BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G44120.2 Length=1220 Score E Sequences producing significant alignments: (Bits) Value Ahg483534 jgi|Araly1|483534|fgenesh2_kg.4__2594__AT2G44120.2 1229 0.0 Ahg497533 jgi|Araly1|497533|fgenesh2_kg.788__1__AT2G44120.1 1221 0.0 Ahg322471 jgi|Araly1|322471|fgenesh1_pm.C_scaffold_5000015 678 0.0 Ahg478749 jgi|Araly1|478749|fgenesh2_kg.3__1450__AT3G13580.2 560 8e-159 Ahg931559 jgi|Araly1|931559|scaffold_304016.1 213 2e-54 Ahg891439 jgi|Araly1|891439|Al_scaffold_0007_3425 202 5e-51 Ahg906074 jgi|Araly1|906074|Al_scaffold_0003_3202 185 5e-46 > Ahg483534 jgi|Araly1|483534|fgenesh2_kg.4__2594__AT2G44120.2 Length=977 Score = 1229 bits (665), Expect = 0.0 Identities = 789/848 (93%), Gaps = 12/848 (1%) Strand=Plus/Plus Query 289 GCTATGTATGTAGGAGAAATGGCTGAATCCAAGGTAGTGGTTCCAGAGTCTGTGCTAAAG 348 ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 133 GCTTTGTTTGTAGGAGAAATGGCTGAATCCAAGGTAGTGGTACCAGAGTCTGTATTAAAA 192 Query 349 AAGATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAG 408 ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct 193 AAGATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAGAGGAAACTGTTGCTGCTAAG 252 Query 409 AAGAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAA 468 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct 253 AAGAAGAGTGTTGACACCCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAA 312 Query 469 TACGCTGAGAAGGATAACGAGTTGATCCGATTGAAGCGGGAGGCTAAGTTGAAAGGAGGT 528 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 313 TACGCTGAGAAGGATAATGAGTTGATCCGATTGAAAAGGGAGGCTAAGTTGAAAGGAGGG 372 Query 529 TTCTACGTTGACCCTGAGGCTAAGTTGCTCTTTATCATTCGTATCCGTGGTATCAATGCC 588 ||||| ||||| || ||||| || |||||||||||||||||||||||||||||||||||| Sbjct 373 TTCTATGTTGATCCAGAGGCGAAATTGCTCTTTATCATTCGTATCCGTGGTATCAATGCC 432 Query 589 ATTGACCCAAAAACCAAGAAGATTCTGCAGCTCCTGCGTTTGAGACAGATCTTCAATGGT 648 |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 433 ATTGACCCAAAAACCAAGAAAATTTTGCAGCTCCTGCGTTTGAGACAGATCTTTAATGGT 492 Query 649 GTGTTTCTTAAGGTGAACAAGGCAACAGTAAACATGCTGCGCCGAGTTGAACCATACGTG 708 |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct 493 GTGTTTCTTAAGGTGAACAAGGCAACAGTAAACATGTTGCGCCGAGTTGAACCTTACGTG 552 Query 709 ACTTACGGATACCCAAACTTGAAGAGCGTTAAGGAACTGATCTACAAAAGAGGTTATGGA 768 |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct 553 ACTTACGGATACCCAAACTTGAAGAGTGTCAAGGAACTGATCTACAAAAGGGGTTATGGA 612 Query 769 AAGCTGAACCACCAGAGGATAGCACTTACTGACAACTCCATTGTGGATCAGGCTCTCGGA 828 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct 613 AAGCTGAACCACCAGAGGATAGCACTTACTGACAACTCGATTGTGGATCAAGCTCTAGGG 672 Query 829 AAGCATGGGATCATCTGCGTTGAGGATCTCATCCACGAGATCATGACTGTTGGACCTCAC 888 |||||||| ||||||||||| |||||||| ||||| ||||||||||| |||||||||||| Sbjct 673 AAGCATGGTATCATCTGCGTGGAGGATCTGATCCATGAGATCATGACCGTTGGACCTCAC 732 Query 889 TTCAAGGAAGCCAACAACTTCCTGTGGCCATTCCAATTGAAGGCACCACTCGGTGGCCTT 948 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 733 TTCAAGGAAGCCAACAACTTCCTATGGCCATTCCAATTGAAGGCACCACTCGGTGGTCTT 792 Query 949 AAGAAGAAGAGAAACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAATTTCATC 1008 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 793 AAGAAGAAGAGAAACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAACTTCATC 852 Query 1009 AACGAGCTTGTCAGGAGAATGAATTGATGAAAGC----TTCCTTCTTTATCTTTGC--A- 1061 |||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 853 AACGAGCTTGTCAGGAGAATGAATTGATGAAAGCAAGCTTCCTTCTTTATCTTTGCCCAT 912 Query 1062 -AATTTCAAAGATTTTGGGACC-GAGtttttttttttttGTTCAAGTTATCAGAGACTTG 1119 ||||||| ||||||||||| | |||| || ||||| |||| ||| |||||||||||| Sbjct 913 TAATTTCATAGATTTTGGGATCTGAGTGTTCTTTTT---GTTCCAGTGATCAGAGACTTG 969 Query 1120 TGATCTTT 1127 |||||||| Sbjct 970 TGATCTTT 977 Score = 76.8 bits (41), Expect = 3e-13 Identities = 50/54 (93%), Gaps = 2/54 (4%) Strand=Plus/Plus Query 24 ATTTGTTTGTTCTGATGTTTGTGAGATCGATAAACCC-AGTTGTTCTAGTTCTA 76 |||||||||||||||||||||||||||| |||||||| | |||||| ||||||| Sbjct 1 ATTTGTTTGTTCTGATGTTTGTGAGATCAATAAACCCGA-TTGTTCCAGTTCTA 53 > Ahg497533 jgi|Araly1|497533|fgenesh2_kg.788__1__AT2G44120.1 Length=949 Score = 1221 bits (661), Expect = 0.0 Identities = 779/835 (93%), Gaps = 12/835 (1%) Strand=Plus/Plus Query 302 GAGAAATGGCTGAATCCAAGGTAGTGGTTCCAGAGTCTGTGCTAAAGAAGATCAAGAGGC 361 |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| Sbjct 118 GAGAAATGGCTGAATCCAAGGTAGTGGTACCAGAGTCTGTATTAAAAAAGATCAAGAGGC 177 Query 362 AAGAGGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTG 421 |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct 178 AAGAGGAATGGGCATTGGCCAAGAAAGAGGAAACTGTTGCTGCTAAGAAGAAGAGTGTTG 237 Query 422 AGGCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATACGCTGAGAAGG 481 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 AGACCCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATACGCTGAGAAGG 297 Query 482 ATAACGAGTTGATCCGATTGAAGCGGGAGGCTAAGTTGAAAGGAGGTTTCTACGTTGACC 541 |||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||| | Sbjct 298 ATAATGAGTTGATCCGATTGAAAAGGGAGGCTAAGTTGAAAGGAGGGTTCTATGTTGATC 357 Query 542 CTGAGGCTAAGTTGCTCTTTATCATTCGTATCCGTGGTATCAATGCCATTGACCCAAAAA 601 | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 CAGAGGCGAAATTGCTCTTTATCATTCGTATCCGTGGTATCAATGCCATTGACCCAAAAA 417 Query 602 CCAAGAAGATTCTGCAGCTCCTGCGTTTGAGACAGATCTTCAATGGTGTGTTTCTTAAGG 661 ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 418 CCAAGAAAATTTTGCAGCTCCTGCGTTTGAGACAGATCTTTAATGGTGTGTTTCTTAAGG 477 Query 662 TGAACAAGGCAACAGTAAACATGCTGCGCCGAGTTGAACCATACGTGACTTACGGATACC 721 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 478 TGAACAAGGCAACAGTAAACATGTTGCGCCGAGTTGAACCTTACGTGACTTACGGATACC 537 Query 722 CAAACTTGAAGAGCGTTAAGGAACTGATCTACAAAAGAGGTTATGGAAAGCTGAACCACC 781 ||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| Sbjct 538 CAAACTTGAAGAGTGTCAAGGAACTGATCTACAAAAGGGGTTATGGAAAGCTGAACCACC 597 Query 782 AGAGGATAGCACTTACTGACAACTCCATTGTGGATCAGGCTCTCGGAAAGCATGGGATCA 841 ||||||||||||||||||||||||| ||||||||||| ||||| || |||||||| |||| Sbjct 598 AGAGGATAGCACTTACTGACAACTCGATTGTGGATCAAGCTCTAGGGAAGCATGGTATCA 657 Query 842 TCTGCGTTGAGGATCTCATCCACGAGATCATGACTGTTGGACCTCACTTCAAGGAAGCCA 901 ||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 658 TCTGCGTGGAGGATCTGATCCATGAGATCATGACCGTTGGACCTCACTTCAAGGAAGCCA 717 Query 902 ACAACTTCCTGTGGCCATTCCAATTGAAGGCACCACTCGGTGGCCTTAAGAAGAAGAGAA 961 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 718 ACAACTTCCTATGGCCATTCCAATTGAAGGCACCACTCGGTGGTCTTAAGAAGAAGAGAA 777 Query 962 ACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAATTTCATCAACGAGCTTGTCA 1021 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 778 ACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAACTTCATCAACGAGCTTGTCA 837 Query 1022 GGAGAATGAATTGATGAAAGC----TTCCTTCTTTATCTTTGC--A--AATTTCAAAGAT 1073 ||||||||||||||||||||| |||||||||||||||||| | ||||||| |||| Sbjct 838 GGAGAATGAATTGATGAAAGCAAGCTTCCTTCTTTATCTTTGCCCATTAATTTCATAGAT 897 Query 1074 TTTGGGACC-GAGtttttttttttttGTTCAAGTTATCAGAGACTTGTGATCTTT 1127 ||||||| | |||| || ||||| |||| ||| |||||||||||||||||||| Sbjct 898 TTTGGGATCTGAGTGTTCTTTTT---GTTCCAGTGATCAGAGACTTGTGATCTTT 949 > Ahg322471 jgi|Araly1|322471|fgenesh1_pm.C_scaffold_5000015 Length=729 Score = 678 bits (367), Expect = 0.0 Identities = 617/737 (84%), Gaps = 20/737 (3%) Strand=Plus/Plus Query 307 ATGGCTGAATCCAAGGTAGTGGTTCCAGAGTCTGTGCTAAAGAAGATCAAGAG-GCAAGA 365 |||| ||| || ||||| || ||||| ||||| ||| | |||||| ||||| | | || Sbjct 1 ATGGTTGAGTCAAAGGTTGTAGTTCCGGAGTCGGTGTTGAAGAAGCGGAAGAGAG-AGGA 59 Query 366 GGAATGGGCATTGGCCAAGAAAG-ATGAA-GCTGTAGCTGCTAAGAAGAAGAGTGTTGAG 423 |||||||| |||| ||| ||| | ||| |||| ||| || |||||||||| | ||| Sbjct 60 AGAATGGGCTTTGGAGAAG-AAGCA-GAATGCTGAAGCCGCCAAGAAGAAGAACGCAGAG 117 Query 424 GCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTA-TGCCAAAGAATACGCTGAGAAGGA 482 | | |||||||||||||| ||||| ||||| || | |||| ||||| || |||||||| Sbjct 118 AACAGGAAGCTTATCTTCAAAAGAGCCGAGCAATACT-CCAAGGAATATGCCGAGAAGGA 176 Query 483 TAACGAGTTGATC-CGATTGAAGCGGGAGGCTAAG-TTGAAAGGAGGTTTCTACGTTGAC 540 || ||||||||| || ||||| || ||||| ||| || || ||||||||||| |||||| Sbjct 177 GAAGGAGTTGATCTCG-TTGAAACGCGAGGCCAAGCTT-AAGGGAGGTTTCTATGTTGAC 234 Query 541 CCTGAGGCTAAGTTGC-TCTTTATCATTCGTATCCGTGGTATCAATGCCATTGACCCAAA 599 ||||| |||||| | | | || ||||| ||||||||||||||||||||||||||||| || Sbjct 235 CCTGAAGCTAAGCT-CTTGTTCATCATCCGTATCCGTGGTATCAATGCCATTGACCCTAA 293 Query 600 AACCAAGAAGATTCTGCAGCTCCTGCGTTTGAGACAGATCTTCAATGGTGTGTTTC-TTA 658 |||||||||||||| ||||| |||||||||||||||| ||||||||||| |||| ||| Sbjct 294 GACCAAGAAGATTCTCCAGCTTTTGCGTTTGAGACAGATTTTCAATGGTGT-TTTCCTTA 352 Query 659 AGGTGAACAAGGCAACAGTAAACATGCTGCGCCGAGTTGAACCATACGTGACTTACGGAT 718 | || |||||||| ||| | |||||||| ||||| ||||| || || || |||||||||| Sbjct 353 AAGTCAACAAGGCTACAATGAACATGCTTCGCCGTGTTGAGCCCTATGTCACTTACGGAT 412 Query 719 ACCCAAACTTGAAGAGCGTTAAGGAACTGATCTACAAAAGAGGTTATGGAAAGCTGAACC 778 |||| ||||||||||| || |||||| |||||||||| ||||||||||| ||||| |||| Sbjct 413 ACCCTAACTTGAAGAGTGTCAAGGAATTGATCTACAAGAGAGGTTATGGCAAGCTAAACC 472 Query 779 ACCAGAGGATAGCACTT-ACTGACAACTCCATTGTGGATCAGGCTCTCGGAAAGCATGGG 837 |||||||| | || || ||||||||||| || || || |||||||| |||||||||||| Sbjct 473 ACCAGAGGGTGGCT-TTGACTGACAACTCTATCGTTGAGCAGGCTCTAGGAAAGCATGGG 531 Query 838 ATCATCTGCGTTGAGGATCTCATCCACGAGAT-CATGACTGTTGGACCTCACTTCAAGGA 896 ||||||||| ||||||| | ||||||||||| | | || || |||||||| |||||||| Sbjct 532 ATCATCTGCACTGAGGATTTGATCCACGAGATTC-TAACAGTAGGACCTCATTTCAAGGA 590 Query 897 AGCCAACAACTTCCTGTGGCCATTCCAATTGAAGGCACCACTCGGTGGCCTTAAGAAGAA 956 ||| ||||||||||| ||||||||||| | |||||||| ||||||||||| |||||||| Sbjct 591 AGCTAACAACTTCCTTTGGCCATTCCAGCTCAAGGCACCTCTCGGTGGCCTCAAGAAGAA 650 Query 957 GAGAAACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAATTTCATCAACGAGCT 1016 |||||| |||||||| ||||||||||||||||||||| | ||||| |||||||| ||||| Sbjct 651 GAGAAATCACTACGTGGAAGGTGGTGATGCTGGAAACCGTGAGAACTTCATCAATGAGCT 710 Query 1017 TGTCAGGAGAATGAATT 1033 ||||||||| ||||||| Sbjct 711 TGTCAGGAGGATGAATT 727 > Ahg478749 jgi|Araly1|478749|fgenesh2_kg.3__1450__AT3G13580.2 Length=1183 Score = 560 bits (303), Expect = 8e-159 Identities = 581/714 (81%), Gaps = 24/714 (3%) Strand=Plus/Plus Query 334 GAGTCTGTGCTAAAGAAGATCAAGAGGCAAGAGGAATGGGCA-TTGGCCAAGAAAGATGA 392 ||||| ||| | ||||||| |||||| | || ||||||||| || ||||||||| | | Sbjct 297 GAGTCAGTGTTGAAGAAGAGAAAGAGGGAGGAAGAATGGGCACTT-GCCAAGAAACA-GG 354 Query 393 AGC-TGTA-GCTGCTAAGAAGAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAGCT 450 ||| || | |||||||| ||| ||| || |||| | || || || || || | ||| Sbjct 355 AGCTTG-AGGCTGCTAAAAAGCAGAATGCTGAGAAGAGGAAACTCATATTTAACCGGGCT 413 Query 451 GAGCAGTA-TGCCAAAGAATACGC-TGAGAAGGATAA-CGAGTTGATCCGA-TTGAAGCG 506 |||| || | |||| || ||| | ||||| || || || || |||| | ||||||| Sbjct 414 AAGCAATACT-CCAAGGAGTAC-CAGGAGAAAGA-AAGGGAATTAATCC-AGCTGAAGCG 469 Query 507 GGAGGCTAAGTTGAAAGGAGG-TTTCTACGTTGACCCTGAGGCTAAGTTGCTCTTT-ATC 564 ||||| || ||||||||||| ||| || |||||||| || ||||| |||| ||| ||| Sbjct 470 TGAGGCAAAATTGAAAGGAGGCTTT-TATGTTGACCCAGAAGCTAAACTGCT-TTTCATC 527 Query 565 ATTCGTATCCGTGGTATCAATGCCATTGACCCAAAAACCAAGAAGATTCTGCAGCTCCTG 624 || ||||||||||||||||||||||||||||| || || ||||||||| ||||||| || Sbjct 528 ATCCGTATCCGTGGTATCAATGCCATTGACCCGAAGACAAAGAAGATTTTGCAGCTTTTG 587 Query 625 CGTTTGAGACAGATCTTCAATGGTGTGTTTCTTAA-GGTGAACAAGGCAAC-AGTAAACA 682 ||| | |||||||| |||||||||||||| ||||| ||| ||||||||||| | ||| || Sbjct 588 CGTCTAAGACAGATTTTCAATGGTGTGTT-CTTAAAGGTCAACAAGGCAACCATTAA-CA 645 Query 683 TGCTGCGCCGAGTTGAACCATACGTGACTTACGGATACCCAAACTTGAAGAGCGTTAAGG 742 |||| ||||| |||||||| || ||||| || |||||||| ||||| || || || |||| Sbjct 646 TGCTTCGCCGTGTTGAACCCTATGTGACCTATGGATACCCGAACTTAAAAAGTGTGAAGG 705 Query 743 AACTGATCTACAAAAGAGGTTATGGAAAGCTGAACCACCAGAGGATAGCACTT-ACTGAC 801 || |||| |||||| |||||| ||||||||| |||||||||||||| || ||| || ||| Sbjct 706 AATTGATTTACAAACGAGGTTTTGGAAAGCTTAACCACCAGAGGATTGC-CTTGACAGAC 764 Query 802 AACTCCATTGTGGATCAGGCTCTCGGAAAGCATGGGATCATCTGCGTTGAGGATCTCATC 861 || |||||||| || |||| || || |||||||| |||||||||||||||||||| ||| Sbjct 765 AATTCCATTGTAGACCAGGGACTAGGGAAGCATGGCATCATCTGCGTTGAGGATCTGATC 824 Query 862 CACGAGATCATGACTGTTGGACCTCACTTCAAGGAAGCCAACAACTTCCTGTGGCCATTC 921 || ||||||||||| ||||| || || |||||||||||||||||||| ||||||||||| Sbjct 825 CATGAGATCATGACGGTTGGGCCACATTTCAAGGAAGCCAACAACTTTTTGTGGCCATTC 884 Query 922 CAATTGAAGGCACCACTCGGTGGCCTTAAGAAGAAGAGAAACCACTACGTCGAAGGTGGT 981 || |||||||| ||| | || || | ||||||||||| ||||| ||||| ||||| || Sbjct 885 CAGTTGAAGGCGCCATTGGGAGGGATGAAGAAGAAGAGGAACCATTACGTGGAAGGAGGA 944 Query 982 GATGCTGGAAACAGGGAGAATTTCATCAACGAGCTTGTCAGGAGAATGAATTGA 1035 |||||||||||| | ||||| |||||||||||||| || ||||||||||| ||| Sbjct 945 GATGCTGGAAACCGCGAGAACTTCATCAACGAGCTCGTTAGGAGAATGAACTGA 998 > Ahg931559 jgi|Araly1|931559|scaffold_304016.1 Length=859 Score = 213 bits (115), Expect = 2e-54 Identities = 140/152 (92%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 330 TCC-AGAGTCTGTGCTAAAGAAGATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAG 388 ||| ||||||||||||||| |||||||||||||||| ||||||| |||||| |||||||| Sbjct 1 TCCAAGAGTCTGTGCTAAAAAAGATCAAGAGGCAAGTGGAATGGACATTGGTCAAGAAAG 60 Query 389 ATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAG 448 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 61 ATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTGAGACCCGCAAGCTCATCTTCAAGAGAG 120 Query 449 CTGAGCAGTATGCCAAAGAATACGCTGAGAAG 480 |||||||||||| | ||| || ||||||||| Sbjct 121 CTGAGCAGTATGAGAGAGAGTATGCTGAGAAG 152 > Ahg891439 jgi|Araly1|891439|Al_scaffold_0007_3425 Length=255 Score = 202 bits (109), Expect = 5e-51 Identities = 156/178 (88%), Gaps = 5/178 (3%) Strand=Plus/Plus Query 307 ATGGCTGAATCCAAGGTAGTGGTTCC-AGAGTCTGTGCTAAAGAAGATCAAGAGGCAAGA 365 ||||||||||| |||||||| ||||| |||||||||||| || || || | | | || Sbjct 1 ATGGCTGAATCTAAGGTAGTAGTTCCAAGAGTCTGTGCT-AA-AA-ATGACCA-TCGAGT 56 Query 366 GGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTGAGGC 425 ||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||| | Sbjct 57 GGAATGGACATTGGTCAAGAAAGATGAAGTTGTAGCTGCTAAGAAGAAGAGTGTTGAGAC 116 Query 426 CCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATACGCTGAGAAGGAT 483 ||||||||| |||||||||||||||||||||||||| | ||| || |||||||||||| Sbjct 117 CCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGCGAGAGAGTATGCTGAGAAGGAT 174 > Ahg906074 jgi|Araly1|906074|Al_scaffold_0003_3202 Length=222 Score = 185 bits (100), Expect = 5e-46 Identities = 122/133 (92%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 351 GATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAGAA 410 |||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||| Sbjct 3 GATCAAGAGGCAAGTGGAATGGACATTGGTCAACAAAGATGAAGCTGTAGCTGCTAAGAA 62 Query 411 GAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATA 470 ||||||||||||| |||||||||| ||||||||||||||||||||||||| | ||| || Sbjct 63 GAAGAGTGTTGAGACCCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGAGAGAGAGTA 122 Query 471 CGCTGAGAAGGAT 483 |||||||||||| Sbjct 123 TGCTGAGAAGGAT 135 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45556885815 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5