BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT2G44470.3
Length=2054
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483572 jgi|Araly1|483572|fgenesh2_kg.4__2632__AT2G44470.3 2741 0.0
Ahg935381 jgi|Araly1|935381|scaffold_403369.1 1493 0.0
Ahg486481 jgi|Araly1|486481|fgenesh2_kg.5__2473__AT3G60140.1 850 0.0
Ahg925260 jgi|Araly1|925260|scaffold_200821.1 226 5e-58
> Ahg483572 jgi|Araly1|483572|fgenesh2_kg.4__2632__AT2G44470.3
Length=1959
Score = 2741 bits (1484), Expect = 0.0
Identities = 1754/1883 (93%), Gaps = 24/1883 (1%)
Strand=Plus/Plus
Query 45 AATCGaaaaccaaaaagaaaagaaaaaaaTGAACGTTCAAATTTTCATCCTCCTTTTGAT 104
|||||||||||| |||| |||| |||||||||| || ||| |||||||||||||||||||
Sbjct 27 AATCGAAAACCAGAAAG-AAAG-AAAAAATGAAAGTGCAATTTTTCATCCTCCTTTTGAT 84
Query 105 AATCTCATGGCTTACACCGAAGATTACTTCTCTTCCTCCTGAATCTCAAGTCCTTGATCG 164
||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |
Sbjct 85 AATCTCATGGCTTACTCCGAAGATTACTTCTCTTCCTCCAGAATCTCAAGTACTTGATAG 144
Query 165 AAGTAGTTTTCCTGATGATTTTGTTTTCGGAACCGCTATATCGGCCTTTCAGAGCGAAGG 224
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 145 AAGTAGTTTTCCTGAAGATTTCGTTTTCGGAACCGCTATATCGGCCTTTCAGAGCGAAGG 204
Query 225 TGCAACAAGCGAAGGTGGAAAATCGCCAACTATTTGGGATTACTTCAGCCACACCTTTCC 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 205 TGCAACAAGCGAAGGTGGAAAATCGCCAACTATTTGGGATTACTTCAGCCACACCTTTCC 264
Query 285 AGAAAGAACCAATATGCAGAATGCAGATGTAGCCGTCGATTTTTACCATCGTTATAAGGA 344
||||||||||||||||||||||| ||| || ||| |||||||||||||||||| |||||
Sbjct 265 AGAAAGAACCAATATGCAGAATGGAGACGTTGCCACCGATTTTTACCATCGTTACAAGGA 324
Query 345 TGACATCAAATTGATAG-AAGAGCTAAATGTGGACGCTTTCAGATTTTCGATTTCGTGGG 403
||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 325 TGACATCAAATTGAT-GAAAGAGTTAAATATGGACGCTTTCAGATTTTCGATTTCGTGGG 383
Query 404 CCAGATTAATACCCAGTGGAAAGGTAAAGGATGGAGTAAACAAAGAAGGTGTACAATTCT 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 CCAGATTAATACCCAGTGGAAAGGTAAAGGATGGAGTAAACAAAGAAGGTGTACAATTCT 443
Query 464 ACAAGGCTCTCATAGACGAGCTTATTGCTAATGGCATTCAACCTTCGGTGACTCTCTATC 523
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 444 ACAAGGCTCTCATAGACGAGCTTATTGCTAATGGTATTCAACCTTCGGTGACTCTCTATC 503
Query 524 ATTGGGACCATCCTCAAGCTCTTGAGGACGAGTATGGTGGTTTTTTAAACCCTCAAATAA 583
||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||
Sbjct 504 ATTGGGACCATCCTCAAGCACTTGAGGACGAGTATGGTGGTTTTTTAAGCCCCCAAATAA 563
Query 584 TAGAAGATTTTCGAAATTTTGCAAGAGTTTGTTTTGAAAATTTCGGAGACAAAGTTAAGA 643
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 564 TAGAAGATTTTCGAAATTTCGCAAGAGTCTGTTTTGAAAATTTCGGAGACAAAGTTAAGA 623
Query 644 TGTGGACAACAATCAACGAGCCTTATGTTATAAGTGTTGCGGGCTACGACACGGGCATCA 703
|||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||| ||
Sbjct 624 TGTGGACAACTATCAACGAGCCTTATGTTATAAGTGTTGCGGGCTATGACACAGGCAACA 683
Query 704 AAGCGGTTGGACGGTGCTCGAAATGGGTGAATAGTCGGTGTCAAGCCGGTGACTCGGCCA 763
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 AAGCGGTTGGACGGTGCACGAAATGGGTGAATAGTCGGTGTCAAGCCGGTGACTCGGCCA 743
Query 764 TCGAGCCTTACATTGTATCACATCACCTTCTTCTTTCCCATGCTGCGGCAGTACAAGAGT 823
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 744 TCGAGCCTTACATTGTATCACATCACCTTCTTCTTTGCCATGCTGCGGCAGTACAAGAGT 803
Query 824 TCCGAAATTGTAACAAGACTTTACAAGATGGTAAGATTGGGATAGTGATATCTCCTTGGT 883
|||||||||||||||||||||||| ||||| |||||||||||||||| |||| |||||||
Sbjct 804 TCCGAAATTGTAACAAGACTTTACCAGATGATAAGATTGGGATAGTGTTATCGCCTTGGT 863
Query 884 GGCTTGAGCCTTACGACTCTACATCGTCTGCTGACAAAGAAGCCGTTGAACGAGGCCTTC 943
||||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 864 GGCTTCAGCCTTATGACTCCACATCGTCTGCTGATAAAGAAGCCGTTGAACGAGGCCTTG 923
Query 944 CCTTAGAACTAGAGTGGCATTTAAATCCGGTGATTTACGGAGATTATCCTGAAACAATGA 1003
|| ||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 924 CCGTAGAAGTAGATTGGCATTTAAATCCGGTGATTTACGGAAATTATCCTGAAAAAATGA 983
Query 1004 AAAAGCATGTCGGAAATAGATTACCTGCTTTCACACCAGAACAATCAAAGATGTTAATAA 1063
|||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 984 AAAAGCATGTGGGACATAGATTACCTGCTTTCACACTAGAACAATCAAAGATGTTAATAA 1043
Query 1064 ATTCATCAGATTTCATTGGAGTAAACTATTATAGCATACACTTCACCGCTCATCTCCCTC 1123
||||||||||||| |||||| ||||||| ||||| || ||||||||||||| | ||||
Sbjct 1044 ATTCATCAGATTTTATTGGAATAAACTACTATAGTGCACGCTTCACCGCTCATATTCCTC 1103
Query 1124 ATATCGATCATACTCGACCTCGATTCAGAACTGATCACCATTTTGAGAAGAAATTAATAA 1183
| || |||| |||| | |||||||||||||||||||| ||||||||||||| | ||| ||
Sbjct 1104 ACATTGATCCTACTAGGCCTCGATTCAGAACTGATCAGCATTTTGAGAAGAGAGTAACAA 1163
Query 1184 ATCGCAGTAACCACGAAA-CTGGACCAGGAGATGATCGAGGCAAAATTCACTCGCATCCA 1242
|||||||||||||||||| | |||||||| ||||||||||||| ||| |||||| | |||
Sbjct 1164 ATCGCAGTAACCACGAAATC-GGACCAGGGGATGATCGAGGCATAATGCACTCGTACCCA 1222
Query 1243 GAAGGTTTGCGAAGAGTTCTGAACTATATCAAAGATAAATACAATAACCCTATCGTCTAT 1302
||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1223 GAAGGCTTGCGAAGAGTTCTTAACTACATCAAAGATAAATACAATAACCCTATCGTCTAT 1282
Query 1303 GTAAAAGAGAATGGAAT-AGATCACTACGATGATGGTACAAAATCGCGGGAAACAATTCT 1361
|||||||||||||||| | || |||||||||||||||||||||| |||||||||||||
Sbjct 1283 ATAAAAGAGAATGGAATCA-ATGACTACGATGATGGTACAAAATCAAGGGAAACAATTCT 1341
Query 1362 CAAGGACACATTTAGGATAAGCTACCATCAGGACCATCTTAAACAAGTTCACAAAGCTAT 1421
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1342 CAAGGACACATTTAGGATAAGCTACCATCAGGACCATCTTAAACAACTTCACAAAGCTAT 1401
Query 1422 AATAGAGGATGGGTGTGATGTTAGAGGATATTACGTGTGGTCTTTATTCGACAACTTCGA 1481
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1402 AATTGAGGATGGGTGTGATGTTAGAGGATATTACGTGTGGTCTTTATTCGACAACTTCGA 1461
Query 1482 GTGGGAGCATGGATA-TAATTCTAGATTCGGTATGTACTATGTTGACT-TCAAAAACAAT 1539
||||||||||||||| | | ||||||| ||||||||||||||||||| | |||| ||||
Sbjct 1462 GTGGGAGCATGGATACTC-TACTAGATTTGGTATGTACTATGTTGACTATGAAAA-CAAT 1519
Query 1540 CTCCAACGGTATCCTAAAGATTCCGTCAACTGGTTCAAGAAATTCCTCAGTAGACCGGTG 1599
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||
Sbjct 1520 CTCCAACGGTATCCTAAAGATTCCGTCAACTGGTTCAAGAAATTTCTCAGTAAACCAGTT 1579
Query 1600 GTAAGAAGTGAAGAAACAGAGGATGAAAAAGTATGCAATGTGTCACGCAAGGAAGAAAA- 1658
|||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 1580 GTAAAAAGTGAAGAAACAGAGGATGAAAAAGTATGTGATGTGTCACATAAGGAAGAAAAT 1639
Query 1659 AATTAATAAGGCTTTGGATG-TCTCAGAGGGTTTCAAGACTTCAGTTGATTCTATTGTCA 1717
||| || ||||||||||||| | |||||||||||| |||||||||||||||||||||| |
Sbjct 1640 AAT-AACAAGGCTTTGGATGAT-TCAGAGGGTTTCGAGACTTCAGTTGATTCTATTGTTA 1697
Query 1718 ATCTCATCAAAAACGGATCgagaatagaagaagaagatgatgaagaagagagagaTTTCT 1777
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1698 ATCTCATCAAAAATGGATCGAGAATAGAAGAAGAAGAAGATGAAGAAGAGAGAGATTTCT 1757
Query 1778 GTGCTTTTAAGAATCATAATGATCAGTTGGGTTTCTTTCTGAAGCTACAGAACTCATTGG 1837
||||||||||||||| |||||||||||| |||||||||||||||| ||| || |||||||
Sbjct 1758 GTGCTTTTAAGAATCCTAATGATCAGTTAGGTTTCTTTCTGAAGCCACAAAAGTCATTGG 1817
Query 1838 GATTCTAGAGAACCTTTT-TGAGGACGATCGAGACTCTTTAGCTTTTCTAGTTGTGCGTG 1896
|||||||||||||||||| | ||||| | || |||| ||||||||||||||||| |||
Sbjct 1818 GATTCTAGAGAACCTTTTGTT-GGACG-T-GA--CTCTCTAGCTTTTCTAGTTGTG-GTG 1871
Query 1897 TTTTAGTAATCTATGTATA-GTA 1918
|||||||||||| |||||| |||
Sbjct 1872 TTTTAGTAATCTTTGTATAAGTA 1894
> Ahg935381 jgi|Araly1|935381|scaffold_403369.1
Length=1780
Score = 1493 bits (808), Expect = 0.0
Identities = 1439/1734 (83%), Gaps = 81/1734 (5%)
Strand=Plus/Plus
Query 57 aaaagaaaagaaaaaaaTGAACG-TTCAAATTTTCATCCTCCTTTTGATAATCTCATGGC 115
|||| |||| ||||| ||||| | | ||| |||||||||||||| | ||||||||||||
Sbjct 7 AAAA-AAAA-AAAAATATGAA-GATGCAATTTTTCATCCTCCTTATCATAATCTCATGGT 63
Query 116 TTACACCGAAGATTACTTCTCTTCCTCCTGAATCTCAAGTCCTTGATCG-AAGTAGTTTT 174
|| | |||||||||||| |||||||||||||||||||| || ||||| | | |||||
Sbjct 64 TTTCGGAGAAGATTACTTCACTTCCTCCTGAATCTCAAGTACTCGATCGTCA-TGGTTTT 122
Query 175 CCTGATGATTTTGTTTTCGGAACCGCTATATCGGCCTTTCAG-AGCGAAGGTGCAACAAG 233
|| ||| |||||||||| ||||| ||| |||||| |||||| | |||||||||||||||
Sbjct 123 CCCGATAATTTTGTTTTTGGAACAGCTGCATCGGCTTTTCAGTA-CGAAGGTGCAACAAG 181
Query 234 CGAAGGTGGAAAATCGCCAACTATTTGGGATTACTTCAGCCACACCTTTCCAGAAAGAAC 293
|||||||| ||||| ||| |||| |||||||||||||||||||| |||||||| |||||
Sbjct 182 TGAAGGTGGGAAATCTCCAGCTATATGGGATTACTTCAGCCACACTTTTCCAGAGAGAAC 241
Query 294 CAATATGCAGAATGCAGATGTAGCCGTCGATTTTTACCATCGTTATAAGGATGACATCAA 353
|| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 242 CAGGATGCAGAATGCAGATGTAGCGGTCGACTTTTACCATCGTTATAAGGATGACATCAA 301
Query 354 ATTGATAG-AAGAGCTAAATGTGGACGCTTTCAGATTTTCGATTTCGTGGGCCAGATTAA 412
||||| | |||| |||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 302 GTTGAT-GAAAGACCTAAATATGGACGCTTTCAGATTTTCGATTTCGTGGGCGAGATTAA 360
Query 413 TACCCAGTGGAAAGGTAAAGGATGGAGTAAACAAAGAAGGTGTACAATTCTACAAGGCTC 472
||||||||||||| |||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct 361 TACCCAGTGGAAAAGTAAAGGATGGAGTTAACCAAGAAGGTGTACAATTCTATAAGGCTC 420
Query 473 TCATAGACGAGCTTATTGCTAATGGCATTCAACCTTCGGTGACTCTCTATCATTGGGACC 532
|||| |||||||| |||| |||||||||||||| ||| |||| ||||| ||||||||||
Sbjct 421 TCATCGACGAGCTCGTTGCGAATGGCATTCAACCATCGATGACCCTCTACCATTGGGACC 480
Query 533 ATCCTCAAGCTCTTGAGGACGAGTATGGTGGTTTTTTAAACCCTCAAATAATAGAAGATT 592
|||||||||| |||||||||||||||||||| ||||||| ||| |||||| |||||||||
Sbjct 481 ATCCTCAAGCACTTGAGGACGAGTATGGTGGGTTTTTAAGCCCCCAAATAGTAGAAGATT 540
Query 593 TTCGAAATTTTGCAAGAGTTTGTTTTGAA-AATTTCGGAGACAAAGTTAAGATGTGGACA 651
||||| ||||| ||||||| ||||||||| |||| ||||||||||||||| ||||||||
Sbjct 541 TTCGAGATTTTTCAAGAGTATGTTTTGAAGAATT-CGGAGACAAAGTTAAAATGTGGACT 599
Query 652 ACAATCAACGAGCCTTATGTTATAAGTGTTGCGGGCTACGACACGGGCATCAAAGCGGTT 711
||||| |||||||||||||| |||| ||||||||||||||| ||||| | |||||||||
Sbjct 600 ACAATAAACGAGCCTTATGTCATAACTGTTGCGGGCTACGATACGGGAAACAAAGCGGTG 659
Query 712 GGACGGTGCTCGAAATGGGTGAATAGTCGGTGTCAAGCCGGTGACTC-GGCCATCGAGCC 770
||||| ||||||||||||||||||||| |||||||| ||| || || || | ||||||
Sbjct 660 GGACGATGCTCGAAATGGGTGAATAGTAAGTGTCAAGGCGGCGATTCAGGT-ACCGAGCC 718
Query 771 TTACATTGTATCACATCACCTTCTTCTTTCCCATGCTGCGGCAGTACAAGAGTTCCGAAA 830
||||||| ||||||||||||||||||| | ||||| || || |||||||||||||||||
Sbjct 719 CTACATTGCATCACATCACCTTCTTCTTGCTCATGCCGCAGCTGTACAAGAGTTCCGAAA 778
Query 831 TTGTAACAAGACTTTACAAGATGGT-AAGATTGGGATAGTGATATCTCCTTGGTGGCTTG 889
|||||||||||| ||||| ||| || |||||||||||| ||||||||| |||| |||
Sbjct 779 ATGTAACAAGACT---CAAGACGGTCAA-ATTGGGATAGTGTTATCTCCTTTGTGGTTTG 834
Query 890 AGCCTTACGACTCTACATCGTC-TGCTGACAAAGAAGCCGTTGAACGAGGC-CTT-CC-C 945
|||||||||||||| | || || | | || || ||||| ||| |||||| | ||| || |
Sbjct 835 AGCCTTACGACTCTGCTTC-TCCTTCCGATAACGAAGCTGTTAAACGAG-CTCTTGCCAC 892
Query 946 TTAGAACTAGAGTGGCATTTAAATCCGGTGATTTACGGAGATTATCCTGAAACAATGAA- 1004
| |||||||| ||||||||| |||| || ||| ||||||||||||| |||| |||||
Sbjct 893 T--GAACTAGATTGGCATTTAGATCCAGTTATTCACGGAGATTATCCAGAAATGATGAAG 950
Query 1005 AAAGCAT-GTCGGAAATAGATTACCTGCTTTCACACCAGAACAATC-AAAGATGTT-AAT 1061
||| | | | |||||||||||||||| ||||||| ||||||||||| ||| ||||| ||
Sbjct 951 AAA-C-TCGCCGGAAATAGATTACCTTCTTTCACTCCAGAACAATCCAAA-ATGTTGAA- 1006
Query 1062 AAATTCATCAGATTTCATTGGAGTAAACTATTATAGCATACAC-TTCACC--GCTCATCT 1118
||||||||| |||||||||||| ||||||| |||| || || | || || |||||| |
Sbjct 1007 AAATTCATCCGATTTCATTGGAATAAACTACTATA-CA-ACGCGTT-ACGTTGCTCATAT 1063
Query 1119 CCCTCATATCGATCATACTCGACCTCGATTCAG-AACTGATCACCATTTTGAGAAGAA-A 1176
|| || |||| | | |||| || ||||| | ||| ||||| || | | | | | |
Sbjct 1064 TCCACACCTCGACCCTGCTCGTCCACGATTT-GTAACCGATCATCAGCTCCA-ATGGAGA 1121
Query 1177 TTAATAAATCGCAGTAACCACGAAA-CTGGACCAGGAGATGATCGAGGCAAAATTCACTC 1235
||| ||||| |||||| ||| ||| | |||||||| || |||||||||| | | || ||
Sbjct 1122 GTAACAAATCACAGTAATCACCAAATC-GGACCAGGGGAAGATCGAGGCATACTCCAATC 1180
Query 1236 GCATCCAGAAGGTTTGCGAAGAGTTCTGAACTATATCAAAGATAAATACAATAACCCTAT 1295
|||||||||||||| |||| |||||| ||||| ||||||||||||||||||||||||||
Sbjct 1181 ACATCCAGAAGGTTTACGAAAAGTTCTTAACTACATCAAAGATAAATACAATAACCCTAT 1240
Query 1296 CGTCTATGTAAAAGAGAATGGAAT-AGATCACTACGATGATGGTACAAAATCGCGGGAA- 1353
|| ||| |||||||||| ||||| | || ||||||| |||||||||||||| || ||
Sbjct 1241 AGTTTATATAAAAGAGAACGGAATCA-ATGACTACGACGATGGTACAAAATCACGAGAGG 1299
Query 1354 ACAATTCTCAAGGACACATTTAGGATAAGCTACCATCAGGACCATCTTAAACAAGTTCAC 1413
| | ||||||| || ||||||||||||||||||||| |||||||||| ||||| | ||
Sbjct 1300 ATA-TTCTCAATGATACATTTAGGATAAGCTACCATGAGGACCATCTCCAACAACTCCAA 1358
Query 1414 AAAGCTATAATAGAGGATGGGTGTGATGTTAGAGGATATTACGTGTGGTCTTTATTCGAC 1473
|||||||||||||||||||| ||||| || |||||||||||||||||||||||| | |||
Sbjct 1359 AAAGCTATAATAGAGGATGGATGTGACGTCAGAGGATATTACGTGTGGTCTTTACTAGAC 1418
Query 1474 AACTTCGAGTGGGAGCATGGATATAATTCTAGATTCGGTATGTACTATGTTGACTTCAAA 1533
|| ||||||||||| ||||||||| | ||||||| ||| ||||||||||||||| | |
Sbjct 1419 AATTTCGAGTGGGAACATGGATATTCTACTAGATTTGGTCTGTACTATGTTGACTACGAC 1478
Query 1534 AACAATCTC-CAACGGTAT-CCTAAAGATTCCGTCAACTGGTTCAAGAAATTCCTCAGTA 1591
||| ||||| | || ||| || |||||||| || |||||||||||| | || ||| | |
Sbjct 1479 AACGATCTCACT-CG-TATTCCCAAAGATTCTGTTAACTGGTTCAAGCAGTTTCTC-G-A 1534
Query 1592 GACCGGTGGTAA-GAAGTGAAGAAACAGAGGATGAAA-AAGTATGCAATGTGTCAC--GC 1647
| ||| ||| |||||||||| | |||||| || |||| || ||||| |
Sbjct 1535 T-----T--TAAAGAA-TGAAGAAACAAATGATGAAGGAA-TATGGGATTTGTCAAATG- 1584
Query 1648 A-AGG--A-A-GAAAAAA--T-TAATAAGGCTTTGGATG-TCTCAGAGGGTTTCAAGACT 1698
| ||| | | ||| ||| | ||||||| |||| |||| | ||||| ||||| || |
Sbjct 1585 AGAGGTCACATGAAGAAAGGTATAATAAGACTTTCGATGAT-TCAGAAAGTTTCGAGGCA 1643
Query 1699 TCAGTTGATTCTATTGTCAATCTCATCAAAAACGGATCgagaatagaagaagaa 1752
|| |||| ||| ||| || |||| || | ||| |||||||| ||||||||||
Sbjct 1644 TCTGTTGGTTCGATTCTCTATCTAATGACCAACATATCGAGAAGAGAAGAAGAA 1697
> Ahg486481 jgi|Araly1|486481|fgenesh2_kg.5__2473__AT3G60140.1
Length=1820
Score = 850 bits (460), Expect = 0.0
Identities = 1134/1451 (78%), Gaps = 80/1451 (6%)
Strand=Plus/Plus
Query 168 TAGTTTTCCTGATGATTTTGT-TTTCGGAACCGCTATATCGGCCTTTCAG-AGCGAAGGT 225
|||||||||||||||||| | ||| ||||| ||| ||||| |||||| | |||||||
Sbjct 158 TAGTTTTCCTGATGATTTCATCTTT-GGAACAGCTGCCTCGGCGTTTCAGTA-CGAAGGT 215
Query 226 GCAACAAGCGAAGGTGGAAAATCGCCAACTATTTGGGATTACTTCAGCCACACCTTTCCA 285
||||||| |||||||| || || |||||||| |||||| ||||||||| ||| | ||||
Sbjct 216 GCAACAAATGAAGGTGGCAAGTCTCCAACTATATGGGATCACTTCAGCCGCACGTATCCA 275
Query 286 GAAAGAACCAATATGCAGAATGCAGATGTAGCCGTCGATTTTTACCATCGTTATAAGGAT 345
||||| ||||| ||||| ||||| |||||||| | ||||||||||||||||| ||||||
Sbjct 276 GAAAGGACCAAAATGCATAATGCTGATGTAGCAATTGATTTTTACCATCGTTACAAGGAT 335
Query 346 GACATCAAATTGATAGAA-GAGCTAAATGTGGACGCTTTCAGATTTTCGATTTCGTGGGC 404
|| || |||||||| ||| || ||||| ||||||||||| |||| || || |||||| |
Sbjct 336 GATATTAAATTGAT-GAAGGAACTAAACATGGACGCTTTCCGATTCTCAATCTCGTGGTC 394
Query 405 CAGATTAATACCCAGTGGAAAGGTAAAGGATGGAGTAAACAAAGAAGGTGTACAATTCTA 464
| ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||| ||
Sbjct 395 CCGATTAATTCCCAGTGGAAAGCTAAAGGATGGAGTAAACAAAGAAGGTGTAAAATTTTA 454
Query 465 CAAGGCTCTCATAGACGAGCTTATTGCTAATGGCATTCAACCTTCGGTGACTCTCTATCA 524
||||| |||||||||||| ||| ||||||||| ||| ||||||||| |||| ||||||||
Sbjct 455 CAAGGATCTCATAGACGAACTTCTTGCTAATGACATACAACCTTCGATGACGCTCTATCA 514
Query 525 TTGGGACCATCCTCAAGCTCTTG-AGGACGAGTATGGTGGTTTTTTAAACCCTCAAATAA 583
||||||||| || ||| || ||| ||||||| |||||||| ||| ||| |||| ||||
Sbjct 515 TTGGGACCACCCACAATCT-TTGGAGGACGAATATGGTGGCTTTCTAAGCCCTAAAATCG 573
Query 584 TAGAAGATTTTCGAAATTTTGCAAGAGTTTGTTTTGAAAA-TTTCGGAGACAAAGTTAAG 642
|||||||||||||| | ||||||||| ||||||||||| | ||| ||||| |||||||||
Sbjct 574 TAGAAGATTTTCGAGACTTTGCAAGAATTTGTTTTGAAGAGTTT-GGAGATAAAGTTAAG 632
Query 643 ATGTGGACAACAATCAACGAGCCTTATGTTATAAGTGTTGCGGGCTACGA-CACGGGCAT 701
||||||||||| |||||||| ||||| |||| | ||||||||| || || || || |
Sbjct 633 ATGTGGACAACTATCAACGAACCTTACATTATGACTGTTGCGGGTTATGATCAAGGTAA- 691
Query 702 CAAAGCGGTTGGACGGTGCTCGAAATGGGTGAAT-AGTCGGTGTCAAGCCGGTGACTCG- 759
||| |||| |||| | |||||||||||||| ||| | | ||||| || || || |||
Sbjct 692 CAAGGCGGCTGGAAGATGCTCGAAATGGGTAAATGAAAAG-TGTCAGGCTGGCGATTCGA 750
Query 760 GC-CATCGAGCCTTACATTGTATCACATCAC-CTTCTTCTTTCCCATGCTGCGGCAGTAC 817
| | | |||||||||||||| ||||| ||| || |||||| ||||||| || ||||||
Sbjct 751 GTAC-T-GAGCCTTACATTGTTTCACACCACACT-CTTCTTGCCCATGCCGCTGCAGTAG 807
Query 818 AAGAGTTCCGAAATTGTAACAAGACTTTACAAGATGGT-AAGATTGGGATAGTGA-TATC 875
|||| |||||||| || || || |||| || ||||| || ||||||||||| | | ||
Sbjct 808 AAGAATTCCGAAAATGCAAAAAAACTTCGCATGATGGCCAA-ATTGGGATAGT-ACTGTC 865
Query 876 TCCTTGGTGGCTT-GAGCCTTACGACTCT-ACATCGTCTG-CTGACAAAGAAGCCGTTGA 932
|| | ||| || ||||||||| | || || || ||| | || |||||||| | |||
Sbjct 866 ACCAAGATGG-TTCGAGCCTTACCATTCAGAC-TCAACTGAC-GATAAAGAAGCAGCTGA 922
Query 933 ACGAGGCC-TTCCCTTAGAACTAG-AGTGGCAT-TTAAATCCGGTGATTTACGGAGATTA 989
| ||| || || |||| ||| | | | |||||| || | |||||| ||| ||||||||||
Sbjct 923 AGGAG-CCATTGCCTTTGAAATTGGA-TGGCATCTTGA-TCCGGTCATTCACGGAGATTA 979
Query 990 TCCTGAAACAATGAAAAAGCATGTCGG-AAATAGATTACCTGC-TTTCACACCAGAACAA 1047
||| || | | |||||| ||| ||| ||||| ||||||| | ||| || ||||| |
Sbjct 980 TCCAGAGATTGTAAAAAAGTATG-CGGGAAATAAATTACCTTCGTTT-ACTGCAGAAGAG 1037
Query 1048 TCAAAGATGTTAATAAATTCATCAGATTTCATTGG-AGTAAACTATTATA-G-CATACAC 1104
||||||||||||| ||||||||||||||| | || | |||| || |||| | | | |
Sbjct 1038 TCAAAGATGTTAAAAAATTCATCAGATTTTGTCGGCA-TAAATTACTATACGGCG--CGC 1094
Query 1105 TTCACCGCTCATCTCCCTCATATCGATCAT-ACTCGACCTCGATTCA-GAACTGATCACC 1162
||| | |||||||| | ||| || || | | | |||||| |||| || |||| ||||
Sbjct 1095 TTCGCTGCTCATCTTCATCACATAGACCCTGAAAA-ACCTCGGTTCAAGA-CTGACCACC 1152
Query 1163 ATTTTGAGAA-G-AAATTAA-TAAATCGCAGTAACCACGAA-A-CTGGACCAGGAGATGA 1217
|| | | ||| | ||| | | ||| || |||| ||| | | | ||||| || || ||
Sbjct 1153 ATGT-G-GAATGGAAACTGACTAA-TCACAGTGGTCAC-ATCATC-GGACCTGGGGAAGA 1207
Query 1218 TCGAGGCAAAATTCACT--CGCATCCAGAAGGTTTGCGAAGAGTTCTGAACTATATCAAA 1275
| ||| || | | | || || ||||| | |||| |||||| ||||||||||||
Sbjct 1208 AAGGGGCTTC-TT-ATTTTCACACCCGGAAGGCCTACGAAAAGTTCTAAACTATATCAAA 1265
Query 1276 GATAAATACAATAACCCTATC-GTCTATGTAAAAGAGAATGGAAT-AGATCACTACGATG 1333
|| |||||||||||| | | ||||| | ||||| |||||||| | || || |||| |
Sbjct 1266 GACAAATACAATAACA-TGCCAGTCTACATCAAAGAAAATGGAATTA-ATGACAACGACG 1323
Query 1334 ATGGTACAAAATCGCGGGAA-ACAATTCTCAAGGACACATTTAGGAT--AAGCTACCATC 1390
| ||||||||| | | ||| | | || | ||||||||||||||||| || ||||||
Sbjct 1324 ACGGTACAAAACCAAGAGAAGAGA-TTGTTAAGGACACATTTAGGATTGAA--TACCATA 1380
Query 1391 AGGAC-CATCTTA-AACAAGTTCACAAAGCTATAATAGAGGATGGGTGTGATGTTAGAGG 1448
|| || ||| || || || |||||||||||||| | || ||||||||||| || |||||
Sbjct 1381 AG-ACACAT-TTCGAAGAACTTCACAAAGCTATAGTGGAAGATGGGTGTGACGTGAGAGG 1438
Query 1449 ATATTACGTGTGGTCTTT-ATTCGACAACTTCGAGTGGGAGCATGGATATAATTCTAGAT 1507
||| |||| ||||| || || ||||| || || ||||| |||||||| | | ||||||
Sbjct 1439 ATACTACGCATGGTCATTGATG-GACAATTTTGAATGGGAACATGGATACACTGCTAGAT 1497
Query 1508 TCGGTATGTACTATGTTGACTTCAAAAACAATCTCCAACGGTATCCTAAAGATTCCGTCA 1567
| ||| |||||||||||||||| || |||| |||| ||||| |||||||| ||||
Sbjct 1498 TTGGTCTGTACTATGTTGACTTTGTCAATGGTCTCAAACGTTATCCAAAAGATTCGGTCA 1557
Query 1568 ACTGGTTCAAG 1578
| ||||| |||
Sbjct 1558 AATGGTTTAAG 1568
> Ahg925260 jgi|Araly1|925260|scaffold_200821.1
Length=383
Score = 226 bits (122), Expect = 5e-58
Identities = 188/219 (86%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 960 GCATTTAAATCCGGTGATTTACGGAGATTATCCTGAAACAATGAAAAAGCATGTCGGAAA 1019
||||||| |||||||||||||||||||||||||||||| ||||||||| ||||| || |
Sbjct 32 GCATTTACATCCGGTGATTTACGGAGATTATCCTGAAATAATGAAAAAACATGTTGGGCA 91
Query 1020 TA-GATTACCTGCTTTCACACCAGAACAATCAAAGATGTTAATAAATTCAT-CAGATTTC 1077
|| | | ||| |||||||||||||||||||||||||||| ||||| |||| | ||||||
Sbjct 92 TAAGCTC-CCTTCTTTCACACCAGAACAATCAAAGATGTTGATAAACTCATTC-GATTTC 149
Query 1078 ATTGGAGTAAACTATTATAGCA-TAC-ACTTCACCGCTCATCTCCCTCATATCGATCATA 1135
|||||| |||||||||||||| | | | | |||||||||||| ||||| || |||| |
Sbjct 150 ATTGGAATAAACTATTATAGCGCT-CGA-TACACCGCTCATCTTCCTCACATTGATCCTG 207
Query 1136 CTCGACCTCGATTCAGAACTGATCACCATTTTGAGAAGA 1174
|||| ||||||||||||||||||| ||||||||| |||
Sbjct 208 GTCGAGCTCGATTCAGAACTGATCAACATTTTGAGGAGA 246
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77247016860
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5