAATATATGTGGGTTATGCA 1617
Query 1552 AGTGG-TCACATCCAGATAATTG-ATCTC-GAAGGTAATCTAATCGCGGGATGGGTTGCA 1608
||||| | |||||||| | ||| || || || || || ||||| | | |||||| ||
Sbjct 1618 AGTGGCT-ACATCCAGGTC-TTGGAT-TCCGACGGAAAGCTAATTTCAAGCTGGGTTTCA 1674
Query 1609 CATAAT-AACGCAGTGATTAAGATGGCAGCAGCCGATGGCTACATTTTCAGCTTAGCCAC 1667
|| ||| ||| | ||||| ||| | ||||||| | ||| | ||||||||| || |||||
Sbjct 1675 CACAATGAAC-CTGTGATAAAGCTAGCAGCAGGTGGTGGTTTCATTTTCAGTTTGGCCAC 1733
Query 1668 TCATGGTGGTA-TACGTGGATGGCCTGTGATTTCTCCTGGGCCTCTTGACGGGATAATAA 1726
||||||||| | |||| |||||| ||||| ||||| || || || ||| |||||
Sbjct 1734 TCATGGTGG-AGTACGAGGATGGTATGTGACATCTCCAGGACCCCTGGACAACATAATCC 1792
Query 1727 GGT-CGGAACTGGCTGAAAAAGAA-CGGACATATGCTCAGACA-GACAGTGTTAGGATTC 1783
| | ||||| || || | || ||| | |||||| |||||| |||| |||||| |||
Sbjct 1793 G-TACGGAATTGTCTCAGAAGGAAACTTT-ATATGC-CAGACAAGACAATGTTAGAATTT 1849
Query 1784 TGACTGGTTCATGGAATGTTGGCCAGGGAAAAGCTTCCCATGATGCGCTTATGTCTTGGT 1843
| | |||| | ||||||||||| || ||| ||||| |||||||| |||||||| |||
Sbjct 1850 TAATTGGTACCTGGAATGTTGGTCAAGGACGGGCTTCACATGATGCACTTATGTCGTGGC 1909
Query 1844 TAGGCTCTGT-AGCATCAGATGTTGGTATTCTTG-TCGTAGGCTTGCAAGAAGTAGAGAT 1901
| || ||||| | | |||||||| || ||| | | | || || |||||||| || |||||
Sbjct 1910 TGGGATCTGTCA-CTTCAGATGTAGGCATTGTCGCT-GTTGGGTTGCAAGAGGTGGAGAT 1967
Query 1902 GGGTGCTGGGTTT-TTGGCAATGTCAGCTGCTAAAGAATCGGTAGGAGGAAACGAAGGGA 1960
||| || || || ||| || |||| |||||||||||| |||| ||| ||||| |
Sbjct 1968 GGGGGCAGGCTTCCTTGCCA-TGTCTGCTGCTAAAGAAACGGTTGGACTT---GAAGGAA 2023
Query 1961 GTAC-GATAGGGCAGTACTGGATAGACACAATAGGGAAAA-C-CTT-A-GACGAAAAAGC 2015
|| | | | ||||| | ||||| || |||| || |||| | ||| | || |||||| |
Sbjct 2024 GTGCTG-TGGGGCAATGGTGGATTGATGCAATTGG-AAAAGCACTTGATGA-GAAAAA-C 2079
Query 2016 AGTGTTTGAACGCATGGGATCAAGGCAGTTAGCTGGT-TTGCTCATTTCACTTTGGGTGA 2074
| | || || || ||||| ||||||||||| || || || || || || ||||||| ||
Sbjct 2080 ACT-TTCGAGCGTATGGGTTCAAGGCAGTTGGCAGGACTT-CTGATATCTCTTTGGGCGA 2137
Query 2075 GGAAGAATCTGAGAACCCATGTAGGCGATATTGATGTTGCAGCAGTTCCATGTGGTTTTG 2134
||||| || | ||||| ||||| || ||| ||||||||||||||||||||||||||||||
Sbjct 2138 GGAAGGATATTAGAACTCATGTTGGAGATCTTGATGTTGCAGCAGTTCCATGTGGTTTTG 2197
Query 2135 GACGCGCAATAGGAAACAAGGGAGGTGTAGGTTTGAGAATTAGGGTCTT-TGATCGGATT 2193
| || || || || |||||||||||||||||| ||||||| || || || ||| || ||
Sbjct 2198 GCCGTGCCATTGGCAACAAGGGAGGTGTAGGTCTGAGAATCAGAGT-TTATGACCGAATA 2256
Query 2194 ATGTGCTTCATCAACTGTCACTTGGCTGCTCATCTAGAAGCTGTAAACCGCAGAAATGCT 2253
|||||||| | || || ||||||||||| ||| | || || || || |||||||| ||
Sbjct 2257 ATGTGCTTTGTGAATTGCCACTTGGCTGCACATTTGGAGGCGGTTAATCGCAGAAACGCG 2316
Query 2254 GATTTTGATCACAT 2267
||||| |||||||
Sbjct 2317 GATTTCAATCACAT 2330
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 159270943005
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5