BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT2G44560.1 Length=1663 Score E Sequences producing significant alignments: (Bits) Value Ahg935393 jgi|Araly1|935393|scaffold_403381.1 2501 0.0 Ahg346267 jgi|Araly1|346267|fgenesh1_pg.C_scaffold_4002609 2135 0.0 Ahg483586 jgi|Araly1|483586|fgenesh2_kg.4__2646__AT2G44570.1 1208 0.0 > Ahg935393 jgi|Araly1|935393|scaffold_403381.1 Length=1516 Score = 2501 bits (1354), Expect = 0.0 Identities = 1465/1519 (96%), Gaps = 6/1519 (0%) Strand=Plus/Plus Query 34 AAAGATTATTTaaaaaaaCGATGTCTCAACTGAAAATTGGATCTTCACAATGCTTATGGA 93 |||||||| || ||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 1 AAAGATTAATTGAAAAAACGATGTCTCAATTGAAAAATGGATCTTCACAATGCTTATGGA 60 Query 94 CAAGTATTTGCATTGTGTTATTTGTATTGTCGATGGCTCGTGGAGCTGTCTCTAGAAATT 153 |||||||||||||||||||| | ||| |||||| |||||||||||||||||||| ||||| Sbjct 61 CAAGTATTTGCATTGTGTTAATAGTAATGTCGACGGCTCGTGGAGCTGTCTCTACAAATT 120 Query 154 ATGGAGACGCTCTCACAAAGAGTCTTTTGTATTTCGAAGCTCAACGTTCTGGAAAATTGC 213 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 ATGGAGAAGCTCTCACAAAGAGTCTTTTGTATTTCGAAGCTCAACGTTCTGGAAAATTGC 180 Query 214 CTTCGAACCAAAGAGTTACTTGGAGAGGAGATTCTGCGCTTAGAGACGGTTCTGATGCTC 273 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 181 CTTCGAACCAAAGAGTTACTTGGAGAGGAGATTCTGCTCTTAGAGATGGTTCTGATGCTC 240 Query 274 ATGTTGATCTAACCGGAGGGTACTATGATGCCGGAGACAACATGAAGTTTGGATTTCCGT 333 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 241 ATGTTGATCTCACCGGAGGGTACTATGATGCTGGAGACAACATGAAGTTTGGATTTCCGT 300 Query 334 TGGCCTTCTTTACAACAATGCTAGCTTGGAGCAATATAGAGATGGCAACACAGCTTAAGG 393 |||| ||| | |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 301 TGGCGTTCATGACAACAATGCTAGCTTGGAGCAATATAGAGATGGCATCACAGCTTAAGG 360 Query 394 CCCATCAAGAGCAAGAAAACGCCCTCGCGGCTCTCAAGTGGGCCACCGATTTTCTCATTA 453 ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 361 CCCATCAGGAGCAGGAAAACGCCCTTGCGGCTCTCAAGTGGGCCACCGATTTTCTCATTA 420 Query 454 AAGCCCATCCTGAGCCCAATGTCTTGTACGGACAGGTGGGCGATGGAAACTCGGACCAC- 512 |||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct 421 AAGCCCATCCTGAGCCCAATGTCTTGTACGGACAAGTGGGTGACGGAAACTCGGACCACG 480 Query 513 GAGTGCTGGATGAGGCCTGAGGATATGACAACTCCACGTCCTTCATTTCGCATTGATGCT 572 || ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 481 GA-TGCTGGATGAGACCTGAGGATATGACCACTCCACGTCCTTCATTTCGCATTGATGCT 539 Query 573 CAACATCCAGGTTCTGACCTAGCAGGTGAGACAGCAGCAGCAATGGCTGCTGCGTCTATC 632 |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| Sbjct 540 CAACATCCAGGTTCAGACCTAGCAGGTGAGACAGCTGCAGCAATGGCTGCAGCGTCTATT 599 Query 633 GCCTTTGCACCATCTGATGAAGCCTATGCCCAAATACTCATTGGTCATGCGAAAGAATTA 692 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| Sbjct 600 GCCTTTGCACCATCTGATGAAGCCTATGCCAAAATACTTATTGGTCATGCGAAAGATTTA 659 Query 693 TTTGAATTCGCTAAGGCGTACCCTGGCATTTACCAAAACTCCATTACTAACGCGGGTGGC 752 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 660 TTTGAATTCGCTAAGGCGTACCCTGGCATTTACCAAAACTCCATTACTAACGCCGGTGGC 719 Query 753 TTCTACGCGAGCAGTGGATACGAAGATGAGTTGTTATGGGCTGCAGCTTGGCTCCACCGT 812 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 720 TTCTACGCGAGCAGTGGATACGAAGATGAGTTGTTGTGGGCTGCAGCTTGGCTCCACCGT 779 Query 813 GCCACCAACGACCAGATTTATCTTGATTATCTAACACAAGCATCTGGTACAGGAGGTCCG 872 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 780 GCCACCAACGACCAGATTTATCTTGATTATCTAACACAGGCATCTGGTACAGGAGGTCCA 839 Query 873 AGGACTGCTTTTT-CCTGGGATGATAAGTTCGTGGGTGCACAAGTCTTGGTCGCCAAGCT 931 ||||||| ||||| |||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 840 AGGACTG-TTTTTGCCTGGGATGATAAGTTTGTGGGTGCACAAGTATTGGTCGCCAAGCT 898 Query 932 TGCACTTGAAGGGAAAGTAGAGAGCAATGGAAAGATCGCAGAGTACAAGAGTATGGCAGA 991 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 899 TGCACTTGAAGGGAAAGTAGAGAACAATGGAAAGATCGCAGAGTACAAGAGTATGGCGGA 958 Query 992 GCAGTTTATCTGCAACTGTGCTCAAAAAGGTTCCAACAACGTTAAGAAAACCCCTGGCGG 1051 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 959 GCAGTTTATCTGCAACTGTGCTCAAAAAGGTTCCAACAACGTTAAGAAAACCCCTGGCGG 1018 Query 1052 TTTGCTCTACTTCTTGCCGTGGAACAACCTCCAATACACCACAGCCGCTACTTTCGTCCT 1111 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 1019 TTTGCTCTACTTCTTGCCGTGGAACAACCTCCAATACACCGCAGCCGCTTCTTTCGTCCT 1078 Query 1112 CTCAGCATATTCTAAATATCTT-ACAGACGCAAAAGCCTCCATCCAATGTCCCAATGGTG 1170 ||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 1079 CTCTGCATATTCTAAATATCTTGA-AGACGCAAAAGCCTCCATCCAATGTCCCAATGGTG 1137 Query 1171 CTCTTCAAGCTTCTGATCTTCTCGACCTCGCTCGTTCCCAGGTAGACTATATACTTGGGT 1230 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1138 CTCTTCAAGCTTCTGATCTTCTCGACCTCACTCGTTCCCAGGTAGACTATATACTTGGGT 1197 Query 1231 CGAACCCCCAGAACATGAGCTACATGGTTGGAGTTGGGACCAATTATCCCAAAAAACCAC 1290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1198 CGAACCCCCAGAACATGAGCTACATGGTTGGAGTTGGGACCAATTATCCCAAAAAACCAC 1257 Query 1291 ACCATAGAGCAGCCTCTATTGTATCGATCACCAAGGACAAAACACCAGTGACGTGTAGTG 1350 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1258 ACCATAGAGCAGCCTCTATAGTATCGATCACCAAGGACAAAACACCAGTGACGTGTAGTG 1317 Query 1351 AAGGATTCGATGCATGGTTTAACAATCCTGCACCAAATCCTAACGTTTTAATGGGAGCAG 1410 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1318 AAGGATTCGATGCATGGTTTAACAATCCTGCACCAAACCCTAACGTTTTAATGGGAGCAG 1377 Query 1411 TTGTCGGAGGACCCAACGATAACGATGTTTATGGAGATGAGAGGACTGATTACCAGCATG 1470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1378 TTGTCGGAGGACCCAACGATAACGATGTTTATGGAGATGAGAGGACTGATTACCAGCATG 1437 Query 1471 CTGAGCCTGCTCCGGCCACTGCTGCTCCATTTGTTGGTGTCTTGGCGGCCGTTGCTTAAT 1530 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 CTGAGCCTGCGCCGGCCACTGCTGCTCCATTTGTTGGTGTCTTGGCGGCCGTTGCTTAAT 1497 Query 1531 CTTTCTCTTTGTTTTGCAA 1549 ||||||||||||||||||| Sbjct 1498 CTTTCTCTTTGTTTTGCAA 1516 > Ahg346267 jgi|Araly1|346267|fgenesh1_pg.C_scaffold_4002609 Length=1473 Score = 2135 bits (1156), Expect = 0.0 Identities = 1380/1486 (93%), Gaps = 23/1486 (2%) Strand=Plus/Plus Query 54 ATGTCTCAACTGAAAATTGGATCTTCACAATGCTTATGGACAAGTATTTGCATTGTGTTA 113 ||||||||| |||||| |||||||||||||| ||||||||||||||||||||| |||||| Sbjct 1 ATGTCTCAATTGAAAAATGGATCTTCACAATACTTATGGACAAGTATTTGCATGGTGTTA 60 Query 114 TTTGTATTGTCGATGGCTCGTGGAGCTGTCTCTAGAAATTATGGAGACGCTCTCACAAAG 173 | ||| ||||||||||||||| ||||||||||| |||||||||||| ||||||| ||| Sbjct 61 CTAGTAATGTCGATGGCTCGTGAAGCTGTCTCTACAAATTATGGAGAAGCTCTCAGAAAC 120 Query 174 AGTCTTTTGTATTTCGAAGCTCAACGTTCTGGAAAATTGCCTTCGAACCAAAGAGTTACT 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AGTCTTTTGTATTTCGAAGCTCAACGTTCTGGAAAATTGCCTTCGAACCAAAGAGTTACT 180 Query 234 TGGAGAGGAGATTCTGCGCTTAGAGACGGTTCTGATGCTCATGTTGATCTAACCGGAGGG 293 ||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||| ||| Sbjct 181 TGGAGAGGAGATTCTGCTCTTAGAGACGGTTCTGATGCTCATATCGATCTCACCGGTGGG 240 Query 294 TACTATGATGCCGGAGACAACATGAAGTTTGGATTTCCGTTGGCCTTCTTTACAACAATG 353 |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 241 TACTATGATGCCGGAGACAACATGAAGTTTGGATTTCCGTTGGCGTTCACGACAACAATG 300 Query 354 CTAGCTTGGAGCAATATAGAGATGGCAACACAGCTTAAGGCCCATCAAGAGCAA-GAAAA 412 ||||||||||||||||||||||||||| ||||||||| |||||| || ||| || | ||| Sbjct 301 CTAGCTTGGAGCAATATAGAGATGGCATCACAGCTTAGGGCCCACCACGAG-AAGGGAAA 359 Query 413 CGCCCTC-GCGGCTCTCAAGTGGGCCACCGATTTTCTCATTAAAGCCCATCCTGAGCCCA 471 | | ||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 CTCTCTCAG-GGCTCTCAAGTGGGCCACCGATTTTCTCATTAAAGCCCATCCTGAGCCCA 418 Query 472 ATG-TCTTGTACGGACAGGTGGGCGATGGAAACTCGGACCACGAGTGCTGGATGAGGCCT 530 ||| || |||||||||| ||||| || ||||||||||||||| | ||||||||||| ||| Sbjct 419 ATGTTC-TGTACGGACAAGTGGGTGAGGGAAACTCGGACCACAAATGCTGGATGAGACCT 477 Query 531 GAGGATATGACAACTCCACGTCCTTCATTTCGCATTGATGCTCAACATCCAGGTTCTGAC 590 ||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||||| Sbjct 478 GAGGATATGACCACTCCGCGTACTTCATTTCGCATCGATGCTCAACATCCAGGTTCTGAC 537 Query 591 CTAGCAGGTGAGACAGCAGCAGCAATGGCTGCTGCGTCTATCGCCTTTGCACCATCTGAT 650 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 538 CTAGCAGGTGAGACAGCTGCAGCAATGGCTGCAGCGTCTATCGCCTTTGCACCATCTGAT 597 Query 651 GAAGCCTATGCCCAAATACTCATTGGTCATGCGAAAGAATTATTTGAATTCGCTAAGGCG 710 ||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| Sbjct 598 AAAGCCTATGCCCAAATACTCATTGGTCATGCAAAAGATTTATTTGCATTCGCTAAGGC- 656 Query 711 T-ACCCTGGCATTTACCAAAACTCCATTACTAACGCGGGTGGCTTCTACGCGAGCAGTGG 769 | ||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 657 TCACCGTGGCGTTTACCAAAACTCCATTCCTAACGCGGGTGGCTTCTACGCGAGCAGTGG 716 Query 770 ATACGAAGATGAGTTGTTATGGGCTGCAGCTTGGCTCCACCGTGCCACCAACGACCAGAT 829 |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 717 ATACGAAGATGAGTTGCTGTGGGCTGCAGCTTGGCTCCACCGTGCCACCAACGACCAGAT 776 Query 830 TTATCTTGATTATCTAACACAAGCATCTGGTACAGGAGGTCCGAGGACTGCTTTTT-CCT 888 |||||||||||| |||||||||||| | ||||||||||| ||||||| ||||| ||| Sbjct 777 TTATCTTGATTACCTAACACAAGCA---GAAACAGGAGGTCCAAGGACTG-TTTTTGCCT 832 Query 889 GGGATGATAAGTTCGTGGGTGCACAAGTCTTGGTCGCCAAGCTTGCACTTGAAGGGAAAG 948 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 833 GGGATGATAAGTTCGTGGGTGCACAAGTCTTGGTCGCCAAGCTTGCACTTGAAGGGAAAG 892 Query 949 TAGAGAGCAATGGAA-AGATCGCAGAGTACAAGAGTATGGCAGAGCAGTTTATCTGCAAC 1007 ||||||||| | ||| |||||| |||||||||||||||||| |||||||||||||||||| Sbjct 893 TAGAGAGCAGT-GAAGAGATCGTAGAGTACAAGAGTATGGCGGAGCAGTTTATCTGCAAC 951 Query 1008 TGTGCTCAAAAAGGTTCCAACAACGTTAAGAAAACCCCTGGCGGTTTGCTCTACTTCTTG 1067 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 952 TGTGCTCAAAAAGGTGACAACAACGTTAAGAAAACCCCTGGCGGTTTGCTCTACTTCTTG 1011 Query 1068 CCGTGGAACAACCTCCAATACACCACAGCCGCTACTTTCGTCCTCTCAGCATATTCTAAA 1127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1012 CCGTGGAACAACCTCCAATACACCACAGCCGCTACTTTCGTCCTCTCAGCATATTCTAAA 1071 Query 1128 TATCTT-ACAGACGCAAAAGCCTCCATCCAA-TGTCCCAATGGTGCTCTTCAAGCTTCTG 1185 |||||| | || |||||||||||||||| || || ||||||||||||||||||||||||| Sbjct 1072 TATCTTGA-AGCCGCAAAAGCCTCCATC-AACTGCCCCAATGGTGCTCTTCAAGCTTCTG 1129 Query 1186 ATCTTCTCGACCTCGCTCGTTCCCAGGTAGACTATATACTTGGGTCGAACCCCCAGAACA 1245 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1130 ATCTTCTCCACCTCGCTCGTTCCCAGGTAGACTATATACTTGGGTCGAACCCCAAGAACA 1189 Query 1246 TGAGCTACATGGTTGGAGTTGGGACCAATTATCCCAAAAAACCACACCATAGAGCAGCCT 1305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1190 TGAGCTACATGGTTGGAGTTGGGACCAATTATCCCAAAAAACCACACCATAGAGCAGCCT 1249 Query 1306 CTATTGTATCGAT-CACCAAGGACAAAACACCAGTGACGTGTAGTGAAGGATTCGATGCA 1364 | || ||||| || ||| |||||||||||||||||||| ||||||| ||| ||| ||||| Sbjct 1250 CCATAGTATCAATACAC-AAGGACAAAACACCAGTGACTTGTAGTGGAGGGTTCAATGCA 1308 Query 1365 TGGTTTAACAATCCTGCACCAAATCCTAACGTTTTAATGGGAGCAGTTGTCGGAGGACCC 1424 |||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct 1309 TGGTATAACAATCCTGCACCAAACCCTAACGTTTTAGCGGGAGCAGTTGTCGGAGGACCC 1368 Query 1425 AACGATAACGATGTTTATGGAGATGAGAGGACTGATTACCAGCATGCTGAGCCTGCTCCG 1484 |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| || Sbjct 1369 GACGATAACGATGTTTATGGAGATGAGAGGACTAATTTCCAGCAAGCTGAGCCTGCGACG 1428 Query 1485 GCCACTGCTGCTCCATTTGTTGGTGTCTTGGCGGC-CGTTGCTTAA 1529 | |||||||||||| |||||||||||||||| | |||||||||| Sbjct 1429 GTCACTGCTGCTCCGCTTGTTGGTGTCTTGGCC-CTCGTTGCTTAA 1473 > Ahg483586 jgi|Araly1|483586|fgenesh2_kg.4__2646__AT2G44570.1 Length=1615 Score = 1208 bits (654), Expect = 0.0 Identities = 1210/1471 (82%), Gaps = 68/1471 (5%) Strand=Plus/Plus Query 95 AAGTATTTGCATTGTGTTA-T-TT-GTATTGTCGATGGCTCGTGGAGC--TGTCT-C--- 145 ||| ||||||||||||||| | || |||| ||||| |||||||||| | ||| | Sbjct 39 AAGCATTTGCATTGTGTTACTATTATTATTATCGATTACTCGTGGAGCAATTTCTGCAAA 98 Query 146 TAGAAATTATGGAGACGCTCTCAC-AAAGAGTCTTTTGTATTTCGAAGCTCAACGTTCTG 204 | |||||||||||| |||||||| ||| |||||||||||||| ||||||||||| |||| Sbjct 99 TTCAAATTATGGAGAAGCTCTCACGAAA-AGTCTTTTGTATTTTGAAGCTCAACGCTCTG 157 Query 205 GAAAATTGCCTTCGAACCAAAGAGTTACTTGGAGAGGAGATTCTGCGCTTAGAGACGGTT 264 |||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |||| Sbjct 158 GAAAATTGCCATCGAACCAAAGAGTTACTTGGAGAGGAGATTCTGCACTCAGAGATGGTT 217 Query 265 CTGATGCTCATGTTGATCTAACCGGAGGGTACTATGATGCCGGAGACAACATGAAGTTTG 324 ||||||||||| ||||||| || |||||||| || ||||||||||| || |||||||||| Sbjct 218 CTGATGCTCATATTGATCTCACTGGAGGGTATTACGATGCCGGAGATAATATGAAGTTTG 277 Query 325 GATTTCCGTTGGCCTTCTTTACAACAATGCTAGCTTGGAGCAATATAGAGATGGCAA-CA 383 ||||||| ||||| ||| |||||||||||||||||||| | | ||||||||| || || Sbjct 278 GATTTCCTTTGGCGTTCACGACAACAATGCTAGCTTGGAGTAGTGTAGAGATGG-AATCA 336 Query 384 CAGCTTAAGGCCCATCAAGAGCAAGAAAACGCCCTCGCGGCTCTCAAGTGGGCCACCGAT 443 |||||||||||||| || ||||| |||||| ||||||||||||||| ||||||||| ||| Sbjct 337 CAGCTTAAGGCCCACCATGAGCACGAAAACACCCTCGCGGCTCTCAGGTGGGCCACTGAT 396 Query 444 TTTCTCATTAAAGCCCATCCTGAGCCCAATGTCTTGTACGGACAGGTGGGCGATGGAAAC 503 | ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||| ||| Sbjct 397 TATCTCATTAAAGCCCATCCTGAGCCCAATGTCCTGTACGGACAAGTGGGTGATGGCAAC 456 Query 504 TCGGACCACGAGTGCTGGATGAGGCCTGAGGATATGACAACTCCACGTCCTTCATTTCGC 563 | ||| || | ||||||||||| || ||||||||||| ||||| || ||||||| ||| Sbjct 457 TTGGATCATGCCTGCTGGATGAGACCCGAGGATATGACTACTCCGCGCCCTTCATACCGC 516 Query 564 ATTGATGCTCAACATCCAGGTTCTGACCTAGCAGGTGAGACAGCAGCAGCAATGGCTGCT 623 ||||||||||| ||||| ||| |||| || || ||||||||||||||||| |||||||| Sbjct 517 ATTGATGCTCAGCATCCTGGTGCTGATCTCGCGGGTGAGACAGCAGCAGCGATGGCTGCA 576 Query 624 GCGTCTATCGCCTTTGCACCATCTGATGAAGCCTATGCCCAAATACTCATTGGTCATGCG 683 || ||| | |||||||| |||||||||| |||||| ||| ||| ||| ||||||||||| Sbjct 577 GCTTCTTTGGCCTTTGCGCCATCTGATGCAGCCTACGCCAAAACACTTATTGGTCATGCA 636 Query 684 AAAGAAT-TATTTGAATTCGCTAAGGCGTACCCTGGCATTTACCAAAACTCCATTACTAA 742 ||||| | |||||||||||||||||| |||||||| | || || |||||||| |||| Sbjct 637 AAAGA-TCTATTTGAATTCGCTAAGGAATACCCTGGGGTCTATCATTACTCCATTCCTAA 695 Query 743 CGCGGGTGGCTTCTACGCGAGCAGTGGATACGAAGATGAGTTGTTATGGGCTGCAGCTTG 802 |||||||||||| ||| | || ||||| |||||||||||||| || ||||| || ||||| Sbjct 696 CGCGGGTGGCTTTTACCCTAGTAGTGGTTACGAAGATGAGTTATTGTGGGCCGCTGCTTG 755 Query 803 GCTCCACCGTGCCACCA-ACGACCAGATTTATCTTGATTATCTAACACAAGCATCTGGTA 861 ||| ||||||||||| | ||||||| |||||||||||||||||| |||| ||| || Sbjct 756 GCTTCACCGTGCCACTGGA-GACCAGACATATCTTGATTATCTAACAGAAGCTTCTAATA 814 Query 862 CAGG-AGGTCCGAGGACTGCTTTTTC-C-TGGGATGATAAGTTCGTGGGTGCACAAGTCT 918 ||| |||| ||||| | | ||||| | ||||| ||||||||| |||| |||||||||| Sbjct 815 -AGGGAGGTGCGAGGT-T-CGTTTTCGCGTGGGACGATAAGTTCTTGGGAGCACAAGTCT 871 Query 919 TGGTCGCCAAGCTTGCACTTGAAGGGAAAGTAGA-GAGC-AATGGAAAGATCGC-AGAGT 975 |||| |||||||||| ||||||| ||||| || || | || |||| ||| | ||| | Sbjct 872 TGGTAGCCAAGCTTGTTTTTGAAGGAAAAGT-GAAGAACGAAGGGAA-GAT-GATAGAAT 928 Query 976 ACAAGAGTATGGCAGAGCAGTTTATCTGCAACTGTGCTCAAAAAGGTTCCAACAACGTTA 1035 ||||||||||||||||||| || |||||||||||||||||||| |||| ||||||||||| Sbjct 929 ACAAGAGTATGGCAGAGCAATTCATCTGCAACTGTGCTCAAAAGGGTTTCAACAACGTTA 988 Query 1036 AGAAA-ACCCCTGGCGGTTTGCTCTACTTCTTG-CCGTGGAACAACCTCCAATACACCA- 1092 | ||| || || || |||||||||| || ||| || ||| |||||||||||||||| | Sbjct 989 A-AAAGACTCCAGGAGGTTTGCTCTGGTTTTTGTCC-TGGGACAACCTCCAATACAC-AG 1045 Query 1093 C-AGCCGCTACTTTCGTCCTCTCAGC-A-T-ATTCTAAATATCTT-ACAGAC-GCA-AAA 1145 | | ||||| |||||| ||| | ||| | | || ||||||| || | || | ||| ||| Sbjct 1046 CCA-CCGCTTCTTTCG-CCT-T-AGCCACTTATGCTAAATACCTCGA-AG-CTGCACAAA 1099 Query 1146 GCCTCCATCCAATGTCCCAATGGTGCT--C-TTCAAGCTTCTGATCTTCTCGACCTCGCT 1202 | || || ||||| |||||||||| | | ||||||||| ||||||||| | || ||| Sbjct 1100 -CATCGATTCAATGCCCCAATGGTGGTGTCCTTCAAGCTTATGATCTTCTTAAACTAGCT 1158 Query 1203 CGTTCCCAGGTAGACTATATACTTGGGTCGAACCCCCAGAACATGAGCTACATGGTTGGA 1262 || ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||| Sbjct 1159 CGGGCCCAGGTAGACTACATACTTGGGTCAAACCCCAAGAACATGAGCTACATGGTTGGA 1218 Query 1263 GTT-GGGACCAATTATCCCAAAAAACCACACCATAGAGCAGCCTCTATTGTATCGATCAC 1321 | |||||||||||||| |||| |||||||||||||| ||||||||| || || |||| Sbjct 1219 -TACGGGACCAATTATCCTAAAAGACCACACCATAGAGGAGCCTCTATAGTGTCAATCAA 1277 Query 1322 CAAGGA-CAAAACACCAGTGACGTGTAGTGAAGGATTCGATGCATGGTTTAACAATCCTG 1380 || || | || ||| ||||| || | || ||| || || || |||| ||||| ||| Sbjct 1278 GAATGATCCTAA-ACCGGTGACATGCAATGGAGGGTTTGAAGCTTGGTACAACAACCCTA 1336 Query 1381 CACCAAATCCTAACGTTTTAATGGGAGCAGTTGTCGGAGGACCCAACGA-TAACGATGTT 1439 ||| |||||||| ||||| | |||||| |||| || ||||| |||| || ||||| | Sbjct 1337 AACCGAATCCTAATGTTTTGGTTGGAGCAATTGTAGGTGGACCGGACGAGTA-CGATGCT 1395 Query 1440 TATGGAGATGAGA-GGACTGATTACCAGCATG-CTGAGCCTGCT-CCGGCCACTGCTGCT 1496 || |||||||| | || |||||| |||| | | ||||| | | ||| | || | |||| Sbjct 1396 TACGGAGATGA-ACGGTCTGATTTTGAGCACGAC-GAGCCCGATACCGTC-ACGGTTGCT 1452 Query 1497 CCATTTG-TTGGTGT-CTTGGCGGCCGTTGC 1525 || |||| ||||||| || ||| ||| |||| Sbjct 1453 CC-TTTGGTTGGTGTTCT-GGCTGCCATTGC 1481 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62353731065 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5