BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT2G44590.3

Length=2142
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg483589 jgi|Araly1|483589|fgenesh2_kg.4__2649__AT2G44590.3        3129    0.0  
  Ahg486488 jgi|Araly1|486488|fgenesh2_kg.5__2480__AT3G60190.1        1277    0.0  


> Ahg483589 jgi|Araly1|483589|fgenesh2_kg.4__2649__AT2G44590.3
Length=2065

 Score = 3129 bits (1694),  Expect = 0.0
 Identities = 1958/2083 (94%), Gaps = 28/2083 (1%)
 Strand=Plus/Plus

Query  1     ATATTGAAAACGCCCGCTCTCTGTTTTTTCTCGTTTCTCCTCCCTTCGTTCTCGGGTCCA  60
             |||||||||||||||||||||| |||||||||||||||  | ||||||||||| ||||||
Sbjct  1     ATATTGAAAACGCCCGCTCTCTCTTTTTTCTCGTTTCT--T-CCTTCGTTCTCAGGTCCA  57

Query  61    TCTGCGTTCGTATCAAGTCCTT-GCACTCTTCTTCTTCGTATCTGGATTGTTTCGAAGTT  119
             ||||||||||| ||| || ||| ||| ||||||||||||| |||||||| ||| ||||  
Sbjct  58    TCTGCGTTCGTCTCACGT-CTTGGCATTCTTCTTCTTCGTCTCTGGATT-TTT-GAAG--  112

Query  120   CTCTAACGAACGACAATGGAGAGTTTGATCGTGTTGATTAATACGATACAAAGAGCATGC  179
              | |    |||||||||||||||||||||| ||||| ||||||||||||| |||||||||
Sbjct  113   -T-T----AACGACAATGGAGAGTTTGATCTTGTTGGTTAATACGATACAGAGAGCATGC  166

Query  180   ACCGTAGTCGGCGATCATGGCGGCGATAGCAACGCTCTATCTTCTCTATGGGAAGCTCTT  239
             |||  |||||||||||||||||||| ||  ||||||||||||||||| ||||||||||||
Sbjct  167   ACCACAGTCGGCGATCATGGCGGCGGTAATAACGCTCTATCTTCTCTCTGGGAAGCTCTT  226

Query  240   CCTTCCGTCGCCGTCGTTGGTGGCCAGAGTTCTGGTAAATCTTCGGTTCTAGAGAGTATC  299
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  227   CCTTCCGTCGCCGTCGTTGGTGGCCAGAGTTCTGGTAAATCTTCGGTTCTAGAGAGCATC  286

Query  300   GTCGGGAGAGATTTTCTTCCCAGAGGATCCGGTATTGTTACGAGACGGCCTTTGGTTTTA  359
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  287   GTCGGGAGAGATTTTCTTCCCAGAGGATCCGGTATTGTTACGAGACGGCCTTTGGTTTTA  346

Query  360   CAACTTCATAAGACTGAAAATGGAACAGAGGATAACGCAGAGTTTCTCCACCTTACCAAT  419
             ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| 
Sbjct  347   CAACTTCATAAGACTGAAAATGGAACAGAGGATTACGCTGAGTTTCTCCACCTTACCAAG  406

Query  420   AAAAAATTCACCAATTTCTCTTTGGTTAGAAAGGAGATTGAGGATGAGACTGATAGAATC  479
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  407   AAGAAATTCACCAATTTCTCTTTGGTTAGAAAGGAGATTGAGGATGAGACTGATAGAATC  466

Query  480   ACTGGGAAGAACAAACAGATTTCTTCAATTCCTATTCACCTCAGTATTTTCTCTCCCAAT  539
             |||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||
Sbjct  467   ACTGGGAAGAACAAACAGATTTCTCCAATTCCTATTCACCTTAGCATTTTCTCTCCCAAT  526

Query  540   GTTGTGAATCTTACTCTCATTGATTTACCTGGTTTGACTAAAGTTGCTGTTGAAGGACAG  599
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct  527   GTTGTGAATCTTACTCTCATTGATTTACCTGGTTTGACTAAAGTTGCCGTTGAAGGACAG  586

Query  600   CCAGAAACTATTGTTGAGGATATCGAATCCATGGTTCGCTCATACGTCGAAAAGCCTAAC  659
             ||||| ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct  587   CCAGATACTATAGTTGAGGATATCGAAACCATGGTTCGCTCATACGTTGAAAAGCCTAAC  646

Query  660   TGTCTTATACTGGCAATATCTCCTGCTAATCAAGACATAGCTACATCCGACGCGATGAAG  719
             ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct  647   TGTCTTATACTAGCAATATCTCCTGCTAATCAAGACATAGCTACATCGGATGCGATGAAG  706

Query  720   CTCGCGAAAGAAGTGGATCCAATAGGTGATAGAACGTTTGGAGTTTTGACAAAGTTAGAC  779
             ||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||
Sbjct  707   CTCGCAAAAGAAGTGGATCCAACAGGTGATAGAACGTTTGGAGTGCTGACAAAGTTAGAC  766

Query  780   TTAATGGACAAGGGAACTAATGCATTGGACGTTATC-AACGGAAGATCTTACAAGCTGAA  838
             ||||||||||| |||||||||||| ||||||||||| || ||||| ||||||| ||||||
Sbjct  767   TTAATGGACAAAGGAACTAATGCACTGGACGTTATCGAA-GGAAGGTCTTACAGGCTGAA  825

Query  839   ATATCCTTGGGTTGGGATAGTGAACCGTTCACAAGCCGACATTAATAAGAATGTCGACAT  898
             |||||||||||||||||||||||||||||||||||| || |||||||||||||| || ||
Sbjct  826   ATATCCTTGGGTTGGGATAGTGAACCGTTCACAAGCAGATATTAATAAGAATGTTGATAT  885

Query  899   GATGGTTGCAAGAAGGAAAGAGCGAGAGTACTTTGAAACCAGTCCTGACTATGGTCACTT  958
             ||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct  886   GATGGTTGCGAGAAGGAAAGAGCGAGAATACTTTGAAACCAGCCCTGACTATGGTCACTT  945

Query  959   AGCCACAAGAATGGGCTCAGAATATCTTGCAAAGCTCCTCTCTAAGCTCTTAGAATCTGT  1018
             ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct  946   AGCCACAAGAATGGGATCAGAATATCTTGCAAAGCTTCTCTCTAAGCTCTTAGAATCTGT  1005

Query  1019  TATAAGGTCACGTATTCCAAGTATCCTATCCTTGATAAACAACAACATCGAGGAACTCGA  1078
             ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct  1006  TATAAGGTCCCGTATTCCAAGTATCCTATCCTTGATCAACAACAACATCGAGGAACTCGA  1065

Query  1079  AAGAGAGTTAGACCAATTGGGCAGGCCTATCGCTATTGATGCTGGAGCTCAACTATACAC  1138
             |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct  1066  AAGAGAGTTAGACCAATTGGGCAGGCCTGTCGCGATTGATGCTGGAGCTCAACTATACAC  1125

Query  1139  TATCTTGGGAATGTGTAGAGCATTCGAAAAGATATTCAAAGAGCATTTGGATGGCGGGCG  1198
             |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct  1126  TATCTTGGGAATGTGTCGAGCATTTGAAAAGATATTCAAAGAGCATTTGGATGGCGGGCG  1185

Query  1199  TCCCGGAGGTGCACGGATCTATGGAATCTTTGACTACAATCTTCCAACAGCCATaaaaaa  1258
             ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||
Sbjct  1186  TCCTGGAGGTGCACGCATCTACGGAATCTTTGACTACAATCTTCCAACAGCCATTAAAAA  1245

Query  1259  aCTTCCATTTGATCGTCATCTTTCATTGCAAAGTGTTAAGAGAATTGTCTCAGAATCTGA  1318
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  1246  ACTTCCATTTGATCGTCATCTTTCATTGCAAAGTGTTAAGAGAATTGTATCAGAATCTGA  1305

Query  1319  TGGCTATCAACCTCACTTGATAGCACCAGAATTAGGTTATCGTCGTCTTATTGAAGGATC  1378
             ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct  1306  TGGCTATCAACCTCACTTGATAGCACCAGAATTGGGTTATCGTCGTCTCATTGAAGGATC  1365

Query  1379  CCTAAATCATTTTAGAGGTCCAGCTGAAGCTTCTGTGAATGCTATTCACCTTA-TCTTAA  1437
              |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||
Sbjct  1366  ACTAAATCATTTTAGAGGTCCAGCTGAAGCTTCTGTGAATGCTATTCAT-TTAATCTTAA  1424

Query  1438  AAGAGCTTGTAAGGAAAGCAATCGCAGAAACTGAGGAGCTAAAACGTTTCCCTTCACTAC  1497
             ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct  1425  AAGAGCTTGTAAGGAAAGCAATCTCAGAAACCGAGGAGCTAAAACGTTTCCCTTCACTAC  1484

Query  1498  AAATTGAGTTAGTTGCTGCAGCAAACTCATCATTAGACAAGTTTCGTGAAGAAAGCATGA  1557
             |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  1485  AAATTGAGTTAGTTGCTGCAGCAAACTCATCACTAGACAAGTTTCGTGAAGAAAGCATGA  1544

Query  1558  AGTCAGTTCTTAGATTAGTCGACATGGAATCTTCATATCTAACGGTTGACTTCTTTCGCA  1617
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  1545  AGTCAGTTCTTAGATTAGTCGACATGGAATCATCATATCTAACGGTTGACTTCTTTCGCA  1604

Query  1618  AGCTTCATGTAGAAAGCCAAAACATGTCTCTTTCTTCACCAACATCAGCAATA------G  1671
             ||||||||||||||||||||||| |||||||||||||||||||| || ||| |      |
Sbjct  1605  AGCTTCATGTAGAAAGCCAAAACGTGTCTCTTTCTTCACCAACAACAACAACAACAACAG  1664

Query  1672  ACCAATACGGTGATGGGCATTTCAGAAAGATAGCTTCAAATGTAGCTGCTTATATCAAGA  1731
             ||||||| ||||| || || ||||||||||||||||||||||| ||| ||||||||||||
Sbjct  1665  ACCAATATGGTGAAGGACAGTTCAGAAAGATAGCTTCAAATGTTGCTTCTTATATCAAGA  1724

Query  1732  TGGTTGCAGAGACACTTGTTAACACTATTCCTAAGGCTGTTGTTCATTGCCAAGTCAGAC  1791
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct  1725  TGGTTGCAGAGACACTTGTTAACACTATTCCTAAGGCTGTTGTTCATTGCCAAGTTAGAC  1784

Query  1792  AAGCGAAACTCTCTTTGCTTAATTACTTCTATGCACAGATTAGTCAGAGTCAGGGGAAAC  1851
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct  1785  AAGCGAAACTCTCTTTGCTTAATTACTTCTATGCACAGATCAGTCAGAGTCAGGGGAGAC  1844

Query  1852  GATTGGGACAGTTGCTAGATGAGAACCCGGCATTGATGGAAAGGAGAATGCAATGTGCAA  1911
             |  | ||||||||  |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct  1845  GGCTAGGACAGTTATTAGATGAGAATCCGGCATTGATGGAAAGGAGAGTGCAATGTGCAA  1904

Query  1912  AGAGGCTCGAGCTATACAAGAAGGCTAGAGATGAGATTGATGCAGCGGTTTGGGTTCGAT  1971
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1905  AGAGGCTCGAGCTATACAAGAAGGCTAGAGATGAGATTGATGCAGCGGTTTGGGTTCGAT  1964

Query  1972  GAACGAAGCCGGTTTGATTTTATTGGTTGACAT-ATTAAACCTTTTAAGTTGATAAACAG  2030
             ||  |||||||||||| ||||||||||| |||| | ||||||   |||||||||||||||
Sbjct  1965  GAT-GAAGCCGGTTTGGTTTTATTGGTTTACATGAATAAACCAACTAAGTTGATAAACAG  2023

Query  2031  ACAACTATTGTAGTACTTGTGGTTATCTCCGGTATAATCGTTG  2073
             |||| |||| ||||||||||||||||||| ||||||||| |||
Sbjct  2024  ACAATTATT-TAGTACTTGTGGTTATCTCGGGTATAATCATTG  2065


> Ahg486488 jgi|Araly1|486488|fgenesh2_kg.5__2480__AT3G60190.1
Length=2208

 Score = 1277 bits (691),  Expect = 0.0
 Identities = 1261/1530 (82%), Gaps = 64/1530 (4%)
 Strand=Plus/Plus

Query  129   ACGACAATGGAGAGTTTGATCGTGTTGA-TTAATACG-ATACAAAGAGCATGCACCGTAG  186
             ||||| |||||||||||||| | ||| | |||||| | ||||| |||||||| |||||| 
Sbjct  176   ACGACTATGGAGAGTTTGATTGGGTT-AGTTAATA-GAATACAGAGAGCATGTACCGTAC  233

Query  187   TCGGCGATC-ATGGCGG-CG-A-T---AGCAACGCTCTATC--TTCTCTATGGGAAGCTC  237
             |||| || | |||| ||  | | |   || |||||| | ||  |||||| ||||||||||
Sbjct  234   TCGGTGA-CTATGGTGGTGGAACTGGAAGTAACGCT-T-TCAATTCTCTCTGGGAAGCTC  290

Query  238   TTCCTTCCGTCGCCGTCGTTGGTGGCCAGAGTTCTGGTAAATCTTCGGTTCTAGAGAGTA  297
             ||||  ||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| |
Sbjct  291   TTCCAACCGTCGCCGTCGTCGGTGGTCAGAGTTCTGGGAAATCTTCAGTTCTTGAGAGCA  350

Query  298   TCGTCGGGAGAGATTTTCTTCCCAGAGGATCCGGTATTGTTACGAGACGGCCTTTGGTTT  357
             | || ||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || |
Sbjct  351   TAGTTGGGAGAGATTTTCTTCCTAGAGGATCTGGTATCGTTACCAGACGGCCTTTAGTGT  410

Query  358   TACAACTTCATAAGACTGAAAATGGAACAGAGGA-TAACGCAGAGTTTCTCCACCTTACC  416
             | || ||||||||||| ||  ||||||||||||| | | |||||||| || || ||| ||
Sbjct  411   TGCAGCTTCATAAGACGGATGATGGAACAGAGGAGT-ATGCAGAGTTCCTTCATCTTCCC  469

Query  417   AATAAAAAATTCACCA-ATTTCTCTTTGGTTAGAAAGGAGATTGAGGATGAGACTGATAG  475
             || ||  |||||| || ||||| |||||||| | ||||||||| ||||||||||||||||
Sbjct  470   AAGAAGCAATTCA-CAGATTTCGCTTTGGTTCGCAAGGAGATTCAGGATGAGACTGATAG  528

Query  476   AATCACTGGGAAGAACAAACAGATTTCTTCAATTCCTATTCACCTCAGTATTTTCTCTCC  535
             |||||| ||||||||||||||||| ||| || ||||||||||||||||||| | ||||||
Sbjct  529   AATCACAGGGAAGAACAAACAGATATCTCCAGTTCCTATTCACCTCAGTATCTACTCTCC  588

Query  536   CAATGTTGTGAATCTT-ACTCTCATTGATTTACCTGGTTTGACTAAAGTTGCTGTTGAAG  594
              |||||||||||| || || ||||||||||| || ||||| |||||||| |||||||| |
Sbjct  589   AAATGTTGTGAAT-TTGACCCTCATTGATTTGCCCGGTTTAACTAAAGTGGCTGTTGAGG  647

Query  595   GACAGCCAGAAACTATTGTTGAGGATATCGAATCCATGGTTCGCTCATACGTCGAAAAGC  654
             ||||||| ||||| |||| ||||||||| ||||||||||||||| |||| || || ||||
Sbjct  648   GACAGCCGGAAACCATTGCTGAGGATATTGAATCCATGGTTCGCACATATGTTGATAAGC  707

Query  655   CTAACTGTCTTATACTGGCAATATCTCCTGCTAATCAAGACATAGCTACATCCGACGCGA  714
             | || ||| | ||| |||| ||||||||||| || |||||||| || ||||| || || |
Sbjct  708   CCAATTGTATCATATTGGCTATATCTCCTGCCAACCAAGACATTGCCACATCGGATGCAA  767

Query  715   TGAAGCTCGCGAAAGAAGTGGATCCAATAGGTGATAGAACGTTTGGAGTT-TTGACAAAG  773
             | |||||||| ||||| || ||||||| |||||| || || ||||| ||| || || |||
Sbjct  768   TTAAGCTCGCAAAAGATGTTGATCCAACAGGTGAGAGGACATTTGGTGTTCTT-ACCAAG  826

Query  774   TTAGACTTAATGGACAAGGGAACTAATGCATTGGACGTT-ATCAACGGAAGATCTTACAA  832
             |||||||| |||||||| |||||||||||||| || |||  | || ||||||||||||| 
Sbjct  827   TTAGACTTGATGGACAAAGGAACTAATGCATTAGAAGTTCTTGAA-GGAAGATCTTACAG  885

Query  833   GCTGAAATATCCTTGGGTTGGGATAGTGAACCGTTCACAAGCCGACATTAATAAGAATGT  892
             |||| || |||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct  886   GCTGCAACATCCTTGGGTTGGGATAGTGAACCGTTCACAAGCAGATATTAATAAGAATGT  945

Query  893   CGACATGATGGTTGCAAGAAGGAAAGAGCGAGAGTACTTTGAAACCAGTCCTGACTATGG  952
             ||| |||||| |||||||| | || || ||||| || ||||| |||||| ||||||||||
Sbjct  946   CGATATGATGCTTGCAAGACGCAAGGAACGAGAATATTTTGACACCAGTTCTGACTATGG  1005

Query  953   TCACTTAGCCA-CAAGAATGGGCTCAGAATATCTTGCAAAGCTCCTCTCTAAGCTCTTAG  1011
             ||||||||||| ||| |||||| |||||||| || |||||||| |||||||||| ||| |
Sbjct  1006  TCACTTAGCCAGCAA-AATGGGTTCAGAATACCTGGCAAAGCTGCTCTCTAAGCACTTGG  1064

Query  1012  AATCTGTTATAAGGTCACGTATTCCAAGTATCCTATCCTTGATAAACAACAA-CATCGAG  1070
             | |||||||| ||| | |||||||||||||| |||||||| |||||||| || ||| || 
Sbjct  1065  AGTCTGTTATCAGGACCCGTATTCCAAGTATACTATCCTTAATAAACAA-AAGCATTGAA  1123

Query  1071  GAACTCGAAAGAGAGTTAGACC-AATTGGG-CAGGCCTATCGCTA-TTGATGCTGGAGCT  1127
             ||||| |||||||||||||| | ||| ||| | ||||| | || | |||||||||| |||
Sbjct  1124  GAACTTGAAAGAGAGTTAGATCGAAT-GGGTC-GGCCTGTTGC-AGTTGATGCTGGGGCT  1180

Query  1128  CAACTATACACTATCTTGG-GAATGTGTAGAGCATTCGAAAAGATATTCAAAGAGCATTT  1186
             |||||||||||||| |||| || ||||  | ||||| || ||||||||||| || ||| |
Sbjct  1181  CAACTATACACTATATTGGAGA-TGTGCCGTGCATTTGATAAGATATTCAAGGAACATCT  1239

Query  1187  GGATGGCGGGCGTCCCGGAGGTGCACGG-ATCTATGGAATCTTTGACTAC-AATCTTCCA  1244
             ||||||||||||||| || |||| || | ||||||||| |||||||| || || ||||||
Sbjct  1240  GGATGGCGGGCGTCCTGGTGGTG-ACCGTATCTATGGAGTCTTTGACAACCAA-CTTCCA  1297

Query  1245  ACAGC-CATaaaaaaaCTTCCATTTGATCGTCATCTTTCAT-TGCAAAGTGTTAAGAGAA  1302
              | || | ||||||  ||||| |||||||| |||||||| | | ||||| || |||| ||
Sbjct  1298  GCTGCACTTAAAAAG-CTTCCTTTTGATCGCCATCTTTC-TCTACAAAGCGTGAAGAAAA  1355

Query  1303  TTGTCTCAGAATCTGATGGCTATCAACCTCACTTGATAGCACCAGAATTAGG-TTATCGT  1361
             | || || ||  | ||||||||||||||||||||||| |||||||||  ||| |||||| 
Sbjct  1356  TCGTGTCCGAGGCAGATGGCTATCAACCTCACTTGATTGCACCAGAAC-AGGGTTATCGC  1414

Query  1362  CGTCTTATTGAAGGATCCCTAAATCATTTTAGAGGTCCAGCTGAAGCTTCTGTGAATGCT  1421
             || || || |||||  | ||   | | |||||||||||||| |||||||||||| |||||
Sbjct  1415  CGCCTAATCGAAGGGGCGCTGGGTTACTTTAGAGGTCCAGCCGAAGCTTCTGTGGATGCT  1474

Query  1422  ATTCACCTTAT--CTTAAAAGAGCTTGTAAGGAAAG-CAATCGCAGAAACTGAGGAGCTA  1478
              ||||  ||||  ||| ||||||||||| ||||| | ||||  |||||||||||||||||
Sbjct  1475  GTTCA--TTATGTCTTGAAAGAGCTTGTGAGGAA-GTCAATATCAGAAACTGAGGAGCTA  1531

Query  1479  AAACGTTTCCCTTCACTACAAATTGAGTTAGTTGCTGCAGC-AA-A-CTCATCATTAGAC  1535
             || |||||||||||||| ||| | ||| | | ||| ||||| || | |||  | || || 
Sbjct  1532  AAGCGTTTCCCTTCACTGCAAGTCGAGCTCGCTGCAGCAGCCAATAGCTC--C-TTGGAG  1588

Query  1536  AAGTTTC-GTGAAGAAAGCATGAAGTCAGTTCTTAGA-TTAGTCGACATGGAATCTTCAT  1593
             || || | | |||||||||| |||||| ||| || || || || || ||||||||| | |
Sbjct  1589  AAATT-CAGGGAAGAAAGCAAGAAGTCGGTTATTCGACTT-GTTGATATGGAATCTGCGT  1646

Query  1594  ATCTAACGGTTGACTTCTTTCGCAAGCTTC  1623
             ||||||| | ||| ||||| || || ||||
Sbjct  1647  ATCTAACAGCTGAGTTCTTCCGGAAACTTC  1676



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 80598958420


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5