BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G44140.1
Length=3221
Score E
Sequences producing significant alignments: (Bits) Value
Ahg935334 jgi|Araly1|935334|scaffold_403322.1 2326 0.0
Ahg483537 jgi|Araly1|483537|fgenesh2_kg.4__2597__AT2G44130.1 1929 0.0
Ahg486460 jgi|Araly1|486460|fgenesh2_kg.5__2452__AT3G59950.1 1216 0.0
Ahg935335 jgi|Araly1|935335|scaffold_403323.1 156 1e-36
> Ahg935334 jgi|Araly1|935334|scaffold_403322.1
Length=1445
Score = 2326 bits (1259), Expect = 0.0
Identities = 1387/1449 (96%), Gaps = 7/1449 (0%)
Strand=Plus/Plus
Query 188 TTGGTGCTTCATGTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCCTCAACAATGT 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTGGTGCTTCATGTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCCTCAACAATGT 60
Query 248 TCTTCATCAAGCAAGAGTGATACGCATGATAAATCCCCTTTAGTTTCAGATTCTGGACCT 307
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 61 TCTTCATCAAGCAAGAGTGATACGCATGATAAATCCCCTGTAGTTTCAGATTCAGGACCT 120
Query 308 AGTGATAATAAGTCCAAGTTTACCTTATGGTCAAACGTGTTTACGTCTTCTTCCTCAGTT 367
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 121 AGTGATAATAAGTCCAAGTTTACCTTATGGTCAAACGTCTTTACGTCTTCTTCCTCAGTT 180
Query 368 TCTCAACCGTATAGGGAGTCTTCAACTTCTGGGCATAAGCAAGTTTGCACCACTCGTAAT 427
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 181 TCTCAACCGTATAGGGAGTCTTCAACTTCTGGGCATAAGAAAGTTTGCACCACTCGTAAT 240
Query 428 GGTTGGACAGCATTTGTAAAAAGAGTCTCTATGGCTAGTGGAGCAATTAGGAGATTCCAG 487
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 241 GGTTGGACAGCATTTGTAAAAAGAGTCTCTATGGCTACTGGCGCAATTAGGAGATTCCAG 300
Query 488 GAGCGTGTTTTAGGGCCTAATAGGACCGGTCTTCCGAGCACAACTAGTGACGTATGGCTC 547
||||||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||||
Sbjct 301 GAGCGTGTTTTAGGGCCAAATAGGACTGGTCTGCCGAGCACAACAAGTGATGTATGGCTC 360
Query 548 TTGGGTGTCTGCTATAAAATATCTGCGGATGAGAACTCAGGGGAAACCGATACTGGCACT 607
||||||||||| || |||||||| | ||||||| ||| ||||||||| |||||||| |
Sbjct 361 TTGGGTGTCTGTTACAAAATATCCGAGGATGAGGCCTCGGGGGAAACCAATACTGGCTGT 420
Query 608 GTATTGGCTGCATTGCAACTAGATTTTTCATCCAAAATACTGATGACATATCGTAAAGGT 667
|||||||||||||| |||| |||||||||||| ||||||||||||||||| |||| ||||
Sbjct 421 GTATTGGCTGCATTTCAACAAGATTTTTCATCTAAAATACTGATGACATACCGTAGAGGT 480
Query 668 TTTGAACCCTTTAGAGACACAACTTATACCAGCGATGTGAACTGGGGTTGCATGATTCGA 727
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 481 TTTGAACCCTTTAGAGACACAACATATACCAGCGATGTGAACTGGGGTTGCATGATTCGA 540
Query 728 AGTAGCCAGATGCTTTTTGCTCAGGCGTTGCTTTTCCATAGGCTGGGGAGGGCTTGGACT 787
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 541 AGTAGCCAGATGCTTTTTGCTCAGGCGTTGCTTTTCCATAGGGTGGGGAGGTCTTGGACT 600
Query 788 AAGAAATCTGAGCTTCCTGAACAGGAATACTTAGAGACCTTGGAACCTTTTGGTGATTCC 847
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 AAGAAATCTGAGCTGCCTGAACAGGAATACTTAGAGACCTTGGAACCTTTTGGTGATTCC 660
Query 848 GAGCCTTCAGCTTTCTCCATCCACAATCTTATAATAGCTGGAGCGTCCTATGGTCTCGCT 907
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 GAGTCTTCAGCTTTCTCCATCCACAATCTTATAATAGCTGGAGCGTCCTATGGTCTCGCT 720
Query 908 GCTGGGTCATGGGTAGGACCGTATGCCATTTGTCGAGCGTGGGAGTCATTAGCGTGCAAG 967
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct 721 GCTGGGTCATGGGTAGGGCCATATGCCATTTGTCGAGCGTGGGAATCATTAGCGTGCAAG 780
Query 968 AAGAGAAAACAAACTGATTCTAAAAACCAGACGCTTCCTATGGCTGTTCATATCGTTTCT 1027
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 781 AAGAGAAAACAAACTGATTCTAAAAACCAGACGCTTCCTATGGCTGTTCATATTGTTTCT 840
Query 1028 GGCAGCGAAGATGGAGAGAGAGGTGGGGCTCCAATTCTCTGTATAGAAGATGCTACCAAA 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 841 GGCAGCGAAGATGGAGAGAGAGGTGGGGCTCCAATTCTCTGTATAGAAGATGCCACCAAA 900
Query 1088 TCTTGTCTAGAATTCTCAAAAGGACAGTCTGAGTGGACACCGATTATCCTTTTGGTTCCA 1147
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 901 TCTTGTCTAGAATTCTCAAAAGGACAGTCTGAGTGGACACCGATTCTCCTTTTGGTCCCA 960
Query 1148 CTGGTTCTTGGGCTTGACAGTGTGAATCCCAGGTACATTCCATCTCTCGTAGCCACATTC 1207
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 961 CTGGTTCTCGGGCTTGACAGTGTGAATCCCAGGTACATTCCATCTCTCATAGCCACATTC 1020
Query 1208 ACTTTTCCTCAGAGCGTGGGGATTTTGGGTGGCAAACCAGGTGCCTCAACTTACATAGTT 1267
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 ACTTTTCCTCAGAGCGTAGGGATTTTGGGTGGCAAACCAGGTGCCTCAACTTACATAGTT 1080
Query 1268 GGTGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGAAGTTCAACAGGTGGTCACA 1327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 GGTGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGAAGTTCAACAGGTGGTCACA 1140
Query 1328 GTCAACAAGGAAACACCAGATGTTGACACATCCTCCTATCATTGCAATGTCCTTCGTTAT 1387
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1141 GTCAACAAGGAAACACCAGATGTTGACACATCCTCCTATCATTGCAATGTCATTCGTTAT 1200
Query 1388 GTTCCTTTGGAATCACTCGACCCATCTCTAGCTCTAGGATTCTATTGCCGCGACAAAGAT 1447
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1201 GTTCCTTTGGAATCACTCGACCCATCTCTAGCTCTCGGATTCTATTGCCGCGACAAAGAT 1260
Query 1448 GATTTCGACGATTTCTGTCTCCGAGCATTGAAACTAGCTGAGGAATCAAACGGTGCTCCA 1507
||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||
Sbjct 1261 GATTTCGACGACTTCTGTCTCCGAGCATCAAAACTAGCCGAGGATTCAAACGGTGCTCCA 1320
Query 1508 TTGTTCAC-AGTGACTCAAACCCACA-CAGCGATAAACCAAAGCAACTACGGGTTTGCGG 1565
| ||||| | | ||||||||||||| || |||||||||||| ||||||||||||| |||
Sbjct 1321 CTATTCACCA-TAACTCAAACCCACAGCA-CGATAAACCAAAACAACTACGGGTTTTCGG 1378
Query 1566 ATGACGACAGCGAGGATGAACGTGAAGATGACTGGCAAATGCTCTGATCATGATCATCGT 1625
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1379 ATGATGACAGCGAGGATGAACGTGAAGATGACTGGCAAATGCTCTGATCATCATCATC-- 1436
Query 1626 CAAACATTT 1634
||||||||
Sbjct 1437 -AAACATTT 1444
> Ahg483537 jgi|Araly1|483537|fgenesh2_kg.4__2597__AT2G44130.1
Length=1383
Score = 1929 bits (1044), Expect = 0.0
Identities = 1268/1375 (92%), Gaps = 19/1375 (1%)
Strand=Plus/Minus
Query 1673 AACCAGTTCTTTGTTTTTTATATGTGTTGGTGTATATTACATCAGATCAGAACACAATGT 1732
||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct 1383 AACCAGTTCTTTGTTTTTTCTATGTGTTGGTGTAAATTACATCAGATCA-AACACAATGT 1325
Query 1733 TGTACTATAAAATCTTTTGGGATTTTCAAACATAGATTGAAGCATGCGAAAATGGAAGAG 1792
||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 1324 TGTACCATAAAATC-TTT-GGATTTTCAAACATAGATTGAAGCATGTGAAAATGGAAGAG 1267
Query 1793 TAGAGAAATCACAAGGTATATGAACATGATGACTCCATTTTCCCATTTTCTTCTCAGTCG 1852
||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1266 TAGAGAAATCAGAAGGTATGTGAAC---ATGACTCCATTTTCCCATTTTCTTCTCAGTCG 1210
Query 1853 TCATCTTCATCATCACTCCTCCTTCACCTTCACCTTCACTCTCTCTTTTACCGCCAATCA 1912
|||||||||||||||||||||||||||| | | ||||||||||||| ||||||||||
Sbjct 1209 TCATCTTCATCATCACTCCTCCTTCACC-T---C--CACTCTCTCTTTTGCCGCCAATCA 1156
Query 1913 TTACCACCGATTCACCTCCTAAGCTTCCGGCGAAAACTGAGCTTCCTGTCATCGGAAGCT 1972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 TTACCACCGATTCACCTCCTAAGCTTCCGGCGAAAACTGAGCTTCCTGTCATCGGAAGCT 1096
Query 1973 GTATAGATTGAAGATCCAGTTTCAAATTTCTCGAATCATCGTTAGTTTCCCATCGACGTT 2032
||| || || ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1095 GTACAGTTTCAAGATCCAGTTTCCAATTTCTCGAATCATCGTTAGTTTCCCATCGACGTT 1036
Query 2033 CACTCTGTAAATCAGTGTCTGTGAAACACCATAACGTAGAGGAGCTTCTAAAGTCTCCGG 2092
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1035 CACTCTGTAAATCAGTGTCTGTGAAACACCATAACTTAGAGGAGCTTCTAAAGTCTCCGA 976
Query 2093 CGGTGCGACCTCTCGGGCTAGTATCTGGAAATCGCCAGACGTTGTCGATTCTCGACCATG 2152
||||||||||||||||||||||||||||||||| ||||| ||| |||||| | ||||| |
Sbjct 975 CGGTGCGACCTCTCGGGCTAGTATCTGGAAATCTCCAGATGTTTTCGATTTTGGACCAGG 916
Query 2153 AATCTGTCGCTGGATCGTAAATTTCTCCGTCAGATCGGAATCTTCCTTGAGATTCCGTTC 2212
||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 915 AATTTGTAGCTGGCTCGTAAATCTCTCCGTCAGATCGGAATCTTCCTTGAGATTCCGTTC 856
Query 2213 CGTAACCGCTCAGCACGCAAAACCTTAGACCCATACCAACGGCGAATCCTTGACATTCGT 2272
||||||| |||| ||||||||||||||| || |||||| ||||||||||||||||||||
Sbjct 855 CGTAACCACTCAATACGCAAAACCTTAGATCCGTACCAATGGCGAATCCTTGACATTCGT 796
Query 2273 CTCTTCCTTCCGTCATCGGAGTAACCGACGACCACTCGTCTTTCTCGACGTCGTACACCT 2332
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 795 CTCTTCCTTCCGTCATCGGAGGAACCGTCGACCACTCGTCTTTCTCGACGTCGTACACCT 736
Query 2333 CCGCCGAGCGTAAAGCGTTTTTCTGATCGTCGTGACCTCCGGCGACGTATACCTTCGTTG 2392
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 735 CCGCCGAGCGTAAAGCGTTTTTCTGATCGTCGTGACCTCCGGCGACGTATACCTTAGTTG 676
Query 2393 GACTTACGGAGGCGCAGGCGAAGAATGATCGTGATTCCTTCATTGGCGCACCTCGTCTCC 2452
|| ||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||
Sbjct 675 AACCGACGGAGGCGCAAGCGAAGAACGATCGCGATTCCTTCATCGGCGCACCTCGTCTCC 616
Query 2453 ACTTCCTTCCGGCGAATTCCAGAACGTAAACGTCTCTCGTCGGCTGTAACGTCTCCGGAT 2512
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 615 ACTTCCTTCCGGCGAATTCCAGAACGTGAACGTCTCTCGTCGGCTGTAACGTCTCCGGAT 556
Query 2513 CCCAACCGCCGATGAGCAGAATCTTCCCGGCGTCCTGAAGCACGACGCACTCGCAGAAAA 2572
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 555 CCCAACCGCCGATGAGAAGAATCTTCCCGGCGTCCTGAAGCACGACGCACTCGCAGAAAA 496
Query 2573 GCGGGATCTGCTCCTCCTCTGGAAACGCAACGCGATGCCACGTGGACATCGCAGCGTTGT 2632
||||||||||||||||||| |||||||| | ||| ||||||||||||| ||| | |||||
Sbjct 495 GCGGGATCTGCTCCTCCTCGGGAAACGCGATGCGGTGCCACGTGGACAGCGCGGAGTTGT 436
Query 2633 AAACGCTCAATCCAAAACGCGGCGTGCAGAAAACGCGCGGGTGTGACTCATCCTCTGATT 2692
|||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 435 AAACGCTCAATCCAAACCGCGGTGTGCAGAAAACGCGCGGTTGTGACTCATCCTCTGATT 376
Query 2693 TTTTCTCGTCAACCATTAATGTCTCGTCAACCGATTTAGACGCTGGAATTGGCGGCGTTA 2752
| ||| |||| ||||| |||||||| ||||||||||||| |||| |||||||||||| |
Sbjct 375 TCTTCACGTCCACCATAAATGTCTCCCCAACCGATTTAGAAGCTGAAATTGGCGGCGTAA 316
Query 2753 GCGGTTGAACGAGGCAGAGGAGAAGCTCTGTTTTGCCGCATCTCCGCCGTTCTTGGATAA 2812
||||||||||||| |||||||||||||||||||| |||||||| ||| |||| | || |
Sbjct 315 GCGGTTGAACGAGACAGAGGAGAAGCTCTGTTTTACCGCATCTGTGCCTTTCTCGAATGA 256
Query 2813 AAGAAGAGTCGGAGAGTAAGCTACGCCAAGAACGGCAAACGGATCTCATGGCGGATTGGA 2872
|||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||| | |
Sbjct 255 AAGAAGAGTCAGAGAGTAAGCTTCGCCAAGAACGGCAAACAGATTTCATGGCGGATAGAA 196
Query 2873 ATTGGAACGGAACTCTGACCAAACACTCCAAAGCTAGTTCGGAAGGTAAACCGGGAATCA 2932
||||| |||||||||||||||||||||||||||||| ||| || ||||||||||||||||
Sbjct 195 ATTGGTACGGAACTCTGACCAAACACTCCAAAGCTAATTCAGACGGTAAACCGGGAATCA 136
Query 2933 A-T--TCGTGACATTGCTGAAAATCTCCACCTTTCTTTTTCGACACTTCCATAGTCATCG 2989
| | |||||||||| ||| ||||||||| ||||||||||||||||||||||| |||| |
Sbjct 135 AATCGTCGTGACATTTCTGGAAATCTCCAGCTTTCTTTTTCGACACTTCCATAATCATTG 76
Query 2990 AACTTAAACAAGTTTGAGAAAAACAGAACAGAGAGTGTGTTTGATTGAGCAAAGT 3044
||||||| |||||| | ||||| | || |||||| ||||||| |||||||||||
Sbjct 75 AACTTAATCAAGTTAAA-AAAAA-A-AA-AGAGAGCGTGTTTGGTTGAGCAAAGT 25
> Ahg486460 jgi|Araly1|486460|fgenesh2_kg.5__2452__AT3G59950.1
Length=1782
Score = 1216 bits (658), Expect = 0.0
Identities = 1179/1425 (83%), Gaps = 58/1425 (4%)
Strand=Plus/Plus
Query 141 AAGGTTCTCAGGATTTAGGTTGCTTCTATGAGA-AGGACACGTTGCAGTTGGTGCTTCAT 199
||| |||| || | |||| || ||||||||||| | |||| |||||| ||||| ||| ||
Sbjct 212 AAGATTCTGAGTA-TTAGTTTTCTTCTATGAGACA-GACATGTTGCATTTGGTACTTAAT 269
Query 200 GTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCC-TCAACAATGTTCTTCATCAAG 258
| |||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| |
Sbjct 270 GACTAGGTAATGAAGGCTATATGTGATAGATTTGTTCCTTCAA-AATGTTCTTCATCATG 328
Query 259 CA-AGAGTGATACGCATGATAAATCCC---C-T-T-TAGTTTCAGATTC-TGGACCTAGT 310
|| | ||||| | || ||||| ||||| | | | ||||||||||||| | |||||
Sbjct 329 CACA-AGTGAAAAGCGTGATATATCCCAGACATCTCTAGTTTCAGATTCACCG-TCTAGT 386
Query 311 GATAATAAGTCCAAGTTTACCTTATGGTCAAACGTGTTTACGTCTTCTTCCTCAGTTTCT 370
|| || ||||| || || || ||||| || | ||| || ||||||| ||| ||||||||
Sbjct 387 GACAACAAGTCAAACTTGACGTTATGCTCGGATGTGGTTGCGTCTTCCTCCCCAGTTTCT 446
Query 371 CAACCGTATAGGG-AGTCTTCAACTTCTGGGCATAAGCAAGTTTGCACCACTCGTAATGG 429
||||||| ||||| || |||||||||| | |||||||| |||||||||||| | |||| |
Sbjct 447 CAACCGTGTAGGGAAG-CTTCAACTTCCGAGCATAAGCCAGTTTGCACCACACATAATAG 505
Query 430 TTGGACAG-CATTTGTAAAAAGAGTC-TCTATGGCTAGTGGAGCAATTAGGAGATTCCAG 487
|||||||| |||| |||||| || | |||||||||||||| |||||||||||||| ||
Sbjct 506 TTGGACAGTTATTT-TAAAAACAG-CTTCTATGGCTAGTGGGGCAATTAGGAGATTTCAA 563
Query 488 GAGCGTGTTTTAGGGCCTAATAGGACCGGT-CTTCCGAGCACAACTAGTGACG-TATGGC 545
|| ||||| |||||||| | |||||| ||| |||| |||| || ||||| | ||||||
Sbjct 564 GACCGTGTATTAGGGCCGAGTAGGACGGGTATTTCC-AGCAGTACAAGTGA-GATATGGC 621
Query 546 TCTTGGGTGTCTGCTATAAAATATCTGCGGATGAGA-ACTCAGGGGAAACCGATACTGGC 604
|| |||||||||| |||||||| || | || ||| | ||| | ||| | ||| |||||
Sbjct 622 TCCTGGGTGTCTGTTATAAAATCTCAGAGGCTGA-ATCCTCCGAAGAAGCAGATGCTGGC 680
Query 605 AC-TGTATTGGCTGCATTGCA-ACTAGATTTTTCATCCAAAATACTGATGACATATCGTA 662
| ||||||||||||||| || || ||||||||||||| |||||| |||||||||||||
Sbjct 681 -CGTGTATTGGCTGCATT-CAGACAAGATTTTTCATCCTTAATACTAATGACATATCGTA 738
Query 663 AAGGTTTTGAACCCT-TTAGAGACACAACTTATACCAGCGATGTGAACTGGGGTTGCATG 721
|||||||| | ||| || |||||||||||||||| || ||||| |||||||||||||||
Sbjct 739 GAGGTTTTG-AGCCTATTGGAGACACAACTTATACTAGTGATGTAAACTGGGGTTGCATG 797
Query 722 ATTCGAAGTAGCCAGATGCTTTTTGCTCAGGCGTTGCTTTTCCATAGGCTGGGGAGGGCT 781
|||||||| |||||||||| ||||| ||||||||||| ||||| |||||||| ||| ||
Sbjct 798 CTTCGAAGTGGCCAGATGCTCTTTGCACAGGCGTTGCTATTCCAAAGGCTGGGAAGGTCT 857
Query 782 TGGACTAAGAA--A-TCTGAGCTTCCTGAA-CAGGAATACTTAGAGACCTTGGAACCTTT 837
|||| || || | || |||| | | ||| || |||||||||||| ||| |||| |||
Sbjct 858 TGGAGGAAAAAGGATTCCGAGCCTGC-GAATGAGAAATACTTAGAGATCTTAGAACTTTT 916
Query 838 TGGTGATTCCGAGCCTTCAGCTTTCTCCATCCACAATCTTATAATAGCTGGAGCGTCCTA 897
||||||| | ||| ||||||| ||||| || |||||||||||| ||||||||| |||||
Sbjct 917 TGGTGATACTGAGGCTTCAGCATTCTCGATTCACAATCTTATACTAGCTGGAGAATCCTA 976
Query 898 TGGTCTCGCTGCTGGGTCATGGGTAGGACCGTATGCCATTTGTCGAGCGTGGGAGTCATT 957
||| || ||||||||||||||||||||||| ||||| |||||||| | ||||| |||||
Sbjct 977 TGGCCTGGCTGCTGGGTCATGGGTAGGACCATATGCTGTTTGTCGATCATGGGAATCATT 1036
Query 958 AGCGT-GCAAGAAGAGAA-AACAAACTGAT-TCTAAAAACCAGACG-CTTCCTATGGCTG 1013
||| | | ||||| | || || |||||||| | |||| || || || |||| |||||||
Sbjct 1037 AGC-TCGGAAGAACA-AAGAAGAAACTGATGT-TAAACACAAGTCGTTTTCC-ATGGCTG 1092
Query 1014 TTCATATCGTTTCTGGCAGCGAAGATGGAGAGAGAGGTGGGGCTCCAATTCTCTGTATAG 1073
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct 1093 TTCATATCGTTTCTGGCAGTGAAGATGGAGAGAGAGGTGGAGCTCCAATTCTCTGTATTG 1152
Query 1074 AAGATGCT-ACCAAATCTTGTCTAGAATTCTCAAAAGGACAGTCTGAGTGGACACCGATT 1132
|||||| | |||||| ||||| | ||||| ||| |||| | |||||||| | || |||
Sbjct 1153 AAGATG-TCACCAAAACTTGTTTGGAATTTTCAGAAGGGGAAACTGAGTGGCCGCCAATT 1211
Query 1133 ATCCTTTTGGTTCCACTGGTTCTTGGGCTTGACAGTGTGAATCCCAGGTACATTCCATCT 1192
| || ||||| || |||||||| |||||||||| ||||| |||||||||||||| |||
Sbjct 1212 CTTCTCTTGGTCCCTCTGGTTCTCGGGCTTGACAAAGTGAACCCCAGGTACATTCCGTCT 1271
Query 1193 CTCG-TAGCCACATTCACTTTTCCTCAGAGCGTGGGGATTTTGGGTGGCAAACCAGGTGC 1251
|| | ||||||| ||||| || ||||| ||| | || |||||||| ||||||||||||||
Sbjct 1272 CT-GATAGCCACTTTCACATTCCCTCAAAGCCTCGGCATTTTGGGCGGCAAACCAGGTGC 1330
Query 1252 CTCAACTTACATAGTTGGTGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGAAGT 1311
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1331 ATCAACTTACATAGTTGGAGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGATGT 1390
Query 1312 TCAACAGGTGGTCACAGTCAACAAGGAAACACCA-GATGTTGACACATCCTCCTATCATT 1370
||||||||| || |||||||| || |||| | || |||||||||||||| || || ||||
Sbjct 1391 TCAACAGGTAGTGACAGTCAAGAAAGAAA-ATCAAGATGTTGACACATCGTCTTACCATT 1449
Query 1371 GCAATGTCCTTCGTTATGTTCCT-TTGGAATCACTCGACCCATCTCTAGCTCTAGGATTC 1429
||||| ||| ||||||||||| ||| | ||||||||||| || |||||||| ||||||
Sbjct 1450 GCAATACCCTCCGTTATGTTCCGCTTG-AGTCACTCGACCCGTCACTAGCTCTTGGATTC 1508
Query 1430 TATTGCC-GCGACAAAGATGATTTCGACGATTTCTGTCTCCGAGCATTGAAACTAGCTGA 1488
||||||| | ||||||||||||||||| ||||||||| |||||||| ||| ||||| |
Sbjct 1509 TATTGCCAG-GACAAAGATGATTTCGATGATTTCTGTATCCGAGCAACGAAGCTAGCGGG 1567
Query 1489 GGAATCAAACGGTGCTCCAT-TGTTCACAGTGACTCAAACCCACA 1532
||| || || || ||||| | | || || ||||||||| | ||||
Sbjct 1568 GGACTCTAATGGCGCTCC-TCTCTTTACTGTGACTCAATCTCACA 1611
> Ahg935335 jgi|Araly1|935335|scaffold_403323.1
Length=245
Score = 156 bits (84), Expect = 1e-36
Identities = 131/151 (87%), Gaps = 14/151 (9%)
Strand=Plus/Minus
Query 1 AAAGGAAACACACGTT-TGTCTTTGCTCTGAGGTATCTTCGACGGGACGTTGAAGCGAGC 59
|||| ||||||||||| | ||||||||||| |||||||||||||||||||||||||||||
Sbjct 154 AAAGTAAACACACGTTGTTTCTTTGCTCTGCGGTATCTTCGACGGGACGTTGAAGCGAGC 95
Query 60 AAGATACGACACGAAATCGATCT-C--C--C--C---C--TTGCGTTTTCCATCTCCGTC 107
||||||| ||||||||||||||| | | | | | ||||||| ||||||||| ||
Sbjct 94 AAGATACAACACGAAATCGATCTTCTTCTTCTTCTTTCCCTTGCGTTCTCCATCTCCATC 35
Query 108 GTCTGCTGAAACCATTTGATCGATCTCTCAG 138
|||||||||| ||||||||||||||||||||
Sbjct 34 GTCTGCTGAA-CCATTTGATCGATCTCTCAG 5
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121555888162
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5