BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G44470.3 Length=2054 Score E Sequences producing significant alignments: (Bits) Value Ahg483572 jgi|Araly1|483572|fgenesh2_kg.4__2632__AT2G44470.3 2741 0.0 Ahg935381 jgi|Araly1|935381|scaffold_403369.1 1493 0.0 Ahg486481 jgi|Araly1|486481|fgenesh2_kg.5__2473__AT3G60140.1 850 0.0 Ahg925260 jgi|Araly1|925260|scaffold_200821.1 226 5e-58 > Ahg483572 jgi|Araly1|483572|fgenesh2_kg.4__2632__AT2G44470.3 Length=1959 Score = 2741 bits (1484), Expect = 0.0 Identities = 1754/1883 (93%), Gaps = 24/1883 (1%) Strand=Plus/Plus Query 45 AATCGaaaaccaaaaagaaaagaaaaaaaTGAACGTTCAAATTTTCATCCTCCTTTTGAT 104 |||||||||||| |||| |||| |||||||||| || ||| ||||||||||||||||||| Sbjct 27 AATCGAAAACCAGAAAG-AAAG-AAAAAATGAAAGTGCAATTTTTCATCCTCCTTTTGAT 84 Query 105 AATCTCATGGCTTACACCGAAGATTACTTCTCTTCCTCCTGAATCTCAAGTCCTTGATCG 164 ||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| | Sbjct 85 AATCTCATGGCTTACTCCGAAGATTACTTCTCTTCCTCCAGAATCTCAAGTACTTGATAG 144 Query 165 AAGTAGTTTTCCTGATGATTTTGTTTTCGGAACCGCTATATCGGCCTTTCAGAGCGAAGG 224 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 145 AAGTAGTTTTCCTGAAGATTTCGTTTTCGGAACCGCTATATCGGCCTTTCAGAGCGAAGG 204 Query 225 TGCAACAAGCGAAGGTGGAAAATCGCCAACTATTTGGGATTACTTCAGCCACACCTTTCC 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 205 TGCAACAAGCGAAGGTGGAAAATCGCCAACTATTTGGGATTACTTCAGCCACACCTTTCC 264 Query 285 AGAAAGAACCAATATGCAGAATGCAGATGTAGCCGTCGATTTTTACCATCGTTATAAGGA 344 ||||||||||||||||||||||| ||| || ||| |||||||||||||||||| ||||| Sbjct 265 AGAAAGAACCAATATGCAGAATGGAGACGTTGCCACCGATTTTTACCATCGTTACAAGGA 324 Query 345 TGACATCAAATTGATAG-AAGAGCTAAATGTGGACGCTTTCAGATTTTCGATTTCGTGGG 403 ||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||| Sbjct 325 TGACATCAAATTGAT-GAAAGAGTTAAATATGGACGCTTTCAGATTTTCGATTTCGTGGG 383 Query 404 CCAGATTAATACCCAGTGGAAAGGTAAAGGATGGAGTAAACAAAGAAGGTGTACAATTCT 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 384 CCAGATTAATACCCAGTGGAAAGGTAAAGGATGGAGTAAACAAAGAAGGTGTACAATTCT 443 Query 464 ACAAGGCTCTCATAGACGAGCTTATTGCTAATGGCATTCAACCTTCGGTGACTCTCTATC 523 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 444 ACAAGGCTCTCATAGACGAGCTTATTGCTAATGGTATTCAACCTTCGGTGACTCTCTATC 503 Query 524 ATTGGGACCATCCTCAAGCTCTTGAGGACGAGTATGGTGGTTTTTTAAACCCTCAAATAA 583 ||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||| Sbjct 504 ATTGGGACCATCCTCAAGCACTTGAGGACGAGTATGGTGGTTTTTTAAGCCCCCAAATAA 563 Query 584 TAGAAGATTTTCGAAATTTTGCAAGAGTTTGTTTTGAAAATTTCGGAGACAAAGTTAAGA 643 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 564 TAGAAGATTTTCGAAATTTCGCAAGAGTCTGTTTTGAAAATTTCGGAGACAAAGTTAAGA 623 Query 644 TGTGGACAACAATCAACGAGCCTTATGTTATAAGTGTTGCGGGCTACGACACGGGCATCA 703 |||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| || Sbjct 624 TGTGGACAACTATCAACGAGCCTTATGTTATAAGTGTTGCGGGCTATGACACAGGCAACA 683 Query 704 AAGCGGTTGGACGGTGCTCGAAATGGGTGAATAGTCGGTGTCAAGCCGGTGACTCGGCCA 763 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 684 AAGCGGTTGGACGGTGCACGAAATGGGTGAATAGTCGGTGTCAAGCCGGTGACTCGGCCA 743 Query 764 TCGAGCCTTACATTGTATCACATCACCTTCTTCTTTCCCATGCTGCGGCAGTACAAGAGT 823 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 744 TCGAGCCTTACATTGTATCACATCACCTTCTTCTTTGCCATGCTGCGGCAGTACAAGAGT 803 Query 824 TCCGAAATTGTAACAAGACTTTACAAGATGGTAAGATTGGGATAGTGATATCTCCTTGGT 883 |||||||||||||||||||||||| ||||| |||||||||||||||| |||| ||||||| Sbjct 804 TCCGAAATTGTAACAAGACTTTACCAGATGATAAGATTGGGATAGTGTTATCGCCTTGGT 863 Query 884 GGCTTGAGCCTTACGACTCTACATCGTCTGCTGACAAAGAAGCCGTTGAACGAGGCCTTC 943 ||||| ||||||| ||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 864 GGCTTCAGCCTTATGACTCCACATCGTCTGCTGATAAAGAAGCCGTTGAACGAGGCCTTG 923 Query 944 CCTTAGAACTAGAGTGGCATTTAAATCCGGTGATTTACGGAGATTATCCTGAAACAATGA 1003 || ||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 924 CCGTAGAAGTAGATTGGCATTTAAATCCGGTGATTTACGGAAATTATCCTGAAAAAATGA 983 Query 1004 AAAAGCATGTCGGAAATAGATTACCTGCTTTCACACCAGAACAATCAAAGATGTTAATAA 1063 |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 984 AAAAGCATGTGGGACATAGATTACCTGCTTTCACACTAGAACAATCAAAGATGTTAATAA 1043 Query 1064 ATTCATCAGATTTCATTGGAGTAAACTATTATAGCATACACTTCACCGCTCATCTCCCTC 1123 ||||||||||||| |||||| ||||||| ||||| || ||||||||||||| | |||| Sbjct 1044 ATTCATCAGATTTTATTGGAATAAACTACTATAGTGCACGCTTCACCGCTCATATTCCTC 1103 Query 1124 ATATCGATCATACTCGACCTCGATTCAGAACTGATCACCATTTTGAGAAGAAATTAATAA 1183 | || |||| |||| | |||||||||||||||||||| ||||||||||||| | ||| || Sbjct 1104 ACATTGATCCTACTAGGCCTCGATTCAGAACTGATCAGCATTTTGAGAAGAGAGTAACAA 1163 Query 1184 ATCGCAGTAACCACGAAA-CTGGACCAGGAGATGATCGAGGCAAAATTCACTCGCATCCA 1242 |||||||||||||||||| | |||||||| ||||||||||||| ||| |||||| | ||| Sbjct 1164 ATCGCAGTAACCACGAAATC-GGACCAGGGGATGATCGAGGCATAATGCACTCGTACCCA 1222 Query 1243 GAAGGTTTGCGAAGAGTTCTGAACTATATCAAAGATAAATACAATAACCCTATCGTCTAT 1302 ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1223 GAAGGCTTGCGAAGAGTTCTTAACTACATCAAAGATAAATACAATAACCCTATCGTCTAT 1282 Query 1303 GTAAAAGAGAATGGAAT-AGATCACTACGATGATGGTACAAAATCGCGGGAAACAATTCT 1361 |||||||||||||||| | || |||||||||||||||||||||| ||||||||||||| Sbjct 1283 ATAAAAGAGAATGGAATCA-ATGACTACGATGATGGTACAAAATCAAGGGAAACAATTCT 1341 Query 1362 CAAGGACACATTTAGGATAAGCTACCATCAGGACCATCTTAAACAAGTTCACAAAGCTAT 1421 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1342 CAAGGACACATTTAGGATAAGCTACCATCAGGACCATCTTAAACAACTTCACAAAGCTAT 1401 Query 1422 AATAGAGGATGGGTGTGATGTTAGAGGATATTACGTGTGGTCTTTATTCGACAACTTCGA 1481 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1402 AATTGAGGATGGGTGTGATGTTAGAGGATATTACGTGTGGTCTTTATTCGACAACTTCGA 1461 Query 1482 GTGGGAGCATGGATA-TAATTCTAGATTCGGTATGTACTATGTTGACT-TCAAAAACAAT 1539 ||||||||||||||| | | ||||||| ||||||||||||||||||| | |||| |||| Sbjct 1462 GTGGGAGCATGGATACTC-TACTAGATTTGGTATGTACTATGTTGACTATGAAAA-CAAT 1519 Query 1540 CTCCAACGGTATCCTAAAGATTCCGTCAACTGGTTCAAGAAATTCCTCAGTAGACCGGTG 1599 |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| || Sbjct 1520 CTCCAACGGTATCCTAAAGATTCCGTCAACTGGTTCAAGAAATTTCTCAGTAAACCAGTT 1579 Query 1600 GTAAGAAGTGAAGAAACAGAGGATGAAAAAGTATGCAATGTGTCACGCAAGGAAGAAAA- 1658 |||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 1580 GTAAAAAGTGAAGAAACAGAGGATGAAAAAGTATGTGATGTGTCACATAAGGAAGAAAAT 1639 Query 1659 AATTAATAAGGCTTTGGATG-TCTCAGAGGGTTTCAAGACTTCAGTTGATTCTATTGTCA 1717 ||| || ||||||||||||| | |||||||||||| |||||||||||||||||||||| | Sbjct 1640 AAT-AACAAGGCTTTGGATGAT-TCAGAGGGTTTCGAGACTTCAGTTGATTCTATTGTTA 1697 Query 1718 ATCTCATCAAAAACGGATCgagaatagaagaagaagatgatgaagaagagagagaTTTCT 1777 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1698 ATCTCATCAAAAATGGATCGAGAATAGAAGAAGAAGAAGATGAAGAAGAGAGAGATTTCT 1757 Query 1778 GTGCTTTTAAGAATCATAATGATCAGTTGGGTTTCTTTCTGAAGCTACAGAACTCATTGG 1837 ||||||||||||||| |||||||||||| |||||||||||||||| ||| || ||||||| Sbjct 1758 GTGCTTTTAAGAATCCTAATGATCAGTTAGGTTTCTTTCTGAAGCCACAAAAGTCATTGG 1817 Query 1838 GATTCTAGAGAACCTTTT-TGAGGACGATCGAGACTCTTTAGCTTTTCTAGTTGTGCGTG 1896 |||||||||||||||||| | ||||| | || |||| ||||||||||||||||| ||| Sbjct 1818 GATTCTAGAGAACCTTTTGTT-GGACG-T-GA--CTCTCTAGCTTTTCTAGTTGTG-GTG 1871 Query 1897 TTTTAGTAATCTATGTATA-GTA 1918 |||||||||||| |||||| ||| Sbjct 1872 TTTTAGTAATCTTTGTATAAGTA 1894 > Ahg935381 jgi|Araly1|935381|scaffold_403369.1 Length=1780 Score = 1493 bits (808), Expect = 0.0 Identities = 1439/1734 (83%), Gaps = 81/1734 (5%) Strand=Plus/Plus Query 57 aaaagaaaagaaaaaaaTGAACG-TTCAAATTTTCATCCTCCTTTTGATAATCTCATGGC 115 |||| |||| ||||| ||||| | | ||| |||||||||||||| | |||||||||||| Sbjct 7 AAAA-AAAA-AAAAATATGAA-GATGCAATTTTTCATCCTCCTTATCATAATCTCATGGT 63 Query 116 TTACACCGAAGATTACTTCTCTTCCTCCTGAATCTCAAGTCCTTGATCG-AAGTAGTTTT 174 || | |||||||||||| |||||||||||||||||||| || ||||| | | ||||| Sbjct 64 TTTCGGAGAAGATTACTTCACTTCCTCCTGAATCTCAAGTACTCGATCGTCA-TGGTTTT 122 Query 175 CCTGATGATTTTGTTTTCGGAACCGCTATATCGGCCTTTCAG-AGCGAAGGTGCAACAAG 233 || ||| |||||||||| ||||| ||| |||||| |||||| | ||||||||||||||| Sbjct 123 CCCGATAATTTTGTTTTTGGAACAGCTGCATCGGCTTTTCAGTA-CGAAGGTGCAACAAG 181 Query 234 CGAAGGTGGAAAATCGCCAACTATTTGGGATTACTTCAGCCACACCTTTCCAGAAAGAAC 293 |||||||| ||||| ||| |||| |||||||||||||||||||| |||||||| ||||| Sbjct 182 TGAAGGTGGGAAATCTCCAGCTATATGGGATTACTTCAGCCACACTTTTCCAGAGAGAAC 241 Query 294 CAATATGCAGAATGCAGATGTAGCCGTCGATTTTTACCATCGTTATAAGGATGACATCAA 353 || |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 242 CAGGATGCAGAATGCAGATGTAGCGGTCGACTTTTACCATCGTTATAAGGATGACATCAA 301 Query 354 ATTGATAG-AAGAGCTAAATGTGGACGCTTTCAGATTTTCGATTTCGTGGGCCAGATTAA 412 ||||| | |||| |||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 302 GTTGAT-GAAAGACCTAAATATGGACGCTTTCAGATTTTCGATTTCGTGGGCGAGATTAA 360 Query 413 TACCCAGTGGAAAGGTAAAGGATGGAGTAAACAAAGAAGGTGTACAATTCTACAAGGCTC 472 ||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||| Sbjct 361 TACCCAGTGGAAAAGTAAAGGATGGAGTTAACCAAGAAGGTGTACAATTCTATAAGGCTC 420 Query 473 TCATAGACGAGCTTATTGCTAATGGCATTCAACCTTCGGTGACTCTCTATCATTGGGACC 532 |||| |||||||| |||| |||||||||||||| ||| |||| ||||| |||||||||| Sbjct 421 TCATCGACGAGCTCGTTGCGAATGGCATTCAACCATCGATGACCCTCTACCATTGGGACC 480 Query 533 ATCCTCAAGCTCTTGAGGACGAGTATGGTGGTTTTTTAAACCCTCAAATAATAGAAGATT 592 |||||||||| |||||||||||||||||||| ||||||| ||| |||||| ||||||||| Sbjct 481 ATCCTCAAGCACTTGAGGACGAGTATGGTGGGTTTTTAAGCCCCCAAATAGTAGAAGATT 540 Query 593 TTCGAAATTTTGCAAGAGTTTGTTTTGAA-AATTTCGGAGACAAAGTTAAGATGTGGACA 651 ||||| ||||| ||||||| ||||||||| |||| ||||||||||||||| |||||||| Sbjct 541 TTCGAGATTTTTCAAGAGTATGTTTTGAAGAATT-CGGAGACAAAGTTAAAATGTGGACT 599 Query 652 ACAATCAACGAGCCTTATGTTATAAGTGTTGCGGGCTACGACACGGGCATCAAAGCGGTT 711 ||||| |||||||||||||| |||| ||||||||||||||| ||||| | ||||||||| Sbjct 600 ACAATAAACGAGCCTTATGTCATAACTGTTGCGGGCTACGATACGGGAAACAAAGCGGTG 659 Query 712 GGACGGTGCTCGAAATGGGTGAATAGTCGGTGTCAAGCCGGTGACTC-GGCCATCGAGCC 770 ||||| ||||||||||||||||||||| |||||||| ||| || || || | |||||| Sbjct 660 GGACGATGCTCGAAATGGGTGAATAGTAAGTGTCAAGGCGGCGATTCAGGT-ACCGAGCC 718 Query 771 TTACATTGTATCACATCACCTTCTTCTTTCCCATGCTGCGGCAGTACAAGAGTTCCGAAA 830 ||||||| ||||||||||||||||||| | ||||| || || ||||||||||||||||| Sbjct 719 CTACATTGCATCACATCACCTTCTTCTTGCTCATGCCGCAGCTGTACAAGAGTTCCGAAA 778 Query 831 TTGTAACAAGACTTTACAAGATGGT-AAGATTGGGATAGTGATATCTCCTTGGTGGCTTG 889 |||||||||||| ||||| ||| || |||||||||||| ||||||||| |||| ||| Sbjct 779 ATGTAACAAGACT---CAAGACGGTCAA-ATTGGGATAGTGTTATCTCCTTTGTGGTTTG 834 Query 890 AGCCTTACGACTCTACATCGTC-TGCTGACAAAGAAGCCGTTGAACGAGGC-CTT-CC-C 945 |||||||||||||| | || || | | || || ||||| ||| |||||| | ||| || | Sbjct 835 AGCCTTACGACTCTGCTTC-TCCTTCCGATAACGAAGCTGTTAAACGAG-CTCTTGCCAC 892 Query 946 TTAGAACTAGAGTGGCATTTAAATCCGGTGATTTACGGAGATTATCCTGAAACAATGAA- 1004 | |||||||| ||||||||| |||| || ||| ||||||||||||| |||| ||||| Sbjct 893 T--GAACTAGATTGGCATTTAGATCCAGTTATTCACGGAGATTATCCAGAAATGATGAAG 950 Query 1005 AAAGCAT-GTCGGAAATAGATTACCTGCTTTCACACCAGAACAATC-AAAGATGTT-AAT 1061 ||| | | | |||||||||||||||| ||||||| ||||||||||| ||| ||||| || Sbjct 951 AAA-C-TCGCCGGAAATAGATTACCTTCTTTCACTCCAGAACAATCCAAA-ATGTTGAA- 1006 Query 1062 AAATTCATCAGATTTCATTGGAGTAAACTATTATAGCATACAC-TTCACC--GCTCATCT 1118 ||||||||| |||||||||||| ||||||| |||| || || | || || |||||| | Sbjct 1007 AAATTCATCCGATTTCATTGGAATAAACTACTATA-CA-ACGCGTT-ACGTTGCTCATAT 1063 Query 1119 CCCTCATATCGATCATACTCGACCTCGATTCAG-AACTGATCACCATTTTGAGAAGAA-A 1176 || || |||| | | |||| || ||||| | ||| ||||| || | | | | | | Sbjct 1064 TCCACACCTCGACCCTGCTCGTCCACGATTT-GTAACCGATCATCAGCTCCA-ATGGAGA 1121 Query 1177 TTAATAAATCGCAGTAACCACGAAA-CTGGACCAGGAGATGATCGAGGCAAAATTCACTC 1235 ||| ||||| |||||| ||| ||| | |||||||| || |||||||||| | | || || Sbjct 1122 GTAACAAATCACAGTAATCACCAAATC-GGACCAGGGGAAGATCGAGGCATACTCCAATC 1180 Query 1236 GCATCCAGAAGGTTTGCGAAGAGTTCTGAACTATATCAAAGATAAATACAATAACCCTAT 1295 |||||||||||||| |||| |||||| ||||| |||||||||||||||||||||||||| Sbjct 1181 ACATCCAGAAGGTTTACGAAAAGTTCTTAACTACATCAAAGATAAATACAATAACCCTAT 1240 Query 1296 CGTCTATGTAAAAGAGAATGGAAT-AGATCACTACGATGATGGTACAAAATCGCGGGAA- 1353 || ||| |||||||||| ||||| | || ||||||| |||||||||||||| || || Sbjct 1241 AGTTTATATAAAAGAGAACGGAATCA-ATGACTACGACGATGGTACAAAATCACGAGAGG 1299 Query 1354 ACAATTCTCAAGGACACATTTAGGATAAGCTACCATCAGGACCATCTTAAACAAGTTCAC 1413 | | ||||||| || ||||||||||||||||||||| |||||||||| ||||| | || Sbjct 1300 ATA-TTCTCAATGATACATTTAGGATAAGCTACCATGAGGACCATCTCCAACAACTCCAA 1358 Query 1414 AAAGCTATAATAGAGGATGGGTGTGATGTTAGAGGATATTACGTGTGGTCTTTATTCGAC 1473 |||||||||||||||||||| ||||| || |||||||||||||||||||||||| | ||| Sbjct 1359 AAAGCTATAATAGAGGATGGATGTGACGTCAGAGGATATTACGTGTGGTCTTTACTAGAC 1418 Query 1474 AACTTCGAGTGGGAGCATGGATATAATTCTAGATTCGGTATGTACTATGTTGACTTCAAA 1533 || ||||||||||| ||||||||| | ||||||| ||| ||||||||||||||| | | Sbjct 1419 AATTTCGAGTGGGAACATGGATATTCTACTAGATTTGGTCTGTACTATGTTGACTACGAC 1478 Query 1534 AACAATCTC-CAACGGTAT-CCTAAAGATTCCGTCAACTGGTTCAAGAAATTCCTCAGTA 1591 ||| ||||| | || ||| || |||||||| || |||||||||||| | || ||| | | Sbjct 1479 AACGATCTCACT-CG-TATTCCCAAAGATTCTGTTAACTGGTTCAAGCAGTTTCTC-G-A 1534 Query 1592 GACCGGTGGTAA-GAAGTGAAGAAACAGAGGATGAAA-AAGTATGCAATGTGTCAC--GC 1647 | ||| ||| |||||||||| | |||||| || |||| || ||||| | Sbjct 1535 T-----T--TAAAGAA-TGAAGAAACAAATGATGAAGGAA-TATGGGATTTGTCAAATG- 1584 Query 1648 A-AGG--A-A-GAAAAAA--T-TAATAAGGCTTTGGATG-TCTCAGAGGGTTTCAAGACT 1698 | ||| | | ||| ||| | ||||||| |||| |||| | ||||| ||||| || | Sbjct 1585 AGAGGTCACATGAAGAAAGGTATAATAAGACTTTCGATGAT-TCAGAAAGTTTCGAGGCA 1643 Query 1699 TCAGTTGATTCTATTGTCAATCTCATCAAAAACGGATCgagaatagaagaagaa 1752 || |||| ||| ||| || |||| || | ||| |||||||| |||||||||| Sbjct 1644 TCTGTTGGTTCGATTCTCTATCTAATGACCAACATATCGAGAAGAGAAGAAGAA 1697 > Ahg486481 jgi|Araly1|486481|fgenesh2_kg.5__2473__AT3G60140.1 Length=1820 Score = 850 bits (460), Expect = 0.0 Identities = 1134/1451 (78%), Gaps = 80/1451 (6%) Strand=Plus/Plus Query 168 TAGTTTTCCTGATGATTTTGT-TTTCGGAACCGCTATATCGGCCTTTCAG-AGCGAAGGT 225 |||||||||||||||||| | ||| ||||| ||| ||||| |||||| | ||||||| Sbjct 158 TAGTTTTCCTGATGATTTCATCTTT-GGAACAGCTGCCTCGGCGTTTCAGTA-CGAAGGT 215 Query 226 GCAACAAGCGAAGGTGGAAAATCGCCAACTATTTGGGATTACTTCAGCCACACCTTTCCA 285 ||||||| |||||||| || || |||||||| |||||| ||||||||| ||| | |||| Sbjct 216 GCAACAAATGAAGGTGGCAAGTCTCCAACTATATGGGATCACTTCAGCCGCACGTATCCA 275 Query 286 GAAAGAACCAATATGCAGAATGCAGATGTAGCCGTCGATTTTTACCATCGTTATAAGGAT 345 ||||| ||||| ||||| ||||| |||||||| | ||||||||||||||||| |||||| Sbjct 276 GAAAGGACCAAAATGCATAATGCTGATGTAGCAATTGATTTTTACCATCGTTACAAGGAT 335 Query 346 GACATCAAATTGATAGAA-GAGCTAAATGTGGACGCTTTCAGATTTTCGATTTCGTGGGC 404 || || |||||||| ||| || ||||| ||||||||||| |||| || || |||||| | Sbjct 336 GATATTAAATTGAT-GAAGGAACTAAACATGGACGCTTTCCGATTCTCAATCTCGTGGTC 394 Query 405 CAGATTAATACCCAGTGGAAAGGTAAAGGATGGAGTAAACAAAGAAGGTGTACAATTCTA 464 | ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||| || Sbjct 395 CCGATTAATTCCCAGTGGAAAGCTAAAGGATGGAGTAAACAAAGAAGGTGTAAAATTTTA 454 Query 465 CAAGGCTCTCATAGACGAGCTTATTGCTAATGGCATTCAACCTTCGGTGACTCTCTATCA 524 ||||| |||||||||||| ||| ||||||||| ||| ||||||||| |||| |||||||| Sbjct 455 CAAGGATCTCATAGACGAACTTCTTGCTAATGACATACAACCTTCGATGACGCTCTATCA 514 Query 525 TTGGGACCATCCTCAAGCTCTTG-AGGACGAGTATGGTGGTTTTTTAAACCCTCAAATAA 583 ||||||||| || ||| || ||| ||||||| |||||||| ||| ||| |||| |||| Sbjct 515 TTGGGACCACCCACAATCT-TTGGAGGACGAATATGGTGGCTTTCTAAGCCCTAAAATCG 573 Query 584 TAGAAGATTTTCGAAATTTTGCAAGAGTTTGTTTTGAAAA-TTTCGGAGACAAAGTTAAG 642 |||||||||||||| | ||||||||| ||||||||||| | ||| ||||| ||||||||| Sbjct 574 TAGAAGATTTTCGAGACTTTGCAAGAATTTGTTTTGAAGAGTTT-GGAGATAAAGTTAAG 632 Query 643 ATGTGGACAACAATCAACGAGCCTTATGTTATAAGTGTTGCGGGCTACGA-CACGGGCAT 701 ||||||||||| |||||||| ||||| |||| | ||||||||| || || || || | Sbjct 633 ATGTGGACAACTATCAACGAACCTTACATTATGACTGTTGCGGGTTATGATCAAGGTAA- 691 Query 702 CAAAGCGGTTGGACGGTGCTCGAAATGGGTGAAT-AGTCGGTGTCAAGCCGGTGACTCG- 759 ||| |||| |||| | |||||||||||||| ||| | | ||||| || || || ||| Sbjct 692 CAAGGCGGCTGGAAGATGCTCGAAATGGGTAAATGAAAAG-TGTCAGGCTGGCGATTCGA 750 Query 760 GC-CATCGAGCCTTACATTGTATCACATCAC-CTTCTTCTTTCCCATGCTGCGGCAGTAC 817 | | | |||||||||||||| ||||| ||| || |||||| ||||||| || |||||| Sbjct 751 GTAC-T-GAGCCTTACATTGTTTCACACCACACT-CTTCTTGCCCATGCCGCTGCAGTAG 807 Query 818 AAGAGTTCCGAAATTGTAACAAGACTTTACAAGATGGT-AAGATTGGGATAGTGA-TATC 875 |||| |||||||| || || || |||| || ||||| || ||||||||||| | | || Sbjct 808 AAGAATTCCGAAAATGCAAAAAAACTTCGCATGATGGCCAA-ATTGGGATAGT-ACTGTC 865 Query 876 TCCTTGGTGGCTT-GAGCCTTACGACTCT-ACATCGTCTG-CTGACAAAGAAGCCGTTGA 932 || | ||| || ||||||||| | || || || ||| | || |||||||| | ||| Sbjct 866 ACCAAGATGG-TTCGAGCCTTACCATTCAGAC-TCAACTGAC-GATAAAGAAGCAGCTGA 922 Query 933 ACGAGGCC-TTCCCTTAGAACTAG-AGTGGCAT-TTAAATCCGGTGATTTACGGAGATTA 989 | ||| || || |||| ||| | | | |||||| || | |||||| ||| |||||||||| Sbjct 923 AGGAG-CCATTGCCTTTGAAATTGGA-TGGCATCTTGA-TCCGGTCATTCACGGAGATTA 979 Query 990 TCCTGAAACAATGAAAAAGCATGTCGG-AAATAGATTACCTGC-TTTCACACCAGAACAA 1047 ||| || | | |||||| ||| ||| ||||| ||||||| | ||| || ||||| | Sbjct 980 TCCAGAGATTGTAAAAAAGTATG-CGGGAAATAAATTACCTTCGTTT-ACTGCAGAAGAG 1037 Query 1048 TCAAAGATGTTAATAAATTCATCAGATTTCATTGG-AGTAAACTATTATA-G-CATACAC 1104 ||||||||||||| ||||||||||||||| | || | |||| || |||| | | | | Sbjct 1038 TCAAAGATGTTAAAAAATTCATCAGATTTTGTCGGCA-TAAATTACTATACGGCG--CGC 1094 Query 1105 TTCACCGCTCATCTCCCTCATATCGATCAT-ACTCGACCTCGATTCA-GAACTGATCACC 1162 ||| | |||||||| | ||| || || | | | |||||| |||| || |||| |||| Sbjct 1095 TTCGCTGCTCATCTTCATCACATAGACCCTGAAAA-ACCTCGGTTCAAGA-CTGACCACC 1152 Query 1163 ATTTTGAGAA-G-AAATTAA-TAAATCGCAGTAACCACGAA-A-CTGGACCAGGAGATGA 1217 || | | ||| | ||| | | ||| || |||| ||| | | | ||||| || || || Sbjct 1153 ATGT-G-GAATGGAAACTGACTAA-TCACAGTGGTCAC-ATCATC-GGACCTGGGGAAGA 1207 Query 1218 TCGAGGCAAAATTCACT--CGCATCCAGAAGGTTTGCGAAGAGTTCTGAACTATATCAAA 1275 | ||| || | | | || || ||||| | |||| |||||| |||||||||||| Sbjct 1208 AAGGGGCTTC-TT-ATTTTCACACCCGGAAGGCCTACGAAAAGTTCTAAACTATATCAAA 1265 Query 1276 GATAAATACAATAACCCTATC-GTCTATGTAAAAGAGAATGGAAT-AGATCACTACGATG 1333 || |||||||||||| | | ||||| | ||||| |||||||| | || || |||| | Sbjct 1266 GACAAATACAATAACA-TGCCAGTCTACATCAAAGAAAATGGAATTA-ATGACAACGACG 1323 Query 1334 ATGGTACAAAATCGCGGGAA-ACAATTCTCAAGGACACATTTAGGAT--AAGCTACCATC 1390 | ||||||||| | | ||| | | || | ||||||||||||||||| || |||||| Sbjct 1324 ACGGTACAAAACCAAGAGAAGAGA-TTGTTAAGGACACATTTAGGATTGAA--TACCATA 1380 Query 1391 AGGAC-CATCTTA-AACAAGTTCACAAAGCTATAATAGAGGATGGGTGTGATGTTAGAGG 1448 || || ||| || || || |||||||||||||| | || ||||||||||| || ||||| Sbjct 1381 AG-ACACAT-TTCGAAGAACTTCACAAAGCTATAGTGGAAGATGGGTGTGACGTGAGAGG 1438 Query 1449 ATATTACGTGTGGTCTTT-ATTCGACAACTTCGAGTGGGAGCATGGATATAATTCTAGAT 1507 ||| |||| ||||| || || ||||| || || ||||| |||||||| | | |||||| Sbjct 1439 ATACTACGCATGGTCATTGATG-GACAATTTTGAATGGGAACATGGATACACTGCTAGAT 1497 Query 1508 TCGGTATGTACTATGTTGACTTCAAAAACAATCTCCAACGGTATCCTAAAGATTCCGTCA 1567 | ||| |||||||||||||||| || |||| |||| ||||| |||||||| |||| Sbjct 1498 TTGGTCTGTACTATGTTGACTTTGTCAATGGTCTCAAACGTTATCCAAAAGATTCGGTCA 1557 Query 1568 ACTGGTTCAAG 1578 | ||||| ||| Sbjct 1558 AATGGTTTAAG 1568 > Ahg925260 jgi|Araly1|925260|scaffold_200821.1 Length=383 Score = 226 bits (122), Expect = 5e-58 Identities = 188/219 (86%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 960 GCATTTAAATCCGGTGATTTACGGAGATTATCCTGAAACAATGAAAAAGCATGTCGGAAA 1019 ||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| || | Sbjct 32 GCATTTACATCCGGTGATTTACGGAGATTATCCTGAAATAATGAAAAAACATGTTGGGCA 91 Query 1020 TA-GATTACCTGCTTTCACACCAGAACAATCAAAGATGTTAATAAATTCAT-CAGATTTC 1077 || | | ||| |||||||||||||||||||||||||||| ||||| |||| | |||||| Sbjct 92 TAAGCTC-CCTTCTTTCACACCAGAACAATCAAAGATGTTGATAAACTCATTC-GATTTC 149 Query 1078 ATTGGAGTAAACTATTATAGCA-TAC-ACTTCACCGCTCATCTCCCTCATATCGATCATA 1135 |||||| |||||||||||||| | | | | |||||||||||| ||||| || |||| | Sbjct 150 ATTGGAATAAACTATTATAGCGCT-CGA-TACACCGCTCATCTTCCTCACATTGATCCTG 207 Query 1136 CTCGACCTCGATTCAGAACTGATCACCATTTTGAGAAGA 1174 |||| ||||||||||||||||||| ||||||||| ||| Sbjct 208 GTCGAGCTCGATTCAGAACTGATCAACATTTTGAGGAGA 246 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77247016860 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5