BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G44120.2
Length=1220
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483534 jgi|Araly1|483534|fgenesh2_kg.4__2594__AT2G44120.2 1229 0.0
Ahg497533 jgi|Araly1|497533|fgenesh2_kg.788__1__AT2G44120.1 1221 0.0
Ahg322471 jgi|Araly1|322471|fgenesh1_pm.C_scaffold_5000015 678 0.0
Ahg478749 jgi|Araly1|478749|fgenesh2_kg.3__1450__AT3G13580.2 560 8e-159
Ahg931559 jgi|Araly1|931559|scaffold_304016.1 213 2e-54
Ahg891439 jgi|Araly1|891439|Al_scaffold_0007_3425 202 5e-51
Ahg906074 jgi|Araly1|906074|Al_scaffold_0003_3202 185 5e-46
> Ahg483534 jgi|Araly1|483534|fgenesh2_kg.4__2594__AT2G44120.2
Length=977
Score = 1229 bits (665), Expect = 0.0
Identities = 789/848 (93%), Gaps = 12/848 (1%)
Strand=Plus/Plus
Query 289 GCTATGTATGTAGGAGAAATGGCTGAATCCAAGGTAGTGGTTCCAGAGTCTGTGCTAAAG 348
||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 133 GCTTTGTTTGTAGGAGAAATGGCTGAATCCAAGGTAGTGGTACCAGAGTCTGTATTAAAA 192
Query 349 AAGATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAG 408
||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||
Sbjct 193 AAGATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAGAGGAAACTGTTGCTGCTAAG 252
Query 409 AAGAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAA 468
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 253 AAGAAGAGTGTTGACACCCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAA 312
Query 469 TACGCTGAGAAGGATAACGAGTTGATCCGATTGAAGCGGGAGGCTAAGTTGAAAGGAGGT 528
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 313 TACGCTGAGAAGGATAATGAGTTGATCCGATTGAAAAGGGAGGCTAAGTTGAAAGGAGGG 372
Query 529 TTCTACGTTGACCCTGAGGCTAAGTTGCTCTTTATCATTCGTATCCGTGGTATCAATGCC 588
||||| ||||| || ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 373 TTCTATGTTGATCCAGAGGCGAAATTGCTCTTTATCATTCGTATCCGTGGTATCAATGCC 432
Query 589 ATTGACCCAAAAACCAAGAAGATTCTGCAGCTCCTGCGTTTGAGACAGATCTTCAATGGT 648
|||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||
Sbjct 433 ATTGACCCAAAAACCAAGAAAATTTTGCAGCTCCTGCGTTTGAGACAGATCTTTAATGGT 492
Query 649 GTGTTTCTTAAGGTGAACAAGGCAACAGTAAACATGCTGCGCCGAGTTGAACCATACGTG 708
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 493 GTGTTTCTTAAGGTGAACAAGGCAACAGTAAACATGTTGCGCCGAGTTGAACCTTACGTG 552
Query 709 ACTTACGGATACCCAAACTTGAAGAGCGTTAAGGAACTGATCTACAAAAGAGGTTATGGA 768
|||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct 553 ACTTACGGATACCCAAACTTGAAGAGTGTCAAGGAACTGATCTACAAAAGGGGTTATGGA 612
Query 769 AAGCTGAACCACCAGAGGATAGCACTTACTGACAACTCCATTGTGGATCAGGCTCTCGGA 828
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 613 AAGCTGAACCACCAGAGGATAGCACTTACTGACAACTCGATTGTGGATCAAGCTCTAGGG 672
Query 829 AAGCATGGGATCATCTGCGTTGAGGATCTCATCCACGAGATCATGACTGTTGGACCTCAC 888
|||||||| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||
Sbjct 673 AAGCATGGTATCATCTGCGTGGAGGATCTGATCCATGAGATCATGACCGTTGGACCTCAC 732
Query 889 TTCAAGGAAGCCAACAACTTCCTGTGGCCATTCCAATTGAAGGCACCACTCGGTGGCCTT 948
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 733 TTCAAGGAAGCCAACAACTTCCTATGGCCATTCCAATTGAAGGCACCACTCGGTGGTCTT 792
Query 949 AAGAAGAAGAGAAACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAATTTCATC 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 793 AAGAAGAAGAGAAACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAACTTCATC 852
Query 1009 AACGAGCTTGTCAGGAGAATGAATTGATGAAAGC----TTCCTTCTTTATCTTTGC--A- 1061
|||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 853 AACGAGCTTGTCAGGAGAATGAATTGATGAAAGCAAGCTTCCTTCTTTATCTTTGCCCAT 912
Query 1062 -AATTTCAAAGATTTTGGGACC-GAGtttttttttttttGTTCAAGTTATCAGAGACTTG 1119
||||||| ||||||||||| | |||| || ||||| |||| ||| ||||||||||||
Sbjct 913 TAATTTCATAGATTTTGGGATCTGAGTGTTCTTTTT---GTTCCAGTGATCAGAGACTTG 969
Query 1120 TGATCTTT 1127
||||||||
Sbjct 970 TGATCTTT 977
Score = 76.8 bits (41), Expect = 3e-13
Identities = 50/54 (93%), Gaps = 2/54 (4%)
Strand=Plus/Plus
Query 24 ATTTGTTTGTTCTGATGTTTGTGAGATCGATAAACCC-AGTTGTTCTAGTTCTA 76
|||||||||||||||||||||||||||| |||||||| | |||||| |||||||
Sbjct 1 ATTTGTTTGTTCTGATGTTTGTGAGATCAATAAACCCGA-TTGTTCCAGTTCTA 53
> Ahg497533 jgi|Araly1|497533|fgenesh2_kg.788__1__AT2G44120.1
Length=949
Score = 1221 bits (661), Expect = 0.0
Identities = 779/835 (93%), Gaps = 12/835 (1%)
Strand=Plus/Plus
Query 302 GAGAAATGGCTGAATCCAAGGTAGTGGTTCCAGAGTCTGTGCTAAAGAAGATCAAGAGGC 361
|||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||
Sbjct 118 GAGAAATGGCTGAATCCAAGGTAGTGGTACCAGAGTCTGTATTAAAAAAGATCAAGAGGC 177
Query 362 AAGAGGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTG 421
|||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||
Sbjct 178 AAGAGGAATGGGCATTGGCCAAGAAAGAGGAAACTGTTGCTGCTAAGAAGAAGAGTGTTG 237
Query 422 AGGCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATACGCTGAGAAGG 481
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 AGACCCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATACGCTGAGAAGG 297
Query 482 ATAACGAGTTGATCCGATTGAAGCGGGAGGCTAAGTTGAAAGGAGGTTTCTACGTTGACC 541
|||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||| |
Sbjct 298 ATAATGAGTTGATCCGATTGAAAAGGGAGGCTAAGTTGAAAGGAGGGTTCTATGTTGATC 357
Query 542 CTGAGGCTAAGTTGCTCTTTATCATTCGTATCCGTGGTATCAATGCCATTGACCCAAAAA 601
| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 CAGAGGCGAAATTGCTCTTTATCATTCGTATCCGTGGTATCAATGCCATTGACCCAAAAA 417
Query 602 CCAAGAAGATTCTGCAGCTCCTGCGTTTGAGACAGATCTTCAATGGTGTGTTTCTTAAGG 661
||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 418 CCAAGAAAATTTTGCAGCTCCTGCGTTTGAGACAGATCTTTAATGGTGTGTTTCTTAAGG 477
Query 662 TGAACAAGGCAACAGTAAACATGCTGCGCCGAGTTGAACCATACGTGACTTACGGATACC 721
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 478 TGAACAAGGCAACAGTAAACATGTTGCGCCGAGTTGAACCTTACGTGACTTACGGATACC 537
Query 722 CAAACTTGAAGAGCGTTAAGGAACTGATCTACAAAAGAGGTTATGGAAAGCTGAACCACC 781
||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 538 CAAACTTGAAGAGTGTCAAGGAACTGATCTACAAAAGGGGTTATGGAAAGCTGAACCACC 597
Query 782 AGAGGATAGCACTTACTGACAACTCCATTGTGGATCAGGCTCTCGGAAAGCATGGGATCA 841
||||||||||||||||||||||||| ||||||||||| ||||| || |||||||| ||||
Sbjct 598 AGAGGATAGCACTTACTGACAACTCGATTGTGGATCAAGCTCTAGGGAAGCATGGTATCA 657
Query 842 TCTGCGTTGAGGATCTCATCCACGAGATCATGACTGTTGGACCTCACTTCAAGGAAGCCA 901
||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 658 TCTGCGTGGAGGATCTGATCCATGAGATCATGACCGTTGGACCTCACTTCAAGGAAGCCA 717
Query 902 ACAACTTCCTGTGGCCATTCCAATTGAAGGCACCACTCGGTGGCCTTAAGAAGAAGAGAA 961
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 718 ACAACTTCCTATGGCCATTCCAATTGAAGGCACCACTCGGTGGTCTTAAGAAGAAGAGAA 777
Query 962 ACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAATTTCATCAACGAGCTTGTCA 1021
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 778 ACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAACTTCATCAACGAGCTTGTCA 837
Query 1022 GGAGAATGAATTGATGAAAGC----TTCCTTCTTTATCTTTGC--A--AATTTCAAAGAT 1073
||||||||||||||||||||| |||||||||||||||||| | ||||||| ||||
Sbjct 838 GGAGAATGAATTGATGAAAGCAAGCTTCCTTCTTTATCTTTGCCCATTAATTTCATAGAT 897
Query 1074 TTTGGGACC-GAGtttttttttttttGTTCAAGTTATCAGAGACTTGTGATCTTT 1127
||||||| | |||| || ||||| |||| ||| ||||||||||||||||||||
Sbjct 898 TTTGGGATCTGAGTGTTCTTTTT---GTTCCAGTGATCAGAGACTTGTGATCTTT 949
> Ahg322471 jgi|Araly1|322471|fgenesh1_pm.C_scaffold_5000015
Length=729
Score = 678 bits (367), Expect = 0.0
Identities = 617/737 (84%), Gaps = 20/737 (3%)
Strand=Plus/Plus
Query 307 ATGGCTGAATCCAAGGTAGTGGTTCCAGAGTCTGTGCTAAAGAAGATCAAGAG-GCAAGA 365
|||| ||| || ||||| || ||||| ||||| ||| | |||||| ||||| | | ||
Sbjct 1 ATGGTTGAGTCAAAGGTTGTAGTTCCGGAGTCGGTGTTGAAGAAGCGGAAGAGAG-AGGA 59
Query 366 GGAATGGGCATTGGCCAAGAAAG-ATGAA-GCTGTAGCTGCTAAGAAGAAGAGTGTTGAG 423
|||||||| |||| ||| ||| | ||| |||| ||| || |||||||||| | |||
Sbjct 60 AGAATGGGCTTTGGAGAAG-AAGCA-GAATGCTGAAGCCGCCAAGAAGAAGAACGCAGAG 117
Query 424 GCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTA-TGCCAAAGAATACGCTGAGAAGGA 482
| | |||||||||||||| ||||| ||||| || | |||| ||||| || ||||||||
Sbjct 118 AACAGGAAGCTTATCTTCAAAAGAGCCGAGCAATACT-CCAAGGAATATGCCGAGAAGGA 176
Query 483 TAACGAGTTGATC-CGATTGAAGCGGGAGGCTAAG-TTGAAAGGAGGTTTCTACGTTGAC 540
|| ||||||||| || ||||| || ||||| ||| || || ||||||||||| ||||||
Sbjct 177 GAAGGAGTTGATCTCG-TTGAAACGCGAGGCCAAGCTT-AAGGGAGGTTTCTATGTTGAC 234
Query 541 CCTGAGGCTAAGTTGC-TCTTTATCATTCGTATCCGTGGTATCAATGCCATTGACCCAAA 599
||||| |||||| | | | || ||||| ||||||||||||||||||||||||||||| ||
Sbjct 235 CCTGAAGCTAAGCT-CTTGTTCATCATCCGTATCCGTGGTATCAATGCCATTGACCCTAA 293
Query 600 AACCAAGAAGATTCTGCAGCTCCTGCGTTTGAGACAGATCTTCAATGGTGTGTTTC-TTA 658
|||||||||||||| ||||| |||||||||||||||| ||||||||||| |||| |||
Sbjct 294 GACCAAGAAGATTCTCCAGCTTTTGCGTTTGAGACAGATTTTCAATGGTGT-TTTCCTTA 352
Query 659 AGGTGAACAAGGCAACAGTAAACATGCTGCGCCGAGTTGAACCATACGTGACTTACGGAT 718
| || |||||||| ||| | |||||||| ||||| ||||| || || || ||||||||||
Sbjct 353 AAGTCAACAAGGCTACAATGAACATGCTTCGCCGTGTTGAGCCCTATGTCACTTACGGAT 412
Query 719 ACCCAAACTTGAAGAGCGTTAAGGAACTGATCTACAAAAGAGGTTATGGAAAGCTGAACC 778
|||| ||||||||||| || |||||| |||||||||| ||||||||||| ||||| ||||
Sbjct 413 ACCCTAACTTGAAGAGTGTCAAGGAATTGATCTACAAGAGAGGTTATGGCAAGCTAAACC 472
Query 779 ACCAGAGGATAGCACTT-ACTGACAACTCCATTGTGGATCAGGCTCTCGGAAAGCATGGG 837
|||||||| | || || ||||||||||| || || || |||||||| ||||||||||||
Sbjct 473 ACCAGAGGGTGGCT-TTGACTGACAACTCTATCGTTGAGCAGGCTCTAGGAAAGCATGGG 531
Query 838 ATCATCTGCGTTGAGGATCTCATCCACGAGAT-CATGACTGTTGGACCTCACTTCAAGGA 896
||||||||| ||||||| | ||||||||||| | | || || |||||||| ||||||||
Sbjct 532 ATCATCTGCACTGAGGATTTGATCCACGAGATTC-TAACAGTAGGACCTCATTTCAAGGA 590
Query 897 AGCCAACAACTTCCTGTGGCCATTCCAATTGAAGGCACCACTCGGTGGCCTTAAGAAGAA 956
||| ||||||||||| ||||||||||| | |||||||| ||||||||||| ||||||||
Sbjct 591 AGCTAACAACTTCCTTTGGCCATTCCAGCTCAAGGCACCTCTCGGTGGCCTCAAGAAGAA 650
Query 957 GAGAAACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAATTTCATCAACGAGCT 1016
|||||| |||||||| ||||||||||||||||||||| | ||||| |||||||| |||||
Sbjct 651 GAGAAATCACTACGTGGAAGGTGGTGATGCTGGAAACCGTGAGAACTTCATCAATGAGCT 710
Query 1017 TGTCAGGAGAATGAATT 1033
||||||||| |||||||
Sbjct 711 TGTCAGGAGGATGAATT 727
> Ahg478749 jgi|Araly1|478749|fgenesh2_kg.3__1450__AT3G13580.2
Length=1183
Score = 560 bits (303), Expect = 8e-159
Identities = 581/714 (81%), Gaps = 24/714 (3%)
Strand=Plus/Plus
Query 334 GAGTCTGTGCTAAAGAAGATCAAGAGGCAAGAGGAATGGGCA-TTGGCCAAGAAAGATGA 392
||||| ||| | ||||||| |||||| | || ||||||||| || ||||||||| | |
Sbjct 297 GAGTCAGTGTTGAAGAAGAGAAAGAGGGAGGAAGAATGGGCACTT-GCCAAGAAACA-GG 354
Query 393 AGC-TGTA-GCTGCTAAGAAGAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAGCT 450
||| || | |||||||| ||| ||| || |||| | || || || || || | |||
Sbjct 355 AGCTTG-AGGCTGCTAAAAAGCAGAATGCTGAGAAGAGGAAACTCATATTTAACCGGGCT 413
Query 451 GAGCAGTA-TGCCAAAGAATACGC-TGAGAAGGATAA-CGAGTTGATCCGA-TTGAAGCG 506
|||| || | |||| || ||| | ||||| || || || || |||| | |||||||
Sbjct 414 AAGCAATACT-CCAAGGAGTAC-CAGGAGAAAGA-AAGGGAATTAATCC-AGCTGAAGCG 469
Query 507 GGAGGCTAAGTTGAAAGGAGG-TTTCTACGTTGACCCTGAGGCTAAGTTGCTCTTT-ATC 564
||||| || ||||||||||| ||| || |||||||| || ||||| |||| ||| |||
Sbjct 470 TGAGGCAAAATTGAAAGGAGGCTTT-TATGTTGACCCAGAAGCTAAACTGCT-TTTCATC 527
Query 565 ATTCGTATCCGTGGTATCAATGCCATTGACCCAAAAACCAAGAAGATTCTGCAGCTCCTG 624
|| ||||||||||||||||||||||||||||| || || ||||||||| ||||||| ||
Sbjct 528 ATCCGTATCCGTGGTATCAATGCCATTGACCCGAAGACAAAGAAGATTTTGCAGCTTTTG 587
Query 625 CGTTTGAGACAGATCTTCAATGGTGTGTTTCTTAA-GGTGAACAAGGCAAC-AGTAAACA 682
||| | |||||||| |||||||||||||| ||||| ||| ||||||||||| | ||| ||
Sbjct 588 CGTCTAAGACAGATTTTCAATGGTGTGTT-CTTAAAGGTCAACAAGGCAACCATTAA-CA 645
Query 683 TGCTGCGCCGAGTTGAACCATACGTGACTTACGGATACCCAAACTTGAAGAGCGTTAAGG 742
|||| ||||| |||||||| || ||||| || |||||||| ||||| || || || ||||
Sbjct 646 TGCTTCGCCGTGTTGAACCCTATGTGACCTATGGATACCCGAACTTAAAAAGTGTGAAGG 705
Query 743 AACTGATCTACAAAAGAGGTTATGGAAAGCTGAACCACCAGAGGATAGCACTT-ACTGAC 801
|| |||| |||||| |||||| ||||||||| |||||||||||||| || ||| || |||
Sbjct 706 AATTGATTTACAAACGAGGTTTTGGAAAGCTTAACCACCAGAGGATTGC-CTTGACAGAC 764
Query 802 AACTCCATTGTGGATCAGGCTCTCGGAAAGCATGGGATCATCTGCGTTGAGGATCTCATC 861
|| |||||||| || |||| || || |||||||| |||||||||||||||||||| |||
Sbjct 765 AATTCCATTGTAGACCAGGGACTAGGGAAGCATGGCATCATCTGCGTTGAGGATCTGATC 824
Query 862 CACGAGATCATGACTGTTGGACCTCACTTCAAGGAAGCCAACAACTTCCTGTGGCCATTC 921
|| ||||||||||| ||||| || || |||||||||||||||||||| |||||||||||
Sbjct 825 CATGAGATCATGACGGTTGGGCCACATTTCAAGGAAGCCAACAACTTTTTGTGGCCATTC 884
Query 922 CAATTGAAGGCACCACTCGGTGGCCTTAAGAAGAAGAGAAACCACTACGTCGAAGGTGGT 981
|| |||||||| ||| | || || | ||||||||||| ||||| ||||| ||||| ||
Sbjct 885 CAGTTGAAGGCGCCATTGGGAGGGATGAAGAAGAAGAGGAACCATTACGTGGAAGGAGGA 944
Query 982 GATGCTGGAAACAGGGAGAATTTCATCAACGAGCTTGTCAGGAGAATGAATTGA 1035
|||||||||||| | ||||| |||||||||||||| || ||||||||||| |||
Sbjct 945 GATGCTGGAAACCGCGAGAACTTCATCAACGAGCTCGTTAGGAGAATGAACTGA 998
> Ahg931559 jgi|Araly1|931559|scaffold_304016.1
Length=859
Score = 213 bits (115), Expect = 2e-54
Identities = 140/152 (92%), Gaps = 1/152 (1%)
Strand=Plus/Plus
Query 330 TCC-AGAGTCTGTGCTAAAGAAGATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAG 388
||| ||||||||||||||| |||||||||||||||| ||||||| |||||| ||||||||
Sbjct 1 TCCAAGAGTCTGTGCTAAAAAAGATCAAGAGGCAAGTGGAATGGACATTGGTCAAGAAAG 60
Query 389 ATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAG 448
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 61 ATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTGAGACCCGCAAGCTCATCTTCAAGAGAG 120
Query 449 CTGAGCAGTATGCCAAAGAATACGCTGAGAAG 480
|||||||||||| | ||| || |||||||||
Sbjct 121 CTGAGCAGTATGAGAGAGAGTATGCTGAGAAG 152
> Ahg891439 jgi|Araly1|891439|Al_scaffold_0007_3425
Length=255
Score = 202 bits (109), Expect = 5e-51
Identities = 156/178 (88%), Gaps = 5/178 (3%)
Strand=Plus/Plus
Query 307 ATGGCTGAATCCAAGGTAGTGGTTCC-AGAGTCTGTGCTAAAGAAGATCAAGAGGCAAGA 365
||||||||||| |||||||| ||||| |||||||||||| || || || | | | ||
Sbjct 1 ATGGCTGAATCTAAGGTAGTAGTTCCAAGAGTCTGTGCT-AA-AA-ATGACCA-TCGAGT 56
Query 366 GGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTGAGGC 425
||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 57 GGAATGGACATTGGTCAAGAAAGATGAAGTTGTAGCTGCTAAGAAGAAGAGTGTTGAGAC 116
Query 426 CCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATACGCTGAGAAGGAT 483
||||||||| |||||||||||||||||||||||||| | ||| || ||||||||||||
Sbjct 117 CCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGCGAGAGAGTATGCTGAGAAGGAT 174
> Ahg906074 jgi|Araly1|906074|Al_scaffold_0003_3202
Length=222
Score = 185 bits (100), Expect = 5e-46
Identities = 122/133 (92%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 351 GATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAGAA 410
|||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||
Sbjct 3 GATCAAGAGGCAAGTGGAATGGACATTGGTCAACAAAGATGAAGCTGTAGCTGCTAAGAA 62
Query 411 GAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATA 470
||||||||||||| |||||||||| ||||||||||||||||||||||||| | ||| ||
Sbjct 63 GAAGAGTGTTGAGACCCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGAGAGAGAGTA 122
Query 471 CGCTGAGAAGGAT 483
||||||||||||
Sbjct 123 TGCTGAGAAGGAT 135
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45556885815
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5