BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G44550.1 Length=1473 Score E Sequences producing significant alignments: (Bits) Value Ahg346267 jgi|Araly1|346267|fgenesh1_pg.C_scaffold_4002609 2455 0.0 Ahg935393 jgi|Araly1|935393|scaffold_403381.1 2134 0.0 Ahg483586 jgi|Araly1|483586|fgenesh2_kg.4__2646__AT2G44570.1 1133 0.0 > Ahg346267 jgi|Araly1|346267|fgenesh1_pg.C_scaffold_4002609 Length=1473 Score = 2455 bits (1329), Expect = 0.0 Identities = 1425/1471 (97%), Gaps = 8/1471 (1%) Strand=Plus/Plus Query 1 ATGTCTCAATTGAAAAATGGATCTTCACAATGCTTATGGACAAGTATTTGCATTGTGTTA 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 1 ATGTCTCAATTGAAAAATGGATCTTCACAATACTTATGGACAAGTATTTGCATGGTGTTA 60 Query 61 ATAGTAATGTCGATGGCTCGTGAAGCTGTCTCTACAAATTATGCAGAAGCTCTCAAAAAC 120 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 61 CTAGTAATGTCGATGGCTCGTGAAGCTGTCTCTACAAATTATGGAGAAGCTCTCAGAAAC 120 Query 121 AGTCTTTTGTATTTCGAAGCTCAACGTTCTGGAAAATTGCCTCCGAACCAAAGAGTTACT 180 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 121 AGTCTTTTGTATTTCGAAGCTCAACGTTCTGGAAAATTGCCTTCGAACCAAAGAGTTACT 180 Query 181 TGGAGAGGAGATTCTGCTCTTAGAGACGGTTCTGATGCTCATATTGATCTCACCGGAGGG 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 181 TGGAGAGGAGATTCTGCTCTTAGAGACGGTTCTGATGCTCATATCGATCTCACCGGTGGG 240 Query 241 TACTATGATGCGGGAGACAACATGAAGTTTGGATTTCCGTTGGCGTTCACGACAACAATG 300 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TACTATGATGCCGGAGACAACATGAAGTTTGGATTTCCGTTGGCGTTCACGACAACAATG 300 Query 301 CTAGCTTGGAGCAATATAGAGATGGCATCACAGCTTAGGGCCCACCACGAGAAGGGAAAC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CTAGCTTGGAGCAATATAGAGATGGCATCACAGCTTAGGGCCCACCACGAGAAGGGAAAC 360 Query 361 GCTCTCAGGGCTCTCAAGTGGGCCACCGATTATCTCATTAAAGCCCATCCTCAGCCTAAT 420 |||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| Sbjct 361 TCTCTCAGGGCTCTCAAGTGGGCCACCGATTTTCTCATTAAAGCCCATCCTGAGCCCAAT 420 Query 421 GTCCTGTACGGACAAGTGGGTGAAGGAAACTCGGACCACAAATGCTGGATGAGACCTGAG 480 || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 421 GTTCTGTACGGACAAGTGGGTGAGGGAAACTCGGACCACAAATGCTGGATGAGACCTGAG 480 Query 481 GATATGACCACTCCGCGTACTTCATACCGCATCGATGCTCAACATCCAGGTTCTGACCTA 540 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 481 GATATGACCACTCCGCGTACTTCATTTCGCATCGATGCTCAACATCCAGGTTCTGACCTA 540 Query 541 GCAGGTGAGACAGCTGCAGCAATGGCGGCAGCGTCTATCGCCTTTGCACCATCTGATAAA 600 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 541 GCAGGTGAGACAGCTGCAGCAATGGCTGCAGCGTCTATCGCCTTTGCACCATCTGATAAA 600 Query 601 GCCTATG-CCAATATACTCATTGGTCATGCAAAAGATTTATTTGCATTCGCTAAGGCTCA 659 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GCCTATGCCCAA-ATACTCATTGGTCATGCAAAAGATTTATTTGCATTCGCTAAGGCTCA 659 Query 660 CCGTGGAC-TTTACCAAAACTCCATTCCTAACGCGGGTGGCTTCTACGCGAGCAGTGGAT 718 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 CCGTGG-CGTTTACCAAAACTCCATTCCTAACGCGGGTGGCTTCTACGCGAGCAGTGGAT 718 Query 719 ATGAAGATGAGTTGCTGTGGGCTGCAGCTTGGCTCCACCGTGCCACCAACGACCAGATTT 778 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 ACGAAGATGAGTTGCTGTGGGCTGCAGCTTGGCTCCACCGTGCCACCAACGACCAGATTT 778 Query 779 ATCTTGATTACCTAACAGAAGCAGAAACAGGAGGTCCAAGGACTGTTTTTGCCTGGGATG 838 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 779 ATCTTGATTACCTAACACAAGCAGAAACAGGAGGTCCAAGGACTGTTTTTGCCTGGGATG 838 Query 839 ATAAGTTCGTGGGTGCACAAGTCTTGGTCGCCAAGCTAGCACTTGAAGGGAAAGTAGAGA 898 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 839 ATAAGTTCGTGGGTGCACAAGTCTTGGTCGCCAAGCTTGCACTTGAAGGGAAAGTAGAGA 898 Query 899 GCAGTGAACAGATCGTAGAGTACAAGAGTATGGCGGAGCAGTTTATCTGCAACTGTGCTC 958 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 899 GCAGTGAAGAGATCGTAGAGTACAAGAGTATGGCGGAGCAGTTTATCTGCAACTGTGCTC 958 Query 959 AAAAAGGTGACAACAACGTTAAGAAAACCCCTGGCGGTTTGCTCTACTTCTTGCCGTGGA 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 959 AAAAAGGTGACAACAACGTTAAGAAAACCCCTGGCGGTTTGCTCTACTTCTTGCCGTGGA 1018 Query 1019 ACAACCTCCAATACACCACAGCCGCTACTTTCGTCCTCTCAGCATATTCTAAATATCTTG 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1019 ACAACCTCCAATACACCACAGCCGCTACTTTCGTCCTCTCAGCATATTCTAAATATCTTG 1078 Query 1079 AAGCCGCAAAAGCCTCCATCGACTGTCCCGATGGTGCTCTTCAAGCTTCTGATCTTCTCC 1138 |||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct 1079 AAGCCGCAAAAGCCTCCATCAACTGCCCCAATGGTGCTCTTCAAGCTTCTGATCTTCTCC 1138 Query 1139 AAGTCGCTCGTTCCCAGGTTGACTATATACTTGGGTCGAACCCCCAGAAAATGAGCTACA 1198 | |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| Sbjct 1139 ACCTCGCTCGTTCCCAGGTAGACTATATACTTGGGTCGAACCCCAAGAACATGAGCTACA 1198 Query 1199 TGGTTGGAGTTGGGACCAATTATCCCAAAAAACCACACCATAGAGCAGCCTCCATAGTAT 1258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1199 TGGTTGGAGTTGGGACCAATTATCCCAAAAAACCACACCATAGAGCAGCCTCCATAGTAT 1258 Query 1259 CGATCAGACA-GGACAAAACACCAGTGACGTGTAGTGGAGGGTATGA-TAAATGGTATAA 1316 | || | ||| |||||||||||||||||| ||||||||||||| | | | ||||||||| Sbjct 1259 CAAT-ACACAAGGACAAAACACCAGTGACTTGTAGTGGAGGGT-TCAATGCATGGTATAA 1316 Query 1317 CAATCCTGCACCAAACCCTAACGTTTTAGCGGGAGCAGTTGTCGGAGGACCCGACGATAA 1376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1317 CAATCCTGCACCAAACCCTAACGTTTTAGCGGGAGCAGTTGTCGGAGGACCCGACGATAA 1376 Query 1377 CGATGTTTATGGAGATGAGAGGAGTAATTTCCAGCAAGCTGAGCCTGCGACGGTCACTAC 1436 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1377 CGATGTTTATGGAGATGAGAGGACTAATTTCCAGCAAGCTGAGCCTGCGACGGTCACTGC 1436 Query 1437 TGCTCCGCTTGTTGGTGTCTTGGCCCTCGTT 1467 ||||||||||||||||||||||||||||||| Sbjct 1437 TGCTCCGCTTGTTGGTGTCTTGGCCCTCGTT 1467 > Ahg935393 jgi|Araly1|935393|scaffold_403381.1 Length=1516 Score = 2134 bits (1155), Expect = 0.0 Identities = 1367/1469 (93%), Gaps = 15/1469 (1%) Strand=Plus/Plus Query 1 ATGTCTCAATTGAAAAATGGATCTTCACAATGCTTATGGACAAGTATTTGCATTGTGTTA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21 ATGTCTCAATTGAAAAATGGATCTTCACAATGCTTATGGACAAGTATTTGCATTGTGTTA 80 Query 61 ATAGTAATGTCGATGGCTCGTGAAGCTGTCTCTACAAATTATGCAGAAGCTCTCAAAAAC 120 ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| ||| Sbjct 81 ATAGTAATGTCGACGGCTCGTGGAGCTGTCTCTACAAATTATGGAGAAGCTCTCACAAAG 140 Query 121 AGTCTTTTGTATTTCGAAGCTCAACGTTCTGGAAAATTGCCTCCGAACCAAAGAGTTACT 180 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 141 AGTCTTTTGTATTTCGAAGCTCAACGTTCTGGAAAATTGCCTTCGAACCAAAGAGTTACT 200 Query 181 TGGAGAGGAGATTCTGCTCTTAGAGACGGTTCTGATGCTCATATTGATCTCACCGGAGGG 240 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct 201 TGGAGAGGAGATTCTGCTCTTAGAGATGGTTCTGATGCTCATGTTGATCTCACCGGAGGG 260 Query 241 TACTATGATGCGGGAGACAACATGAAGTTTGGATTTCCGTTGGCGTTCACGACAACAATG 300 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 261 TACTATGATGCTGGAGACAACATGAAGTTTGGATTTCCGTTGGCGTTCATGACAACAATG 320 Query 301 CTAGCTTGGAGCAATATAGAGATGGCATCACAGCTTAGGGCCCACCACGAGAAGGGAAAC 360 ||||||||||||||||||||||||||||||||||||| |||||| || ||| ||| |||| Sbjct 321 CTAGCTTGGAGCAATATAGAGATGGCATCACAGCTTAAGGCCCATCAGGAGCAGGAAAAC 380 Query 361 GCTCTCAG-GGCTCTCAAGTGGGCCACCGATTATCTCATTAAAGCCCATCCTCAGCCTAA 419 || || | ||||||||||||||||||||||| ||||||||||||||||||| |||| || Sbjct 381 GCCCTT-GCGGCTCTCAAGTGGGCCACCGATTTTCTCATTAAAGCCCATCCTGAGCCCAA 439 Query 420 TGTCCTGTACGGACAAGTGGGTGAAGGAAACTCGGACCACAAATGCTGGATGAGACCTGA 479 |||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 440 TGTCTTGTACGGACAAGTGGGTGACGGAAACTCGGACCACGGATGCTGGATGAGACCTGA 499 Query 480 GGATATGACCACTCCGCGTACTTCATACCGCATCGATGCTCAACATCCAGGTTCTGACCT 539 ||||||||||||||| ||| |||||| ||||| |||||||||||||||||||| ||||| Sbjct 500 GGATATGACCACTCCACGTCCTTCATTTCGCATTGATGCTCAACATCCAGGTTCAGACCT 559 Query 540 AGCAGGTGAGACAGCTGCAGCAATGGCGGCAGCGTCTATCGCCTTTGCACCATCTGATAA 599 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct 560 AGCAGGTGAGACAGCTGCAGCAATGGCTGCAGCGTCTATTGCCTTTGCACCATCTGATGA 619 Query 600 AGCCTATGCCAATATACTCATTGGTCATGCAAAAGATTTATTTGCATTCGCTAAGGC-TC 658 |||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||| | Sbjct 620 AGCCTATGCCAAAATACTTATTGGTCATGCGAAAGATTTATTTGAATTCGCTAAGGCGT- 678 Query 659 ACCGTGG-ACTTTACCAAAACTCCATTCCTAACGCGGGTGGCTTCTACGCGAGCAGTGGA 717 ||| ||| | ||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 679 ACCCTGGCA-TTTACCAAAACTCCATTACTAACGCCGGTGGCTTCTACGCGAGCAGTGGA 737 Query 718 TATGAAGATGAGTTGCTGTGGGCTGCAGCTTGGCTCCACCGTGCCACCAACGACCAGATT 777 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 738 TACGAAGATGAGTTGTTGTGGGCTGCAGCTTGGCTCCACCGTGCCACCAACGACCAGATT 797 Query 778 TATCTTGATTACCTAACAGAAGCA---GAAACAGGAGGTCCAAGGACTGTTTTTGCCTGG 834 ||||||||||| |||||| | ||| | |||||||||||||||||||||||||||||| Sbjct 798 TATCTTGATTATCTAACACAGGCATCTGGTACAGGAGGTCCAAGGACTGTTTTTGCCTGG 857 Query 835 GATGATAAGTTCGTGGGTGCACAAGTCTTGGTCGCCAAGCTAGCACTTGAAGGGAAAGTA 894 ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 858 GATGATAAGTTTGTGGGTGCACAAGTATTGGTCGCCAAGCTTGCACTTGAAGGGAAAGTA 917 Query 895 GAGAGCAGTG-AACAGATCGTAGAGTACAAGAGTATGGCGGAGCAGTTTATCTGCAACTG 953 |||| || || || |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 918 GAGAACAATGGAA-AGATCGCAGAGTACAAGAGTATGGCGGAGCAGTTTATCTGCAACTG 976 Query 954 TGCTCAAAAAGGTGACAACAACGTTAAGAAAACCCCTGGCGGTTTGCTCTACTTCTTGCC 1013 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 977 TGCTCAAAAAGGTTCCAACAACGTTAAGAAAACCCCTGGCGGTTTGCTCTACTTCTTGCC 1036 Query 1014 GTGGAACAACCTCCAATACACCACAGCCGCTACTTTCGTCCTCTCAGCATATTCTAAATA 1073 |||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||| Sbjct 1037 GTGGAACAACCTCCAATACACCGCAGCCGCTTCTTTCGTCCTCTCTGCATATTCTAAATA 1096 Query 1074 TCTTGAAGCCGCAAAAGCCTCCATCGACTGTCCCGATGGTGCTCTTCAAGCTTCTGATCT 1133 |||||||| |||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct 1097 TCTTGAAGACGCAAAAGCCTCCATCCAATGTCCCAATGGTGCTCTTCAAGCTTCTGATCT 1156 Query 1134 TCTCCAAGTCGCTCGTTCCCAGGTTGACTATATACTTGGGTCGAACCCCCAGAAAATGAG 1193 |||| | || ||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1157 TCTCGACCTCACTCGTTCCCAGGTAGACTATATACTTGGGTCGAACCCCCAGAACATGAG 1216 Query 1194 CTACATGGTTGGAGTTGGGACCAATTATCCCAAAAAACCACACCATAGAGCAGCCTCCAT 1253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1217 CTACATGGTTGGAGTTGGGACCAATTATCCCAAAAAACCACACCATAGAGCAGCCTCTAT 1276 Query 1254 AGTATCGATCAGACA-GGACAAAACACCAGTGACGTGTAGTGGAGGGTAT-GATAAATGG 1311 ||||||||||| || |||||||||||||||||||||||||| ||| | | ||| |||| Sbjct 1277 AGTATCGATCAC-CAAGGACAAAACACCAGTGACGTGTAGTGAAGGAT-TCGATGCATGG 1334 Query 1312 TATAACAATCCTGCACCAAACCCTAACGTTTTAGCGGGAGCAGTTGTCGGAGGACCCGAC 1371 | ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 1335 TTTAACAATCCTGCACCAAACCCTAACGTTTTAATGGGAGCAGTTGTCGGAGGACCCAAC 1394 Query 1372 GATAACGATGTTTATGGAGATGAGAGGAGTAATTTCCAGCAAGCTGAGCCTGCGACGGTC 1431 |||||||||||||||||||||||||||| | ||| |||||| |||||||||||| ||| | Sbjct 1395 GATAACGATGTTTATGGAGATGAGAGGACTGATTACCAGCATGCTGAGCCTGCGCCGGCC 1454 Query 1432 ACTACTGCTCCGCTTGTTGGTGTCTTGGC 1460 ||| ||||||| |||||||||||||||| Sbjct 1455 ACTGCTGCTCCATTTGTTGGTGTCTTGGC 1483 > Ahg483586 jgi|Araly1|483586|fgenesh2_kg.4__2646__AT2G44570.1 Length=1615 Score = 1133 bits (613), Expect = 0.0 Identities = 1143/1392 (82%), Gaps = 63/1392 (5%) Strand=Plus/Plus Query 42 AAGTATTTGCATTGTGTTA--A-TAGTAATGTCGATGGCTCGTGAAGC--TGTCT-C--- 92 ||| ||||||||||||||| | || || | ||||| |||||| ||| | ||| | Sbjct 39 AAGCATTTGCATTGTGTTACTATTATTATTATCGATTACTCGTGGAGCAATTTCTGCAAA 98 Query 93 TACAAATTATGCAGAAGCTCTCA-AAAACAGTCTTTTGTATTTCGAAGCTCAACGTTCTG 151 | ||||||||| ||||||||||| ||| |||||||||||||| ||||||||||| |||| Sbjct 99 TTCAAATTATGGAGAAGCTCTCACGAAA-AGTCTTTTGTATTTTGAAGCTCAACGCTCTG 157 Query 152 GAAAATTGCC-TCCGAACCAAAGAGTTACTTGGAGAGGAGATTCTGCTCTTAGAGACGGT 210 |||||||||| | |||||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 158 GAAAATTGCCAT-CGAACCAAAGAGTTACTTGGAGAGGAGATTCTGCACTCAGAGATGGT 216 Query 211 TCTGATGCTCATATTGATCTCACCGGAGGGTACTATGATGCGGGAGACAACATGAAGTTT 270 ||||||||||||||||||||||| |||||||| || ||||| ||||| || ||||||||| Sbjct 217 TCTGATGCTCATATTGATCTCACTGGAGGGTATTACGATGCCGGAGATAATATGAAGTTT 276 Query 271 GGATTTCCGTTGGCGTTCACGACAACAATGCTAGCTTGGAGCAATATAGAGATGGCATCA 330 |||||||| |||||||||||||||||||||||||||||||| | | ||||||||| |||| Sbjct 277 GGATTTCCTTTGGCGTTCACGACAACAATGCTAGCTTGGAGTAGTGTAGAGATGGAATCA 336 Query 331 CAGCTTAGGGCCCACCACGAGAAGGGAAACGCTCTCAG-GGCTCTCAAGTGGGCCACCGA 389 ||||||| ||||||||| ||| | | |||| | ||| | |||||||| ||||||||| || Sbjct 337 CAGCTTAAGGCCCACCATGAGCACGAAAACACCCTC-GCGGCTCTCAGGTGGGCCACTGA 395 Query 390 TTATCTCATTAAAGCCCATCCTCAGCCTAATGTCCTGTACGGACAAGTGGGTGAAGGAAA 449 |||||||||||||||||||||| |||| |||||||||||||||||||||||||| || || Sbjct 396 TTATCTCATTAAAGCCCATCCTGAGCCCAATGTCCTGTACGGACAAGTGGGTGATGGCAA 455 Query 450 CTCGGACCACAAATGCTGGATGAGACCTGAGGATATGACCACTCCGCGTACTTCATACCG 509 || ||| || |||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct 456 CTTGGATCATGCCTGCTGGATGAGACCCGAGGATATGACTACTCCGCGCCCTTCATACCG 515 Query 510 CATCGATGCTCAACATCCAGGTTCTGACCTAGCAGGTGAGACAGCTGCAGCAATGGCGGC 569 ||| |||||||| ||||| ||| |||| || || ||||||||||| ||||| ||||| || Sbjct 516 CATTGATGCTCAGCATCCTGGTGCTGATCTCGCGGGTGAGACAGCAGCAGCGATGGCTGC 575 Query 570 AGCGTCTATCGCCTTTGCACCATCTGATAAAGCCTATGCCAATATACTCATTGGTCATGC 629 ||| ||| | |||||||| ||||||||| |||||| ||||| | ||| ||||||||||| Sbjct 576 AGCTTCTTTGGCCTTTGCGCCATCTGATGCAGCCTACGCCAAAACACTTATTGGTCATGC 635 Query 630 AAAAGATTTATTTGCATTCGCTAAGGC-TCACCGTGGACTTTACCAAAACTCCATTCCTA 688 ||||||| |||||| ||||||||||| | ||| ||| | || || |||||||||||| Sbjct 636 AAAAGATCTATTTGAATTCGCTAAGGAAT-ACCCTGGGGTCTATCATTACTCCATTCCTA 694 Query 689 ACGCGGGTGGCTTCTACGCGAGCAGTGGATATGAAGATGAGTTGCTGTGGGCTGCAGCTT 748 ||||||||||||| ||| | || ||||| || ||||||||||| ||||||| || |||| Sbjct 695 ACGCGGGTGGCTTTTACCCTAGTAGTGGTTACGAAGATGAGTTATTGTGGGCCGCTGCTT 754 Query 749 GGCTCCACCGTGCCACCA-ACGACCAGATTTATCTTGATTACCTAACAGAAGCAGA-AAC 806 |||| ||||||||||| | ||||||| ||||||||||| ||||||||||| || Sbjct 755 GGCTTCACCGTGCCACTGGA-GACCAGACATATCTTGATTATCTAACAGAAGCTTCTAAT 813 Query 807 A-GG-AGGTCCAAGGA-CTGTTTTTGCCTGGGATGATAAGTTCGTGGGTGCACAAGTCTT 863 | || |||| | ||| | ||||| || ||||| ||||||||| |||| ||||||||||| Sbjct 814 AAGGGAGGTGCGAGGTTC-GTTTTCGCGTGGGACGATAAGTTCTTGGGAGCACAAGTCTT 872 Query 864 GGTCGCCAAGCTAGCACTTGAAGGGAAAGTAGA-GAGC-A-GTGAACAGATCG-TAGAGT 919 ||| |||||||| | ||||||| ||||| || || | | | ||| ||| | |||| | Sbjct 873 GGTAGCCAAGCTTGTTTTTGAAGGAAAAGT-GAAGAACGAAGGGAA--GAT-GATAGAAT 928 Query 920 ACAAGAGTATGGCGGAGCAGTTTATCTGCAACTGTGCTCAAAAAGGTGACAACAACGTTA 979 ||||||||||||| ||||| || |||||||||||||||||||| ||| ||||||||||| Sbjct 929 ACAAGAGTATGGCAGAGCAATTCATCTGCAACTGTGCTCAAAAGGGTTTCAACAACGTTA 988 Query 980 AGAAA-ACCCCTGGCGGTTTGCTCTACTTCTTG-CCGTGGAACAACCTCCAATACACCA- 1036 | ||| || || || |||||||||| || ||| || ||| |||||||||||||||| | Sbjct 989 A-AAAGACTCCAGGAGGTTTGCTCTGGTTTTTGTCC-TGGGACAACCTCCAATACAC-AG 1045 Query 1037 C-AGCCGCTACTTTCGTCCTCTCAGC-A-T-ATTCTAAATATCTTGAAGCCGCA-AAAGC 1091 | | ||||| |||||| ||| | ||| | | || ||||||| || ||||| ||| ||| | Sbjct 1046 CCA-CCGCTTCTTTCG-CCT-T-AGCCACTTATGCTAAATACCTCGAAGCTGCACAAA-C 1100 Query 1092 CTCCAT-CGACTGTCCCGATGGTGCT--C-TTCAAGCTTCTGATCTTCTCCAAGTCGCTC 1147 || || | | || ||| |||||| | | ||||||||| ||||||||| || | |||| Sbjct 1101 ATCGATTCAA-TGCCCCAATGGTGGTGTCCTTCAAGCTTATGATCTTCTTAAACTAGCTC 1159 Query 1148 GTTCCCAGGTTGACTATATACTTGGGTCGAACCCCCAGAAAATGAGCTACATGGTTGGAG 1207 | ||||||| ||||| ||||||||||| |||||| |||| |||||||||||||||||| Sbjct 1160 GGGCCCAGGTAGACTACATACTTGGGTCAAACCCCAAGAACATGAGCTACATGGTTGGA- 1218 Query 1208 TT-GGGACCAATTATCCCAAAAAACCACACCATAGAGCAGCCTCCATAGTATCGATCA-G 1265 | |||||||||||||| |||| |||||||||||||| |||||| ||||| || |||| | Sbjct 1219 TACGGGACCAATTATCCTAAAAGACCACACCATAGAGGAGCCTCTATAGTGTCAATCAAG 1278 Query 1266 ACAGGA-CAAAACACCAGTGACGTGTAGTGGAGGGTATGATAAAT-GGTATAACAATCCT 1323 | | || | || ||| ||||| || | |||||||| ||| | | |||| ||||| ||| Sbjct 1279 A-ATGATCCTAA-ACCGGTGACATGCAATGGAGGGTTTGA-AGCTTGGTACAACAACCCT 1335 Query 1324 GCACCAAACCCTAACGTTTTAGCGGGAGCAGTTGTCGGAGGACCCGACGA-TAACGATGT 1382 ||| || ||||| ||||| | |||||| |||| || ||||| ||||| || ||||| Sbjct 1336 AAACCGAATCCTAATGTTTTGGTTGGAGCAATTGTAGGTGGACCGGACGAGTA-CGATGC 1394 Query 1383 TTATGGAGATGA 1394 ||| |||||||| Sbjct 1395 TTACGGAGATGA 1406 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 55116584515 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5